View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18759_low_2 (Length: 512)

Name: NF18759_low_2
Description: NF18759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18759_low_2
NF18759_low_2
[»] chr5 (23 HSPs)
chr5 (18-283)||(8686433-8686698)
chr5 (330-507)||(8686705-8686882)
chr5 (219-271)||(3966511-3966561)
chr5 (219-319)||(28588627-28588725)
chr5 (219-271)||(6471890-6471940)
chr5 (219-271)||(17925173-17925223)
chr5 (219-271)||(22423813-22423863)
chr5 (219-271)||(30502389-30502439)
chr5 (219-271)||(30542732-30542782)
chr5 (219-270)||(23012410-23012459)
chr5 (217-268)||(30098332-30098381)
chr5 (240-331)||(30098979-30099070)
chr5 (219-328)||(21576689-21576796)
chr5 (219-276)||(32630731-32630786)
chr5 (219-264)||(32766951-32766994)
chr5 (222-274)||(15086482-15086532)
chr5 (219-271)||(16203796-16203846)
chr5 (219-271)||(36838551-36838601)
chr5 (219-271)||(41091258-41091308)
chr5 (238-271)||(42029777-42029810)
chr5 (239-271)||(18592099-18592131)
chr5 (219-270)||(19737484-19737533)
chr5 (219-270)||(38749565-38749614)
[»] chr6 (32 HSPs)
chr6 (219-328)||(33001233-33001340)
chr6 (219-271)||(9617442-9617492)
chr6 (220-271)||(9629392-9629441)
chr6 (222-328)||(13360317-13360420)
chr6 (219-271)||(7265594-7265644)
chr6 (223-271)||(7377991-7378037)
chr6 (219-271)||(9025495-9025545)
chr6 (219-267)||(30866149-30866195)
chr6 (219-271)||(19040360-19040410)
chr6 (219-271)||(20371111-20371161)
chr6 (219-270)||(7086803-7086852)
chr6 (219-270)||(32299283-32299332)
chr6 (217-271)||(5732511-5732563)
chr6 (219-271)||(30851610-30851658)
chr6 (217-271)||(32320670-32320722)
chr6 (238-271)||(7027267-7027300)
chr6 (219-271)||(7996379-7996429)
chr6 (219-271)||(8022372-8022422)
chr6 (219-271)||(9027186-9027236)
chr6 (219-271)||(9195755-9195805)
chr6 (219-271)||(10294115-10294165)
chr6 (219-275)||(15489729-15489783)
chr6 (219-271)||(19044472-19044522)
chr6 (219-271)||(21924936-21924986)
chr6 (223-271)||(26562701-26562747)
chr6 (219-271)||(34073348-34073398)
chr6 (217-260)||(5462692-5462733)
chr6 (219-270)||(9658887-9658936)
chr6 (223-266)||(11591876-11591917)
chr6 (239-271)||(12690442-12690474)
chr6 (219-274)||(13851744-13851797)
chr6 (217-271)||(31579228-31579278)
[»] chr3 (19 HSPs)
chr3 (216-328)||(25093507-25093617)
chr3 (238-293)||(35222963-35223018)
chr3 (219-271)||(7928458-7928508)
chr3 (219-295)||(35160728-35160802)
chr3 (219-274)||(40150569-40150622)
chr3 (221-271)||(8789551-8789599)
chr3 (219-261)||(9624649-9624689)
chr3 (241-271)||(13414497-13414527)
chr3 (217-270)||(24633403-24633454)
chr3 (219-271)||(8039836-8039886)
chr3 (219-271)||(8383265-8383315)
chr3 (219-271)||(11665952-11666002)
chr3 (223-271)||(13807181-13807227)
chr3 (219-271)||(20691327-20691377)
chr3 (217-265)||(32804547-32804593)
chr3 (238-271)||(40993336-40993369)
chr3 (219-271)||(48202270-48202320)
chr3 (219-271)||(49505155-49505205)
chr3 (217-264)||(16192758-16192803)
[»] chr7 (25 HSPs)
chr7 (239-328)||(3554450-3554539)
chr7 (219-318)||(20549799-20549896)
chr7 (219-274)||(24146824-24146877)
chr7 (221-271)||(9482944-9482992)
chr7 (219-272)||(19206058-19206109)
chr7 (224-271)||(22602711-22602756)
chr7 (219-274)||(42720888-42720941)
chr7 (219-269)||(3520345-3520393)
chr7 (217-271)||(7438712-7438764)
chr7 (217-267)||(26329387-26329435)
chr7 (238-276)||(640138-640176)
chr7 (221-271)||(11272587-11272637)
chr7 (218-271)||(35297673-35297724)
chr7 (219-268)||(38134410-38134457)
chr7 (218-271)||(38143230-38143281)
chr7 (219-271)||(3721101-3721151)
chr7 (219-271)||(5835255-5835305)
chr7 (219-271)||(7328692-7328742)
chr7 (219-271)||(16341504-16341554)
chr7 (219-271)||(19992009-19992059)
chr7 (219-271)||(32308128-32308178)
chr7 (219-270)||(15902830-15902879)
chr7 (219-270)||(17851439-17851488)
chr7 (219-270)||(23849460-23849509)
chr7 (217-268)||(27732243-27732292)
[»] chr4 (17 HSPs)
chr4 (219-271)||(35723385-35723436)
chr4 (218-271)||(5775359-5775410)
chr4 (219-271)||(7214523-7214573)
chr4 (219-271)||(33950144-33950194)
chr4 (220-295)||(9996849-9996922)
chr4 (217-263)||(22440609-22440653)
chr4 (217-262)||(903928-903971)
chr4 (219-264)||(36635332-36635375)
chr4 (241-274)||(5555130-5555163)
chr4 (219-271)||(8423719-8423769)
chr4 (219-271)||(24613702-24613752)
chr4 (219-319)||(28964201-28964299)
chr4 (219-267)||(40613458-40613504)
chr4 (219-271)||(54580024-54580074)
chr4 (219-270)||(18513243-18513292)
chr4 (219-266)||(19230315-19230360)
chr4 (238-270)||(56110831-56110863)
[»] chr8 (21 HSPs)
chr8 (214-328)||(3025554-3025666)
chr8 (219-269)||(31236580-31236628)
chr8 (219-271)||(12606830-12606880)
chr8 (216-271)||(11927087-11927140)
chr8 (216-271)||(33405385-33405438)
chr8 (218-276)||(4786334-4786390)
chr8 (219-271)||(12985400-12985450)
chr8 (219-271)||(13844597-13844647)
chr8 (219-271)||(14134707-14134757)
chr8 (219-271)||(34897093-34897143)
chr8 (216-271)||(11944670-11944723)
chr8 (238-270)||(18964202-18964234)
chr8 (216-270)||(11803264-11803316)
chr8 (216-265)||(8798838-8798885)
chr8 (238-271)||(8847281-8847314)
chr8 (219-271)||(20679396-20679446)
chr8 (238-271)||(26902176-26902209)
chr8 (219-267)||(27213555-27213601)
chr8 (219-271)||(29447111-29447161)
chr8 (219-270)||(7658471-7658520)
chr8 (219-262)||(34201056-34201097)
[»] chr2 (22 HSPs)
chr2 (238-328)||(20242671-20242761)
chr2 (219-271)||(5367200-5367250)
chr2 (219-271)||(44860328-44860378)
chr2 (219-270)||(18420436-18420485)
chr2 (219-270)||(44605141-44605190)
chr2 (219-269)||(23718034-23718082)
chr2 (219-269)||(24105706-24105754)
chr2 (219-276)||(18276529-18276584)
chr2 (219-272)||(18889591-18889642)
chr2 (219-264)||(21616770-21616813)
chr2 (219-268)||(30471046-30471093)
chr2 (216-265)||(35449518-35449565)
chr2 (217-270)||(39279681-39279732)
chr2 (219-271)||(18570980-18571030)
chr2 (216-268)||(30527599-30527649)
chr2 (219-271)||(34691806-34691856)
chr2 (219-271)||(34714218-34714268)
chr2 (219-271)||(37411245-37411295)
chr2 (223-271)||(45000847-45000893)
chr2 (219-271)||(5040740-5040792)
chr2 (239-271)||(34993983-34994015)
chr2 (224-271)||(38355888-38355933)
[»] chr1 (25 HSPs)
chr1 (217-270)||(1864882-1864933)
chr1 (219-271)||(6427358-6427408)
chr1 (219-274)||(36878469-36878522)
chr1 (221-271)||(44482240-44482288)
chr1 (219-271)||(7918212-7918262)
chr1 (219-271)||(9709828-9709878)
chr1 (219-271)||(40181879-40181929)
chr1 (221-271)||(25361896-25361944)
chr1 (219-264)||(17425101-17425144)
chr1 (219-328)||(22515831-22515938)
chr1 (226-271)||(34371728-34371771)
chr1 (219-271)||(1486710-1486760)
chr1 (219-271)||(9828052-9828102)
chr1 (219-271)||(14332643-14332693)
chr1 (219-271)||(20157351-20157401)
chr1 (238-271)||(29163382-29163415)
chr1 (238-271)||(30749865-30749898)
chr1 (238-271)||(30771316-30771349)
chr1 (219-271)||(38078662-38078712)
chr1 (219-271)||(38503328-38503378)
chr1 (219-271)||(5944289-5944341)
chr1 (219-270)||(10233261-10233310)
chr1 (219-270)||(10572591-10572640)
chr1 (238-270)||(13997908-13997940)
chr1 (221-264)||(25098563-25098604)
[»] scaffold0110 (1 HSPs)
scaffold0110 (217-270)||(28856-28907)
[»] scaffold0036 (1 HSPs)
scaffold0036 (219-271)||(9748-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (219-271)||(135313-135363)
