View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18763_low_5 (Length: 565)

Name: NF18763_low_5
Description: NF18763
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18763_low_5
NF18763_low_5
[»] chr4 (55 HSPs)
chr4 (226-550)||(52912969-52913293)
chr4 (228-550)||(42723957-42724279)
chr4 (224-550)||(19873898-19874224)
chr4 (226-550)||(53874886-53875210)
chr4 (228-550)||(20434162-20434484)
chr4 (224-550)||(55215369-55215695)
chr4 (226-550)||(39540177-39540501)
chr4 (227-550)||(55219866-55220189)
chr4 (228-550)||(28406214-28406536)
chr4 (228-550)||(37233981-37234303)
chr4 (227-550)||(56362817-56363139)
chr4 (228-550)||(613823-614145)
chr4 (227-550)||(25857540-25857862)
chr4 (224-550)||(23894970-23895297)
chr4 (225-550)||(53035794-53036116)
chr4 (224-531)||(42348656-42348963)
chr4 (227-550)||(52839508-52839831)
chr4 (228-545)||(55183308-55183625)
chr4 (227-538)||(38291643-38291954)
chr4 (228-501)||(10541857-10542130)
chr4 (228-515)||(52307268-52307555)
chr4 (227-386)||(43830157-43830316)
chr4 (227-300)||(20737689-20737762)
chr4 (227-300)||(56018719-56018792)
chr4 (251-354)||(43458363-43458466)
chr4 (224-353)||(24896981-24897109)
chr4 (228-314)||(28803980-28804066)
chr4 (228-354)||(47467379-47467505)
chr4 (228-345)||(24034518-24034635)
chr4 (227-300)||(31709714-31709787)
chr4 (226-354)||(1522781-1522909)
chr4 (251-339)||(35339631-35339719)
chr4 (251-354)||(40430145-40430248)
chr4 (251-345)||(49306-49400)
chr4 (227-345)||(22847103-22847221)
chr4 (253-354)||(11682233-11682334)
chr4 (253-354)||(11690512-11690613)
chr4 (224-345)||(41202326-41202447)
chr4 (251-354)||(22301719-22301819)
chr4 (226-314)||(48990343-48990431)
chr4 (228-354)||(3026381-3026507)
chr4 (251-339)||(51322672-51322760)
chr4 (251-326)||(8713247-8713321)
chr4 (228-354)||(13962450-13962575)
chr4 (228-345)||(43621555-43621672)
chr4 (270-345)||(30217104-30217179)
chr4 (225-340)||(32932581-32932696)
chr4 (251-345)||(48349465-48349559)
chr4 (281-354)||(36851458-36851531)
chr4 (251-340)||(37828775-37828863)
chr4 (517-550)||(42348964-42348997)
chr4 (258-314)||(51322401-51322457)
chr4 (270-354)||(32135398-32135479)
chr4 (251-314)||(7318450-7318514)
chr4 (270-354)||(34159052-34159136)
[»] chr3 (55 HSPs)
chr3 (227-550)||(20835357-20835680)
chr3 (226-549)||(22781683-22782006)
chr3 (224-543)||(4515796-4516115)
chr3 (228-550)||(10841208-10841529)
chr3 (224-546)||(38871116-38871438)
chr3 (227-550)||(25710885-25711208)
chr3 (225-550)||(33712399-33712722)
chr3 (228-545)||(37971454-37971771)
chr3 (228-550)||(53974310-53974631)
chr3 (229-550)||(41069837-41070156)
chr3 (227-545)||(4044588-4044906)
chr3 (228-550)||(36430267-36430588)
chr3 (227-539)||(40585955-40586269)
chr3 (261-550)||(6268133-6268422)
chr3 (228-540)||(20048334-20048649)
chr3 (228-540)||(10999529-10999843)
chr3 (225-550)||(33966892-33967203)
chr3 (224-472)||(7156541-7156772)
chr3 (15-147)||(1361488-1361620)
chr3 (227-300)||(32236131-32236204)
chr3 (228-300)||(84388-84460)
chr3 (225-300)||(26090198-26090273)
chr3 (226-300)||(20657412-20657486)
chr3 (228-300)||(7679722-7679794)
chr3 (229-300)||(24395096-24395167)
chr3 (224-354)||(36885711-36885841)
chr3 (227-300)||(672066-672139)
chr3 (228-345)||(35039572-35039689)
chr3 (228-347)||(7680981-7681100)
chr3 (227-354)||(44354469-44354596)
chr3 (271-354)||(47098274-47098357)
chr3 (258-354)||(38145211-38145307)
chr3 (251-354)||(36232642-36232745)
chr3 (227-346)||(33392510-33392628)
chr3 (228-354)||(11123858-11123984)
chr3 (251-345)||(49779834-49779928)
chr3 (227-354)||(30418689-30418816)
chr3 (257-348)||(54556376-54556467)
chr3 (251-345)||(36841085-36841179)
chr3 (270-354)||(39627093-39627176)
chr3 (251-354)||(14279129-14279232)
chr3 (251-314)||(48584857-48584920)
chr3 (228-354)||(11095647-11095773)
chr3 (431-505)||(47098143-47098217)
chr3 (251-340)||(4596411-4596499)
chr3 (226-267)||(22786329-22786370)
chr3 (251-339)||(51662148-51662236)
chr3 (226-345)||(2613306-2613425)
chr3 (431-505)||(1774218-1774292)
chr3 (270-354)||(52343124-52343208)
chr3 (518-549)||(4044492-4044523)
chr3 (258-353)||(8947833-8947927)
chr3 (499-545)||(7156488-7156536)
chr3 (269-338)||(52812168-52812237)
