View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18757_low_44 (Length: 307)

Name: NF18757_low_44
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18757_low_44
NF18757_low_44
[»] chr4 (20 HSPs)
chr4 (1-283)||(37394726-37395008)
chr4 (1-283)||(44050603-44050884)
chr4 (47-283)||(3407762-3407998)
chr4 (49-283)||(10374355-10374589)
chr4 (47-283)||(19069514-19069750)
chr4 (47-283)||(49564156-49564392)
chr4 (49-283)||(10422931-10423165)
chr4 (63-283)||(4774128-4774347)
chr4 (47-283)||(38460739-38460975)
chr4 (1-283)||(18578904-18579182)
chr4 (1-283)||(24415440-24415720)
chr4 (69-283)||(11506617-11506831)
chr4 (47-150)||(50904819-50904922)
chr4 (70-215)||(6186995-6187140)
chr4 (63-183)||(30043046-30043166)
chr4 (1-140)||(51642288-51642423)
chr4 (2-48)||(3407983-3408029)
chr4 (57-197)||(31598814-31598954)
chr4 (1-38)||(50904917-50904954)
chr4 (1-33)||(10423167-10423199)
[»] chr8 (26 HSPs)
chr8 (1-283)||(43376802-43377084)
chr8 (1-283)||(2124462-2124744)
chr8 (2-283)||(31959570-31959851)
chr8 (47-283)||(23924279-23924515)
chr8 (47-283)||(30301449-30301685)
chr8 (47-283)||(7344079-7344315)
chr8 (47-283)||(8419719-8419955)
chr8 (47-283)||(32375966-32376202)
chr8 (47-283)||(39771-40007)
chr8 (47-283)||(35962621-35962857)
chr8 (47-283)||(22587965-22588201)
chr8 (1-283)||(7171840-7172118)
chr8 (70-283)||(41744160-41744373)
chr8 (48-279)||(22661101-22661332)
chr8 (47-283)||(43679710-43679951)
chr8 (1-219)||(4867380-4867594)
chr8 (47-146)||(39751374-39751473)
chr8 (47-127)||(20548938-20549018)
chr8 (138-237)||(39751659-39751758)
chr8 (100-228)||(31281179-31281305)
chr8 (1-48)||(39751342-39751389)
chr8 (1-48)||(22588186-22588233)
chr8 (54-161)||(30972519-30972626)
chr8 (2-48)||(20549003-20549049)
chr8 (6-48)||(7344300-7344342)
chr8 (1-38)||(35962589-35962626)
[»] chr7 (22 HSPs)
chr7 (1-283)||(19044574-19044856)
chr7 (1-283)||(20709780-20710062)
chr7 (47-283)||(15069873-15070109)
chr7 (47-283)||(18109316-18109552)
chr7 (47-283)||(42503361-42503597)
chr7 (47-283)||(43619994-43620230)
chr7 (47-283)||(47742512-47742748)
chr7 (47-283)||(604093-604329)
chr7 (47-283)||(30790529-30790765)
chr7 (47-283)||(45767383-45767619)
chr7 (1-283)||(47064817-47065099)
chr7 (47-283)||(34622812-34623048)
chr7 (70-283)||(29592839-29593052)
chr7 (1-283)||(10705529-10705807)
chr7 (8-283)||(12111504-12111773)
chr7 (1-48)||(34622780-34622827)
chr7 (1-48)||(47742733-47742780)
chr7 (2-48)||(15070094-15070140)
chr7 (2-48)||(18109537-18109583)
chr7 (2-48)||(42503582-42503628)
chr7 (6-48)||(30790750-30790792)
chr7 (6-48)||(45767604-45767646)
[»] chr1 (41 HSPs)
chr1 (1-283)||(50113589-50113871)
chr1 (33-283)||(12643505-12643755)
chr1 (47-283)||(44469534-44469770)
chr1 (47-283)||(9710891-9711127)
chr1 (47-283)||(37018919-37019155)
chr1 (47-283)||(3944289-3944525)
chr1 (47-283)||(6558215-6558451)
chr1 (47-283)||(30909552-30909788)
chr1 (47-283)||(3993365-3993601)
chr1 (47-283)||(29352547-29352783)
chr1 (47-283)||(13633395-13633631)
chr1 (47-283)||(20353458-20353694)
chr1 (47-283)||(38771945-38772181)
chr1 (47-283)||(5081887-5082123)
chr1 (48-283)||(7966298-7966538)
chr1 (1-283)||(46978757-46979049)
chr1 (47-283)||(8459271-8459507)
chr1 (63-284)||(1655602-1655823)
chr1 (47-283)||(51666189-51666425)
chr1 (1-283)||(13177649-13177927)
chr1 (47-283)||(38690223-38690458)
chr1 (1-283)||(4517917-4518207)
chr1 (1-283)||(36072644-36072922)
chr1 (8-283)||(33168192-33168463)
chr1 (63-283)||(19495382-19495603)
chr1 (60-247)||(25039640-25039827)
chr1 (48-237)||(5141439-5141628)
chr1 (216-283)||(41456752-41456819)
chr1 (47-101)||(15051053-15051107)
chr1 (1-48)||(37019140-37019187)
chr1 (2-48)||(5082108-5082154)
chr1 (2-48)||(13633616-13633662)
chr1 (2-48)||(15051092-15051138)
chr1 (2-48)||(30909773-30909819)
chr1 (2-48)||(44469755-44469801)
chr1 (1-48)||(7966265-7966312)
chr1 (6-48)||(3993586-3993628)
chr1 (6-48)||(20353679-20353721)
chr1 (8-48)||(51666410-51666450)
chr1 (1-43)||(46886137-46886179)
chr1 (1-30)||(8459239-8459268)
[»] chr3 (21 HSPs)
chr3 (1-283)||(6489610-6489893)
chr3 (2-283)||(14402528-14402809)
chr3 (2-283)||(4002014-4002295)
chr3 (1-283)||(46989794-46990076)
chr3 (2-283)||(36813120-36813401)
chr3 (47-283)||(2743769-2744005)
chr3 (47-283)||(9426919-9427155)
chr3 (47-283)||(13743580-13743816)
chr3 (47-283)||(30943505-30943741)
chr3 (47-283)||(3952737-3952973)
chr3 (47-283)||(8156823-8157059)
chr3 (47-279)||(50957206-50957438)
chr3 (47-283)||(6744849-6745085)
chr3 (47-283)||(48246725-48246961)
chr3 (49-283)||(21952115-21952349)
chr3 (47-255)||(2857533-2857741)
chr3 (1-283)||(67155-67433)
chr3 (47-112)||(7841409-7841474)
chr3 (6-48)||(3952958-3953000)
chr3 (6-48)||(6745070-6745112)
chr3 (1-33)||(21952081-21952113)
[»] chr2 (37 HSPs)
chr2 (1-283)||(24601921-24602201)
chr2 (1-283)||(24611913-24612193)
chr2 (1-283)||(9659563-9659847)
chr2 (1-283)||(1096851-1097133)
chr2 (47-283)||(3795664-3795900)
chr2 (1-283)||(81773-82055)
chr2 (1-283)||(439333-439615)
chr2 (1-283)||(41052903-41053183)
chr2 (47-283)||(5351254-5351490)
chr2 (47-283)||(10620288-10620524)
chr2 (47-283)||(41181724-41181960)
chr2 (47-283)||(41564013-41564249)
chr2 (47-283)||(209299-209535)
chr2 (47-283)||(7266967-7267203)
chr2 (51-283)||(39797963-39798195)
chr2 (47-283)||(28342836-28343073)
chr2 (47-283)||(24753547-24753783)
chr2 (48-283)||(45479345-45479579)
chr2 (1-282)||(12905801-12906078)
chr2 (63-283)||(43944031-43944251)
chr2 (54-283)||(1150554-1150783)
chr2 (1-283)||(41004808-41005086)
chr2 (137-283)||(38949709-38949855)
chr2 (47-140)||(38950232-38950325)
chr2 (47-107)||(18000547-18000607)
chr2 (57-228)||(25613526-25613697)
chr2 (1-48)||(41181692-41181739)
chr2 (2-48)||(7267188-7267234)
chr2 (2-48)||(24753768-24753814)
chr2 (2-48)||(38950310-38950356)
chr2 (6-48)||(5351475-5351517)
chr2 (6-48)||(41564234-41564276)
chr2 (1-38)||(28342804-28342841)
chr2 (8-42)||(43943980-43944014)
chr2 (136-197)||(43668499-43668560)
chr2 (2-48)||(3207030-3207076)
chr2 (2-36)||(39798194-39798228)
[»] chr6 (21 HSPs)
chr6 (1-283)||(7537468-7537750)
chr6 (1-279)||(2051309-2051587)
chr6 (47-283)||(25140628-25140865)
chr6 (47-283)||(1608608-1608844)
chr6 (47-283)||(13382955-13383191)
chr6 (47-283)||(29286516-29286752)
chr6 (1-283)||(28362240-28362522)
chr6 (1-283)||(29667346-29667624)
chr6 (47-283)||(31150588-31150824)
chr6 (48-283)||(23959205-23959443)
chr6 (47-261)||(18609778-18609992)
chr6 (48-283)||(2259400-2259634)
chr6 (48-209)||(34230795-34230956)
chr6 (1-48)||(18609977-18610024)
chr6 (1-48)||(29286484-29286531)
chr6 (1-48)||(31150809-31150856)
chr6 (47-101)||(18351348-18351402)
chr6 (48-208)||(20448386-20448545)
chr6 (1-48)||(26702456-26702503)
chr6 (2-48)||(18351387-18351433)
chr6 (2-48)||(25140850-25140896)
[»] scaffold0201 (1 HSPs)
scaffold0201 (10-283)||(22691-22964)
[»] chr5 (27 HSPs)
chr5 (1-283)||(34122806-34123088)
chr5 (2-283)||(1039315-1039595)
chr5 (47-283)||(7796891-7797127)
chr5 (47-283)||(27863717-27863953)
chr5 (47-283)||(13563955-13564191)
chr5 (47-283)||(14280501-14280737)
chr5 (47-283)||(28882302-28882538)
chr5 (47-283)||(37814896-37815132)
chr5 (47-283)||(38856029-38856265)
chr5 (51-283)||(11029325-11029557)
chr5 (47-283)||(25890308-25890544)
chr5 (60-283)||(33994672-33994895)
chr5 (1-283)||(24050308-24050588)
chr5 (47-283)||(4196830-4197064)
chr5 (1-283)||(24053435-24053712)
chr5 (47-283)||(7017825-7018048)
chr5 (82-283)||(28387779-28387979)
chr5 (1-283)||(30352702-30352980)
chr5 (1-192)||(25877900-25878089)
chr5 (47-190)||(34079747-34079890)
chr5 (112-279)||(43179392-43179559)
chr5 (48-185)||(6267789-6267925)
chr5 (1-48)||(7796859-7796906)
chr5 (2-48)||(34079875-34079921)
chr5 (6-48)||(14280722-14280764)
chr5 (8-48)||(43179644-43179684)
chr5 (2-36)||(11029292-11029326)
[»] scaffold0494 (2 HSPs)
scaffold0494 (47-283)||(4849-5085)
scaffold0494 (2-48)||(5070-5116)
[»] scaffold0116 (2 HSPs)
scaffold0116 (47-283)||(15478-15714)
scaffold0116 (2-48)||(15699-15745)
[»] scaffold0169 (1 HSPs)
scaffold0169 (92-283)||(10787-10978)
[»] scaffold0794 (1 HSPs)
scaffold0794 (69-283)||(1274-1488)
[»] scaffold0219 (2 HSPs)
scaffold0219 (1-160)||(19743-19902)
scaffold0219 (158-283)||(19457-19582)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-283)||(21919-22188)
[»] scaffold0513 (1 HSPs)
scaffold0513 (47-134)||(8513-8600)


Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 37395008 - 37394726
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37395008 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 37394909  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  37394908 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataa 37394809  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  37394808 gccaaggcatacaacttgccgttttccatgcgtattcatctttatcttctcctaggtctatgcatggcttttgaccaaacaag 37394726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 44050884 - 44050603
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44050884 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttg 44050785  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  44050784 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataa 44050685  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || ||  |||||||||||  ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  44050684 gccaa-acatatagcttgttgttttccatgcgtatttgtctctatcttctcctaggtctatgcatggcatttgaccaaacaag 44050603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 3407998 - 3407762
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3407998 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 3407899  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  3407898 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgtgtattcatctctatc 3407799  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  3407798 ttctcctaggtctatgcatggcatttgaccaaacaag 3407762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 49 - 283
Target Start/End: Original strand, 10374355 - 10374589
Alignment:
Q  49 gtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatta 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10374355 gtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatatta 10374454  T
Q  149 tcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatctt 248  Q
    |||||||||||||| ||||| ||||||| || |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  10374455 tcttccaccatatttcgaaacataaatctgatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctctatctt 10374554  T
Q  249 ctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||    
T  10374555 ctcctaggtctatgcatggcatttgaccaaacaag 10374589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 19069514 - 19069750
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  19069514 aagtgtccataattaaactactcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatgtataatatat 19069613  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19069614 tatcttccaccatattccgaaacataaacccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 19069713  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  19069714 ttctcctaggtctatgcatggcatttgaccaaacaag 19069750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 49564156 - 49564392
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  49564156 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 49564255  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  49564256 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 49564355  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  49564356 ttctcctaggtctatgcatggcatttgaccaaacaag 49564392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 49 - 283
Target Start/End: Complemental strand, 10423165 - 10422931
Alignment:
Q  49 gtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatta 148  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10423165 gtgtccataattaaacaactcattacatatcattagattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatatta 10423066  T
Q  149 tcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatctt 248  Q
    |||||||||||||||||||| ||||||||||||||||  ||| | ||||||||| ||| ||||||||||| ||||||||||| |||||| ||||||||||    
T  10423065 tcttccaccatattccgaaacataaatccgacgtcgcaatcgccgcgaataagccaagacatatagcttgtcgttttccatgtgtattcgtctctatctt 10422966  T
Q  249 ctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||  |||||||||||||||    
T  10422965 ctcctaggtctatgcatgaaatttgaccaaacaag 10422931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 63 - 283
Target Start/End: Complemental strand, 4774347 - 4774128
Alignment:
Q  63 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatatt 162  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  4774347 acaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatatt 4774248  T
Q  163 ccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatg 262  Q
    |||||| ||||||||||||||||| ||||| | ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4774247 ccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatg 4774148  T
Q  263 catggcatttgaccaaacaag 283  Q
    || | |||||| |||||||||    
T  4774147 cacgacatttg-ccaaacaag 4774128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 38460739 - 38460975
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | |||||||||||| ||| |||||||| |||||||||||    
T  38460739 aagtgtccataattaaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatgcaacaaacatacatatataatatat 38460838  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| ||||||||||||| |||| |||||||| |||||||| |||||   ||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  38460839 tattttccaccatattctgaaacataaatccaacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgcattcatctctatc 38460938  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  38460939 ttctcctaggtatatgcatgacatttgaccaaacaag 38460975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 18578904 - 18579182
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| |||||||||||||||||| |||||| |||||||||||||||    | | | ||||  ||||||||||||||||||||||||||||| || |||    
T  18578904 cacaaaagtttgaaattcatcaaaatgttacatagtgtccataattaaa---caacacatta--caactcattacacatcattaaattaaatcacttctt 18578998  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||   |||     
T  18578999 acattcaacgcaattgcatatagaactaacatacatatataatatattatcttctaccatattccgaaacataaattcgacgtcgctatcgtcttcaatt 18579098  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| |||||||    
T  18579099 agccaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcataggtctatgcatgacatttgacaaaacaag 18579182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 24415440 - 24415720
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||    | | | ||||  |||||||||||| |||||||||||||||||||||||    
T  24415440 cacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaa---caacacatta--caactcattacatatcattaaattaaatccctactt 24415534  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||| | |||||||| |||||   ||||    
T  24415535 acattcaacacaattgcatatggaacgaacatacatatataatatattattttccatcatattccgaaacataaatgcaacgtcgctatcgtcttcaata 24415634  T
Q  200 agctaaggc--atatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||  |||||  |||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24415635 agtcaaggcatatatagcttgtcgttttccatgtgtattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 24415720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 69 - 283
Target Start/End: Complemental strand, 11506831 - 11506617
Alignment:
Q  69 cattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaa 168  Q
    ||||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||    