[»] scaffold0376 (1 HSPs)
scaffold0376 (240-271)||(6339-6370)
[»] scaffold0123 (1 HSPs)
scaffold0123 (223-268)||(44529-44572)
[»] scaffold0044 (1 HSPs)
scaffold0044 (220-269)||(53189-53236)
[»] scaffold0022 (1 HSPs)
scaffold0022 (219-271)||(99901-99951)
[»] scaffold0011 (1 HSPs)
scaffold0011 (219-271)||(240022-240072)
[»] scaffold0085 (1 HSPs)
scaffold0085 (219-266)||(26401-26446)


Alignment Details
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 8686433 - 8686698
Alignment:
Q  18 agaagttaacaaggagataagaaactcaataagtaccgaccaaaactaactcctttgctattgcctatttgctatttaagaatctcattccataacattt 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8686433 agaagttaacaaggggataagaaactcaataagtaccgaccaaaactaactactttgctattgcctatttgctatttaagaatttcattccataacattt 8686532  T
Q  118 tgaaatcacttatattagttaccactgttggtgaaaagtaaattgttggaaaagagaaattctgcagagatctatgaagcagaaacatttgacatgattg 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8686533 tgaaatcacttatattagttaccactgttggtgaaaagtaaattgttggaaaagagaaattctgcagagatctatgaagcagaaacatctgacatgattg 8686632  T
Q  218 ttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacact 283  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| | ||||||    
T  8686633 ttaataatttgagaaaatcacacatagttcagtgtaattatatttgtcggtgtctgacacaacact 8686698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 330 - 507
Target Start/End: Original strand, 8686705 - 8686882
Alignment:
Q  330 taaagatgaattcatggttggtcttttatatggttgcatatgaaggtttggcataaatagtaccttagataagaagtaataggtggtgatatacatgtac 429  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8686705 taaagatgaattcatggttggtcttttatatggttgtatatgaaggtttggcataaatagtaccttagataagaagtaataggtggtgatatacatgtac 8686804  T
Q  430 aagtaatttgtgatgatggataagaagtctaatcagcatatcaaaactgagatacagggtgatatgatcacatggatt 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8686805 aagtaatttgtgatgatggataagaagtctaatcagcatatcaaaactgaggtacagggtgatatgatcacatggatt 8686882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 3966511 - 3966561
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  3966511 taataatttgagaaaatcacaca--attcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 28588725 - 28588627
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtg 318  Q
    |||||||||||||||||||||  ||||||| |||||||||| ||||||||||| || |  |||| ||||||||||   || |||  ||||||||||||||    
T  28588725 taataatttgagaaaatcaca--taattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtg 28588628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 6471940 - 6471890
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||| ||||||    
T  6471940 taataatttgagaaaatcaca--taattcagtgtaattatatgtgtgggtgtc 6471890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 17925223 - 17925173
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||| |||||||||||  |||||||||||||| |||||||||||||||    
T  17925223 taataatttaagaaaatcaca--taattcaatgtaataatatgtgtcggtgtc 17925173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 22423863 - 22423813
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||||| ||||||||| ||||||||||    
T  22423863 taataatttgagaaaatcaca--taattcaatataattatatatgtcggtgtc 22423813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 30502439 - 30502389
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||   ||||||| ||||||||||||||||||||||    
T  30502439 taataatttgagaaaatcact--taattcagtgtaattatatgtgtcggtgtc 30502389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 30542782 - 30542732
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||   ||||||| ||||||||||||||||||||||    
T  30542782 taataatttgagaaaatcact--taattcagtgtaattatatgtgtcggtgtc 30542732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 23012459 - 23012410
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||||||||||| |  ||||| |||||||||||||||||||||||    
T  23012459 taataatttgagaaaatcata--taatttaatgtaattatatgtgtcggtgt 23012410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 30098332 - 30098381
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggt 268  Q
    |||||||||||||||||||  ||||||||||||||||||||||  |||||||    
T  30098332 gttaataatttgagaaaat--cacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 30099070 - 30098979
Alignment:
Q  240 cataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtgtttgtgcttcgta 331  Q
    ||||||||  |||||||||||||||||||||| ||||  |||| | |||||||| | || ||| || |||| | ||||||| ||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttcgta 30098979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 21576796 - 21576689
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtg 318  Q
    ||||||||||| |||||||||  ||||||| |||||||| | |||||| |||| || |  |||| | |||||||||| || ||| ||||||||| |||||    
T  21576796 taataatttgaaaaaatcaca--taattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtg 21576699  T
Q  319 tttgtgcttc 328  Q
    |  |||||||    
T  21576698 tccgtgcttc 21576689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 32630786 - 32630731
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgata 276  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||| ||||| ||||    
T  32630786 taataatttgagaaaattata--taattcaatgtaattatatgtgtcagtgtcggata 32630731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 32766994 - 32766951
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgt 264  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||    
T  32766994 taataatttgagaaaatcgcaca--attcaatgtaattatatgtgt 32766951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 15086482 - 15086532
Alignment:
Q  222 taatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctga 274  Q
    |||||||||||||||| |  ||||  |||||||||||||||||||||||||||    
T  15086482 taatttgagaaaatcata--taatgtaatgtaattatatgtgtcggtgtctga 15086532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 16203846 - 16203796
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||| ||  ||||| | ||||||||||||||||||||||    
T  16203846 taataatttgagaaaatctca--taatttagtgtaattatatgtgtcggtgtc 16203796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 36838551 - 36838601
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| |||  ||||| | ||||||||||||||||||||||    
T  36838551 taataatttgagaaaattaca--taatttagtgtaattatatgtgtcggtgtc 36838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 41091308 - 41091258
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||||| ||||    
T  41091308 taatgatttgagaaaatcaca--taattcagtgtaattatatgtgtcgatgtc 41091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 42029777 - 42029810
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||||||| ||||||||    
T  42029777 cacataattcaatgtaattatatgtatcggtgtc 42029810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 271
Target Start/End: Original strand, 18592099 - 18592131
Alignment:
Q  239 acataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||||||| |||||||    
T  18592099 acataattcaatgtaattatatgtgccggtgtc 18592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 19737533 - 19737484
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||||||||| |||  |||||||||| ||| ||||||||||||||    
