View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18762_low_9 (Length: 358)

Name: NF18762_low_9
Description: NF18762
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18762_low_9
NF18762_low_9
[»] chr1 (20 HSPs)
chr1 (31-266)||(26327776-26328009)
chr1 (184-279)||(2864110-2864204)
chr1 (184-252)||(8365497-8365565)
chr1 (184-251)||(39914649-39914716)
chr1 (184-246)||(38748765-38748827)
chr1 (184-278)||(39150550-39150644)
chr1 (187-252)||(8372989-8373054)
chr1 (210-283)||(31807850-31807923)
chr1 (185-278)||(34232752-34232845)
chr1 (184-279)||(30822820-30822913)
chr1 (184-232)||(44329610-44329658)
chr1 (191-247)||(44829271-44829327)
chr1 (184-276)||(45640517-45640609)
chr1 (232-279)||(7750397-7750444)
chr1 (187-246)||(26604979-26605038)
chr1 (184-234)||(8794428-8794478)
chr1 (184-234)||(32562397-32562447)
chr1 (192-281)||(4851297-4851385)
chr1 (184-252)||(6983034-6983102)
chr1 (196-236)||(27542870-27542910)
[»] chr2 (19 HSPs)
chr2 (184-279)||(1334928-1335023)
chr2 (184-272)||(37993052-37993140)
chr2 (184-251)||(41933126-41933193)
chr2 (210-273)||(6334742-6334805)
chr2 (184-246)||(31452390-31452452)
chr2 (184-277)||(4762318-4762411)
chr2 (184-280)||(3882582-3882678)
chr2 (184-280)||(19890233-19890329)
chr2 (184-276)||(37978466-37978556)
chr2 (186-225)||(20064932-20064971)
chr2 (184-279)||(25622501-25622595)
chr2 (184-278)||(18375030-18375124)
chr2 (187-248)||(20211522-20211583)
chr2 (209-278)||(37082269-37082338)
chr2 (182-234)||(9173749-9173801)
chr2 (184-236)||(14295638-14295690)
chr2 (187-235)||(15505555-15505603)
chr2 (182-234)||(19514883-19514935)
chr2 (184-236)||(31017352-31017404)
[»] chr3 (14 HSPs)
chr3 (179-275)||(24313522-24313618)
chr3 (186-257)||(49362400-49362471)
chr3 (184-276)||(48180215-48180307)
chr3 (182-278)||(25299079-25299175)
chr3 (184-252)||(26900067-26900137)
chr3 (104-135)||(302020-302051)
chr3 (184-279)||(48551007-48551102)
chr3 (209-275)||(51351248-51351314)
chr3 (184-225)||(22730530-22730571)
chr3 (184-225)||(26143091-26143132)
chr3 (210-283)||(29611983-29612056)
chr3 (187-252)||(39551903-39551967)
chr3 (187-252)||(42846053-42846118)
chr3 (192-236)||(45988277-45988321)
[»] chr7 (23 HSPs)
chr7 (184-278)||(27123242-27123336)
chr7 (186-252)||(39321028-39321094)
chr7 (187-279)||(25886137-25886229)
chr7 (189-251)||(32699801-32699862)
chr7 (186-251)||(44592861-44592926)
chr7 (184-244)||(3692879-3692939)
chr7 (184-252)||(35731281-35731349)
chr7 (184-251)||(33887896-33887963)
chr7 (184-279)||(35496617-35496712)
chr7 (184-278)||(28770445-28770539)
chr7 (184-274)||(46726109-46726198)
chr7 (189-278)||(27870396-27870483)
chr7 (184-225)||(28663183-28663224)
chr7 (184-273)||(33922784-33922872)
chr7 (184-236)||(22618741-22618793)
chr7 (192-256)||(26197528-26197592)
chr7 (187-235)||(27337708-27337756)
chr7 (184-251)||(37158400-37158467)
chr7 (186-280)||(29711539-29711633)
chr7 (182-275)||(18801012-18801104)
chr7 (187-276)||(31902796-31902884)
chr7 (198-234)||(18219143-18219179)
chr7 (187-251)||(40753994-40754057)
[»] chr5 (15 HSPs)
chr5 (187-281)||(7719169-7719263)
chr5 (184-278)||(8208147-8208241)
chr5 (187-234)||(3140826-3140873)
chr5 (186-276)||(15720037-15720127)
chr5 (187-277)||(30501187-30501277)
chr5 (187-277)||(30541530-30541620)
chr5 (184-268)||(2827608-2827692)
chr5 (184-280)||(9276624-9276719)
chr5 (192-279)||(34032142-34032229)
chr5 (184-242)||(8221126-8221184)
chr5 (181-247)||(17692261-17692327)
chr5 (187-252)||(16667339-16667404)
chr5 (232-280)||(27650900-27650948)
chr5 (219-279)||(35819297-35819357)
chr5 (184-228)||(42265454-42265498)
[»] chr8 (25 HSPs)
chr8 (184-288)||(27801270-27801374)
chr8 (186-278)||(33013014-33013105)
chr8 (184-279)||(28207591-28207686)
chr8 (184-278)||(39691158-39691252)
chr8 (184-281)||(42636410-42636507)
chr8 (184-235)||(167888-167939)
chr8 (192-251)||(12684546-12684605)
chr8 (187-278)||(16723242-16723333)
chr8 (209-276)||(25382592-25382659)
chr8 (186-278)||(2258137-2258229)
chr8 (198-246)||(9735362-9735410)
chr8 (184-252)||(13028123-13028191)
chr8 (186-225)||(1135182-1135221)
chr8 (186-236)||(2250364-2250414)
chr8 (184-234)||(4384179-4384229)
chr8 (210-276)||(12002237-12002303)
chr8 (187-253)||(15352117-15352183)
chr8 (184-225)||(5588981-5589022)
chr8 (191-236)||(9024498-9024543)
chr8 (182-235)||(17081413-17081466)
chr8 (186-273)||(884389-884477)
chr8 (184-279)||(10335066-10335162)
chr8 (184-236)||(10893475-10893527)
chr8 (187-279)||(20279602-20279694)
chr8 (187-279)||(21066229-21066321)
[»] chr4 (27 HSPs)
chr4 (184-240)||(31429283-31429339)
chr4 (184-279)||(8297838-8297933)
chr4 (184-281)||(7444429-7444527)
chr4 (192-273)||(50341919-50341998)
chr4 (182-251)||(11260552-11260621)
chr4 (184-281)||(51834879-51834976)
chr4 (187-279)||(20394605-20394697)
chr4 (192-280)||(41462015-41462103)
chr4 (209-275)||(48097923-48097989)
chr4 (181-255)||(49084442-49084516)
chr4 (186-279)||(49400580-49400672)
chr4 (184-276)||(7852588-7852680)
chr4 (184-276)||(27953085-27953176)
chr4 (187-239)||(51736361-51736413)
chr4 (185-287)||(14603788-14603890)
chr4 (184-246)||(48337556-48337618)
chr4 (209-278)||(24981760-24981829)
chr4 (184-278)||(45900193-45900287)
chr4 (184-246)||(50086452-50086514)
chr4 (213-255)||(52101378-52101420)
chr4 (184-289)||(24175443-24175547)
chr4 (186-243)||(37440829-37440886)
chr4 (184-285)||(41370212-41370313)
chr4 (182-235)||(50427000-50427053)
chr4 (187-276)||(53014253-53014341)
chr4 (190-234)||(23504753-23504797)
chr4 (184-280)||(49532295-49532390)
[»] chr6 (15 HSPs)
chr6 (187-251)||(11720925-11720989)
chr6 (184-276)||(17215727-17215819)
chr6 (209-288)||(2086766-2086845)
chr6 (184-234)||(1840995-1841045)
chr6 (192-281)||(19293505-19293594)
chr6 (184-279)||(5446706-5446801)
chr6 (184-251)||(25028742-25028809)
chr6 (189-232)||(26669328-26669371)
chr6 (184-250)||(1371208-1371274)
chr6 (184-250)||(1378956-1379022)
chr6 (184-278)||(30509284-30509378)
chr6 (192-252)||(3766271-3766331)
chr6 (184-240)||(7421678-7421734)
chr6 (186-234)||(23399122-23399170)
chr6 (105-133)||(23399222-23399250)
[»] scaffold0204 (1 HSPs)
scaffold0204 (184-246)||(25078-25140)
[»] scaffold0119 (1 HSPs)
scaffold0119 (189-232)||(1422-1465)
[»] scaffold0005 (1 HSPs)
scaffold0005 (185-287)||(213488-213590)
[»] scaffold0036 (1 HSPs)
scaffold0036 (184-278)||(62569-62663)
[»] scaffold1444 (1 HSPs)
scaffold1444 (186-279)||(978-1071)


Alignment Details
Target: chr1 (Bit Score: 175; Significance: 4e-94; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 31 - 266
Target Start/End: Complemental strand, 26328009 - 26327776
Alignment:
Q  31 aaataaaaatatatctatttcatttaccattgaaaaacaaaatttattttctatgttttatgatatcaataagggaaatgttaacgagtgtctccgaaac 130  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  26328009 aaataaaaatatatctatttcatttaccattggaaaacaaaatttattttctatgttttatgatatcaataagggaaatgttaacaagtgtcttcgaaac 26327910  T
Q  131 actttgagcgtaaattgtaagnnnnnnnnataaaatttcgtttatatttaaattgcattgaaaattgtaatagttgagttttttaaagaataatttttaa 230  Q
    ||||||||||||||| |||||        |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26327909 actttgagcgtaaatcgtaag--ttttttataaaatttcgtgtatatttaaattgcattgaaaattgtaatagtttagttttttaaagaataatttttaa 26327812  T
Q  231 atttggaatgtttaaaaagtgctccgaggatactcg 266  Q
    ||||| ||||||||||| ||||||||||||||||||    
T  26327811 atttgaaatgtttaaaacgtgctccgaggatactcg 26327776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 2864204 - 2864110
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||| |||||||||||||||| ||||| |||||||||||  ||||| ||| ||||||||| ||||  ||| ||| ||||||||||||||||||    