chr3 (270-354)||(41588920-41589001)
[»] scaffold0391 (1 HSPs)
scaffold0391 (225-550)||(3872-4197)
[»] chr7 (48 HSPs)
chr7 (226-550)||(26015624-26015948)
chr7 (228-550)||(46321804-46322126)
chr7 (228-550)||(47065698-47066020)
chr7 (226-550)||(43246715-43247039)
chr7 (228-547)||(32541944-32542263)
chr7 (227-550)||(46923877-46924199)
chr7 (228-550)||(7900433-7900755)
chr7 (228-550)||(8215676-8215998)
chr7 (224-550)||(34591672-34591998)
chr7 (228-550)||(40705271-40705592)
chr7 (227-550)||(40995186-40995509)
chr7 (227-550)||(27324954-27325277)
chr7 (226-540)||(21278835-21279151)
chr7 (228-536)||(8203211-8203521)
chr7 (224-488)||(38875874-38876138)
chr7 (228-540)||(25876776-25877090)
chr7 (221-550)||(40994571-40994900)
chr7 (228-540)||(47779274-47779589)
chr7 (228-504)||(7790903-7791180)
chr7 (228-485)||(38283414-38283671)
chr7 (225-547)||(32662150-32662451)
chr7 (441-550)||(35924318-35924427)
chr7 (227-315)||(35924229-35924317)
chr7 (228-300)||(42095782-42095854)
chr7 (226-300)||(39074364-39074438)
chr7 (227-300)||(43047094-43047167)
chr7 (224-300)||(21874639-21874715)
chr7 (225-345)||(43775880-43776000)
chr7 (226-345)||(24980853-24980972)
chr7 (226-345)||(40862357-40862476)
chr7 (281-347)||(19021023-19021089)
chr7 (228-354)||(42436462-42436588)
chr7 (251-340)||(39597841-39597930)
chr7 (226-354)||(20492682-20492809)
chr7 (228-340)||(12847146-12847258)
chr7 (226-354)||(30173420-30173548)
chr7 (258-354)||(45870127-45870223)
chr7 (227-345)||(10594083-10594201)
chr7 (251-354)||(7883634-7883737)
chr7 (258-354)||(40305431-40305527)
chr7 (431-503)||(48642094-48642166)
chr7 (228-267)||(19687096-19687135)
chr7 (227-354)||(36688694-36688820)
chr7 (429-495)||(25765044-25765110)
chr7 (228-314)||(44709894-44709980)
chr7 (251-339)||(241705-241792)
chr7 (251-354)||(29042167-29042269)
chr7 (252-300)||(25764898-25764946)
[»] chr2 (34 HSPs)
chr2 (228-550)||(25853195-25853517)
chr2 (228-550)||(44143360-44143682)
chr2 (226-550)||(45505548-45505872)
chr2 (228-550)||(1481811-1482133)
chr2 (228-550)||(1520176-1520498)
chr2 (226-550)||(34202277-34202601)
chr2 (227-549)||(3178225-3178546)
chr2 (228-546)||(39697544-39697862)
chr2 (224-545)||(42342964-42343284)
chr2 (231-545)||(2390455-2390768)
chr2 (227-545)||(21657926-21658243)
chr2 (228-550)||(40811536-40811857)
chr2 (228-550)||(13195901-13196222)
chr2 (225-550)||(37094085-37094410)
chr2 (244-514)||(43577019-43577289)
chr2 (226-540)||(10638776-10639091)
chr2 (226-550)||(927062-927366)
chr2 (226-411)||(15011817-15012002)
chr2 (297-550)||(874953-875195)
chr2 (227-299)||(32551681-32551753)
chr2 (228-299)||(35895492-35895563)
chr2 (227-354)||(4331840-4331967)
chr2 (224-354)||(13480508-13480638)
chr2 (227-314)||(26170975-26171062)
chr2 (228-354)||(38629368-38629494)
chr2 (251-353)||(45443516-45443617)
chr2 (226-345)||(7722641-7722760)
chr2 (258-345)||(44456780-44456867)
chr2 (246-300)||(27980924-27980978)
chr2 (246-300)||(28067454-28067508)
chr2 (251-353)||(44798832-44798933)
chr2 (224-345)||(458577-458698)
chr2 (264-337)||(31569635-31569708)
chr2 (269-344)||(10554733-10554807)
[»] chr1 (54 HSPs)
chr1 (227-550)||(52024724-52025047)
chr1 (228-550)||(34270535-34270857)
chr1 (227-545)||(52044156-52044474)
chr1 (228-545)||(39569222-39569539)
chr1 (228-550)||(44721871-44722193)
chr1 (226-550)||(42948187-42948512)
chr1 (222-550)||(26150927-26151255)
chr1 (227-550)||(24317180-24317501)
chr1 (228-545)||(18909215-18909532)
chr1 (227-550)||(50727796-50728119)
chr1 (228-532)||(6653224-6653528)
chr1 (228-550)||(2138007-2138329)
chr1 (225-550)||(51677010-51677335)
chr1 (228-545)||(2482396-2482716)
chr1 (227-545)||(13942142-13942460)
chr1 (225-495)||(33010603-33010873)
chr1 (233-550)||(20581504-20581822)
chr1 (228-501)||(40400033-40400306)
chr1 (226-475)||(15932784-15933033)
chr1 (227-472)||(49823203-49823448)
chr1 (226-440)||(28852791-28853005)
chr1 (227-321)||(13240210-13240304)
chr1 (225-300)||(14247457-14247532)
chr1 (227-300)||(51290548-51290621)
chr1 (228-300)||(11173512-11173584)
chr1 (228-300)||(39982263-39982335)
chr1 (227-300)||(40536800-40536873)
chr1 (224-345)||(40498613-40498734)