T  11506831 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 11506732  T
Q  169 aataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggc 268  Q
     ||||||||||||||||| | |||   ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  11506731 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatgac 11506632  T
Q  269 atttgaccaaacaag 283  Q
    |||||||||||||||    
T  11506631 atttgaccaaacaag 11506617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 50904922 - 50904819
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  50904922 aagtgttcataattaaacaattcatttcacatcattaaattaaatccctacttacattcaacacaattgcatatggaacaaacatacaaatataatatat 50904823  T
Q  147 tatc 150  Q
    ||||    
T  50904822 tatc 50904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 6186995 - 6187140
Alignment:
Q  70 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaa 169  Q
    |||||| |||||||||||||||| ||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||     
T  6186995 attacatatcattaaattaaatctctactgacattctacgcatttgcatatggaacgaacatacatatataatatattatcttccaccatattgctaaac 6187094  T
Q  170 ataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagc 215  Q
    |||||||| | |||||| |||||  |||||||| ||| || |||||    
T  6187095 ataaatccaatgtcgctatcgtcgtgaataagccaagacacatagc 6187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 30043166 - 30043046
Alignment:
Q  63 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatatt 162  Q
    ||||| ||||||| ||| |||||| ||||| ||  | |||||| | | | ||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  30043166 acaacacattacatatcgttaaatgaaatctctggtgacattctatgaagttgcaaatggaacgaaaatacaaatataatatattatcttccaccatatt 30043067  T
Q  163 ccgaaaaataaatccgacgtc 183  Q
    | |||| ||||||||||||||    
T  30043066 ctgaaacataaatccgacgtc 30043046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 51642288 - 51642423
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    | | | ||||  |||||||||||| |||||||| ||||||||| ||||    
T  51642288 cacaaaagtttgaaattcatcaaaacgttacaaattgtccataattaaa---caacacatta--caactcattacatatcattaagttaaatcccaactt 51642382  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatata 140  Q
    ||||||| | ||||| ||||| ||||||||||||| |||||    
T  51642383 acattcatcacaattacatatagaacgaacatacatatata 51642423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 3408029 - 3407983
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  3408029 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 3407983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 31598814 - 31598954
Alignment:
Q  57 aattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccac 156  Q
    |||||| |||||||||||| | ||||| || ||||| ||||| |||||| |||||  ||||  | |||||| || | | |||||||||||||| ||| ||    
T  31598814 aattaagcaactcattacataacattatatgaaatctctactgacattctacgcacatgcagttagaacgaccacaaatatataatatattattttcaac 31598913  T
Q  157 catattccgaaaaataaatccgacgtcgctgtcgtcacgaa 197  Q
    |||||  | ||| |||||||  | |||||||||||||||||    
T  31598914 catatgtctaaacataaatcttatgtcgctgtcgtcacgaa 31598954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 50904954 - 50904917
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgt 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  50904954 cacaaacgtttgaaattcatcaaaacgatacaaagtgt 50904917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10423199 - 10423167
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  10423199 cacaaacgtttgaaattcatcaaaacgttacaa 10423167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 43377084 - 43376802
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43377084 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccttaattaagtgtccataattaaacaactcattacacatcattaaattaaattcctactta 43376985  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||| |||||||    
T  43376984 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcactatcgtcgcgaataa 43376885  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
     | || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43376884 accaatgcatatagcttgccgttttccatgcgtattcgtctctatcttctcctaggtctatgcatggcatttgaccaaacaag 43376802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 2124462 - 2124744
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2124462 cacaaacatttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaagtccctactta 2124561  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||| | |||||| | ||| |||||||    
T  2124562 cattcaacgcaattgcatatggaacgaaaatacatatataatatattatcttccaccatattccgaaacataaatccaaagtcgctattgtcgcgaataa 2124661  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  2124662 gcaaaggcatatagcttgccgttttccatgcgtattcgtctctatcttctcctaggtctatgcatgacatttgaccaaacaag 2124744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 283
Target Start/End: Complemental strand, 31959851 - 31959570
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttac 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31959851 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaattgtccataattaaacaactcattacacatcattaaattaaatccatacttac 31959752  T
Q  102 attcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataag 201  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||| ||||||||    
T  31959751 attcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccaaaacataaatccgacgtcgccgtcgtcgcgaataag 31959652  T
Q  202 ctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| |||||||||||||||    
T  31959651 caaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcctacgtttatgcatgggatttgaccaaacaag 31959570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 23924279 - 23924515
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  23924279 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaactgcatatggaacgaacatacatatataatatat 23924378  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  23924379 tattttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 23924478  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  23924479 ttctcctaggtctatgcatggcatttgaccaaacaag 23924515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 30301449 - 30301685
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  30301449 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 30301548  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30301549 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 30301648  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  30301649 ttctcctaggtctatgcatggcatttgaccaaacaag 30301685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 7344315 - 7344079
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  7344315 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 7344216  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| ||||||||||||| || |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  7344215 tgtcttccaccatattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 7344116  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  7344115 ttctcctaggtctatgcatggcatttgaccaaacaag 7344079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 8419719 - 8419955
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||    
T  8419719 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacgtacatatataatatat 8419818  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  8419819 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 8419918  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  8419919 ttctcctaggtctatgcatggcatttgaccaaacaag 8419955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 32375966 - 32376202
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  32375966 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 32376065  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| ||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  32376066 tgtcttccaccatattccgaaacataaatccgacgtcgccatcgtcgcgaataagcaaaggcatatagcttgccgtttcccatgcgtattcatctctatc 32376165  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  32376166 ttctcctaggtctatgcatggcatttgaccaaacaag 32376202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 39771 - 40007
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39771 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 39870  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| |||||||||||||||||| ||||||||||| |||| |||||  ||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||    
T  39871 tattttccaccatattccgaaacataaatccgacatcgccgtcgttgcgaataagcaaagacatatagcttgtcgttttccatgcgtattcatctctatc 39970  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  39971 ttctcctaagtctatgcatgacatttgaccaaacaag 40007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 35962621 - 35962857
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  35962621 aagtgtgcataattaaacaactcattgcacatcattaaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatat 35962720  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||| |||||||     
T  35962721 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctctata 35962820  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||| ||||||||||||||||    
T  35962821 ttctcctaggtctatgcatgacatttgaccaaacaag 35962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 22588201 - 22587965
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  22588201 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatat 22588102  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||| | ||| ||||||||||||||||| |||||   ||| ||| ||| |||||||||||||||||||||||||||||| |||| ||     
T  22588101 tatcttccaccatatttcaaaacataaatccgacgtcgctatcgtcttcaattagccaagacatatagcttgccgttttccatgcgtattcatctccatt 22588002  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||| ||||||||||||||||||||    
T  22588001 ttctcctaggtctatgtatggcatttgaccaaacaag 22587965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 7172118 - 7171840
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||| ||||||||||| |||||||||||||||    | | | ||||  ||||||| ||||||||||||||||||||| ||||||    
T  7172118 cacaaaagtttgaaattcatgaaaacgttacatagtgtccataattaaa---caacacatta--caactcagtacacatcattaaattaaatctctactt 7172024  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||| ||||| ||||||    
T  7172023 acattcaatgcaattgcatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaata 7171924  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| ||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  7171923 agccaaggcatatagcttgccattttccatgcgtattcatctctatcttcctctaggtctatgcatggcatttgaccaaacaag 7171840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 70 - 283
Target Start/End: Original strand, 41744160 - 41744373
Alignment:
Q  70 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaa 169  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||     
T  41744160 attacacatcattaaattaagtccctacttacattcaacgcaattgcatatggagcgaatatacatatataatatattatcttccaccatattccgaaat 41744259  T
Q  170 ataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggca 269  Q
    ||||||||||||||||| |||||| |||||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41744260 ataaatccgacgtcgctatcgtcatgaataagccaaggcatataacttgtcgttttccatgcgtattcatctctatcttctcctaggtctatgcatggca 41744359  T
Q  270 tttgaccaaacaag 283  Q
    ||||||||||||||    
T  41744360 tttgaccaaacaag 41744373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 48 - 279
Target Start/End: Complemental strand, 22661332 - 22661101
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||| ||||| ||||||  |||| |||||||||||||||||||||| |||||||||||     
T  22661332 agtgtccataattaaacaacacattacatatcgttaaattaaatctctactgacattctgcgcagttgcatatggaacgaacatacatatataatatatc 22661233  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatct 247  Q
    ||||||||||||||||||||| ||| | ||||||||||| |||||  |||||||| ||||||||| |||||||||||||||||| ||||| |||||||||    
T  22661232 atcttccaccatattccgaaacatagacccgacgtcgctatcgtcgtgaataagccaaggcatatggcttgccgttttccatgcatattcatctctatct 22661133  T
Q  248 tctcctaggtctatgcatggcatttgaccaaa 279  Q
    ||||||||||||||||||||||| ||||||||    
T  22661132 tctcctaggtctatgcatggcatctgaccaaa 22661101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 43679710 - 43679951
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  43679710 aagtgttcataattaaacaactcattacacatcattatattaaatccctgcttacattcatcacaattgcatatggaacgaacatacatatataatatat 43679809  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctat- 245  Q
    ||| |||||||||||||||||| ||||||| |||||| || |||||   ||||||  |||||||||| |||| |||||||||||||| ||| |||||||     
T  43679810 tattttccaccatattccgaaacataaatctgacgtctctatcgtctttaataagtcaaggcatataacttgtcgttttccatgcgtgttcatctctatt 43679909  T
Q  246 ----cttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
         |||||||||||||||||||| ||||||||||||||||    
T  43679910 agaaattctcctaggtctatgcatgacatttgaccaaacaag 43679951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 4867594 - 4867380
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||| ||||| ||| |||||||||||    | | | ||||  |||||||||||  |||||||||||||||||||||||    
T  4867594 cacaaaagtttgaaattcatcaaaacattacatagtctccataattaaa---caacagatta--caactcattacttatcattaaattaaatccctactt 4867500  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||| |||||||||| ||||||| ||||||||||||||| | || || ||||||    
T  4867499 acattcaacgcaattggatatggaacgaacatacgtatataatatattattttccaccataatccgaaacataaatccgacgtcgttatcatctcgaata 4867400  T
Q  200 agctaaggcatatagcttgc 219  Q
    ||| || ||| |||| ||||    
T  4867399 agccaatgcacataggttgc 4867380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 39751374 - 39751473
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  39751374 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgtaattgcatatggaacgaacatacatatataatatat 39751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 20549018 - 20548938
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacga 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20549018 aagtgtccataattaaacaactcattacacatcattaaattaaatccttacttacattcaacgcaattgcatatggaacga 20548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 39751659 - 39751758
Alignment:
Q  138 ataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattc 237  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||    
T  39751659 ataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagtttgccgttttccatgcgtattc 39751758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 228
Target Start/End: Original strand, 31281179 - 31281305
Alignment:
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    |||||| |||||  |||| |||||||||||||| | |||||||||||||||||| ||||||||| |||| |||||||| ||||  || ||||||||||||    
T  31281179 acattctacgcacgtgcagatggaacgaacataaagatataatatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaata 31281276  T
Q  200 agctaaggcatatagcttgccgttttcca 228  Q
    ||| || || ||||  | |||||||||||    
T  31281277 agccaatgcttataaatcgccgttttcca 31281305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39751342 - 39751389
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39751342 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 39751389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22588233 - 22588186
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22588233 cacaaacgtttgaaattgatcaaaacgttacaaagtgtccataattaa 22588186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 30972626 - 30972519
Alignment:
Q  54 cataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttc 153  Q
    |||||||||||||| ||||||||||||||| || ||||  |||   |||||| |||||  |||| ||||||| |||| ||| ||||||||||||||||||    