T  19737533 taataatttgagaaaattaca--taattcaatgcaatcatatgtgtcggtgt 19737484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 38749614 - 38749565
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||| ||||| |||  ||||||||||||||||||||||| |||||    
T  38749614 taataatttgaaaaaatgaca--taattcaatgtaattatatgtgttggtgt 38749565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 5e-20; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 33001340 - 33001233
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtg 318  Q
    ||||||||||| |||||||||  ||||| |||||||||||||||||||||||| || |  |||| | |||||||| || ||||| ||||||| |||||||    
T  33001340 taataatttgaaaaaatcaca--taattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtg 33001243  T
Q  319 tttgtgcttc 328  Q
    ||||||||||    
T  33001242 tttgtgcttc 33001233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 9617442 - 9617492
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  9617442 taataatttgagaaaatcaca--taattcaatgtaattatatgtgtcggtgtc 9617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 9629392 - 9629441
Alignment:
Q  220 aataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  9629392 aataatttgagaaaatcaca--taattcaatgtaattatatgtgtcggtgtc 9629441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 13360420 - 13360317
Alignment:
Q  222 taatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtgttt 321  Q
    ||||||||||||||||||  ||||||| ||||||||||||| |||||||| || | ||||  | || |||||||||| ||| ||||||||||||||||      
T  13360420 taatttgagaaaatcaca--taattcagtgtaattatatgtttcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtcc 13360324  T
Q  322 gtgcttc 328  Q
    |||||||    
T  13360323 gtgcttc 13360317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 7265644 - 7265594
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  7265644 taataatttgagaaaatcaca--taattcagtgtaattatatgtgtcggtgtc 7265594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 7377991 - 7378037
Alignment:
Q  223 aatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  7377991 aatttgagaaaatcaca--taattcaatgtaattatatgtgtcggtgtc 7378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 9025545 - 9025495
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  9025545 taataatttgagaaaatcaca--taattcagtgtaattatatgtgtcggtgtc 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 30866195 - 30866149
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcgg 267  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  30866195 taataatttgagaaaatcaca--taattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 19040360 - 19040410
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||| |||||    
T  19040360 taataatttgagaaaatcaca--taattcagtgtaattatatgtgtctgtgtc 19040410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 20371161 - 20371111
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||| ||||||| ||||||||||||||||||    
T  20371161 taataatttgagaaaatcaca--taactcaatgtgattatatgtgtcggtgtc 20371111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 7086803 - 7086852
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||||||||||||||||||  ||||| | |||||||||||||||||||||    
T  7086803 taataatttgagaaaatcaca--taatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 32299283 - 32299332
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||||||||||||||||||  |||||||||||| ||||| ||||||||||    
T  32299283 taataatttgagaaaatcaca--taattcaatgtagttatacgtgtcggtgt 32299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 5732563 - 5732511
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||  |||||| || | ||||||||||||||||||||||    
T  5732563 gttaataatttgagaaaat--cacatattttagtgtaattatatgtgtcggtgtc 5732511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 30851610 - 30851658
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||| |||||||||||    ||||||||||||||||||||||||||||    
T  30851610 taataatttaagaaaatcaca----attcaatgtaattatatgtgtcggtgtc 30851658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 32320722 - 32320670
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||| |||||||||  ||||||||||| ||||||||| ||||||||    
T  32320722 gttaataatttgataaaatcaca--taattcaatgtcattatatgtatcggtgtc 32320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 7027267 - 7027300
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||||||||||||||||||    
T  7027267 cacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 7996429 - 7996379
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||| |  ||||||| |||||||||||| |||||||||    
T  7996429 taataatttgagaaaatcata--taattcagtgtaattatatgcgtcggtgtc 7996379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 8022372 - 8022422
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||| |  ||||||| |||||||||||| |||||||||    
T  8022372 taataatttgagaaaatcata--taattcagtgtaattatatgcgtcggtgtc 8022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 9027186 - 9027236
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||| |||||||  ||||||  ||||||||||||||||||||||    
T  9027186 taataatttgagataatcaca--taattccgtgtaattatatgtgtcggtgtc 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 9195805 - 9195755
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| |||  ||||| | ||||||||||||||||||||||    
T  9195805 taataatttgagaaaatgaca--taatttagtgtaattatatgtgtcggtgtc 9195755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 10294115 - 10294165
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||| |||| || ||  |||||||||||||||||||||||||||    
T  10294115 taataatttgagataatcgcatat--ttcaatgtaattatatgtgtcggtgtc 10294165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 15489783 - 15489729
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgat 275  Q
    ||||||||||| ||||| |||||  |||||||||||||| | |||||||||||||||    
T  15489783 taataatttgaaaaaattacaca--attcaatgtaattacaagtgtcggtgtctgat 15489729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 19044472 - 19044522
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||| ||||||  ||||||| ||| ||||||||||||||||||    
T  19044472 taataatttgagaatatcaca--taattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 21924986 - 21924936
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||| |||| |  ||||||| ||||||||||||||||||||||    
T  21924986 taataatttgagaatatcaaa--taattcagtgtaattatatgtgtcggtgtc 21924936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 26562701 - 26562747
Alignment:
Q  223 aatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||  ||||||| ||||||||||||||||| ||||    
T  26562701 aatttgagaaaatcaca--taattcagtgtaattatatgtgtcgatgtc 26562747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 34073398 - 34073348
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||| ||  ||||||| |||||||||||| |||||||||    
T  34073398 taataatttgagaaaatctca--taattcagtgtaattatatgggtcggtgtc 34073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 5462692 - 5462733
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatat 260  Q
    |||||||||||||||||||  ||||||||||| |||||||||||    
T  5462692 gttaataatttgagaaaat--cacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 9658887 - 9658936
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||| |||||||||||  ||||||| ||||||||||| |||||||||    
