View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18757_low_59 (Length: 256)

Name: NF18757_low_59
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18757_low_59
NF18757_low_59
[»] chr5 (6 HSPs)
chr5 (89-255)||(43129725-43129891)
chr5 (179-252)||(32269636-32269710)
chr5 (157-253)||(27336886-27336983)
chr5 (179-253)||(34335530-34335605)
chr5 (157-253)||(13166727-13166824)
chr5 (157-253)||(35310641-35310738)
[»] chr2 (5 HSPs)
chr2 (157-256)||(9675034-9675134)
chr2 (157-252)||(23484755-23484851)
chr2 (157-252)||(17344832-17344928)
chr2 (184-252)||(19161627-19161696)
chr2 (157-229)||(44686636-44686708)
[»] chr4 (4 HSPs)
chr4 (158-253)||(6865631-6865727)
chr4 (157-242)||(3330155-3330240)
chr4 (157-253)||(50000742-50000839)
chr4 (162-253)||(12053604-12053696)
[»] chr3 (4 HSPs)
chr3 (179-256)||(29861987-29862065)
chr3 (158-242)||(37992537-37992621)
chr3 (158-242)||(39583047-39583131)
chr3 (158-242)||(52411720-52411804)
[»] chr6 (5 HSPs)
chr6 (184-255)||(33220555-33220627)
chr6 (158-252)||(32115883-32115978)
chr6 (195-253)||(28543568-28543627)
chr6 (148-253)||(34304689-34304796)
chr6 (158-223)||(357535-357600)
[»] chr7 (5 HSPs)
chr7 (148-252)||(45613649-45613755)
chr7 (160-256)||(10905295-10905390)
chr7 (157-253)||(5825464-5825561)
chr7 (157-242)||(28517104-28517189)
chr7 (159-235)||(983161-983237)
[»] chr8 (2 HSPs)
chr8 (157-253)||(39434860-39434957)
chr8 (185-253)||(35739832-35739901)
[»] chr1 (1 HSPs)
chr1 (158-223)||(34644790-34644855)
[»] scaffold0148 (1 HSPs)
scaffold0148 (177-242)||(33456-33521)


Alignment Details
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 89 - 255
Target Start/End: Complemental strand, 43129891 - 43129725
Alignment:
Q  89 caactttaccgacgtaattccaattcagtcatagacatttttctcaaacaaattagtacaaggagacgctgtgaactttcttactgatctactaaataga 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43129891 caactttaccgacgtaattccaattcagtcatagacatttttctcaaacaaattagtacaaggagacgctgtgaactttcttactgatctactagataga 43129792  T
Q  189 agatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaaatgcatgtgtgaa 255  Q
    ||||||||||| ||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  43129791 agatcgacacttaggcatgcagatgttatgatgtacggatggataggaggaaaaatgcatgtgtgaa 43129725  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 32269636 - 32269710
Alignment:
Q  179 actaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgt 252  Q
    |||| |||||||||| ||||||| || ||||||||||||| |||||| |||  ||||||||||| ||||||||||    
T  32269636 actagatagaagatcaacactcaaatctgcagatgttatggtgtacggatgggtaggaggaaaacatgcatgtgt 32269710  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 27336983 - 27336886
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||||||||||| ||||| | |||| |||||||||||||||| ||   ||| ||||||||| |||||| |||  | ||||||||| |||||||||||    
T  27336983 ctgtgaactttctgactgacccactagatagaagatcgacacttaggcctgcggatgttatggtgtacggatgggttggaggaaaacatgcatgtgtg 27336886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 34335605 - 34335530
Alignment:
Q  179 actaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    |||| |||||||||||||||| ||   |||| |||||||| ||||| ||||| ||||||||||| |||||||||||    
T  34335605 actagatagaagatcgacacttaggcttgcatatgttatggtgtacaaatgagtaggaggaaaacatgcatgtgtg 34335530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 13166727 - 13166824
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||||||||||| ||||| | |||| |||||||||||||||| |   |||| ||||||||| | |||| |||  | ||||||||| |||||||||||    
T  13166727 ctgtgaactttctgactgacccactagatagaagatcgacacttaagcatgcggatgttatggtctacggatgggttggaggaaaacatgcatgtgtg 13166824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 35310738 - 35310641
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    |||||||||| || ||||| | |||| |||||||||| ||||| ||   ||| |||||||||||||||| |||  | ||||||||| |||||||||||    
T  35310738 ctgtgaacttcctaactgacccactagatagaagatcaacacttaggcttgcggatgttatgatgtacggatgggttggaggaaaacatgcatgtgtg 35310641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 9675134 - 9675034
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtgaa 255  Q
    ||||||||||||| || || | | |||||| |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  9675134 ctgtgaactttctgaccgaccgattaaataaaagatcgacacttagacatgcagatgttatgatgtacgaatgagtaggaggaaaacatgcatgtatgaa 9675035  T
Q  256 c 256  Q
    |    
T  9675034 c 9675034  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 252
Target Start/End: Original strand, 23484755 - 23484851
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgt 252  Q
    |||||||||| || | ||| |||||| |||||||||| |||||||   ||||| ||||||||||||||| |||  ||||||||||| ||||||||||    
T  23484755 ctgtgaacttcctgattgacctactatatagaagatcaacactcaagcatgcatatgttatgatgtacggatgggtaggaggaaaacatgcatgtgt 23484851  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 252
Target Start/End: Complemental strand, 17344928 - 17344832
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgt 252  Q
    ||||||||||||| ||||| |  ||| | |||||||| ||||||||  |||| ||||||||| |||||| |||  ||||||||||| ||||||||||    
T  17344928 ctgtgaactttctgactgacccgctagaaagaagatcaacactcaggcatgcggatgttatggtgtacggatgggtaggaggaaaacatgcatgtgt 17344832  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 19161627 - 19161696
Alignment:
Q  184 atagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgt 252  Q
    |||||||||| ||||||||  |||| |||||||||||||| | |||  ||||||||||| ||||||||||    
T  19161627 atagaagatcaacactcaggcatgcggatgttatgatgtaaggatgggtaggaggaaaacatgcatgtgt 19161696  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 44686708 - 44686636
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatg 229  Q
    ||||||||||| | |||||||||||| ||||||||| |||||| ||   ||| ||||||||| ||||| ||||    
T  44686708 ctgtgaactttgtgactgatctactagatagaagattgacacttaggcctgcggatgttatggtgtacaaatg 44686636  T