T  30972626 cataattaaacaacacattacacatcattacataaaatatctatcgacattctacgcatgtgcaaatggaacaaacacacatatataatatattatcttc 30972527  T
Q  154 caccatat 161  Q
     |||||||    
T  30972526 aaccatat 30972519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 20549049 - 20549003
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20549049 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 20549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 7344342 - 7344300
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  7344342 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 7344300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35962589 - 35962626
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgt 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35962589 cacaaacgtttgaaattcatcaaaacgttacaaagtgt 35962626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 19044574 - 19044856
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  19044574 cacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattacacatcattaaattaaatctctactta 19044673  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| |||||||    
T  19044674 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataa 19044773  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19044774 gccaaggcatataacttgccgttttccatgcatattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 19044856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 20710062 - 20709780
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  20710062 cacaaacgtttgaaattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattacacatcattaaattaaatctctactta 20709963  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| |||||||    
T  20709962 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatctgacgtcgctatcgtcgcgaataa 20709863  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20709862 gccaaggcatataacttgccgttttccatgcatattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 20709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 15070109 - 15069873
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15070109 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 15070010  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  15070009 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 15069910  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  15069909 ttctcctaggtctatgcatggcatttgaccaaacaag 15069873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 18109552 - 18109316
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18109552 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 18109453  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||     
T  18109452 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctata 18109353  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  18109352 ttctcctaggtctatgcatggcatttgaccaaacaag 18109316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 42503597 - 42503361
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  42503597 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatat 42503498  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  42503497 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatgtagcttgccgttttccatgcgtattcatctctatc 42503398  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  42503397 ttctcctaggtctatgcatggcatttgaccaaacaag 42503361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 43619994 - 43620230
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  43619994 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 43620093  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  43620094 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 43620193  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  43620194 ttctcctaggtctatgcatggcatttgaccaaacaag 43620230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 47742748 - 47742512
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47742748 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 47742649  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  47742648 tatcttccaccatattccgaaacataaatccgacgtcgccatcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctctatc 47742549  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  47742548 ttctcctaggtctatgtatgacatttgaccaaacaag 47742512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 604093 - 604329
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  604093 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatat 604192  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  604193 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 604292  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||  ||||||||||||||||||||||||||||||    
T  604293 ttctcaaaggtctatgcatggcatttgaccaaacaag 604329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 30790765 - 30790529
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  30790765 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 30790666  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  30790665 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctctatc 30790566  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  30790565 ttctcctaggtctatgcatggcatttgaccaaacaag 30790529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 45767619 - 45767383
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  45767619 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 45767520  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  45767519 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 45767420  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||| ||||||||||||||||    
T  45767419 ttctcctaggtctatgcatgacatttgaccaaacaag 45767383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 47065099 - 47064817
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  47065099 cacaaaagtttgaaattcatcaaaatgttacaaagtatccataattaaatgtccataattaaacaactcattacacatgattatattaaatccctactta 47065000  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||  ||||||||| || ||   |||||    
T  47064999 cattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcgaaacataaatttgacgtcgctatcatctttaataa 47064900  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
     | |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  47064899 accaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcataggtctatgcatgacatttgaccaaacaag 47064817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 34622812 - 34623048
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  34622812 aagtgtccataattaaacaactcattacacatcattaaattaaacttctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatat 34622911  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  34622912 tatcttccatcatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctttatc 34623011  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  34623012 ttctcctaggtttattcatggcatttgaccaaacaag 34623048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 70 - 283
Target Start/End: Original strand, 29592839 - 29593052
Alignment:
Q  70 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaa 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||     
T  29592839 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatgtattatcttccaccatattccgaaac 29592938  T
Q  170 ataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggca 269  Q
    ||||||| ||||||||| ||||  ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  29592939 ataaatctgacgtcgctatcgttgcgaataagccaaggcatataacttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatgaca 29593038  T
Q  270 tttgaccaaacaag 283  Q
    ||||||||||||||    
T  29593039 tttgaccaaacaag 29593052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 10705529 - 10705807
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| |||| ||||||||||||| |||||| |||||||||||||||    | ||| ||||  ||||||||||||||||| ||||||||||| ||||||    
T  10705529 cacaaaagtttaaaattcatcaaaatgttacatagtgtccataattaaa---caatacatta--caactcattacacatcaataaattaaatctctactt 10705623  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||   |||     
T  10705624 acattcaacgcaattgcatatagaacgaacatacatatataatatatcatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaatt 10705723  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  10705724 agccaaggcatatagcttgtcgttttccatgcgtattcatctgtatcttctcctaggtctatgcatgtcatttgaccaaacaag 10705807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 8 - 283
Target Start/End: Original strand, 12111504 - 12111773
Alignment:
Q  8 gtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctacttacattca 106  Q
    |||| |||||||||||||||||| ||| |||||||||||||    | ||| ||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  12111504 gtttaaaattcatcaaaacgttataaattgtccataattaaa---caatacatta--caactcattacatatcattaaattaaatccctacttacattca 12111598  T
Q  107 acgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaag 206  Q
     | ||||||||||||||||||||||||| |||||||||  ||| |||||||||||||||||| ||||||||||||||||| || ||   ||||| | |||    
T  12111599 tcacaattgcatatggaacgaacatacatatataatat--tattttccaccatattccgaaatataaatccgacgtcgctatcatctttaataaaccaag 12111696  T
Q  207 gcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||||||||||||||||||||||| | ||||||||    
T  12111697 gcatatagcttgtcgttttccatgtgtattcatttctatcttctcctaggtctatgcatggcatttaatcaaacaag 12111773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34622780 - 34622827
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34622780 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 34622827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47742780 - 47742733
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47742780 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 47742733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 15070140 - 15070094
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  15070140 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 15070094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 18109583 - 18109537
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  18109583 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 18109537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 42503628 - 42503582
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  42503628 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 42503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 30790792 - 30790750
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  30790792 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 30790750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 45767646 - 45767604
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  45767646 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 45767604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 50113589 - 50113871
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50113589 cacaaacgtttgaaattcatcaaaacattacaaagtgtccataacaaagtgtccataattaaacaactcattacacattattaaattaaatccctactta 50113688  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||    
T  50113689 cattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataa 50113788  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50113789 gccaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 50113871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 33 - 283
Target Start/End: Original strand, 12643505 - 12643755
Alignment:
Q  33 aagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacata 132  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12643505 aagtgtctataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacata 12643604  T
Q  133 caaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcg 232  Q
    || |||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||    
T  12643605 catatataatatattattttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcg 12643704  T
Q  233 tattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12643705 tattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 12643755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 44469770 - 44469534
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44469770 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 44469671  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  44469670 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 44469571  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  44469570 ttctcctaggtctatgcatggcatttgaccaaacaag 44469534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 9710891 - 9711127
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  9710891 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaaagaacatacatatataatatat 9710990  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  9710991 tatctttcaccatattccgaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctctatc 9711090  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||| ||||||||||||||||    
T  9711091 ttctcctaggtctatgcatgtcatttgaccaaacaag 9711127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 37019155 - 37018919
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37019155 aagtgtccataattaaacaactcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 37019056  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||| | |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  37019055 tatcttccaccatattccgaaacataaatcctatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctctatc 37018956  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  37018955 ttctcctaggtctatgcatggcatttgaccaaacaag 37018919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 3944289 - 3944525
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  3944289 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 3944388  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3944389 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 3944488  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  3944489 ttctcctaggtctatgcatggcatttgaccaaacaag 3944525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 6558215 - 6558451
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6558215 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 6558314  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  6558315 tatcttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 6558414  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  6558415 ttctcctaggtatatgcaaggcatttgaccaaacaag 6558451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 30909788 - 30909552
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  30909788 aagtgtccataattaaagtactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatat 30909689  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  30909688 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctctatc 30909589  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  30909588 ttctcctaggtctatgcatggcatttgaccaaacaag 30909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 3993601 - 3993365
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  3993601 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 3993502  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| ||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3993501 tgtcttccaccatattccgaaacataaatctgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 3993402  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  3993401 ttctcctaggtctatgcatggcatttgaccaaacaag 3993365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 29352547 - 29352783