T  9658887 taataatttaagaaaatcaca--taattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  223 aatttgagaaaatcacacataattcaatgtaattatatgtgtcg 266  Q
    |||||||||||||||||  ||||||| |||||||||||||||||    
T  11591917 aatttgagaaaatcaca--taattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 271
Target Start/End: Original strand, 12690442 - 12690474
Alignment:
Q  239 acataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||||||||| ||||    
T  12690442 acataattcaatgtaattatatgtgtcgatgtc 12690474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 13851744 - 13851797
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctga 274  Q
    ||||||||||||||||| ||   ||||||| ||||||||||||||||| |||||||    
T  13851744 taataatttgagaaaataacg--taattcagtgtaattatatgtgtcgatgtctga 13851797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 31579278 - 31579228
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||  ||||||||||| ||||||  ||||||||||||||    
T  31579278 gttaataatttgagaaaat--cacataattcagtgtaat--tatgtgtcggtgtc 31579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 328
Target Start/End: Original strand, 25093507 - 25093617
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaaga 315  Q
    ||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||| || | ||||| | || ||||||||   || ||||||| |||||    
T  25093507 tgttaatgatttgagaaaatcacaca--attcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacactgaagcacttctaatctgaaga 25093604  T
Q  316 gtgtttgtgcttc 328  Q
    ||||| |||||||    
T  25093605 gtgttcgtgcttc 25093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 35222963 - 35223018
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacac 293  Q
    |||||||||||||||||||||||||||||||||| || || |||| | ||||||||    
T  35222963 cacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacac 35223018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 7928458 - 7928508
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  7928458 taataatttgaaaaaatcaca--taattcagtgtaattatatgtgtcggtgtc 7928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 35160728 - 35160802
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactg 295  Q
    |||||||||||| |||| |||  ||||||||||||   |||||||||||||||||||| || || ||||||||||||    
T  35160728 taataatttgagtaaataaca--taattcaatgtagccatatgtgtcggtgtctgatacaatacatatctgacactg 35160802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 40150622 - 40150569
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctga 274  Q
    ||||||||||||||||| | |  |||||||||||||| ||||||||||||||||||    
T  40150622 taataatttgagaaaatgata--taattcaatgtaatcatatgtgtcggtgtctga 40150569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 8789599 - 8789551
Alignment:
Q  221 ataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||  ||||||  ||||||||||||||||||||||    
T  8789599 ataatttgagaaaatcaca--taattccgtgtaattatatgtgtcggtgtc 8789551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 9624649 - 9624689
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatg 261  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  9624649 taataatttgagaaaatcaca--taattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 271
Target Start/End: Original strand, 13414497 - 13414527
Alignment:
Q  241 ataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||||||||||||    
T  13414497 ataattcaatgtaattatatgtgtcggtgtc 13414527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 24633454 - 24633403
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||||  ||||||||   |||||||||||||||||||||||||||||    
T  24633454 gttaataatttggaaaaatcacg--taattcaatgtaattatatgtgtcggtgt 24633403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 8039886 - 8039836
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| | |  ||||||| ||||||||||||||||||||||    
T  8039886 taataatttgagaaaattata--taattcagtgtaattatatgtgtcggtgtc 8039836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 8383265 - 8383315
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||| |  ||||||| |||||||||| |||||||||||    
T  8383265 taataatttgagaaaatcata--taattcagtgtaattataagtgtcggtgtc 8383315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 11665952 - 11666002
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| |||||||||||  ||| | ||||||||||||||||||||||    
T  11665952 taataatttgataaaatcacaca--atttagtgtaattatatgtgtcggtgtc 11666002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 13807181 - 13807227
Alignment:
Q  223 aatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||  ||||||||| |||| |||||||||||||||    
T  13807181 aatttgagaaaatcaca--taattcaatataataatatgtgtcggtgtc 13807227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 20691327 - 20691377
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| |||  ||||||| |||||| |||||||||||||||    
T  20691327 taataatttgagaaaatgaca--taattcagtgtaatcatatgtgtcggtgtc 20691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 32804593 - 32804547
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtc 265  Q
    |||||||||||||||||||  ||||||||| | ||||||||||||||||    
T  32804593 gttaataatttgagaaaat--cacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 40993369 - 40993336
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||||||||||||||||||    
T  40993369 cacataattcagtgtaattatatgtgtcggtgtc 40993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 48202320 - 48202270
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||| |||||||||||||||  ||||| |||||||||||||||||| |||||    
T  48202320 taatagtttgagaaaatcaca--taatttaatgtaattatatgtgtctgtgtc 48202270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 49505205 - 49505155
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| | |||||||||||||||| |||||    
T  49505205 taataatttgagaaaatcaca--taatttagtgtaattatatgtgtcagtgtc 49505155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 16192803 - 16192758
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgt 264  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  16192803 gttaataatttgagaaaataaca--taattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 3554539 - 3554450
Alignment:
Q  239 acataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtgtttgtgcttc 328  Q
    |||||||| ||||||||||||  |||||||||| || |  |||| ||||| ||||||||| ||||||||| |||||||||| ||||||||    
T  3554539 acataatttaatgtaattatagatgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgtctgtgcttc 3554450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 20549799 - 20549896
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtg 318  Q
    ||||||||||||||||||||   ||||||| |||||||||||||||||||||| || | ||||| | || |||| ||||| ||| ||||||||| |||||    
T  20549799 taataatttgagaaaatcacg--taattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtg 20549896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 24146824 - 24146877
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctga 274  Q
    ||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||    
T  24146824 taataattttagaaaatcaca--taattcaatataattatatgtgtcggtgtctga 24146877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 9482944 - 9482992