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Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 6865631 - 6865727
Alignment:
Q  158 tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    |||||||||||| ||||||||| || ||||||||| |||||| || ||||| |||||||||||||||| |||  ||||||||||| |||||||||||    
T  6865631 tgtgaactttctaactgatctattagatagaagattgacacttaggtatgcggatgttatgatgtacgtatgggtaggaggaaaacatgcatgtgtg 6865727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 3330240 - 3330155
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa 242  Q
    ||||||||||||| ||||| | |||| |||||||||| ||||| ||  |||||||||||||| |||||| ||| || |||||||||    
T  3330240 ctgtgaactttctgactgacccactagatagaagatcaacacttaggcatgcagatgttatggtgtacggatggattggaggaaaa 3330155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 50000742 - 50000839
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||||||||||| ||||| | |||| |||||||||||||||| ||   ||| ||||||||| |||||| |||  | ||||||||| |||||||||||    
T  50000742 ctgtgaactttctgactgacccactagatagaagatcgacacttaggcctgcggatgttatggtgtacggatgggttggaggaaaacatgcatgtgtg 50000839  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 12053696 - 12053604
Alignment:
Q  162 aactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||| || ||||||| |||| |||||||||||| |||  | | ||||||||||||| |||||  |||  ||||||||||| |||||||||||    
T  12053696 aacttcctgactgatccactagatagaagatcgagactttggtctgcagatgttatgttgtacagatgggtaggaggaaaacatgcatgtgtg 12053604  T

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Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 29862065 - 29861987
Alignment:
Q  179 actaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtgaac 256  Q
    |||| |||||||||||||||| ||  |||||||||||||| |||||| |||  ||||||||||| ||||||||||||||    
T  29862065 actagatagaagatcgacacttaggcatgcagatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtgaac 29861987  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 37992621 - 37992537
Alignment:
Q  158 tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa 242  Q
    |||||||||||| ||||| | |||  ||||||||| |||||| || | || ||||||||||||||||| |||  |||||||||||    
T  37992621 tgtgaactttctcactgacccacttgatagaagatggacacttaggtctgtagatgttatgatgtacggatgggtaggaggaaaa 37992537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 39583047 - 39583131
Alignment:
Q  158 tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa 242  Q
    |||||||||||| | ||| | |||| |||||||||||||||| ||  |||| ||||||||  |||||| |||  |||||||||||    
T  39583047 tgtgaactttctgattgacccactagatagaagatcgacacttaggcatgcggatgttatagtgtacggatgggtaggaggaaaa 39583131  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 242
Target Start/End: Original strand, 52411720 - 52411804
Alignment:
Q  158 tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa 242  Q
    |||||||||| | ||||| | |||| ||||||||| ||| || ||   ||||||||||||||||| |||||| | ||||||||||    
T  52411720 tgtgaactttttaactgacccactagatagaagattgacgcttaggcctgcagatgttatgatgtccgaatggacaggaggaaaa 52411804  T