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  29352547 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 29352646  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  29352647 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 29352746  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || ||||||||| ||||||||||||||||||||||||    
T  29352747 ttttcctaggtcaatgcatggcatttgaccaaacaag 29352783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 13633631 - 13633395
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  13633631 aagtgtccataattaaactactcattacacatcaataaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatat 13633532  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| ||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  13633531 tatcttccaccatattccgaaacataaatccgacgtcgccgtcatcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 13633432  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13633431 ttctcctaggtctatgcaaggcatttgaccaaacaag 13633395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 20353694 - 20353458
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  20353694 aagtgtccataattaaactactcattatacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 20353595  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||    
T  20353594 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctttatc 20353495  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  20353494 ttctcctaggtctatgcatggcatttgaccaaacaag 20353458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 38771945 - 38772181
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  38771945 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 38772044  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||| | |||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  38772045 tgtcttccaccatattccgaaacataaatccgacgtcaccgtcgtcgcggataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 38772144  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  38772145 ttctcctaggtctatgcatggcatttgaccaaacaag 38772181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 5082123 - 5081887
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5082123 aagtgtccataattaaagtactccttacacatcattaaattaaatccatatttacattcaacgcaattgcatatggaacgaacatacatatataatatat 5082024  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||| |||| |||||||||||||||||| ||||||||    
T  5082023 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataccttgtcgttttccatgcgtattcatctctatc 5081924  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  5081923 ttctcctaggtctatgcatggcatttgaccaaacaag 5081887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 48 - 283
Target Start/End: Original strand, 7966298 - 7966538
Alignment:
Q  48 agtgtccataattaaacaactcattac------acatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataa 141  Q
    |||||||||||||||||||| ||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  7966298 agtgtccataattaaacaacacattacatttacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatgtaa 7966397  T
Q  142 tatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttct 241  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||    
T  7966398 tatattatcttccaccatattccgaaacataaatctgacgtcgctatcgtcgcgaataagc-aaggcatatagcttgccgttttccatgcgtattcatct 7966496  T
Q  242 ctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7966497 ctatcttctcctaggtctatgcatggcatttgaccaaacaag 7966538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 46979049 - 46978757
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaac----------tcattacacatcattaaattaaa 90  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||| ||||||    
T  46979049 cacaaaagtttgaaattcatcaaaacattacaaagtgtccataattaagtgtccataattaaacaacacattacaattcattacacatcattatattaaa 46978950  T
Q  91 tccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcg 190  Q
    |||||||||||||||| | |||||||||  |||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||||||||||| |||    
T  46978949 tccctacttacattcatcacaattgcattaggaacgaacatacatatataatatattattttccaccatatttcgaaacataaatccgacgtcgctatcg 46978850  T
Q  191 tcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||   ||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  46978849 tctttaataagccaaggcatatagcttgtcgttttccatgtgtattcatctctatcttctcctaggtctatgcatgacatttgaccaaacaag 46978757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 8459271 - 8459507
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  8459271 aagtgtccataattaaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattacatatagaacgaacatacatgtataatatat 8459370  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||||||| ||||||||  |||| ||||||||||||||||| ||||| ||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||    
T  8459371 tatcttctaccatattttgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcgtattcatctctatc 8459470  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||| ||||||||||||||||||||    
T  8459471 ttctcctaggtctatgtatggcatttgaccaaacaag 8459507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 63 - 284
Target Start/End: Complemental strand, 1655823 - 1655602
Alignment:
Q  63 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatatt 162  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1655823 acaactcattacacatcattaaattaaatcattacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatt 1655724  T
Q  163 ccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatg 262  Q
    |||||| ||||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  1655723 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtccatg 1655624  T
Q  263 catggcatttgaccaaacaagc 284  Q
    |||| || || |||||||||||    
T  1655623 catgacactttaccaaacaagc 1655602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 51666425 - 51666189
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  51666425 aagtgtccataattaaacaactcattacacatcattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatat 51666326  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| |||||||||||||||||| |||||| |||||||||| |||||   ||||||| ||||||||||||||| ||| ||||||| |||||| ||||||||    
T  51666325 tattttccaccatattccgaaacataaattcgacgtcgctatcgtctttaataagccaaggcatatagcttgtcgtgttccatgtgtattcatctctatc 51666226  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||| ||||||||||||||||    
T  51666225 ttctcctaggtctatgcatgacatttgaccaaacaag 51666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 13177927 - 13177649
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||||    | | | ||||  ||||||||||||||| ||||||||||||||||||||    
T  13177927 cacaaaagtttgaaattcatcaaaacgttacatagtgtccatagttaaa---caacacatta--caactcattacacattattaaattaaatccctactt 13177833  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    || ||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||| ||    
T  13177832 actttcaatgcaattgcatatggaatgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgttgcgatta 13177733  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| ||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||    
T  13177732 agccaagccatatagcttgccgttttccatgcgtattcatctctattttctcctaggtctatgaatggcatttgaccaaacaag 13177649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 38690223 - 38690458
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||| |||||||| |||||||||||    
T  38690223 aagtgtccataattaaacaacacattacacatcattatattaaatcc-tacttacattcatcacaattgcatatggaacaaacatacatatataatatat 38690321  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| ||||||||||||  |||| ||||||||||||||||| |||||   ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  38690322 tattttccaccatattttgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgtattcatctctatc 38690421  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  38690422 ttctcctaggtctatgcatggcatttgaccaaacaag 38690458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 4518207 - 4517917
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaac----------tcattacacatcattaaattaaa 90  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||          |||||||||||||||| ||  ||    
T  4518207 cacaaaagtttgaaattcatcagaacgttacaaaatgtccataattaagtgtccataattaaacaacacattacaactcattacacatcattatat--aa 4518110  T
Q  91 tccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcg 190  Q
    |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||| ||| | |    
T  4518109 tccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattatttttcaccatattccgaaacataaatccgacgttgctatag 4518010  T
Q  191 tcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||   ||||||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  4518009 tctttaataagccaaggcatatagcttgccattttccatgcgtattcatctttatcttctcctaggtctatgcatgacatttgaccaaacaag 4517917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 36072644 - 36072922
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||| ||||||||||||||||||| ||| | ||||||||| |||||     ||  ||   |||||||||||||||||||||||||||||| |||||||    
T  36072644 cacaaaagtttgaaattcatcaaaacattagatagtgtccatgattaaa----caacatattacaactcattacacatcattaaattaaatctctactta 36072739  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||   ||| |    
T  36072740 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcatcttcaatta 36072839  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||||||||  ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||    
T  36072840 gccaaggcatatagcttgttgttttccatgcgtattcatcgctatcttctcttaggtctatgcatggcatttgaccaaacaag 36072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 8 - 283
Target Start/End: Original strand, 33168192 - 33168463
Alignment:
Q  8 gtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctacttacattca 106  Q
    |||||||| |||||||||||||||| |||||||||||||||    | | | ||||  |||||||||||| |||||||||||||||||||||||||| |||    
T  33168192 gtttgaaaatcatcaaaacgttacatagtgtccataattaaa---caacacatta--caactcattacatatcattaaattaaatccctacttacactca 33168286  T
Q  107 acgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaag 206  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||   ||||||  |||    
T  33168287 acgcaattacatatggaacgaacatacatatataatatattattttccaccatattccgaaacataaatctgacgtcgctatcgtctaaaataagtcaag 33168386  T
Q  207 gcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  33168387 gcatatagcttgttgttttccatgcgtattcatctctatcttctcctaagtctatgcatggcatttgaccaaacaag 33168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 63 - 283
Target Start/End: Original strand, 19495382 - 19495603
Alignment:
Q  63 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatatt 162  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  19495382 acaagtcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttccaccatatt 19495481  T
Q  163 ccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccg-ttttccatgcgtattcttctctatcttctcctaggtctat 261  Q
    |||||| |||||||| |||||||| ||||| ||||||||| |||||||||||||||||| |||| ||| ||||||| ||||||||||||| ||||  |||    
T  19495482 ccgaaacataaatccaacgtcgctatcgtctcgaataagccaaggcatatagcttgccgttttttcatacgtattcatctctatcttctcgtaggaatat 19495581  T
Q  262 gcatggcatttgaccaaacaag 283  Q
    ||||| ||||||||||||||||    
T  19495582 gcatgacatttgaccaaacaag 19495603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 60 - 247
Target Start/End: Complemental strand, 25039827 - 25039640
Alignment:
Q  60 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccat 159  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  25039827 taaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgtatatggaacgaacatacacatataatatattatcttccaccat 25039728  T
Q  160 attccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatct 247  Q
    ||||||||| ||||||||||||||| | ||| | ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||    
T  25039727 attccgaaacataaatccgacgtcgttatcgacgcgaataagccaaggcgtatagcttgccgttttccatgcgtattcatctctatct 25039640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 48 - 237
Target Start/End: Complemental strand, 5141628 - 5141439
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||| ||||||||||||| ||||| | ||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  5141628 agtgtcaataattaaacaacacattatatatcgttaaattaaatctctactgacattctacgcaattgcatatggaacgaacatacatatataatatatt 5141529  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattc 237  Q
    |||||||| |||||||||||| ||| ||| ||||||||| ||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  5141528 atcttccatcatattccgaaacatacatctgacgtcgctatcgtcgcgaataagccaacgcatatagcttgccgttttccatgcgtattc 5141439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 216 - 283
Target Start/End: Complemental strand, 41456819 - 41456752
Alignment:
Q  216 ttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  41456819 ttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatgacatttgaccaaacaag 41456752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 15051107 - 15051053
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttac 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15051107 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttac 15051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37019187 - 37019140
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37019187 cacaaacgtttgaaattcatcaaaatgttacaaagtgtccataattaa 37019140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 5082154 - 5082108
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  5082154 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 5082108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 13633662 - 13633616
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  13633662 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 13633616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 15051138 - 15051092
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  15051138 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 15051092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 30909819 - 30909773
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  30909819 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 30909773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 44469801 - 44469755
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  44469801 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 44469755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7966265 - 7966312
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  7966265 cacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaa 7966312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 3993628 - 3993586
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  3993628 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 3993586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 20353721 - 20353679
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  20353721 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 20353679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 51666450 - 51666410
Alignment:
Q  8 gtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  51666450 gtttgaaattcatcaaaaagttacaaagtgtccataattaa 51666410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46886179 - 46886137
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccata 43  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  46886179 cacaaacgtttgaaattcatcgaaacattacaaagtgtccata 46886137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8459239 - 8459268
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgtta 30  Q
    ||||||||||||||||||||||||||||||    