Alignment:
Q  221 ataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  9482944 ataatttgagaaaatcacaca--attcagtgtaattatatgtgtcggtgtc 9482992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 19206058 - 19206109
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtct 272  Q
    |||||||||||||||||||||  ||||||| | |||||||||||||||||||||    
T  19206058 taataatttgagaaaatcaca--taattcattataattatatgtgtcggtgtct 19206109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 22602756 - 22602711
Alignment:
Q  224 atttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  22602756 atttgagaaaatcaca--taattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 42720941 - 42720888
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctga 274  Q
    ||||||||||| |||||||||  ||||| |||||||||||||||||| ||||||||    
T  42720941 taataatttgaaaaaatcaca--taattaaatgtaattatatgtgtcagtgtctga 42720888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 3520393 - 3520345
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtg 269  Q
    |||| |||||||||||||| |  ||||||||||||||||||||||||||||    
T  3520393 taatcatttgagaaaatcata--taattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 7438712 - 7438764
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||| |||||||||  |||||||||||||||| | |||||||||||    
T  7438712 gttaataatttgaaaaaatcaca--taattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 26329435 - 26329387
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcgg 267  Q
    |||||||||||||||||| ||||||  ||||| ||||||||||||||||||    
T  26329435 gttaataatttgagaaaaacacaca--attcagtgtaattatatgtgtcgg 26329387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 276
Target Start/End: Original strand, 640138 - 640176
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtctgata 276  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  640138 cacataattcagtgtaattatatgtgtcggtgtcagata 640176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 11272637 - 11272587
Alignment:
Q  221 ataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||| ||||||||| |||||||| |||||||| | |||||||||||    
T  11272637 ataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtc 11272587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 35297724 - 35297673
Alignment:
Q  218 ttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||||  ||||||| | ||||||||||||| ||||||    
T  35297724 ttaataatttgagaaaatcaca--taattcattataattatatgtgttggtgtc 35297673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 38134457 - 38134410
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggt 268  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||||||    
T  38134457 taataatttgagaaaatgaca--taattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 38143230 - 38143281
Alignment:
Q  218 ttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||| |||||||||  ||||| ||||||||||||||||| ||||||    
T  38143230 ttaataatttgaaaaaatcaca--taatttaatgtaattatatgtgttggtgtc 38143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 3721101 - 3721151
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| | | ||||||||||||||||||||    
T  3721101 taataatttgagaaaatcaca--taatttagtataattatatgtgtcggtgtc 3721151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 5835255 - 5835305
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||    
T  5835255 taatagtttgagaaaataaca--taattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 7328742 - 7328692
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| |||  ||||| | ||||||||||||||||||||||    
T  7328742 taataatttgagaaaataaca--taatttagtgtaattatatgtgtcggtgtc 7328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 16341504 - 16341554
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| | |||||||||||||| |||||||    
T  16341504 taataatttgagaaaatcaca--taattaagtgtaattatatgtgccggtgtc 16341554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 19992009 - 19992059
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||| ||  |||| |||||||||| |||||||||||    
T  19992009 taataatttgagaaaatcacatat--ttcagtgtaattataagtgtcggtgtc 19992059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 32308128 - 32308178
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||| |||||||| |||||    
T  32308128 taataatttgagaaaatcaca--taattcagtgtaattgtatgtgtcagtgtc 32308178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 15902830 - 15902879
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||| |||||||||  ||||| | |||||||||||||||||||||    
T  15902830 taataatttgataaaatcaca--taatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 17851439 - 17851488
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||| |||||||||||  ||||||| |||||||||||||||| ||||    
T  17851439 taataattttagaaaatcaca--taattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 23849509 - 23849460
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||| ||||||  |||||||||||| | |||||||||||||||||||    
T  23849509 taataatttaagaaaa--acacataattcagtataattatatgtgtcggtgt 23849460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 27732292 - 27732243
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggt 268  Q
    ||||||||||| ||||||| |||  ||||||| |||||||||||||||||||    
T  27732292 gttaataatttaagaaaattaca--taattcagtgtaattatatgtgtcggt 27732243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 35723436 - 35723385
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  35723436 taataatttgagaaaat-acacataattcaatgtaattatatgtgtcagtgtc 35723385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 5775410 - 5775359
Alignment:
Q  218 ttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||||||||    
T  5775410 ttaataatttgagaaaatcaca--taattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 7214573 - 7214523
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| |||||||||||||| |||||||||    
T  7214573 taataatttgagaaaatcaca--taatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 33950144 - 33950194
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| |||||||| |||||||||||||||    
T  33950144 taataatttgagaaaatcaca--taatttaatgtaatcatatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 9996849 - 9996922
Alignment:
Q  220 aataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactg 295  Q
    ||||||||||||||||||||  ||||||| | ||||||||||| |||||||| || ||||||| | || |||||||    
T  9996849 aataatttgagaaaatcaca--taattcagtataattatatgtctcggtgtcagacataacacgtgtccgacactg 9996922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 22440653 - 22440609
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtg 263  Q
    |||||||||||||||||||  ||||||||||| ||||||||||||||    
T  22440653 gttaataatttgagaaaat--cacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 903928 - 903971
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgt 262  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||    
T  903928 gttaataatttgagaaaat--cacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 36635332 - 36635375
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgt 264  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||    
