View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18763_high_23 (Length: 270)
Name: NF18763_high_23
Description: NF18763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18763_high_23 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 13 - 270
Target Start/End: Original strand, 39986920 - 39987177
Alignment:
| Q |
13 |
aatatcaacctgatccttccctcaactccaccaccaccttaacaacttctagcagctctagatcctcaagacaaacaacatatcattattacaaccaaca |
112 |
Q |
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| T |
39986920 |
aatatcaacctgatccttccctcaactccaccaccaccttaacaacttctagcagctctagatcctcaagacaaacaacatatcattattacaaccaaca |
39987019 |
T |
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| Q |
113 |
agaagaagacgaagaatgcttcaacaacttttattacatggatcataataacaacaatgatgaagatttatcctcatcttcttctaaacaacactattat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39987020 |
agaagaagacgaagaatgcttcaacaacttttattacatggatcataataacaacaatgatgaagatttatcctcatcttcttctaaacaacactattat |
39987119 |
T |
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| Q |
213 |
acttatccttatgcttccactactaatatcactactccaaacactacttataatacta |
270 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
39987120 |
acttatccttatgcttccactactactatcactactccaaacactacttataatacta |
39987177 |
T |
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