T  2864204 tgcattggaaattgtaatagttgacttttt-aaagaataattcctaaatatgggatgtttaaagagtgtcccggggacactcgttaacaagaccct 2864110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 8365565 - 8365497
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    ||||||||| |||||||||||||| ||||| ||||||||||| |||||||| | ||||||||| |||||    
T  8365565 tgcattgaagattgtaatagttgattttttaaaagaataattattaaatttaggatgtttaaagagtgc 8365497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 39914649 - 39914716
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||||||||||||||| ||||| |||||| |||| |||||||||| ||| ||||| ||||    
T  39914649 tgcattgaaaattgtaatagttgactttttaaaagaacaattgttaaatttggtatgcttaaagagtg 39914716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 38748765 - 38748827
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaa 246  Q
    ||||||||||||| |||||||||| ||||| |||||||||||| ||||||||| ||| |||||    
T  38748765 tgcattgaaaattataatagttgactttttaaaagaataatttctaaatttggtatgcttaaa 38748827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 39150644 - 39150550
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||||| |||||||||||||||| |||||  ||||||||||  ||||||| | ||| ||||| ||||| ||| ||  |||||||||||||||||    
T  39150644 tgcattgtaaattgtaatagttgactttttacaagaataattactaaatttaggatgcttaaagagtgccccgggggcactcgttaacaagaccc 39150550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 8373054 - 8372989
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    |||||| |||||||||||||| ||||| ||||||||||| |||||||| | ||||||||| |||||    
T  8373054 attgaagattgtaatagttgattttttaaaagaataattattaaatttaggatgtttaaagagtgc 8372989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 31807850 - 31807923
Alignment:
Q  210 tttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctatta 283  Q
    ||||||||||||||||  | | ||| ||||| ||||| ||||||||| ||  ||||||||||||||||||||||    
T  31807850 tttttaaagaataattacttattttagaatgcttaaatagtgctccgggggcactcgttaacaagaccctatta 31807923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 34232752 - 34232845
Alignment:
Q  185 gcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||||||||||||||||||||| ||||| |||||||||||  ||||||  | ||| ||||| ||||  ||| |   |||||||||||||||||    
T  34232752 gcattgaaaattgtaatagttgactttttaaaagaataattgctaaattaaggatgcttaaagagtgtcccgtgagcactcgttaacaagaccc 34232845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 30822820 - 30822913
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||| |||||||||||||| || | ||||| | |||||||||  |||||||| |||  ||||||||||  ||  ||||||||||||||||||||||    
T  30822820 tgcaatgaaaattgtaataattaactttttaagagaataattactaaatttgaaatccttaaaaagtgtccc--ggatactcgttaacaagaccct 30822913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 44329658 - 44329610
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaat 232  Q
    ||||||||||||| |||||||||| ||||| ||||||||||| ||||||    
T  44329658 tgcattgaaaattataatagttgactttttaaaagaataattattaaat 44329610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 44829327 - 44829271
Alignment:
Q  191 aaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaa 247  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||| ||| ||||||    
T  44829327 aaaattgtaatagttgacctttttaaagaataattactaaatttgggatgcttaaaa 44829271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 45640609 - 45640517
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    ||||||||||||| ||||| |||| ||||| |||||||| || |||||||||| ||| || |||||||  |||  || |||||||||| ||||    
T  45640609 tgcattgaaaattataataattgactttttgaaagaatagttcttaaatttgggatgctttaaaagtgtcccggagacactcgttaacgagac 45640517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 7750444 - 7750397
Alignment:
Q  232 tttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||| |||||||||| |||||  |||||||||||||||||||||||||    
T  7750444 tttgtaatgtttaaagagtgccacgaggatactcgttaacaagaccct 7750397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 26604979 - 26605038
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaa 246  Q
    ||||||| |||||||| || | ||||| ||||||||||||||||||||| ||| ||||||    
T  26604979 attgaaatttgtaataatttactttttaaaagaataatttttaaatttgaaatttttaaa 26605038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 8794478 - 8794428
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    ||||||||||||| |||||||||| ||||| |||||||||||  |||||||    
T  8794478 tgcattgaaaattataatagttgactttttaaaagaataattactaaattt 8794428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 32562397 - 32562447
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    |||||||||||||||||||||||| ||||| ||| |||||||  |||||||    
T  32562397 tgcattgaaaattgtaatagttgaatttttaaaataataattactaaattt 32562447  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 4851297 - 4851385
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctat 281  Q
    |||||||||||||||| |||| |||||||||||||||||| |||  ||| ||||| ||||  |||  |  ||||||||||||||| ||||    
T  4851297 aaattgtaatagttgactttt-taaagaataatttttaaaattgacatgcttaaagagtgtcccggaggcactcgttaacaagactctat 4851385  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 6983034 - 6983102
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    |||||||||||||| |||| |||| | |||||| ||||||||| | ||||||||||  ||||| |||||    
T  6983034 tgcattgaaaattgaaatatttgactcttttaatgaataatttcttaatttggaatacttaaagagtgc 6983102  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 27542910 - 27542870
Alignment:
Q  196 tgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    ||||||| |||| |||||||||||||| |||||||||||||    
T  27542910 tgtaatatttgacttttttaaagaatattttttaaatttgg 27542870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 1334928 - 1335023
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||| ||||| |||  |||||||||||||||||||||    
T  1334928 tgcattggaaattgtaatagttgatttttttaaagaataattattaaatttgggatgcttaaagagtgccccggagatactcgttaacaagaccct 1335023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 272
Target Start/End: Complemental strand, 37993140 - 37993052
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaaca 272  Q
    |||||||||||||||||||||||| ||||| |||||||| || |||||||| ||||||||||| | ||  |||| || |||||||||||    
T  37993140 tgcattgaaaattgtaatagttgattttttgaaagaatagttattaaatttagaatgtttaaagaatgtcccgaagacactcgttaaca 37993052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 41933193 - 41933126
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||||||||||||||| ||||| |||||||||||  ||||||||  ||||||||| ||||    
T  41933193 tgcattgaaaattgtaatagttgactttttaaaagaataattgctaaatttgatatgtttaaacagtg 41933126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 6334742 - 6334805
Alignment:
Q  210 tttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaa 273  Q
    |||||||| |||||||||| ||||| | ||||||||| |||| |||||||| ||||||||||||    
T  6334742 tttttaaaaaataattttttaatttagcatgtttaaagagtgttccgaggacactcgttaacaa 6334805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 31452390 - 31452452
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaa 246  Q
    |||||||||||||||||| ||||| ||||| |||||||||||  |||| |||| |||||||||    
T  31452390 tgcattgaaaattgtaattgttgactttttaaaagaataattactaaacttgggatgtttaaa 31452452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 4762411 - 4762318
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacc 277  Q
    ||||||||||||| |||||||||| ||| | ||| |||||||  ||||||||| ||| ||||| |||| |||| |   ||||||||||||||||    
T  4762411 tgcattgaaaattataatagttgactttataaaataataattactaaatttgggatgcttaaacagtgatccgggagcactcgttaacaagacc 4762318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 3882678 - 3882582