T  36635332 taataatttgagaaaatcaca--taattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 5555163 - 5555130
Alignment:
Q  241 ataattcaatgtaattatatgtgtcggtgtctga 274  Q
    |||||| |||||||||||||||||||||||||||    
T  5555163 ataatttaatgtaattatatgtgtcggtgtctga 5555130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 8423769 - 8423719
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||||||  ||||||||||    
T  8423769 taataatttgagaaaatcaca--taattcagtgtaattataaatgtcggtgtc 8423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 24613752 - 24613702
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||||||||| || | |||||||||||    
T  24613752 taataatttgagaaaatcaca--taattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 28964299 - 28964201
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtg 318  Q
    ||||||||||| |||||||||  ||||||| |||||||| | ||||| ||||| || |  |||| |||| ||||||| || ||| ||||||||| |||||    
T  28964299 taataatttgaaaaaatcaca--taattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtg 28964202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 40613458 - 40613504
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcgg 267  Q
    ||||| |||||||||||||||  ||||||| ||||||||||||||||||    
T  40613458 taatattttgagaaaatcaca--taattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 54580074 - 54580024
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| |||||||||  ||||||| |||||||||| |||||||||||    
T  54580074 taataatttgaaaaaatcaca--taattcagtgtaattataagtgtcggtgtc 54580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 18513292 - 18513243
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||| ||||    
T  18513292 taataatttgagaaaatgaca--taattcaatgtaatcatatgtgtcagtgt 18513243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 19230360 - 19230315
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcg 266  Q
    ||||||||||||||||| |||  |||||||||||||||||| ||||||    
T  19230360 taataatttgagaaaataaca--taattcaatgtaattataggtgtcg 19230315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 56110831 - 56110863
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||||| |||||||||||||||||||    
T  56110831 cacataattcaatataattatatgtgtcggtgt 56110863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 3025554 - 3025666
Alignment:
Q  214 attgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaa 313  Q
    |||| |||||||||||||||||||||  ||||||| |||||||||| ||||| ||||| || |  |||| | |||||||||| || ||| |||||||||     
T  3025554 attgctaataatttgagaaaatcaca--taattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgag 3025651  T
Q  314 gagtgtttgtgcttc 328  Q
    ||||||  |||||||    
T  3025652 gagtgtccgtgcttc 3025666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 31236628 - 31236580
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtg 269  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  31236628 taataatttgagaaaatcaca--taattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 12606880 - 12606830
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||||||    
T  12606880 taataatttgagaaaatcata--taattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 11927140 - 11927087
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  11927140 tgttaataatttgataaaatcaca--taattcagtgtaattatatgtgtcggtgtc 11927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 33405438 - 33405385
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||  |||||||||| | ||||||||||||||||||||||    
T  33405438 tgttaataatttgagaaaa--acacataatttagtgtaattatatgtgtcggtgtc 33405385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 4786390 - 4786334
Alignment:
Q  218 ttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgata 276  Q
    |||||||||| |||||||||||  ||||||| |||||||||||||||||||||| ||||    
T  4786390 ttaataatttaagaaaatcaca--taattcagtgtaattatatgtgtcggtgtcggata 4786334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 12985400 - 12985450
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  |||||||||||||| |||| ||||||||||    
T  12985400 taataatttgagaaaatcaca--taattcaatgtaatcatatatgtcggtgtc 12985450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 13844647 - 13844597
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| | ||||||||||||||||||||||    
T  13844647 taataatttgagaaaatcaca--taattgagtgtaattatatgtgtcggtgtc 13844597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 14134707 - 14134757
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  14134707 taataatttgagaaaatcaca--taattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 34897093 - 34897143
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||| ||||    
T  34897093 taataatttgagaaaatcaca--taattcagtgtaattatatgtgtcgatgtc 34897143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 11944670 - 11944723
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||| |||||||||  ||| ||| ||||||||||||||||||||||    
T  11944670 tgttaataatttgataaaatcaca--taactcagtgtaattatatgtgtcggtgtc 11944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 18964202 - 18964234
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||||||||||||||||||||||||||||||    
T  18964202 cacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 11803264 - 11803316
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||||||||| |||||||||||  ||||||| ||||||||||||||| |||||    
T  11803264 tgttaataatttaagaaaatcaca--taattcagtgtaattatatgtgttggtgt 11803316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 8798885 - 8798838
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtc 265  Q
    |||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  8798885 tgttaataatttgagaaaataaca--taattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 8847281 - 8847314
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||||||||||||||||||    
T  8847281 cacataattcagtgtaattatatgtgtcggtgtc 8847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 20679446 - 20679396
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  || |||| |||||||||| |||||||||||    
T  20679446 taataatttgagaaaatcaca--tagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 26902209 - 26902176
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||||||||||||||||||    
T  26902209 cacataattcagtgtaattatatgtgtcggtgtc 26902176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 27213555 - 27213601
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcgg 267  Q
    ||||||||| |||||||||||  ||||||| ||||||||||||||||||    
T  27213555 taataatttcagaaaatcaca--taattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 29447161 - 29447111
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||||||||| || | |||||||||||    
T  29447161 taataatttgagaaaatcaca--taattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 7658471 - 7658520
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||||||||| |||  ||||||| ||||||||||| |||||||||    
T  7658471 taataatttgagaaaattaca--taattcagtgtaattatatttgtcggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 34201097 - 34201056
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgt 262  Q
    ||||||||||||||||| |||  |||||||||||||||||||||    
T  34201097 taataatttgagaaaatgaca--taattcaatgtaattatatgt 34201056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 238 - 328