T  8459239 cacaaacgtttgaaattcatcaaaacgtta 8459268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 6489610 - 6489893
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaa-gtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactt 99  Q
    ||||||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6489610 cacaaacgtttgaaattcattgaaacgttacaaaagtgtccatacttaagtgtccataattaaacaactcattacacatcattaaattaaattcctactt 6489709  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  6489710 acattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaatataaatccgacgacgctatcgtcacgaata 6489809  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6489810 agccaaggcatatagcttgccgttttccatgcgtattcgtctctatcttctcctaggtctatgcatggcatttgaccaaacaag 6489893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 283
Target Start/End: Complemental strand, 14402809 - 14402528
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttac 101  Q
    ||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14402809 acaaacgtttgaaattcatgaaaacattacaaagtgtctataattaagtgtccataattaaacaactcattacacgtcattaaattaaatccctacttac 14402710  T
Q  102 attcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataag 201  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  14402709 attcaacgcaattgcatatagaacgaacatacatatataatatattattttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataag 14402610  T
Q  202 ctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  14402609 caaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatgacatttgaccaaacaag 14402528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 283
Target Start/End: Complemental strand, 4002295 - 4002014
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttac 101  Q
    ||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4002295 acaaacgtttgaaattcatcaaaacattacaaagtgtctataactaagtgtccataattaaataactcattacacatcattaaattaaatccctacttac 4002196  T
Q  102 attcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataag 201  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||| |||||| ||||||||    
T  4002195 attcaacacaattgcatatggaacgaacatacatatataatatattattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataag 4002096  T
Q  202 ctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    | ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4002095 caaaggcatatagcttgtcgttttccatgcgtattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 4002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 46989794 - 46990076
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46989794 cacaaacatttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 46989893  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||   ||||| |||||||    
T  46989894 cattcaacacaattgcatgtggaacgaacatacatatataatatattatcttccaccatattccaaaacataaatccgacgtcgtcatcgtcgcgaataa 46989993  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||||||||||||    
T  46989994 gccaaggcatatagcttgccgttttccatgcgtattcatctctatcttctgctagatctatgcatgacatttgaccaaacaag 46990076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 2 - 283
Target Start/End: Original strand, 36813120 - 36813401
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttac 101  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36813120 acaaacgtttgaaattcattaaaacattacaaagtttccataattaattgtccataattaaacaactcattacacatcattaaattatatccctacttac 36813219  T
Q  102 attcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataag 201  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  36813220 attcaacgcaattgcatatggaacgaacatacatatataatatattatattccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataag 36813319  T
Q  202 ctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    | ||| |||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  36813320 caaagacatatagcttgccgttttccacacgtattcatctctatcttctcctaggtctatgcatgacatttgaccaaacaag 36813401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 2743769 - 2744005
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2743769 aagtgttcataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatat 2743868  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  2743869 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 2743968  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  2743969 ttctcctaggtctatgcatggcatttgaccaaacaag 2744005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 9426919 - 9427155
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  9426919 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 9427018  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  9427019 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagtttgccgttttccatgcgtattcatctctatc 9427118  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  9427119 ttctcctaggtctatgcatggcatttgaccaaacaag 9427155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 13743580 - 13743816
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  13743580 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 13743679  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  13743680 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 13743779  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  13743780 ttctcctaggtctatgcatggcatttgaccaaacaag 13743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 30943505 - 30943741
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  30943505 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 30943604  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30943605 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 30943704  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  30943705 ttctcctaggtctatgcatggcatttgaccaaacaag 30943741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 3952973 - 3952737
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  3952973 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 3952874  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| ||||||||||||| || |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3952873 tgtcttccaccatattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 3952774  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  3952773 ttctcctaggtctatgcatggcatttgaccaaacaag 3952737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 8156823 - 8157059
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  8156823 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 8156922  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  8156923 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 8157022  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||| |||||||||||||||||    
T  8157023 ttctcctaggtctatgcatagcatttgaccaaacaag 8157059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 279
Target Start/End: Complemental strand, 50957438 - 50957206
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  50957438 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 50957339  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| | |||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  50957338 tatcttccaccatattccgaaacaaaaatccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctctatc 50957239  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaa 279  Q
    |||| ||||||||||||||||||||||||||||    
T  50957238 ttcttctaggtctatgcatggcatttgaccaaa 50957206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 6745085 - 6744849
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  6745085 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 6744986  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| ||||||||||||| || |||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  6744985 tgtcttccaccatattccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctctatc 6744886  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  6744885 ttctcctaggtctatgcatggcatttgaccaaacaag 6744849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 48246725 - 48246961
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  48246725 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcagttgcatatggaacaaacatacatatataatatat 48246824  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||| ||||||||| || |||||||||||| |||||||||||||||||| ||||||||    
T  48246825 tatcttccaccatattccgaaacataaatctgacgtcgccgtcgtcgcgaataagccaaagcatatagcttgtcgttttccatgcgtattcatctctatc 48246924  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48246925 ttctcctaggtctatgcatagcatttgaccaaacaag 48246961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 49 - 283
Target Start/End: Original strand, 21952115 - 21952349
Alignment:
Q  49 gtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatta 148  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  21952115 gtgtccatgattaaacaactcattacacgtcattaaattaaatccctagttacattcaatgcaattgcatatggaacgaacatacaaatataatatatca 21952214  T
Q  149 tcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatctt 248  Q
    ||||||||||||||||||||  |||||||||||||||| || || ||||||||| |||||| ||||||||||||||||||||||||||| | ||||||||    
T  21952215 tcttccaccatattccgaaacctaaatccgacgtcgctatcatcgcgaataagccaaggcacatagcttgccgttttccatgcgtattcatatctatctt 21952314  T
Q  249 ctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||    
T  21952315 ctcctaggtctatgcatggcatttgaccaaacaag 21952349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 47 - 255
Target Start/End: Complemental strand, 2857741 - 2857533
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  2857741 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaatgaacatacatatataatatat 2857642  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| ||||||||| |||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  2857641 tattttccaccattttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 2857542  T
Q  247 ttctcctag 255  Q
    |||||||||    
T  2857541 ttctcctag 2857533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 67155 - 67433
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||||    | | | ||||  ||||||||||||||||||||||| ||||||||||||    
T  67155 cacaaaagtttgaaattcatcaaaacggtacatagtgtccataattaaa---caacacatta--caactcattacacatcattaaatgaaatccctactt 67249  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||||||||||  ||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||| | |||   ||||    
T  67250 acattcaacgcaatcacatatggaacgaacatacatatataatgtattattttccaccatattccgaaacataaatccgacgtcgctattgtctttaata 67349  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| ||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  67350 agccaagacatatagcttgccgtttttcatgcgtattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 67433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 7841409 - 7841474
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaa 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7841409 aagtgtccataattaaacaactcattgcacatcattaaattaaatccctacttacattcaacgcaa 7841474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 3953000 - 3952958
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  3953000 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 3952958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 6745112 - 6745070
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  6745112 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 6745070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 21952081 - 21952113
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  21952081 cacaaacgtttgaaattcatcaaaacgttacaa 21952113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 24601921 - 24602201
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24601921 cacagacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 24602020  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  24602021 cattcaacgcaattgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataa 24602118  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  24602119 gccaaggcatatagcttgccgttttccatccgtattcgtctctatcttctcctaggtctatgcatggcatttgaggaaacaag 24602201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 24612193 - 24611913
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24612193 cacagacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 24612094  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  24612093 cattcaacgcaattgcatatggaacgaacat--atatataatatattatcttccaccatattccgaaaaataaatccgacgttgctatcgtcgcgaataa 24611996  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  24611995 gccaaggcatatagcttgccgttttccatccgtattcgtctctatcttctcctaggtctatgcatggcatttgaggaaacaag 24611913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 9659847 - 9659563
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9659847 cacaaacgcttgaaattcatcaaaacgttacacagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatacctactta 9659748  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatat--aatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaat 198  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||  |||||||||| |||||||||||    
T  9659747 cattcaacgcaattgcatattgaacgaacatacaaatataaaatatattatcttccaccatattccgaaacataaactcgacgtcgctatcgtcacgaat 9659648  T
Q  199 aagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  9659647 aagccaaggcatatagcttgccgttttccatgcgtattcgtctctatcttctcctaggtctatgcatgacatttgaccaaacaag 9659563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 1096851 - 1097133
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  1096851 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgttcataattaaacaactcattacatatcattaaattaaatccctactta 1096950  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| | |||||    
T  1096951 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaattcgacgtcgctatcgtcgcaaataa 1097050  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||  | ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  1097051 gcccaagcatataacttgccgttttccatgcgtattcgtctctatcttctcctaggtctatgcatgacatttgaccaaacaag 1097133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 3795664 - 3795900
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3795664 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 3795763  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3795764 tatcttccaccatattctgaaacataaatccgacgtcgccgtcgtcacgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 3795863  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  3795864 ttctcctaggtctatgcatggcatttgaccaaacaag 3795900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 82055 - 81773
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||    
T  82055 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtgcataattaaacaactcattacacatgattatattaaatgcatactta 81956  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||||||||||||| | |||||   |||||    
T  81955 cattcatcacaattgcatatggaacgaacatacatatataatatattattttcaaccatattccgaaacataaatccgacgtcgttatcgtctttaataa 81856  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |  |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  81855 gtcaagggatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatagcatttgaccaaacaag 81773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 439615 - 439333
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||||    
T  439615 cacaaacgtttgaaattcatcaaagcgttacaaagtatccataattaagtgttcataattaaacaactcattacacatgattatattaaatccctcctta 439516  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||||||||||||||||| |||||   |||||    