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacccta 280  Q
    |||||||||||  | |||| ||||  ||||||||||||||||  | | ||| ||||| ||||| ||||| ||||||  |||||||||||||||||||    
T  3882678 tgcattgaaaaccgaaatatttgacctttttaaagaataattgcttattttagaatgcttaaagagtgccccgagggcactcgttaacaagacccta 3882582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 19890233 - 19890329
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacccta 280  Q
    ||||||| |||||||||||||||| ||||| |||||||||||  ||||||| | ||| ||||| ||| | |||   | |||||||||||| ||||||    
T  19890233 tgcattggaaattgtaatagttgactttttaaaagaataattactaaatttaggatgcttaaatagtaccccggaaacactcgttaacaaaacccta 19890329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Complemental strand, 37978556 - 37978466
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    |||||| ||| |||||||| |||| |||||||||||||| ||| ||||||||| || ||| ||||||| | | |||| |||||||||||||||    
T  37978556 tgcattaaaatttgtaatatttgacttttttaaagaatattttctaaatttgggatcttt-aaaagtgttac-aggacactcgttaacaagac 37978466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 20064971 - 20064932
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatt 225  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  20064971 cattgaaaattgtaatagttgactttttaaaagaataatt 20064932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 25622595 - 25622501
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||||||||||||||| ||||  |||||||| |||||||  | ||||| ||||||||||| |||||  || |   ||||||||||||||||||    
T  25622595 tgcattgaaaattgtaatatttgatatttttaaa-aataattacttaatttagaatgtttaaagagtgcatcgggagcactcgttaacaagaccct 25622501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 18375124 - 18375030
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||||||||||||| | |  |||| |||||||||||||||||| |  ||| |||||  ||||| ||| | |  ||||||||||||||||||||||    
T  18375124 tgcattgaaaattggagtttttgacttttttaaagaataatttctttattaggaatccttaaagagtacccttaggatactcgttaacaagaccc 18375030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 20211522 - 20211583
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaa 248  Q
    ||||||| |||||| | |||| || ||||||||||| ||||||||||||||||  |||||||    
T  20211522 attgaaatttgtaacatttgatttatttaaagaatattttttaaatttggaattcttaaaaa 20211583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 37082269 - 37082338
Alignment:
Q  209 ttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||||||||||||||||| |  ||  |||||| ||||||||||  |||| || |||||||||||||||||    
T  37082269 ttttttaaagaataatttcttcataaggaatgcttaaaaagtgacccgaagacactcgttaacaagaccc 37082338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 9173749 - 9173801
Alignment:
Q  182 attgcattgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    |||| ||||||||||||||||||||| ||||| ||| |||||||  |||||||    
T  9173749 attgtattgaaaattgtaatagttgattttttaaaaaaataattgctaaattt 9173801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 14295690 - 14295638
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    |||||||||||||||||||||| |  |||| |||||||||||  |||||||||    
T  14295690 tgcattgaaaattgtaatagttaaccttttaaaagaataattactaaatttgg 14295638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 15505603 - 15505555
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttg 235  Q
    |||||||||| |||||||| | ||||| ||||||||||| |||||||||    
T  15505603 attgaaaattataatagtttactttttgaaagaataattattaaatttg 15505555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 19514935 - 19514883
Alignment:
Q  182 attgcattgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    |||||||||| |||| |||||||||| ||||  ||||||||||| ||||||||    
T  19514935 attgcattgataattataatagttgacttttaaaaagaataattgttaaattt 19514883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 31017352 - 31017404
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    |||||||||||||  |||| |||| |||||||||||||||||  |||||||||    
T  31017352 tgcattgaaaattaaaatatttgacttttttaaagaataattactaaatttgg 31017404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 24313618 - 24313522
Alignment:
Q  179 taaattgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaaga 275  Q
    |||| |||||||||||||| ||   ||||  |||||||||||||||| || ||||| ||||||||||| ||||| ||||||| ||||||||||||||    
T  24313618 taaaatgcattgaaaattgaaaactttgacatttttaaagaataattgtttaatttagaatgtttaaagagtgccccgaggacactcgttaacaaga 24313522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 49362400 - 49362471
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccga 257  Q
    ||||| |||||||||||||| | ||||| ||||||||||| |||||||||| ||||||||||||||| ||||    
T  49362400 cattggaaattgtaatagttaactttttaaaagaataattattaaatttgggatgtttaaaaagtgcaccga 49362471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 48180215 - 48180307
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    ||||||| |||||||||||||||| ||||| ||||||||||| ||||||| || ||| ||||| ||||  |||  || |||||||||||||||    
T  48180215 tgcattggaaattgtaatagttgactttttaaaagaataattgttaaattggggatgcttaaagagtgtcccggagacactcgttaacaagac 48180307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 25299079 - 25299175
Alignment:
Q  182 attgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||||||||||||||| |||  ||   |||||||||||||||||| |  ||| | |||| |||||||||||| || ||| |||||||||||||||||    
T  25299079 attgcattgaaaattgaaatctttactttttttaaagaataatttctttattagaaatgcttaaaaagtgcttcggggacactcgttaacaagaccc 25299175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 26900067 - 26900137
Alignment:
Q  184 tgcattgaaaattgtaatagttgagtttttt-aaagaataattttt-aaatttggaatgtttaaaaagtgc 252  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||| ||| ||||| |||||    
T  26900067 tgcattgaaaattgtaatagttgacttttttaaaagaataatttttcacatttgggatgcttaaagagtgc 26900137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 104 - 135
Target Start/End: Original strand, 302020 - 302051
Alignment:
Q  104 ggaaatgttaacgagtgtctccgaaacacttt 135  Q
    ||||||||||||||||||||||||||||||||    
T  302020 ggaaatgttaacgagtgtctccgaaacacttt 302051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 48551102 - 48551007
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||||||||||||| ||   ||||  ||||||||||||||||| | ||||| | ||| ||||| ||||||| | ||| |||||||||||| |||||    
T  48551102 tgcattgaaaattgaaaactttgacatttttaaagaataatttcttaatttagcatgcttaaagagtgctctggggacactcgttaacaacaccct 48551007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 51351314 - 51351248
Alignment:
Q  209 ttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaaga 275  Q
    ||||| ||||||||||| |||||||| ||||| |||||||||  ||||  || ||||||||||||||    
T  51351314 tttttaaaagaataattattaaatttagaatgcttaaaaagtattccgcagacactcgttaacaaga 51351248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 22730530 - 22730571
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatt 225  Q
    ||||||||||||| |||||||||| ||||| |||||||||||    
T  22730530 tgcattgaaaattataatagttgactttttaaaagaataatt 22730571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 26143132 - 26143091
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatt 225  Q
    |||||| ||||||||||||||||| ||||| |||||||||||    
T  26143132 tgcattcaaaattgtaatagttgactttttaaaagaataatt 26143091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 283
Target Start/End: Complemental strand, 29612056 - 29611983
Alignment:
Q  210 tttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctatta 283  Q
    ||||||||||||||||  | | ||| ||||||||||| ||||  ||| ||  ||||||||||||||||||||||    