chr1 (228-354)||(29922183-29922309)
chr1 (226-345)||(51001999-51002118)
chr1 (227-354)||(51776028-51776155)
chr1 (225-354)||(26307843-26307972)
chr1 (226-354)||(17605725-17605853)
chr1 (251-345)||(41712783-41712877)
chr1 (226-354)||(7009006-7009131)
chr1 (244-345)||(23444312-23444412)
chr1 (225-345)||(9640859-9640979)
chr1 (251-354)||(14290252-14290355)
chr1 (226-345)||(32086480-32086599)
chr1 (252-338)||(5672915-5673001)
chr1 (251-345)||(17474687-17474781)
chr1 (228-345)||(13146022-13146138)
chr1 (426-469)||(13240166-13240209)
chr1 (224-299)||(48933211-48933286)
chr1 (251-345)||(8114872-8114966)
chr1 (251-345)||(19247745-19247839)
chr1 (268-345)||(12601893-12601970)
chr1 (229-352)||(19514097-19514220)
chr1 (251-337)||(35273849-35273935)
chr1 (518-550)||(13942525-13942557)
chr1 (225-346)||(3485812-3485933)
chr1 (251-345)||(46291790-46291884)
chr1 (251-348)||(35841475-35841572)
chr1 (251-354)||(24527597-24527697)
[»] chr8 (49 HSPs)
chr8 (228-550)||(23357018-23357340)
chr8 (226-547)||(26122290-26122611)
chr8 (231-550)||(8376243-8376562)
chr8 (228-550)||(24822485-24822807)
chr8 (227-545)||(26337157-26337475)
chr8 (227-547)||(35605336-35605656)
chr8 (230-550)||(39365248-39365567)
chr8 (227-545)||(26290545-26290863)
chr8 (227-545)||(26303802-26304120)
chr8 (227-550)||(34564790-34565113)
chr8 (228-550)||(42512159-42512481)
chr8 (228-545)||(43664092-43664408)
chr8 (226-501)||(3032708-3032983)
chr8 (226-485)||(17122088-17122347)
chr8 (228-501)||(5988188-5988461)
chr8 (229-481)||(34917539-34917791)
chr8 (226-501)||(3137035-3137310)
chr8 (227-489)||(8656553-8656815)
chr8 (226-450)||(22439467-22439691)
chr8 (225-300)||(28885723-28885798)
chr8 (227-300)||(28909661-28909734)
chr8 (228-300)||(15839455-15839527)
chr8 (227-310)||(12713578-12713661)
chr8 (226-300)||(11587896-11587970)
chr8 (228-300)||(8013936-8014008)
chr8 (228-300)||(37577983-37578055)
chr8 (225-300)||(5599872-5599947)
chr8 (225-300)||(5640673-5640748)
chr8 (227-300)||(17601333-17601406)
chr8 (228-340)||(31793821-31793933)
chr8 (251-354)||(12722579-12722682)
chr8 (251-345)||(42687908-42688002)
chr8 (225-354)||(41942319-41942448)
chr8 (258-345)||(38168452-38168539)
chr8 (431-505)||(2828158-2828232)
chr8 (227-345)||(36057699-36057817)
chr8 (251-354)||(11266156-11266259)
chr8 (251-353)||(5347437-5347538)
chr8 (264-354)||(7969992-7970081)
chr8 (431-503)||(7969866-7969938)
chr8 (227-354)||(4005764-4005891)
chr8 (227-354)||(38460060-38460186)
chr8 (251-314)||(38945711-38945774)
chr8 (258-348)||(16571214-16571303)
chr8 (225-314)||(35329725-35329813)
chr8 (227-314)||(38234416-38234503)
chr8 (251-345)||(4229659-4229753)
chr8 (270-339)||(5552-5621)
chr8 (522-550)||(3032695-3032723)
[»] chr5 (40 HSPs)
chr5 (228-545)||(9065698-9066015)
chr5 (227-550)||(33280808-33281131)
chr5 (228-550)||(4155932-4156254)
chr5 (226-550)||(19034484-19034808)
chr5 (226-550)||(24559066-24559390)
chr5 (226-550)||(24600098-24600422)
chr5 (228-550)||(43293421-43293743)
chr5 (228-550)||(13145645-13145966)
chr5 (225-550)||(37865872-37866197)
chr5 (227-498)||(31527393-31527664)
chr5 (227-540)||(43518062-43518378)
chr5 (227-300)||(25084855-25084928)
chr5 (227-300)||(25142828-25142901)
chr5 (228-299)||(38760537-38760608)
chr5 (227-300)||(6469947-6470020)
chr5 (224-300)||(19617736-19617812)
chr5 (225-348)||(36294178-36294301)
chr5 (227-354)||(40738891-40739018)
chr5 (226-354)||(18864428-18864556)
chr5 (228-300)||(29920290-29920362)
chr5 (225-354)||(10666096-10666225)
chr5 (226-346)||(12189273-12189393)
chr5 (228-340)||(41881893-41882005)
chr5 (251-354)||(8232566-8232669)
chr5 (258-340)||(31484679-31484761)
chr5 (494-550)||(31511149-31511205)
chr5 (251-314)||(7338643-7338706)
chr5 (251-354)||(37274574-37274677)
chr5 (251-337)||(4621169-4621255)
chr5 (224-339)||(37340796-37340911)
chr5 (228-331)||(43548565-43548668)
chr5 (431-505)||(12189150-12189224)
chr5 (251-345)||(42437343-42437437)
chr5 (229-354)||(6245188-6245313)
chr5 (251-354)||(13210948-13211051)
chr5 (229-354)||(15272728-15272853)
chr5 (270-349)||(37105892-37105970)
chr5 (251-313)||(18978473-18978535)
chr5 (228-314)||(31498837-31498923)
chr5 (251-312)||(18522184-18522245)