T  439515 cattcatcacaattgcatatggaacgaacatacatatataatatattactttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataa 439416  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  439415 gccagggcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcaaggaatttgaccaaacaag 439333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 41052903 - 41053183
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     ||||||||    
T  41052903 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaattcattacacatcattaaatt-----cctactta 41052997  T
Q  101 cattcaacgcaattgcatat--ggaacgaacatacaaatataa-tatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaa 197  Q
    ||||||| ||||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  41052998 cattcaatgcaattgcatatatggaacgaacacacatatataaatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaa 41053097  T
Q  198 taagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  41053098 taagccaaggcatatagcttggcgttttcaatgcgtattcgtctctatcttctcctaggtctatgcatggcatttgacaaaacaag 41053183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 5351490 - 5351254
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  5351490 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 5351391  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  5351390 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 5351291  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  5351290 ttctcctaggtctatgcatggcatttgaccaaacaag 5351254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 10620288 - 10620524
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  10620288 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 10620387  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  10620388 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 10620487  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  10620488 ttctcctaggtctatgcatggcatttgaccaaacaag 10620524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 41181724 - 41181960
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  41181724 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 41181823  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| || |||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  41181824 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgtataagccaatgcatatagcttgccgttttccatgcgtattcgtctctatc 41181923  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||| |||||||||||||||||||||||||    
T  41181924 ttctcctaggtgtatgcatggcatttgaccaaacaag 41181960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 41564249 - 41564013
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  41564249 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 41564150  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  41564149 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 41564050  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  41564049 ttctcctaggtctatgcatggcatttgaccaaacaag 41564013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 209299 - 209535
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  209299 aagtgtccataattaaactactcattacacatcattaaattaaatccatacttacattcaatgcaattacatatggaacgaacatacatatataatatat 209398  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  209399 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 209498  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  209499 ttctcctaggtctatgcatggcatttgaccaaacaag 209535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 7267203 - 7266967
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  7267203 aagtgtccataattaaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 7267104  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||| |||||||||| |||||||||||||||||| ||||||||    
T  7267103 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggtatatagcttgtcgttttccatgcgtattcatctctatc 7267004  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  7267003 ttctcctaggtctatgcatggcatttgaccaaacaag 7266967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 51 - 283
Target Start/End: Complemental strand, 39798195 - 39797963
Alignment:
Q  51 gtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatc 150  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  39798195 gtccataattaaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatc 39798096  T
Q  151 ttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttct 250  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  39798095 ttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatcttct 39797996  T
Q  251 cctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||| ||||||||||||||||||    
T  39797995 cctaggtctatgcaaggcatttgaccaaacaag 39797963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 28342836 - 28343073
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28342836 aagtgttcataattaaacaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 28342935  T
Q  147 tatcttccaccatattccgaaaa-ataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctat 245  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||| |||||| |||||||    
T  28342936 tatcttccaccatattccgaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttacatgtgtattcgtctctat 28343035  T
Q  246 cttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  28343036 cttctcctaggcctatgcatggcatttgaccaaacaag 28343073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 24753783 - 24753547
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  24753783 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacaaacatacatatataatatat 24753684  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| |||||||||||||||||| |||||| ||| ||||| |||||| ||||||||| || ||||||||||||||||||||||| ||||||| ||||||||    
T  24753683 tattttccaccatattccgaaacataaatacgatgtcgccgtcgtcgcgaataagcaaaagcatatagcttgccgttttccatacgtattcatctctatc 24753584  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  24753583 ttctcctaggtctatgcatggcatttgaccaaacaag 24753547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 48 - 283
Target Start/End: Complemental strand, 45479579 - 45479345
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45479579 agtgtccataattaaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatatt 45479480  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatct 247  Q
    |||||||||||||||| |||| |||||||||||| || | ||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  45479479 atcttccaccatattctgaaacataaatccgacgccgatatcgtcgcgaataagccaaggcatatagcttgccgttttccatgtgtattcatctctatct 45479380  T
Q  248 tctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||| ||||||||||||||||||    
T  45479379 tctcctaggtctatgca-ggcatttgaccaaacaag 45479345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 12905801 - 12906078
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||||||||| |||||| ||||||||    | | | ||||  |||||||||||||||||||||||||||||| |||||    
T  12905801 cacaaaagtttgaaattcatcaaaacgttacatagtgtcaataattaaa---caacacatta--caactcattacacatcattaaattaaatccgtactt 12905895  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||    
T  12905896 acattcaacgcaattgcatatggaacaaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaata 12905995  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaa 282  Q
    ||| |||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  12905996 agccaaggcatatagcttgttgttttccatgcgtattcatctttatcttctcctaggtctatgcatggcatttgaccaaacaa 12906078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 63 - 283
Target Start/End: Original strand, 43944031 - 43944251
Alignment:
Q  63 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatatt 162  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  43944031 acaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatatattatattatcttccaccatatt 43944130  T
Q  163 ccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatg 262  Q
    |||||| ||||||| ||||||||| || || ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43944131 ccgaaacataaatctgacgtcgctatcatcgcgaataagccaatgcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatg 43944230  T
Q  263 catggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||    
T  43944231 catggcatttgaccaaacaag 43944251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 54 - 283
Target Start/End: Complemental strand, 1150783 - 1150554
Alignment:
Q  54 cataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttc 153  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||| |||||||||| |||||||    
T  1150783 cataattaaacaattcattacacatcattaaattaaatcactacttacattcaatgaaattgcatatggaacgaacatacatatataatatagtatcttc 1150684  T
Q  154 caccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcct 253  Q
    || |||||||| ||| ||||||||||||||||| ||||||| ||||| | ||||| ||||| |||||||||||||||||||||  |||||||||||||||    
T  1150683 catcatattccaaaacataaatccgacgtcgctatcgtcacaaataaaccaaggcgtatagtttgccgttttccatgcgtatttatctctatcttctcct 1150584  T
Q  254 aggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||||||||||||||    
T  1150583 aggtctatgcatggcatttgaccaaacaag 1150554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 41004808 - 41005086
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    | | | ||||  |||||||||||||||||||| |||||||| ||||||    
T  41004808 cacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaaa---caacacatta--caactcattacacatcattatattaaatcactactt 41004902  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||| | ||||||||||||||| ||||||||| ||||||||||| || || || ||||||| |||| ||||||| |||||| |  |||||   ||||    
T  41004903 acattcatcacaattgcatatggaatgaacatacatatataatatataatttttcaacatattctgaaacataaatctgacgtcccaatcgtctttaata 41005002  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| | ||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||    
T  41005003 agccagggcatgtagcttgtcgttttccatgcgtattcatctctatcttctcctaggtctgtgcattgcatttgaccaaacaag 41005086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 137 - 283
Target Start/End: Complemental strand, 38949855 - 38949709
Alignment:
Q  137 tataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtatt 236  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  38949855 tataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgccgttttccatgcgtatt 38949756  T
Q  237 cttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  38949755 catctctatcttctcctaggtctatgcatggcatttgaccaaacaag 38949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 38950325 - 38950232
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatata 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  38950325 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacacaattacatatggaacgaacatacatatata 38950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 18000547 - 18000607
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaa 107  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18000547 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaa 18000607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 228
Target Start/End: Original strand, 25613526 - 25613697
Alignment:
Q  57 aattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccac 156  Q
    |||||| |||| ||||||| ||||||| || ||||| ||| | |||||| | |||  |||| |||||||||||| | | |||||||||||||||||  |     
T  25613526 aattaatcaacacattacatatcattacataaaatctctattgacattctatgcacatgcagatggaacgaacacaaagatataatatattatctttaat 25613625  T
Q  157 catattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttcca 228  Q
     ||||||  ||| |||||||| |||||||| ||||||||||||||  |||||| |||||| |||||||||||    
T  25613626 tatattcataaacataaatcctacgtcgctatcgtcacgaataagtcaaggcacatagctcgccgttttcca 25613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41181692 - 41181739
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41181692 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 41181739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 7267234 - 7267188
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  7267234 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 7267188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 24753814 - 24753768
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  24753814 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 24753768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 38950356 - 38950310
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  38950356 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 38950310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 5351517 - 5351475
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  5351517 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 5351475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 41564276 - 41564234
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  41564276 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 41564234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28342804 - 28342841
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgt 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28342804 cacaaacgtttgaaattcatcaaaacgttacaaagtgt 28342841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 43943980 - 43944014
Alignment:
Q  8 gtttgaaattcatcaaaacgttacaaagtgtccat 42  Q
    |||||||||||||||||||||||||||||||||||    
T  43943980 gtttgaaattcatcaaaacgttacaaagtgtccat 43944014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 43668499 - 43668560
Alignment:
Q  136 atataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaa 197  Q
    |||||||||||||||||| ||||||| || ||| |||||||| ||||| || ||||||||||    
T  43668499 atataatatattatcttcaaccatatgcctaaacataaatcctacgtcactatcgtcacgaa 43668560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 3207030 - 3207076
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||| |||||||||||||||||||||| ||  ||||||||||||||    
T  3207030 acaaaagtttgaaattcatcaaaacgttgcatggtgtccataattaa 3207076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Complemental strand, 39798228 - 39798194
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagt 36  Q
    ||||||||||||||||||||||||| |||||||||    
T  39798228 acaaacgtttgaaattcatcaaaacattacaaagt 39798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 7537468 - 7537750
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  7537468 cacaaacgtttgaaattcatctaaacattacaaagtgtccataattaagtgtccataattaaacaaatcattgcacatcattaaattaaatccctactta 7537567  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||    
T  7537568 cattcaacgcaaatgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataa 7537667  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  7537668 gccaaggcatataacttgctgttttccatgcgtattcgtctctatcttctcctaggtctatgcatggaatttgaccaaacaag 7537750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 2051309 - 2051587
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||||||||||||||||||||||||| || |||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2051309 cacaaacgtttgaaattcatcaaaacgataaaaagtgttaataattaagtgttcataattaaacaactcattacacatcattaaattaaatccctactta 2051408  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||  ||||| |||||||    
T  2051409 cattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatttcgaaacataaatccgacgtcgccatcgtcgcgaataa 2051508  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaa 279  Q
    || ||| |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  2051509 gccaagacatataacttgccgttttccatgcgtattcgtctatatcttctcctaggtctatgcatgacatttgaccaaa 2051587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 25140865 - 25140628
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaa-atataatata 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  25140865 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacattatataatata 25140766  T