T  29612056 tttttaaagaataattacttattttagaatgtttaaagagtgtcccgggggcactcgttaacaagaccctatta 29611983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 39551903 - 39551967
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    ||||||||||||| ||||||| ||||| |||||||||||  ||||||||| ||| ||||| |||||    
T  39551903 attgaaaattgta-tagttgattttttaaaagaataattgctaaatttggtatgcttaaatagtgc 39551967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 42846053 - 42846118
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    ||||||||||| ||||||||| ||||| |||||||||||  ||||||| | ||| ||||| |||||    
T  42846053 attgaaaattgaaatagttgactttttcaaagaataattactaaatttaggatgcttaaagagtgc 42846118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 45988277 - 45988321
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    |||||||||||||||| ||||| ||||||||||| | ||||||||    
T  45988277 aaattgtaatagttgattttttaaaagaataattgtcaaatttgg 45988321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 27123336 - 27123242
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||  ||||||||| ||| ||||| ||||| ||| ||  |||||||||||||||||    
T  27123336 tgcattggaaattgtaatagttgactttttaaaagaatgattactaaatttgggatgcttaaagagtgccccgggggcactcgttaacaagaccc 27123242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 39321028 - 39321094
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    |||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||| ||||| |||||    
T  39321028 cattgaaaattgtaatagttgactttttaaaagaataattgttaaatttggtatgcttaaagagtgc 39321094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 25886229 - 25886137
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||||||||||||||||| ||| | | |||||||||| |||||||  |||||||||| ||| | ||||||| ||| |||||||| |||||    
T  25886229 attgaaaattgtaatagttgactttctaagagaataatttctaaatttaaaatgtttaaagagtaccccgaggacactagttaacaaaaccct 25886137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 251
Target Start/End: Original strand, 32699801 - 32699862
Alignment:
Q  189 tgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||| ||||    
T  32699801 tgaaaattgtaatagttga-ttttttaaaaaataatttttaaatttgggatgattaaagagtg 32699862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 44592926 - 44592861
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||||||||||| | ||||| ||||||||||| |||||||| |||| |||||| ||||    
T  44592926 cattgaaaattgtaatagttaactttttaaaagaataattattaaattttgaatatttaaagagtg 44592861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 244
Target Start/End: Complemental strand, 3692939 - 3692879
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgttta 244  Q
    ||||||| |||||||||||||||| ||||| |||||||||||  ||||||||| |||||||    
T  3692939 tgcattggaaattgtaatagttgattttttaaaagaataattgctaaatttggtatgttta 3692879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 35731349 - 35731281
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    ||||||| |||||||||||||||| ||||| |||||||| || |||||||||| ||| ||||| |||||    
T  35731349 tgcattggaaattgtaatagttgactttttaaaagaatagttgttaaatttggtatgcttaaagagtgc 35731281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 33887896 - 33887963
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||||| |||| |||| ||||||||||||||||| || | ||||||||| ||||| ||||    
T  33887896 tgcattgaaaattgaaatatttgacttttttaaagaataattatttattttggaatgcttaaagagtg 33887963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 35496617 - 35496712
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||||||||||||||||||||||| ||||| |||  ||| ||  ||||||| | ||| ||||| ||||||||| ||| | |||| |||||||||||    
T  35496617 tgcattgaaaattgtaatagttgactttttaaaaatatagttactaaattttggatgcttaaagagtgctccggggacattcgtaaacaagaccct 35496712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 28770539 - 28770445
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||||| |||||||||||||||| ||||  |||||||||||  ||| ||||| ||| ||||| ||||| |||  |  |||||||||||||||||    
T  28770539 tgcattggaaattgtaatagttgacttttcaaaagaataattactaattttgggatgcttaaagagtgccccggaggcactcgttaacaagaccc 28770445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 46726198 - 46726109
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaag 274  Q
    |||||||||| |||||| | |||| |||||||||||||| ||||||||||||| ||  ||||| ||||| ||| ||  |||||||||||||    
T  46726198 tgcattgaaatttgtaacatttgacttttttaaagaatattttttaaatttggtatccttaaagagtgc-ccgggggcactcgttaacaag 46726109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 27870483 - 27870396
Alignment:
Q  189 tgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||||||||||||||||| ||||  |||||||||||  ||||| |||| |||||||| ||||||||| |   |||||||||||||||||    
T  27870483 tgaaaattgtaatagttgactttta-aaagaataattactaaatatgga-tgtttaaagagtgctccgggagcactcgttaacaagaccc 27870396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 28663183 - 28663224
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatt 225  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  28663183 tgcattgaaaattgtaatagttgactttttaaaagaataatt 28663224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 33922784 - 33922872
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaa 273  Q
    |||||||||||||| | || |||| |||||||||||||||||||  ||||| ||||| ||||||| ||| ||| ||  ||||||||||||    
T  33922784 tgcattgaaaattgaactatttgacttttttaaagaataattttctaatttagaatgcttaaaaa-tgccccgtgggcactcgttaacaa 33922872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 22618741 - 22618793
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    ||||||||||||||||||||||||  |||| ||  ||||||||||||||||||    
T  22618741 tgcattgaaaattgtaatagttgacattttgaagaaataatttttaaatttgg 22618793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 26197592 - 26197528
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccg 256  Q
    |||||||||||||||| ||||| || ||||| ||||||||||||  ||||||||| |||| ||||    
T  26197592 aaattgtaatagttgaatttttaaaggaatagtttttaaatttgagatgtttaaagagtgttccg 26197528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 27337756 - 27337708
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttg 235  Q
    |||| ||| |||||||||||| ||||||||||||||||| |||||||||    
T  27337756 attgtaaactgtaatagttgatttttttaaagaataattgttaaatttg 27337708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 37158400 - 37158467
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||||||||||||||| ||||| ||| |||||||  ||||||| | ||  ||||||||||    
T  37158400 tgcattgaaaattgtaatagttgactttttaaaataataattactaaattttggattcttaaaaagtg 37158467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 29711539 - 29711633
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacccta 280  Q
    ||||||||||| |||| ||||| ||||| |||||| ||||| |||||||   ||||||||| | ||||  || || || ||||||||||||||||    
T  29711539 cattgaaaattataattgttgattttttaaaagaaaaatttctaaatttaagatgtttaaagaatgctttgaagacacacgttaacaagacccta 29711633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 275
Target Start/End: Complemental strand, 18801104 - 18801012
Alignment:
Q  182 attgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaaga 275  Q
    |||| ||||||||||||||||||||| ||||  ||||| |||||  ||||||| ||||  ||||| ||| ||||||||  |||| |||||||||    
T  18801104 attgtattgaaaattgtaatagttgacttttgaaaagagtaattgctaaattt-gaatccttaaagagttctccgagggcactcattaacaaga 18801012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 31902796 - 31902884
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    ||||||||||| |||| |||| ||| |||| ||||||||| | | |||| | || ||||||||||| ||| ||| |||||||||||||||    
