View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18758_low_8 (Length: 306)
Name: NF18758_low_8
Description: NF18758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18758_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 17 - 259
Target Start/End: Original strand, 51729505 - 51729747
Alignment:
| Q |
17 |
tggaactgtccaatgcaaagtccttatcaacatggtgcatggttttccttcaattccttcaaaaacaaagtcagcactagttatattttttga-caaagc |
115 |
Q |
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| T |
51729505 |
tggaactgtccaatgcaaagtccttatcaacatggtgcatggttttccttcaattccttcaaaaacaaagtcagcactagttatatttttttaacaaagc |
51729604 |
T |
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| Q |
116 |
aattaattacttatacttgtaaatgttgatgtttacgaaacaaaagaaagaattgtagtttgacaaattaaataatgtctacttttttccaacnnnnnnn |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
51729605 |
aattaattacttatacttgtaaatgttgatgtttacgaaacaaaagaaagaattgtagtttgacaaattaaataatgtcgacttttttccaac-tttttt |
51729703 |
T |
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| Q |
216 |
nnnactagtgtaaaactggcacacgtggctctaatttatgtggg |
259 |
Q |
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| T |
51729704 |
tttactagtgtaaaactggcacacgtggctctaatttatgtggg |
51729747 |
T |
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