Q  146 ttatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctat 245  Q
    ||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  25140765 ttatctttcaccatattccgaaacataaatgcgacgtcgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgtgtattcgtctctat 25140666  T
Q  246 cttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25140665 cttctcctaggtctatgcatggcatttgaccaaacaag 25140628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 1608608 - 1608844
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  1608608 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 1608707  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  1608708 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 1608807  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  1608808 ttctcctaggtctatgcatggcatttgaccaaacaag 1608844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 13382955 - 13383191
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13382955 aagtgtccataattaaactactcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 13383054  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||| |||| |||||||||||||||||| ||||||||    
T  13383055 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgacgttttccatgcgtattcatctctatc 13383154  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||| ||||||||||||||||    
T  13383155 ttctcctaggtctatgcatgacatttgaccaaacaag 13383191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 29286516 - 29286752
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29286516 aagtgtccataattaaacaactcattacacatcattaaattaaacctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 29286615  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||| ||| |||||| ||||||||    
T  29286616 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttttctatgtgtattcgtctctatc 29286715  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  29286716 ttctcctaggtctatgcatggcatttgaccaaacaag 29286752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 28362522 - 28362240
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||| || |||||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  28362522 cacaaccgattgaaattcaacaaaacgttacaaagtgttcataattaaatgtccatcattaaacaactcattacacatcattaaattaaatccctacata 28362423  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    ||||| || ||||||||||| || |||||||||| |||||||||||||||||||||||||||| |||| |||||| |||||||||| || || | |||||    
T  28362422 cattctacacaattgcatatcgatcgaacatacatatataatatattatcttccaccatattctgaaacataaattcgacgtcgctatcatcgcaaataa 28362323  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28362322 gccaaggcatatagcttgccattttccatgcttattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 28362240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 29667624 - 29667346
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||    | | | ||||  ||||||||||||||||||||||||||||||||||||    
T  29667624 cacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaa---caacacatta--caactcattacacatcattaaattaaatccctactt 29667530  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||| ||||| ||||||||||||    
T  29667529 acattcaacgcaattgcatatggaacgaacatacatatataatatattaacttccaccatattccgaaacataaatctgacatcgctatcgtcacgaata 29667430  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  29667429 agccaaggcatatagcttgccgttttccatgcgtattcatctctatcttcccctaggtctatgcatgacatttgaccaaacaag 29667346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 31150824 - 31150588
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||| |||||||||||    
T  31150824 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacatacattcaacgcaattgcatatcgatcaaacatacatatataatatat 31150725  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||  ||| ||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  31150724 tatcttccaccatattctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccaagcgtattcatctctatc 31150625  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  31150624 ttctcctaggtctatgcatggcatttgaccaaacaag 31150588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 48 - 283
Target Start/End: Original strand, 23959205 - 23959443
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  23959205 agtgtccataattaaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatt 23959304  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatct 247  Q
    ||||| ||||||||||||||| |||||||| |||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||| |||||| ||    
T  23959305 atcttacaccatattccgaaacataaatccaacgtcgctatcgtcgtgaataagccaaggcatatagcttgccgttttccatgcgtattcatctctagct 23959404  T
Q  248 tctcctaggtct---atgcatggcatttgaccaaacaag 283  Q
    ||||||||||||   ||||||| |||| |||||||||||    
T  23959405 tctcctaggtctatgatgcatgacattggaccaaacaag 23959443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 47 - 261
Target Start/End: Complemental strand, 18609992 - 18609778
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  18609992 aagtgtccataattaaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatat 18609893  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
     || |||||||||||||||||| ||||||||||||||||| |||||   ||||||| |||||||||| |||| |||||||||||| ||||  ||||||||    
T  18609892 aattttccaccatattccgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatataacttgtcgttttccatgcatatttatctctatc 18609793  T
Q  247 ttctcctaggtctat 261  Q
    |||||||||||||||    
T  18609792 ttctcctaggtctat 18609778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 48 - 283
Target Start/End: Original strand, 2259400 - 2259634
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||||||||||||||||| |||||||  | |||||||||||||| ||||||||||||||| | ||||||||||||| ||||| || ||||||||||||    
T  2259400 agtgtccataattaaacaacacattacaacttattaaattaaatccttacttacattcaacgta-ttgcatatggaacaaacatgcatatataatatatt 2259498  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatct 247  Q
    || |||||||||||| ||||| ||||||| ||||||||| |||||   ||||||| || |||||||||||| ||||||| |||||||||| |||||||||    
T  2259499 attttccaccatatttcgaaacataaatctgacgtcgctttcgtctttaataagccaatgcatatagcttgtcgttttctatgcgtattcatctctatct 2259598  T
Q  248 tctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||| |||||||| |||||||    
T  2259599 tctcctaggtctatgcatgacatttgacaaaacaag 2259634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 34230795 - 34230956
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||| |||||| || || ||||| |||||||||||||||| ||||||||||||    
T  34230795 agtgtccataattaaacaacacattacacatcgttaaattaaatctctactaacattctacacagttgcagatggaacgaacatacatatataatatatt 34230894  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggca 209  Q
    |||||| |||||||||  ||| ||||||| |||||| || || ||  |||||||| ||||||    
T  34230895 atcttctaccatattctaaaacataaatcggacgtcactatcctcttgaataagccaaggca 34230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18610024 - 18609977
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18610024 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 18609977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29286484 - 29286531
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29286484 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 29286531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31150856 - 31150809
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31150856 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 31150809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 18351402 - 18351348
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttac 101  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  18351402 aagtgtccataattaaactacttattacacatcattaaattaaatccctacttac 18351348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 20448545 - 20448386
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||||||||||||||||| |||| || ||||||| || ||||  |||   |||||| || || ||||| ||| ||| |||| ||| ||||||||||||    
T  20448545 agtgtccataattaaacaacacatttcatatcattacataaaatatctatcgacattctacacatttgcaaatgtaacaaacacacatatataatatatt 20448446  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggc 208  Q
    ||||| || ||||| || ||| ||||||   |||||||| ||||||||||||||| |||||    
T  20448445 atctt-caacatatacctaaacataaatgaaacgtcgctatcgtcacgaataagccaaggc 20448386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26702503 - 26702456
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  26702503 cacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaa 26702456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 18351433 - 18351387
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  18351433 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 18351387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 25140896 - 25140850
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  25140896 acaaacgtttgaaattcatcaacacgttacaaagtgtccataattaa 25140850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 10 - 283
Target Start/End: Original strand, 22691 - 22964
Alignment:
Q  10 ttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacg 109  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22691 ttgaaattcatcaaaacattacaaagtgttcataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacg 22790  T
Q  110 caattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggca 209  Q
    |||||||| |||||||||||||||| |||||||||| ||| ||||||||||||| |||| |||||||||||||||| |||||| | ||||||| ||||||    
T  22791 caattgcaaatggaacgaacatacatatataatataatattttccaccatattctgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaaggca 22890  T
Q  210 tatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  22891 tatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatgtcatttgaccaaacaag 22964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 34122806 - 34123088
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  34122806 cacaaacgtttgaaattcatcaaaaggttacaaggtgttcataattaagtgtccataattaaacaactcattacacatcattaaattaaattcatactta 34122905  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||| ||||||| ||||||||| ||||| |||||||    
T  34122906 cattcaatgcaattgcatatggaacgaacatatatatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgtcgcgaataa 34123005  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  34123006 gccaaggcatataacttaccgttttccatgcgtattcatctctatcttctcccaggtctatgcatggcatttgaccaaacaag 34123088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 2 - 283
Target Start/End: Complemental strand, 1039595 - 1039315
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctacttac 101  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||    
T  1039595 acaaacgtttgaaattcatcaaaacattacaaagtgtctataattaagtgtcaataatttaacaactcattacatatcattaaattaaatccctacttac 1039496  T
Q  102 attcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataag 201  Q
    ||||||||||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||| ||| |||||||||| ||||| |||||| ||||||||    
T  1039495 attcaacgcaactgcatatggtacgaacatacatatataacatattattttccaccatattcc-aaacataaatccgatgtcgccgtcgtcgcgaataag 1039397  T
Q  202 ctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1039396 caaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 1039315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 7796891 - 7797127
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7796891 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 7796990  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  7796991 tatcttccaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctctatc 7797090  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||| ||||||||||||||||||||||||||||||||    
T  7797091 ttcttctaggtctatgcatggcatttgaccaaacaag 7797127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 27863717 - 27863953
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  27863717 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatatat 27863816  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  27863817 tatcttccaccatattccaaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctctatc 27863916  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  27863917 ttctcctaggtctatgcatggcatttgaccaaacaag 27863953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 13563955 - 13564191
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  13563955 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggatcgaacatacatatataatatat 13564054  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| ||||||||||||||||| || || | ||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  13564055 tatcttccaccatattccgaaacataaatccgacgtcgctatcatcgcaaataagccaaggcatatagcttgccgttttccatgcgtattcatctctatc 13564154  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  13564155 ttctcctaggtctatgcatggcatttgaccaaacaag 13564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 14280737 - 14280501
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  14280737 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatat 14280638  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    | |||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  14280637 tgtcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 14280538  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  14280537 ttctcctaggtctatgcatggcatttgaccaaacaag 14280501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 28882302 - 28882538
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28882302 aagtgtccataattaaactactcattacacatcattaaattaaatccccacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 28882401  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| | ||||||| || ||||||||||||||||||||||||||||||| ||||||||    
T  28882402 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaatgcatatagcttgccgttttccatgcgtattcatctctatc 28882501  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  28882502 ttctcctaggtctatgcatggcatttgaccaaacaag 28882538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 37814896 - 37815132
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  37814896 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttactttcaacgcaattacatatggaacgaacatacatatataatatat 37814995  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  37814996 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgtgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 37815095  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  37815096 ttctcctaggtctatgcatggcatttgaccaaacaag 37815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 38856029 - 38856265
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  38856029 aagtgtccataattaaactactcattacacatcattaaattcaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatat 38856128  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  38856129 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 38856228  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||| ||||||||||||||||||    
T  38856229 ttctcctaggtctatgcaaggcatttgaccaaacaag 38856265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 51 - 283
Target Start/End: Original strand, 11029325 - 11029557
Alignment:
Q  51 gtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatc 150  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||    
T  11029325 gtccataattaaactactcatcacacatcattaaattaaatccctacttacattcaacgcaattacatatgaaacgaacatacatatataatatattatc 11029424  T
Q  151 ttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttct 250  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  11029425 ttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatcttct 11029524  T