T  31902796 attgaaaattgaaatatttgactttcttaaggaataatttcttattttgaattgcttaaaaagtgccccg-ggacactcgttaacaagac 31902884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 18219143 - 18219179
Alignment:
Q  198 taatagttgagttttttaaagaataatttttaaattt 234  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  18219143 taatatttgagttttttaaagaataatttctaaattt 18219179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 40753994 - 40754057
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    ||||||||| ||||||||||| ||||||||| ||||||| ||||||||   ||||||||| ||||    
T  40753994 attgaaaat-gtaatagttgatttttttaaaaaataattattaaatttatgatgtttaaagagtg 40754057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 281
Target Start/End: Complemental strand, 7719263 - 7719169
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctat 281  Q
    |||| |||||||||||||||| ||||| |||||||||||||||||| ||| ||| ||||| ||||  ||| ||  ||||||||| ||||||||||    
T  7719263 attggaaattgtaatagttgattttttaaaagaataatttttaaatatggtatgcttaaagagtgtcccgggggcactcgttaaaaagaccctat 7719169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 8208241 - 8208147
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||||| |||||||||||| |||| ||||| ||||||||||||| ||||||  |||| ||||| ||||||| ||  | |||||||||||||||||    
T  8208241 tgcattaaaaattgtaataattgactttttaaaagaataattttcaaatttaaaatgcttaaagagtgctctgaaaacactcgttaacaagaccc 8208147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 3140873 - 3140826
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  3140873 attgaaaattgtaatagttgactttttaaaagaataattattaaattt 3140826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 276
Target Start/End: Complemental strand, 15720127 - 15720037
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    ||||| |||||||||||||||| ||||| |||||||||||  ||||||||| ||| || || |||||| ||   | |||||||||||||||    
T  15720127 cattggaaattgtaatagttgactttttaaaagaataattgataaatttggtatgcttgaagagtgcttcggaaacactcgttaacaagac 15720037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 30501187 - 30501277
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacc 277  Q
    |||| ||||||||||| |||| ||||| |||||||||||  ||||||||| ||| ||||| ||||| | | ||  ||||||||||||||||    
T  30501187 attggaaattgtaataattgactttttaaaagaataattactaaatttgggatgcttaaagagtgccctgggggcactcgttaacaagacc 30501277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 30541530 - 30541620
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacc 277  Q
    |||| ||||||||||| |||| ||||| |||||||||||  ||||||||| ||| ||||| ||||| | | ||  ||||||||||||||||    
T  30541530 attggaaattgtaataattgactttttaaaagaataattactaaatttgggatgcttaaagagtgccctgggggcactcgttaacaagacc 30541620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 2827608 - 2827692
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgtt 268  Q
    |||||||||| |||||| | |||| ||| ||||| |||| ||| |||||||||||| |||||| ||||| ||| ||| |||||||    
T  2827608 tgcattgaaacttgtaacatttgactttcttaaataatattttctaaatttggaatctttaaagagtgccccggggacactcgtt 2827692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 9276624 - 9276719
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacccta 280  Q
    ||||||||||||| |||||||||| ||||| ||| |||||||  ||||||||| ||| || || | | | |||| || |||||||||||||||||||    
T  9276624 tgcattgaaaattataatagttgattttttaaaaaaataattactaaatttgggatgcttgaagaatac-ccgaagacactcgttaacaagacccta 9276719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 279
Target Start/End: Original strand, 34032142 - 34032229
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||||| |||| || | |||||||||||||||||  | | ||| ||||| ||||| ||||| || |||| ||||||||||||||||||    
T  34032142 aaattgaaatatttaacttttttaaagaataattacttattttagaatgcttaaagagtgccccaaggacactcgttaacaagaccct 34032229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 8221184 - 8221126
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtt 242  Q
    |||||||||| ||||||||||||| ||||| | |||||||||  ||||||| |||||||    
T  8221184 tgcattgaaagttgtaatagttgactttttaagagaataattgctaaatttagaatgtt 8221126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 17692327 - 17692261
Alignment:
Q  181 aattgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaa 247  Q
    |||||||||||||||||||| |||||| ||||| | |||||||||  ||||||| | ||| ||||||    
T  17692327 aattgcattgaaaattgtaacagttgactttttaagagaataattactaaatttaggatgcttaaaa 17692261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 16667339 - 16667404
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    |||| ||||||||||| |||| ||||| ||||||||||| |||||||||  ||| ||||| |||||    
T  16667339 attggaaattgtaataattgactttttaaaagaataattattaaatttgtgatgcttaaagagtgc 16667404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 27650900 - 27650948
Alignment:
Q  232 tttggaatgtttaaaaagtgctccgaggatactcgttaacaagacccta 280  Q
    ||||||||||||||| |||| ||||  | ||||||||||||||||||||    
T  27650900 tttggaatgtttaaagagtgttccggaggtactcgttaacaagacccta 27650948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 35819297 - 35819357
Alignment:
Q  219 aataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||||||||  ||| ||||||| ||||||||||||| || || |||| |||||||||||||    
T  35819297 aataattttataatgtggaatgcttaaaaagtgctctgaagacactcattaacaagaccct 35819357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 42265498 - 42265454
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataattttt 228  Q
    |||||||||||||| |||  |||| ||||||||||||||||||||    
T  42265498 tgcattgaaaattgaaatttttgacttttttaaagaataattttt 42265454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 288
Target Start/End: Original strand, 27801270 - 27801374
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctatta 283  Q
    |||||||||||||||||||||||| ||||| |||||||||||  ||||||| ||||| ||||| ||||    | ||  ||||||||||||||||| || |    
T  27801270 tgcattgaaaattgtaatagttgactttttaaaagaataattactaaatttagaatgattaaagagtgtcatgggggcactcgttaacaagacccaataa 27801369  T
Q  284 ataat 288  Q
    |||||    
T  27801370 ataat 27801374  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 33013105 - 33013014
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||| |||||||||||||||| ||||| ||||||||||| |||||||||| ||| ||||| ||| || |||  | |||||||||||||||||    
T  33013105 cattggaaattgtaatagttgactttttaaaagaataattgttaaatttggtatgcttaaagagtcct-cgaaaacactcgttaacaagaccc 33013014  T

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Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 28207686 - 28207591
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||| ||||| ||||   || ||  ||||||||||||||||||    
T  28207686 tgcattggaaattgtaatagttgactttttaaaagaattattgttaaatttgggatgcttaaagagtgtctcgggggcactcgttaacaagaccct 28207591  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 39691158 - 39691252
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||||||||||||| | || |||| |||||||||||||||||||| ||| ||||||| ||||| ||||   |||||  |||||||||||| ||||    
T  39691158 tgcattgaaaattgaactatttgacttttttaaagaataattttttaatgtggaatgcttaaagagtgtctcgagggcactcgttaacaaaaccc 39691252  T

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Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 42636410 - 42636507
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctat 281  Q
    ||||||| |||||||||||||||| |||||| || |||||||  ||||||||| ||| ||||| ||||| ||| |   |||| |||||||||||||||    
T  42636410 tgcattgtaaattgtaatagttgacttttttgaataataattactaaatttgggatgcttaaagagtgccccgggagcactccttaacaagaccctat 42636507  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 167888 - 167939
