View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18757_low_39 (Length: 336)
Name: NF18757_low_39
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18757_low_39 |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 11 - 297
Target Start/End: Original strand, 37403872 - 37404158
Alignment:
| Q |
11 |
aagaaaaagacagatcaaataaataaaaatagatgatataagcaatgcaagcattgaatatacaaataactaacatgtcattgtcatgtggggctgggtt |
110 |
Q |
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| T |
37403872 |
aagaaaaagacagatcaaataaatacaaatagatgatataagcaatgcaggcattgaatatacaaataactaacatgtcattgtcatgtggggctgggtt |
37403971 |
T |
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| Q |
111 |
gattccttctgttacataattttaaggtgactagttggctagggtgaaacacaatgaatgatacctctcatgtgataaggtcatcatccattgaaaatga |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
37403972 |
gattccttctgttacataattttaaggtgactagttggctagggtgaaacacaatgaatgatacctctcatgtgataagatcatcatccattgaaaatga |
37404071 |
T |
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| Q |
211 |
gagagaaagagagtatacaatgaaatagaaatataaatgagattttaaggatagagatttcagaaacatgagagaacgtggaaaaaa |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37404072 |
gagagaaagagagtatacaatgaaatagaaatataaatgagattttaaggatagagatttcagaaacatgagagaacgtggaaaaaa |
37404158 |
T |
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