Q  251 cctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||| |||||| ||||||||||||||||||    
T  11029525 cctaggtttatgcaaggcatttgaccaaacaag 11029557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 25890308 - 25890544
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25890308 aagtgttcataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 25890407  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| ||||||||||||| |||| |||||||||||||||  |||||| ||||||||| ||||||||| |||||| |||||||| |||||||| ||||||||    
T  25890408 tattttccaccatattctgaaacataaatccgacgtcgacgtcgtcgcgaataagcaaaggcatatcgcttgctgttttccacgcgtattcatctctatc 25890507  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||| ||||||||||||||||||||||||||    
T  25890508 ttctcctagggctatgcatggcatttgaccaaacaag 25890544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 60 - 283
Target Start/End: Complemental strand, 33994895 - 33994672
Alignment:
Q  60 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccat 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33994895 taaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 33994796  T
Q  160 attccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtct 259  Q
    |||  |||| ||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  33994795 attaagaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttgtccatgcgtattcatctctatcttctcctaggtct 33994696  T
Q  260 atgcatggcatttgaccaaacaag 283  Q
    ||||||||||||||||||||||||    
T  33994695 atgcatggcatttgaccaaacaag 33994672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 24050308 - 24050588
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||    | | | ||||  ||||||||||||||||||||||||| ||||||||||    
T  24050308 cacaaaagtttgaaattcatcaaaacgttacatagtatccataattaaa---caacacatta--caactcattacacatcattaaattatatccctactt 24050402  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatata--atatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaa 197  Q
    ||||||||||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||| |||| ||||||||||||||||| |||||   ||    
T  24050403 acattcaacgcaattgcatatagaacgaacatacatatataatatatattatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaa 24050502  T
Q  198 taagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |  || |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  24050503 ttcgccaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtatatgcatggcatttgaccaaacaag 24050588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 4196830 - 4197064
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||| | |||||||||||||||||||  |||| |||||||||||    
T  4196830 aagtgtccataattaaacaactcattacatatgattatattaaatccctacttacattcatcacaattgcatatggaacgaa--tacatatataatatat 4196927  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| ||| |||||||||||||| ||||||| ||||||||| |||||   ||||||| ||||||| ||||||| |||||||||||| ||||| ||||||||    
T  4196928 tattttcgaccatattccgaaacataaatctgacgtcgctatcgtctttaataagccaaggcatgtagcttgtcgttttccatgcatattcatctctatc 4197027  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  4197028 ttctcctaggtctatgcatggcatttgaccaaacaag 4197064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 24053435 - 24053712
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||     ||  ||   |||||||||||||||||||||||||| ||||||| |||    
T  24053435 cacaaaagtttgaaattcatcaaaacgttacatagtgtccataattaaa----caacatattacaactcattacacatcattaaattatatccctaatta 24053530  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||   |||      
T  24053531 cattcaacgcaattgcatatagaaagaacatacatatataatatattatcttccaccatattctgaaacataaatccgacgtcgctatcgtcttcaattc 24053630  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || ||||||||||||||| |||||||||||||||||| |||||||| |||||||||| | |||||| ||||||||||||||||    
T  24053631 gccaaggcatatagcttgtcgttttccatgcgtattcatctctatc-tctcctaggtatttgcatgacatttgaccaaacaag 24053712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 47 - 283
Target Start/End: Original strand, 7017825 - 7018048
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7017825 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 7017924  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||             || |||||||| |||||| ||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||    
T  7017925 tatcttccaccatat-------------tctgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccattttccatgtgtattcatctctatc 7018011  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    | |||||||||||||||||| ||||||||||||||||    
T  7018012 tactcctaggtctatgcatgacatttgaccaaacaag 7018048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 82 - 283
Target Start/End: Complemental strand, 28387979 - 28387779
Alignment:
Q  82 taaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacg 181  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  28387979 taaattaaatccctacttacaatcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacg 28387880  T
Q  182 tcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaaca 281  Q
    ||||| |||||  |||||| | |||||||||| |||| ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  28387879 tcgctatcgtcgtgaataa-caaaggcatataacttgtcgttttccatgtgtattcatctttatcttctcctaggtctatgcatggcatttgaccaaaca 28387781  T
Q  282 ag 283  Q
    ||    
T  28387780 ag 28387779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 30352702 - 30352980
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||     ||  |    ||||||||||||| |||| |||||||||||  ||||||    
T  30352702 cacaaaagtttgaaattcatcaaaacgttacacagtgtccataattaaa----cagcacattacaactcattacatatcaataaattaaatctttactta 30352797  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataa 200  Q
    ||||||| ||||||||||||||||  |||||||| |||||||||||||| |||||| ||||||||||| |||||| |||||||||| |||||   || ||    
T  30352798 cattcaatgcaattgcatatggaaaaaacatacatatataatatattattttccacaatattccgaaacataaatacgacgtcgctatcgtctttaacaa 30352897  T
Q  201 gctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    || |||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  30352898 gccaaggcatataacttgccgtttttcatgcatattcatctctatcttctcctaggtctatgcatgacatttgaccaaacaag 30352980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 25877900 - 25878089
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  25877900 cacaaaagtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacgtgattatattaaatccctactta 25877999  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtc 192  Q
    ||  || | |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  25878000 ca--catcacaattgcatatggaacaaacatacatatataatatattattttccaccatattccgaaacataaatccgacgtcgctatcgtc 25878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 47 - 190
Target Start/End: Complemental strand, 34079890 - 34079747
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34079890 aagtgtccataattaaacaactcattacacatcattaaattaaatccttacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 34079791  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcg 190  Q
    ||||||||||||||||| |||| ||||||||| ||||| |||||    
T  34079790 tatcttccaccatattctgaaacataaatccgccgtcgttgtcg 34079747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 112 - 279
Target Start/End: Complemental strand, 43179559 - 43179392
Alignment:
Q  112 attgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcata 211  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||| ||||||||| ||||||||    
T  43179559 attgcagatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcaaacgtcgctatcgtcgcgaataagccaaggcata 43179460  T
Q  212 tagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaa 279  Q
    |||||| ||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||| ||||    
T  43179459 tagcttaccgttttccatgcgtgttcatctctatcttctcctaggtctatgcaagacatttgagcaaa 43179392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 6267789 - 6267925
Alignment:
Q  48 agtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatatt 147  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| ||||| |||||| ||||| ||||| ||||||| || ||||| ||||||||||||    
T  6267789 agtgtccataattaaacaacacattacatatcattaaattaaatctctactgacattctacgcagttgcagatggaacaaaaatacatatataatatatt 6267888  T
Q  148 atcttccaccatattccgaaaaataaatccgacgtcgc 185  Q
    |||||||| ||||||||| || |||||| |||||||||    
T  6267889 atcttccatcatattccg-aacataaattcgacgtcgc 6267925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7796859 - 7796906
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7796859 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 7796906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 34079921 - 34079875
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  34079921 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 34079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 14280764 - 14280722
Alignment:
Q  6 acgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  14280764 acgtttgaaattcatcaaaacattacaaagtgtccataattaa 14280722  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 43179684 - 43179644
Alignment:
Q  8 gtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  43179684 gtttgaaattcatcaaaacgttaaagagtgtccataattaa 43179644  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 11029292 - 11029326
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagt 36  Q
    ||||||||||||||||||||||||| |||||||||    
T  11029292 acaaacgtttgaaattcatcaaaacattacaaagt 11029326  T

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Target: scaffold0494 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 5085 - 4849
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5085 aagtgtccataattaaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 4986  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  4985 tatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctctatc 4886  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||||||||||||||||||||||||||||||||    
T  4885 ttctcctaggtctatgcatggcatttgaccaaacaag 4849  T

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Target: scaffold0494; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 5116 - 5070
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  5116 acaaacgtttgaaattcatgaaaacattacaaagtgtccataattaa 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 47 - 283
Target Start/End: Complemental strand, 15714 - 15478
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15714 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 15615  T
Q  147 tatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatc 246  Q
    ||| |||||||||||||||||| ||||||| |||||| | |||||| ||||||||| |||||||||||||||||||||||||| ||||||| ||||||||    
T  15614 tattttccaccatattccgaaacataaatctgacgtccccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatacgtattcatctctatc 15515  T
Q  247 ttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    |||||||| ||||||||||||||||||||||||||||    
T  15514 ttctcctatgtctatgcatggcatttgaccaaacaag 15478  T

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Target: scaffold0116; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 15745 - 15699
Alignment:
Q  2 acaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaa 48  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  15745 acaaacgtttgaaattcatcaaaacattacaaagtgtccataattaa 15699  T

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Target: scaffold0169 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 92 - 283
Target Start/End: Complemental strand, 10978 - 10787
Alignment:
Q  92 ccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgt 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| ||||    
T  10978 ccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgt 10879  T
Q  192 cacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10878 cacgaataagccaaggcatatagcttgctgttttccatgcgtattcatctctatcttctcctaggtctatgcatggcatttgaccaaacaag 10787  T

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Target: scaffold0794 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 69 - 283
Target Start/End: Complemental strand, 1488 - 1274
Alignment:
Q  69 cattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaa 168  Q
    ||||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||    
T  1488 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 1389  T
Q  169 aataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggc 268  Q
     ||||||||||||||||| | |||   ||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  1388 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctctatcttctcctaggtctatgcatgac 1289  T
Q  269 atttgaccaaacaag 283  Q
    |||||||||||||||    
T  1288 atttgaccaaacaag 1274  T

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Target: scaffold0219 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 19902 - 19743
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccataattaaacaactcattacacatcattaaattaaatccctactta 100  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  19902 cacaaacgtttaaaattcatcaaaacgttacaaagtggccgtaattaagtgttcataattaaacaactcattgcacatcattaaattaaatccctactta 19803  T
Q  101 cattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccata 160  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  19802 cattcaacgcaattgcatatggaacgagcatacatatataatatattatcttccaccata 19743  T

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Target: scaffold0219; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 158 - 283
Target Start/End: Complemental strand, 19582 - 19457
Alignment:
Q  158 atattccgaaaaataaatccgacgtcgctgtcgtcacgaataagctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggt 257  Q
    ||||||||||| ||||||| ||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  19582 atattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctctatcttctccttggt 19483  T
Q  258 ctatgcatggcatttgaccaaacaag 283  Q
    ||||||||| ||||||||||||||||    
T  19482 ctatgcatgacatttgaccaaacaag 19457  T

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Target: scaffold0057 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 21919 - 22188
Alignment:
Q  1 cacaaacgtttgaaattcatcaaaacgttacaaagtgtccataattaagtgtccata-attaaacaactcattacacatcattaaattaaatccctactt 99  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||    | | | ||||  |||||||||||||||||||| |||||||||||||||    
T  21919 cacaaaagtttgaaattcatcaaaacgttaaaaagtgtccataattaaa---caacacatta--caactcattacacatcattatattaaatccctactt 22013  T
Q  100 acattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattccgaaaaataaatccgacgtcgctgtcgtcacgaata 199  Q
    ||||||| | ||||||||||||||||||||||||| ||||         | |||||||||||||| ||| |||||| |||||||||| | |||   ||||    
T  22014 acattcatcacaattgcatatggaacgaacatacatatat---------ttttccaccatattccaaaacataaattcgacgtcgctattgtctttaata 22104  T
Q  200 agctaaggcatatagcttgccgttttccatgcgtattcttctctatcttctcctaggtctatgcatggcatttgaccaaacaag 283  Q
    ||| ||| |||||| |||| | |||||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||||    
T  22105 agccaagacatataacttgtcattttccatgcgtattcatttctatcttctcctaggtctatgcacgacatttgaccaaacaag 22188  T

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Target: scaffold0513 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 8513 - 8600
Alignment:
Q  47 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacataca 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8513 aagtgtccataattaaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacataca 8600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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