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttg 235  Q
    ||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  167888 tgcattggaaattataatagttgactttttaaaagaataatttttaaatttg 167939  T

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Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 12684546 - 12684605
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||||||| | ||| ||||||||||| |||||||||||||| ||||| ||||    
T  12684546 aaattgtaatagttgattctttgaaagaataattattaaatttggaatgcttaaagagtg 12684605  T

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Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 16723242 - 16723333
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||||||||||| ||||||| ||||| |||||||||||   |||||||| ||| ||||| ||||| | | ||  |||||||||||||||||    
T  16723242 attgaaaattgtattagttgattttttaaaagaataattacaaaatttgggatgcttaaagagtgccctggggtcactcgttaacaagaccc 16723333  T

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Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 25382659 - 25382592
Alignment:
Q  209 ttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    |||||||||||||||||| | ||||||||||| ||||||| |||| || ||  |||||||||||||||    
T  25382659 ttttttaaagaataatttcttaatttggaatgcttaaaaaatgcttcgggggcactcgttaacaagac 25382592  T

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Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 2258137 - 2258229
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||| |||||||||||  || | ||||| ||||||||||| |||||||||| ||| ||||| |||||  || | | |||||||||||||||||    
T  2258137 cattaaaaattgtaatgattaactttttaaaagaataattattaaatttgggatgcttaaagagtgccacgggaaaactcgttaacaagaccc 2258229  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 9735362 - 9735410
Alignment:
Q  198 taatagttgagttttttaaagaataatttttaaatttggaatgtttaaa 246  Q
    |||||||||| ||||||||| ||||||| |||||||| |||||||||||    
T  9735362 taatagttgacttttttaaaaaataattattaaatttagaatgtttaaa 9735410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 13028191 - 13028123
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    ||||||||||||||||||| | || ||||| |||||||||||  ||||||| ||||| ||||| |||||    
T  13028191 tgcattgaaaattgtaataatagattttttaaaagaataattgataaatttagaatgcttaaagagtgc 13028123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 1135221 - 1135182
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatt 225  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  1135221 cattgaaaattgtaatagttgactttttaaaagaataatt 1135182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 2250414 - 2250364
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    ||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||    
T  2250414 cattgaaaattataatggttgactttttaaaagaataattattaaatttgg 2250364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 4384179 - 4384229
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    ||||||| |||||||||||||||| ||||| |||||||||||  |||||||    
T  4384179 tgcattggaaattgtaatagttgattttttaaaagaataattactaaattt 4384229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 12002303 - 12002237
Alignment:
Q  210 tttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    ||||||||||||||||  | ||||| | ||  ||||| ||||| |||||||||||||||||||||||    
T  12002303 tttttaaagaataattacttaatttagtatacttaaagagtgccccgaggatactcgttaacaagac 12002237  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 15352117 - 15352183
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgct 253  Q
    |||| |||||| | || |||| ||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  15352117 attggaaattgaactatttgacttttttacagaataattttttaatttagaatgtttaaagagtgct 15352183  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 5589022 - 5588981
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatt 225  Q
    ||||||||||||| |||||||||| ||||| |||||||||||    
T  5589022 tgcattgaaaattataatagttgactttttaaaagaataatt 5588981  T

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Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 9024543 - 9024498
Alignment:
Q  191 aaaattgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    ||||||||||||||||| ||||| |||||||||||  |||||||||    
T  9024543 aaaattgtaatagttgattttttgaaagaataattactaaatttgg 9024498  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 17081413 - 17081466
Alignment:
Q  182 attgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttg 235  Q
    ||||||||  |||||||||||||||| ||||||||| |||||||  ||||||||    
T  17081413 attgcattagaaattgtaatagttgacttttttaaaaaataattgctaaatttg 17081466  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 884477 - 884389
Alignment:
Q  186 cattgaaaattgtaatagttgagtttttta-aagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaa 273  Q
    ||||||||||||||||| |||| ||||||| ||||||||||  |||||||   ||||||||| |||| |||   || ||||||||||||    
T  884477 cattgaaaattgtaataattgatttttttataagaataattactaaatttatgatgtttaaagagtgttccagtgacactcgttaacaa 884389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 10335066 - 10335162
Alignment:
Q  184 tgcattgaaaattgtaatagttga-gttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||||||||| ||||| ||||  ||||||| |||||||||| |   ||||||||  ||||| ||||||||||    ||||||||||||||||||    
T  10335066 tgcattgaaaattataatatttgactttttttatagaataatttattcttttggaattcttaaagagtgctccgaatgcactcgttaacaagaccct 10335162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 10893475 - 10893527
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttgg 236  Q
    |||||||||| || ||||| |||| ||||| || |||||||||||||||||||    
T  10893475 tgcattgaaatttataatatttgactttttgaatgaataatttttaaatttgg 10893527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 20279602 - 20279694
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||||||| |||| |||| ||||| |||||||||||  | | ||| ||||| ||||| ||||| ||| ||  ||| ||||||||||||||    
T  20279602 attgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaagaccct 20279694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 21066229 - 21066321
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||||||| |||| |||| ||||| |||||||||||  | | ||| ||||| ||||| ||||| ||| ||  ||| ||||||||||||||    
T  21066229 attgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaagaccct 21066321  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 31429339 - 31429283
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatg 240  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  31429339 tgcattggaaattgtaatagttgattttttaaaagaataatttttaaatatggaatg 31429283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 279
Target Start/End: Complemental strand, 8297933 - 8297838
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||| ||||||||| ||||||  |||| |||||||||||  ||||||||| ||| ||||| ||||| ||| ||  ||||||||||||||||||    
T  8297933 tgcattggaaattgtaacagttgacattttaaaagaataattactaaatttgggatgcttaaagagtgccccgggggcactcgttaacaagaccct 8297838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 281
Target Start/End: Original strand, 7444429 - 7444527
Alignment:
Q  184 tgcattgaaaattgtaatagttgagtttttt-aaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctat 281  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||| ||| ||||||||||   || |   ||||||||||||||||||||    
T  7444429 tgcattgaaaattgtaatagttgacttttttaaaagtataattactaaatttgggatgcttaaaaagtgtatcgggagcactcgttaacaagaccctat 7444527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 50341919 - 50341998
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaa 273  Q