Target Start/End: Complemental strand, 20242761 - 20242671
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtgtttgtgcttc 328  Q
    ||||||||||| |||||||||||||||||||||| || | ||||| | ||||||||   || ||| || ||||||||||||| ||||||||    
T  20242761 cacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttc 20242671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 5367200 - 5367250
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||| ||||||||  ||||||| ||||||||||||||||||||||    
T  5367200 taataatttgaggaaatcaca--taattcagtgtaattatatgtgtcggtgtc 5367250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 44860328 - 44860378
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||| ||  ||||||| ||||||||||||||||||||||    
T  44860328 taataatttgagaaaatcgca--taattcagtgtaattatatgtgtcggtgtc 44860378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 18420485 - 18420436
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||||||||||||||||||  |||||||||| ||||||| ||||||||||    
T  18420485 taataatttgagaaaatcaca--taattcaatgcaattataagtgtcggtgt 18420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 44605190 - 44605141
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||||||||| |||  |||||||||||||||| ||||||||||||    
T  44605190 taataatttgagaaaataaca--taattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 23718034 - 23718082
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtg 269  Q
    ||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  23718034 taataatttgagaaagtcaca--taattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 24105706 - 24105754
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtg 269  Q
    ||||||||||||||| |||||  ||||||| ||||||||||||||||||||    
T  24105706 taataatttgagaaagtcaca--taattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 18276529 - 18276584
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgata 276  Q
    ||||||||||||||||||||   ||||||| ||||||||| |||||||||||| ||||    
T  18276529 taataatttgagaaaatcact--taattcagtgtaattatgtgtgtcggtgtcagata 18276584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 18889642 - 18889591
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtct 272  Q
    |||||| ||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  18889642 taataaattgagaaaatcaca--taattcagtgtaatcatatgtgtcggtgtct 18889591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 21616770 - 21616813
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgt 264  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||    
T  21616770 taataatttgagaaaatcaca--taattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 30471046 - 30471093
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggt 268  Q
    ||||| |||||||||||||||  |||||| ||||||||||||||||||||    
T  30471046 taatattttgagaaaatcaca--taattcgatgtaattatatgtgtcggt 30471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 35449518 - 35449565
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtc 265  Q
    ||||||||||||||||||||  |||| |||||| ||||||||||||||||    
T  35449518 tgttaataatttgagaaaat--cacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 39279681 - 39279732
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||| ||||||||||| |  ||||||| |||||||||||||||||||||    
T  39279681 gttaataatatgagaaaatcaaa--taattcagtgtaattatatgtgtcggtgt 39279732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 18570980 - 18571030
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| |||  |||||||||||||| ||||||||| |||||    
T  18570980 taataatttgagaaaatgaca--taattcaatgtaatcatatgtgtcagtgtc 18571030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 30527649 - 30527599
Alignment:
Q  216 tgttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggt 268  Q
    ||||||||||||||||||||  || |||||| | |||||||||||||||||||    
T  30527649 tgttaataatttgagaaaat--catataatttagtgtaattatatgtgtcggt 30527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 34691856 - 34691806
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||| |  ||||||| ||||||||||||||||||||||    
T  34691856 taataatttgataaaatcata--taattcagtgtaattatatgtgtcggtgtc 34691806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 34714268 - 34714218
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||| |  ||||||| ||||||||||||||||||||||    
T  34714268 taataatttgataaaatcata--taattcagtgtaattatatgtgtcggtgtc 34714218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 37411295 - 37411245
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||| ||||||||||||| ||||    
T  37411295 taataatttgagaaaatcaca--taattcagtgtgattatatgtgtcgatgtc 37411245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 45000893 - 45000847
Alignment:
Q  223 aatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||| |||||  |||||||||||| |||||||||||||||    
T  45000893 aatttgagaaaatgacaca--attcaatgtaatcatatgtgtcggtgtc 45000847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 5040740 - 5040792
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||   |||||||||||||||||||| | |||||||||||    
T  5040740 taataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 5040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 271
Target Start/End: Complemental strand, 34994015 - 34993983
Alignment:
Q  239 acataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||||||||| |||||    
T  34994015 acataattcaatgtaattatatgtgtcagtgtc 34993983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 38355933 - 38355888
Alignment:
Q  224 atttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||  ||||||| ||| ||||||||||||||||||    
T  38355933 atttgagaaaatcaca--taattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 1864933 - 1864882
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  1864933 gttaataatttgagaaaatcaca--taattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 6427358 - 6427408
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| ||||||    
T  6427358 taataatttgagaaaatcaca--taattcaatgtaattatatgtgttggtgtc 6427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 36878469 - 36878522
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctga 274  Q
    |||||||||||||||||||||  ||||||| |||||||||| ||||||||||||||    
T  36878469 taataatttgagaaaatcaca--taattcagtgtaattataggtgtcggtgtctga 36878522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 44482240 - 44482288
Alignment:
Q  221 ataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  44482240 ataatttgagaaaatcaca--taattcagtgtaattatatgtgtcggtgtc 44482288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 7918262 - 7918212
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||| |||||    
T  7918262 taataatttgagaaaatcaca--taattcagtgtaattatatgtgtcagtgtc 7918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 9709828 - 9709878
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||||||||    
T  9709828 taataatttgagaaaatcaca--taattcgttgtaattatatgtgtcggtgtc 9709878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 40181879 - 40181929
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||| ||||||||||||| ||||||||    
