View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18757_low_76 (Length: 222)
Name: NF18757_low_76
Description: NF18757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18757_low_76 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 35557654 - 35557461
Alignment:
| Q |
22 |
atgctacaactaaaatatcatgtatgcttaagt-ataatgtgtcactaactcactgttgttttgacaaatgctatactctaaagcttcaacaaaattaca |
120 |
Q |
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| T |
35557654 |
atgctacaactaaaatatcatgtatgcttaagttataatgtgtcagtaactcactgttgttttgacgaatgttatactctaaagcttcaacaaaattaca |
35557555 |
T |
|
| Q |
121 |
gtgttgccgtaatttcatcaaaatcaccttgatttccacatgcaccgaaacacaggtagattttatttgcaacttctctttttatccacaggtt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35557554 |
atgttgccgtaatttcatcaaaatcaccttgatttccacatgcactgaaacacaggtagattttatttgcaacttctctttttatccactggtt |
35557461 |
T |
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