    |||||||||||||||| ||||| |||||||||||  ||||||||||||| ||| ||||||| ||  ||| ||||||||||||    
T  50341919 aaattgtaatagttgactttttaaaagaataattactaaatttggaatgcttacaaagtgcccc--ggacactcgttaacaa 50341998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 11260621 - 11260552
Alignment:
Q  182 attgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||| |||||| | |||| |||||||||||||| |||||||||||   ||||||||||||||    
T  11260621 attgcattgaaatttgtaacatttgacttttttaaagaatattttttaaatttaagatgtttaaaaagtg 11260552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 281
Target Start/End: Complemental strand, 51834976 - 51834879
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctat 281  Q
    ||||||| ||||| |||||||||| ||||| |||||||||||  ||||||| | ||| ||||| ||||  ||| ||| |||| |||||||||||||||    
T  51834976 tgcattggaaattataatagttgactttttaaaagaataattgctaaatttaggatgcttaaagagtgtcccggggaaactcattaacaagaccctat 51834879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 279
Target Start/End: Complemental strand, 20394697 - 20394605
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||| |||||||||||||| | ||||| |||||||||||  ||||||||| ||| ||||| ||||||| |  || |||||||||||| |||||    
T  20394697 attggaaattgtaatagttcactttttaaaagaataattactaaatttgggatgcttaaagagtgctctggagacactcgttaacaaaaccct 20394605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 192 - 280
Target Start/End: Complemental strand, 41462103 - 41462015
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacccta 280  Q
    |||||||||||||||| ||||| |||||||||||  ||||| |  |||| ||||| ||||||||  ||| |||||||||||||| ||||    
T  41462103 aaattgtaatagttgactttttaaaagaataattactaaatataaaatgcttaaagagtgctccagggacactcgttaacaagatccta 41462015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 275
Target Start/End: Complemental strand, 48097989 - 48097923
Alignment:
Q  209 ttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaaga 275  Q
    |||||||||||||||||| | ||||| ||||  |||||||||||||||  || ||||||||||||||    
T  48097989 ttttttaaagaataatttcttaatttagaatacttaaaaagtgctccggagacactcgttaacaaga 48097923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 49084442 - 49084516
Alignment:
Q  181 aattgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctcc 255  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||  ||||||| | ||  ||||| ||||||||    
T  49084442 aatttcattgaaaattgtaatagttgactttttaaaagaataattactaaatttaggataattaaagagtgctcc 49084516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 279
Target Start/End: Complemental strand, 49400672 - 49400580
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||| |||||||||||||||| ||||| |||||||||||  ||||||| | ||| ||||| ||||||| | |   ||||||||||||||||||    
T  49400672 cattggaaattgtaatagttgattttttaaaagaataattactaaatttaggatgcttaaatagtgctctg-gagcactcgttaacaagaccct 49400580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 7852588 - 7852680
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    |||||||||||||||||||||| | ||||| |||||||||||  ||||||| | ||| ||||| ||||   ||| || |||||||||| ||||    
T  7852588 tgcattgaaaattgtaatagttaattttttaaaagaataattactaaatttaggatgcttaaagagtgtctcgaagacactcgttaacgagac 7852680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 27953085 - 27953176
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    |||||||||||||||||||||| | ||||| ||| ||||| |  ||||||||  ||| ||||| |||||||||  || |||||||||||||||    
T  27953085 tgcattgaaaattgtaatagttaactttttaaaataataa-tactaaatttgagatgcttaaagagtgctccggagacactcgttaacaagac 27953176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 51736413 - 51736361
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaat 239  Q
    |||||||||| |||||||||| ||||| |||||||||||  ||||||||||||    
T  51736413 attgaaaattataatagttgactttttaaaagaataattgctaaatttggaat 51736361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 14603788 - 14603890
Alignment:
Q  185 gcattgaaaattgtaatagttgagttttttaaagaataattttta-aatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctatta 283  Q
    ||||||||| |||||||| |||| ||||||||| |||| |||||  |||||||||||||||| || || |||   || ||||||||||||||||| | ||    
T  14603788 gcattgaaacttgtaatatttgaattttttaaaaaatattttttttaatttggaatgtttaagaa-tgttcctgagagactcgttaacaagacccgacta 14603886  T
Q  284 ataa 287  Q
    ||||    
T  14603887 ataa 14603890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 48337618 - 48337556
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaag-aataatttttaaatttggaatgtttaaa 246  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||||  | |||||||||    
T  48337618 tgcattgaaaattgtaatagttga-ttttttaaagaaataattgttaaattaaggatgtttaaa 48337556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 24981829 - 24981760
Alignment:
Q  209 ttttttaaagaataatttttaaatttggaatgtttaaaaagtg-ctccgaggatactcgttaacaagaccc 278  Q
    |||||||||||||| ||| |||||||| ||| ||||||||||| ||| | ||| |||||||||||||||||    
T  24981829 ttttttaaagaatattttctaaatttgaaatctttaaaaagtgtctcag-ggacactcgttaacaagaccc 24981760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 45900193 - 45900287
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    ||||||| ||||||| |||||||| ||| | |||||||||||  ||||||| | ||| ||||| |||||  || ||  |||||||||||||||||    
T  45900193 tgcattggaaattgtgatagttgactttataaaagaataattgctaaatttaggatgcttaaagagtgcctcgggggcactcgttaacaagaccc 45900287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 246
Target Start/End: Original strand, 50086452 - 50086514
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaa 246  Q
    ||||||||||||   |||| |||| ||||||||||||||||| || | |||||||||||||||    
T  50086452 tgcattgaaaatcaaaatatttgatttttttaaagaataattgtttattttggaatgtttaaa 50086514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 52101378 - 52101420
Alignment:
Q  213 ttaaagaataatttttaaatttggaatgtttaaaaagtgctcc 255  Q
    |||||||||||||||| ||||||| ||||||||| ||||||||    
T  52101378 ttaaagaataattttttaatttggtatgtttaaagagtgctcc 52101420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 24175443 - 24175547
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctatta 283  Q
    |||||| ||||||||||||||| | ||||  |||||||| ||  ||||||| | ||| ||||| ||||  |  |||| |||||||||||||||| |||||    
T  24175443 tgcatttaaaattgtaatagtttactttta-aaagaatatttactaaatttaggatgcttaaagagtgtcctaaggacactcgttaacaagaccttatta 24175541  T
Q  284 ataatt 289  Q
    ||||||    
T  24175542 ataatt 24175547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 37440886 - 37440829
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgttt 243  Q
    |||||||||||||||||||||| ||||| ||| |||||||  ||||||| | ||||||    
T  37440886 cattgaaaattgtaatagttgactttttaaaataataattactaaatttagcatgttt 37440829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 285
Target Start/End: Original strand, 41370212 - 41370313
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctatta 283  Q
    |||||||||||||| |||| || | |||||| |  |||||||| | |||||||| || ||||  |||||||||   | ||||||||||||||||||| ||    
T  41370212 tgcattgaaaattgaaatatttaacttttttgagaaataatttcttaatttggattgcttaatgagtgctccggaaacactcgttaacaagaccctaata 41370311  T
Q  284 at 285  Q
    ||    
T  41370312 at 41370313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 50427053 - 50427000
Alignment:
Q  182 attgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttg 235  Q
    ||||||||| |||||||||||||||| ||||  |||||||||||  ||||||||    
T  50427053 attgcattggaaattgtaatagttgacttttcaaaagaataattactaaatttg 50427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 276
Target Start/End: Original strand, 53014253 - 53014341