[»] scaffold0368 (1 HSPs)
scaffold0368 (226-550)||(13860-14185)
[»] chr6 (25 HSPs)
chr6 (226-550)||(29122116-29122442)
chr6 (228-550)||(7141263-7141585)
chr6 (225-550)||(6625355-6625680)
chr6 (228-550)||(18893675-18893997)
chr6 (228-550)||(6167698-6168020)
chr6 (227-540)||(29630267-29630581)
chr6 (227-539)||(3094587-3094901)
chr6 (228-447)||(25335003-25335222)
chr6 (226-422)||(13889848-13890044)
chr6 (224-354)||(6925773-6925903)
chr6 (258-354)||(7081002-7081098)
chr6 (473-531)||(13889791-13889849)
chr6 (258-354)||(8811261-8811357)
chr6 (252-345)||(34085811-34085904)
chr6 (224-307)||(31091150-31091233)
chr6 (225-354)||(18024376-18024505)
chr6 (227-340)||(23350353-23350466)
chr6 (258-354)||(5714907-5715003)
chr6 (227-339)||(11369053-11369165)
chr6 (432-505)||(7081155-7081228)
chr6 (432-505)||(8811131-8811204)
chr6 (229-353)||(32173670-32173794)
chr6 (258-314)||(8525555-8525611)
chr6 (251-314)||(29623170-29623233)
chr6 (251-312)||(13445402-13445463)
[»] scaffold0438 (1 HSPs)
scaffold0438 (227-545)||(1882-2200)
[»] scaffold0007 (2 HSPs)
scaffold0007 (228-550)||(156878-157199)
scaffold0007 (251-312)||(200056-200117)
[»] scaffold0276 (2 HSPs)
scaffold0276 (226-550)||(13812-14135)
scaffold0276 (228-478)||(12520-12770)
[»] scaffold0248 (1 HSPs)
scaffold0248 (227-427)||(2909-3109)
[»] scaffold0065 (1 HSPs)
scaffold0065 (228-300)||(38424-38496)
[»] scaffold0896 (2 HSPs)
scaffold0896 (258-354)||(3708-3804)
scaffold0896 (432-505)||(3579-3651)
[»] scaffold0003 (1 HSPs)
scaffold0003 (258-354)||(365809-365905)
[»] scaffold0578 (1 HSPs)
scaffold0578 (229-352)||(8719-8842)


Alignment Details
Target: chr4 (Bit Score: 297; Significance: 1e-167; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 52913293 - 52912969
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  52913293 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 52913194  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  52913193 tttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 52913094  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  52913093 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 52912994  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  52912993 gttttccttgttctgcgattcacag 52912969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 42724279 - 42723957
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42724279 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 42724180  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  42724179 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 42724080  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  42724079 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 42723980  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  42723979 tttccttgttctgcgattcacag 42723957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 224 - 550
Target Start/End: Complemental strand, 19874224 - 19873898
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19874224 ttaagagtttttctacttgcaccctacttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcctt 19874125  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  19874124 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtc 19874025  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  19874024 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgatttt 19873925  T
Q  524 gtgttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||||    
T  19873924 gtgttttccttgttctgcgattcacag 19873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 53875210 - 53874886
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  53875210 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttct 53875111  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  53875110 tttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 53875011  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  53875010 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 53874911  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  53874910 gttttccttgttctgcgattcacag 53874886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 20434162 - 20434484