T  40181879 taataatttgagaaaatcaca--taattcagtgtaattatatgtatcggtgtc 40181929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 25361896 - 25361944
Alignment:
Q  221 ataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||  ||||||| |||||||||||||||| |||||    
T  25361896 ataatttgagaaaatcaca--taattcagtgtaattatatgtgtcagtgtc 25361944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 17425144 - 17425101
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgt 264  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||    
T  17425144 taataatttgataaaatcaca--taattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 328
Target Start/End: Complemental strand, 22515938 - 22515831
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtctgatataacacttatctgacactgagatacgtctaatccgaagagtg 318  Q
    ||||||||||| |||||||||  ||||| | |||||||| | ||||||||||| || |  |||| |||| ||||| |||| ||| ||||||||| |||||    
T  22515938 taataatttgaaaaaatcaca--taatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtg 22515841  T
Q  319 tttgtgcttc 328  Q
    |  |||||||    
T  22515840 tccgtgcttc 22515831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 34371728 - 34371771
Alignment:
Q  226 ttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||    
T  34371728 ttgagaaaatcaca--taattcagtgtaattatatgtgtcggtgtc 34371771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 1486760 - 1486710
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| |||||||||  ||||||| |||||||||| |||||||||||    
T  1486760 taataatttgaaaaaatcaca--taattcagtgtaattataagtgtcggtgtc 1486710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 9828052 - 9828102
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| |||||||||  ||||||| ||||||| ||||||||||||||    
T  9828052 taataatttgataaaatcaca--taattcagtgtaattttatgtgtcggtgtc 9828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 14332693 - 14332643
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||| | ||||||||||||| ||||||||    
T  14332693 taataatttgagaaaatcaca--taatttagtgtaattatatgtctcggtgtc 14332643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 20157401 - 20157351
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||| |||||||||||||  ||||||| |||||| |||||||||||||||    
T  20157401 taataatgtgagaaaatcaca--taattcagtgtaatcatatgtgtcggtgtc 20157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 29163415 - 29163382
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||| ||||||||||||||||||||    
T  29163415 cacataattcaatttaattatatgtgtcggtgtc 29163382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 30749865 - 30749898
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||||||||||||||||||    
T  30749865 cacataattcagtgtaattatatgtgtcggtgtc 30749898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Original strand, 30771316 - 30771349
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||||||||||||||||||||    
T  30771316 cacataattcagtgtaattatatgtgtcggtgtc 30771349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 38078712 - 38078662
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| |||||||||  |||||||||||||||| | |||||||||||    
T  38078712 taataatttgaaaaaatcaca--taattcaatgtaattacaagtgtcggtgtc 38078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 38503328 - 38503378
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||| | ||  |||| ||||||||||||||||||||||    
T  38503328 taataatttgagaaaatcatatat--ttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 5944289 - 5944341
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||| ||||   ||||||||||| |||||||||| |||||||||||    
T  5944289 taataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtc 5944341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 10233261 - 10233310
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||| ||||||||||||||  ||||||| |||||||||||||||| ||||    
T  10233261 taataaattgagaaaatcaca--taattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 10572640 - 10572591
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    |||||||||||||||||||||  ||||||  |||||||| ||||||||||||    
T  10572640 taataatttgagaaaatcaca--taattcggtgtaattaaatgtgtcggtgt 10572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 270
Target Start/End: Original strand, 13997908 - 13997940
Alignment:
Q  238 cacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||| |||||||||||||||||||||    
T  13997908 cacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 25098604 - 25098563
Alignment:
Q  221 ataatttgagaaaatcacacataattcaatgtaattatatgtgt 264  Q
    |||||||||||||||||||  ||||||| |||||||||||||||    
T  25098604 ataatttgagaaaatcaca--taattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 28856 - 28907
Alignment:
Q  217 gttaataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgt 270  Q
    ||||||||||| |||||||| ||  |||||||||||||||||||||||||||||    
T  28856 gttaataatttaagaaaatcgca--taattcaatgtaattatatgtgtcggtgt 28907  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 9798 - 9748
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||   ||||||| ||||||||||||||||||||||    
T  9798 taataatttgagaaaatcact--taattcagtgtaattatatgtgtcggtgtc 9748  T

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Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 135363 - 135313
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    |||||||||||||||||||||  ||||||  ||||||||||||||||||||||    
T  135363 taataatttgagaaaatcaca--taattctgtgtaattatatgtgtcggtgtc 135313  T

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Target: scaffold0376 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 271
Target Start/End: Original strand, 6339 - 6370
Alignment:
Q  240 cataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||||||||||||||||||    
T  6339 cataattcaatgtaattatatgtgtcggtgtc 6370  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 44572 - 44529
Alignment:
Q  223 aatttgagaaaatcacacataattcaatgtaattatatgtgtcggt 268  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||    
T  44572 aatttgagaaaatcaca--taattcagtgtaattatatgtgtcggt 44529  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 53189 - 53236
Alignment:
Q  220 aataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtg 269  Q
    ||||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  53189 aataatttgagaaaatcaca--taattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 99901 - 99951
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||| ||||||| |||  ||||||||||||||||||||||| ||||||    
T  99901 taataattttagaaaataaca--taattcaatgtaattatatgtgttggtgtc 99951  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 240072 - 240022
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcggtgtc 271  Q
    ||||||||||||||||| | |  |||||||||||||| |||||||||||||||    
T  240072 taataatttgagaaaataata--taattcaatgtaatcatatgtgtcggtgtc 240022  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 26401 - 26446
Alignment:
Q  219 taataatttgagaaaatcacacataattcaatgtaattatatgtgtcg 266  Q
    |||||||||||||||||  |||||||||||||||  ||||||||||||    
T  26401 taataatttgagaaaat--cacataattcaatgtcgttatatgtgtcg 26446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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