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    |||| |||||||||||||| | ||||| |||  ||||||  ||||||| | ||||||||||||||| || |||| || ||||||||||||    
T  53014253 attggaaattgtaatagttaattttttaaaaagataattactaaatttaggatgtttaaaaagtgc-ccaaggacacccgttaacaagac 53014341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 23504797 - 23504753
Alignment:
Q  190 gaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    ||||||| |||||||||| ||||| |||||||||||| |||||||    
T  23504797 gaaaattttaatagttgattttttaaaagaataatttctaaattt 23504753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 49532295 - 49532390
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagacccta 280  Q
    ||||||| |||||| | || |||| |||| ||||||||||||| | ||||||||||| ||| | ||||  ||| ||  |||||||||||||||||||    
T  49532295 tgcattggaaattgaattatttga-ttttataaagaataatttcttaatttggaatgcttacagagtgtcccgggggcactcgttaacaagacccta 49532390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 11720925 - 11720989
Alignment:
Q  187 attgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    ||||||||||||||||||||| || || ||||||||||| |||||||| | ||||||||| ||||    
T  11720925 attgaaaattgtaatagttgacttcttaaaagaataattgttaaatttaggatgtttaaagagtg 11720989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 276
Target Start/End: Original strand, 17215727 - 17215819
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagac 276  Q
    |||||||||||||||||||||||| ||||| ||| |||||||  |||||||  |||| ||||||||||  ||   || |||||||||||||||    
T  17215727 tgcattgaaaattgtaatagttgactttttaaaaaaataattactaaattttaaatgcttaaaaagtgtacctgagacactcgttaacaagac 17215819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 2086845 - 2086766
Alignment:
Q  209 ttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctattaataat 288  Q
    |||||||||||||||||| |  ||| |||||| ||||| |||| |||||| | ||||||||||||||| ||| |||||||    
T  2086845 ttttttaaagaataatttctccattaggaatgcttaaagagtgttccgagaacactcgttaacaagactctaataataat 2086766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 1841045 - 1840995
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    ||||||| |||||||||||||||| ||||| ||||||||||| ||||||||    
T  1841045 tgcattggaaattgtaatagttgattttttaaaagaataattattaaattt 1840995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 19293505 - 19293594
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctat 281  Q
    |||||||||||||| | ||||| ||| ||||||| |||||||| | ||| ||||| ||||  ||||| | ||||||||| ||||||||||    
T  19293505 aaattgtaatagttaactttttaaaataataattgttaaatttaggatgcttaaagagtgtcccgagaacactcgttaataagaccctat 19293594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 5446706 - 5446801
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    ||||||||||||||||| |||||| | ||  |||||||||||  ||| ||| ||||| ||| ||||||  ||  ||| ||||||||||||||||||    
T  5446706 tgcattgaaaattgtaacagttgactattcaaaagaataattactaattttagaatgcttacaaagtgtccctgggacactcgttaacaagaccct 5446801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 25028742 - 25028809
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtg 251  Q
    |||||||||||||| | |  |||| |||||||||||||||||||  ||||| ||||||||||| ||||    
T  25028742 tgcattgaaaattgaactgtttgacttttttaaagaataattttctaattttgaatgtttaaagagtg 25028809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 26669328 - 26669371
Alignment:
Q  189 tgaaaattgtaatagttgagttttttaaagaataatttttaaat 232  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  26669328 tgaaaattgtaatagttgactttttaaaagaataattattaaat 26669371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 1371208 - 1371274
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagt 250  Q
    |||||||||||||||   |||||| ||||| ||||||||||| ||||||||| |||  |||||||||    
T  1371208 tgcattgaaaattgtggaagttgactttttaaaagaataattattaaatttgaaatacttaaaaagt 1371274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 1378956 - 1379022
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagt 250  Q
    |||||||||||||||   |||||| ||||| ||||||||||| ||||||||| |||  |||||||||    
T  1378956 tgcattgaaaattgtggaagttgactttttaaaagaataattattaaatttgaaatacttaaaaagt 1379022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Complemental strand, 30509378 - 30509284
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||||||||||| | |||  |||| |||||||||||||||||  | | ||||| ||| ||||| |||| ||||  || |||||||||||||||||    
T  30509378 tgcattgaaaatcgaaatgtttgatttttttaaagaataattgcttattttggtatgcttaaagagtgttccggagacactcgttaacaagaccc 30509284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 3766331 - 3766271
Alignment:
Q  192 aaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgc 252  Q
    ||||||||||| |||| ||||| ||||||||||||  |||||||| ||| ||||| |||||    
T  3766331 aaattgtaataattgactttttaaaagaataatttccaaatttgggatgcttaaagagtgc 3766271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 7421734 - 7421678
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatg 240  Q
    ||||||||||||||||||| |||| ||||| ||  |||||||  |||||||||||||    
T  7421734 tgcattgaaaattgtaatatttgactttttaaataaataattactaaatttggaatg 7421678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 23399170 - 23399122
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaattt 234  Q
    ||||||||||| |||||||| | ||||| |||||||||||| |||||||    
T  23399170 cattgaaaattataatagttaactttttaaaagaataatttctaaattt 23399122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 23399250 - 23399222
Alignment:
Q  105 gaaatgttaacgagtgtctccgaaacact 133  Q
    |||||||||||||||||||||||||||||    
T  23399250 gaaatgttaacgagtgtctccgaaacact 23399222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 246
Target Start/End: Complemental strand, 25140 - 25078
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaag-aataatttttaaatttggaatgtttaaa 246  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||||  | |||||||||    
T  25140 tgcattgaaaattgtaatagttga-ttttttaaagaaataattgttaaattaaggatgtttaaa 25078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 1465 - 1422
Alignment:
Q  189 tgaaaattgtaatagttgagttttttaaagaataatttttaaat 232  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  1465 tgaaaattgtaatagttgactttttaaaagaataattattaaat 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 213590 - 213488
Alignment:
Q  185 gcattgaaaattgtaatagttgagttttttaaagaataattttta-aatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccctatta 283  Q
    ||||||||| |||||||| |||| ||||||||| |||| |||||  |||||||||||||||| || || |||   || ||||||||||||||||| | ||    
T  213590 gcattgaaacttgtaatatttgaattttttaaaaaatattttttttaatttggaatgtttaagaa-tgttcctgagagactcgttaacaagacccgacta 213492  T
Q  284 ataa 287  Q
    ||||    
T  213491 ataa 213488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 62569 - 62663
Alignment:
Q  184 tgcattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccc 278  Q
    |||||||||||| ||||||||||| ||||| |||||||||||  ||||| ||  ||| ||||| ||| | | |  || |||||||||||||||||    
T  62569 tgcattgaaaatcgtaatagttgactttttaaaagaataattactaaatatgagatgcttaaagagtaccctggagacactcgttaacaagaccc 62663  T

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Target: scaffold1444 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 978 - 1071
Alignment:
Q  186 cattgaaaattgtaatagttgagttttttaaagaataatttttaaatttggaatgtttaaaaagtgctccgaggatactcgttaacaagaccct 279  Q
    |||||||||||||||||||||| ||||| |||||| ||||  ||||||| | ||   || | |||| |||||| | ||||||||| ||||||||    
T  978 cattgaaaattgtaatagttgactttttaaaagaacaattgctaaatttaggatccatacagagtgttccgagtacactcgttaataagaccct 1071  T

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