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Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 33220555 - 33220627
Alignment:
Q  184 atagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtgaa 255  Q
    ||||||||| |||||||||   |||||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  33220555 atagaagattgacactcaggcctgcagatgttatgatgtacggatgagttggaggaaaacatgcatgtgtgaa 33220627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 252
Target Start/End: Complemental strand, 32115978 - 32115883
Alignment:
Q  158 tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgt 252  Q
    ||||||||| || ||||| |||||| |||||||||| ||||||||   ||| ||||||||| |||||  |||| ||||||||||| ||||||||||    
T  32115978 tgtgaacttcctgactgacctactagatagaagatcaacactcaggcctgcggatgttatggtgtacagatgagtaggaggaaaacatgcatgtgt 32115883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 28543627 - 28543568
Alignment:
Q  195 acactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||||||  ||||||||||||||||||||  ||| |||||||||||| |||||||||||    
T  28543627 acactcaggcatgcagatgttatgatgtacagatggataggaggaaaacatgcatgtgtg 28543568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 253
Target Start/End: Complemental strand, 34304796 - 34304689
Alignment:
Q  148 aaggagacgc-tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atg 245  Q
    |||||||||| |||||||||||| ||||| | |||| |||||||||||||||| ||   ||| ||||||||| |||||| |||    ||||||||| |||    
T  34304796 aaggagacgcatgtgaactttctgactgacccactagatagaagatcgacacttaggcctgcggatgttatggtgtacggatgggctggaggaaaacatg 34304697  T
Q  246 catgtgtg 253  Q
    ||||||||    
T  34304696 catgtgtg 34304689  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 357535 - 357600
Alignment:
Q  158 tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgta 223  Q
    |||||||||| | |||||   |||| |||||||||||||||| || ||||||||||||||| ||||    
T  357535 tgtgaactttttgactgacacactagatagaagatcgacacttaggtatgcagatgttatggtgta 357600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 45613649 - 45613755
Alignment:
Q  148 aaggagacg-ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atg 245  Q
    ||||||||| |||||||||| || ||||| |  ||| | |||||||| ||||||||   ||| ||||||||||||||||||||  ||||||||||| |||    
T  45613649 aaggagacgtctgtgaacttcctgactgacccgctagaaagaagatcaacactcaggcctgcggatgttatgatgtacgaatgggtaggaggaaaacatg 45613748  T
Q  246 catgtgt 252  Q
    |||||||    
T  45613749 catgtgt 45613755  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 10905390 - 10905295
Alignment:
Q  160 tgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtgaac 256  Q
    |||||||||||  ||||| |||| ||| |||||||||||| ||   |||||||||  || |||||| ||| |||||||||||| ||||||||||||||    
T  10905390 tgaactttcttgttgatccactagatataagatcgacacttaggcctgcagatgt--tggtgtacggatggataggaggaaaacatgcatgtgtgaac 10905295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 5825561 - 5825464
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||||||||||| | ||| | |||| |||||||||||||||  ||   ||| ||||||||| ||||||||||  | ||||||||| |||||||||||    
T  5825561 ctgtgaactttctgattgacccactagatagaagatcgacacataggcctgcggatgttatggtgtacgaatgggttggaggaaaacatgcatgtgtg 5825464  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 28517104 - 28517189
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa 242  Q
    ||||||||||||| ||||| | |||| |||||||||||||||| ||   |||| |||||||| |||||| |||  | |||||||||    
T  28517104 ctgtgaactttctgactgacccactagatagaagatcgacacttaggcctgcaaatgttatggtgtacggatgggttggaggaaaa 28517189  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 983237 - 983161
Alignment:
Q  159 gtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaatagg 235  Q
    |||||||| || ||||| | |||| |||||||||| ||||||||  || | || |||||||||||||||||| ||||    
T  983237 gtgaacttcctaactgacccactagatagaagatcaacactcaggcatccggaagttatgatgtacgaatgagtagg 983161  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 39434957 - 39434860
Alignment:
Q  157 ctgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||||||||||| ||||| | |||| |||||||||||||||| || | ||  ||||||||| |||||| |||  | ||||||||| |||||||||||    
T  39434957 ctgtgaactttctgactgacccactagatagaagatcgacacttaggtctgtcgatgttatggtgtacggatgggttggaggaaaacatgcatgtgtg 39434860  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 35739832 - 35739901
Alignment:
Q  185 tagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa-atgcatgtgtg 253  Q
    ||||||||| ||||| ||  |||||||||||||| |||| |||||  ||||||||||| |||||||||||    
T  35739832 tagaagatcaacacttaggcatgcagatgttatggtgtatgaatgggtaggaggaaaacatgcatgtgtg 35739901  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 34644855 - 34644790
Alignment:
Q  158 tgtgaactttcttactgatctactaaatagaagatcgacactcagatatgcagatgttatgatgta 223  Q
    |||||||||||| ||||| | |||| |||||||||||||||| || ||||| ||||||||| ||||    
T  34644855 tgtgaactttctgactgacccactagatagaagatcgacacttaggtatgcggatgttatggtgta 34644790  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 33521 - 33456
Alignment:
Q  177 ctactaaatagaagatcgacactcagatatgcagatgttatgatgtacgaatgaataggaggaaaa 242  Q
    |||||| |||||||||| ||||||||  |||| ||||||||| |||||| |||  |||||||||||    
T  33521 ctactagatagaagatcaacactcaggcatgcggatgttatggtgtacggatgggtaggaggaaaa 33456  T

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