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20434162 gagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 20434261  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  20434262 tttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 20434361  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  20434362 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 20434461  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  20434462 tttccttgttctgcgattcacag 20434484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 224 - 550
Target Start/End: Complemental strand, 55215695 - 55215369
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  55215695 ttaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 55215596  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  55215595 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtc 55215496  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| |||||||    
T  55215495 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttattcaatcgattgtgtttttcttgttacgggttctcagttctgatttt 55215396  T
Q  524 gtgttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||||    
T  55215395 gtgttttccttgttctgcgattcacag 55215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 39540501 - 39540177
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  39540501 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 39540402  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  39540401 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 39540302  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  39540301 ttcatgatttcaaagaaaattcgaaacaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 39540202  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    ||||| ||| |||||||||||||||    
T  39540201 gtttttcttattctgcgattcacag 39540177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 55219866 - 55220189
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55219866 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 55219965  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  55219966 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacatccat 55220065  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  55220066 tcatgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctcagttctgattttgtg 55220165  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  55220166 ttttccttgttctgcgattcacag 55220189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 28406536 - 28406214
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||    
T  28406536 gagtttttctccttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagtctattccttcttt 28406437  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  28406436 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 28406337  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  28406336 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 28406237  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  28406236 tttccttgttctgcgattcacag 28406214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 37234303 - 37233981
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  37234303 gagtttttctacttgcaccttagttaattatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 37234204  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  37234203 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 37234104  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  37234103 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 37234004  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  37234003 tttccttgttctgcgattcacag 37233981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 56362817 - 56363139
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  56362817 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttctt 56362916  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  56362917 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 56363016  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||||||    
T  56363017 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctccgttctgattttgtg 56363115  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  56363116 ttttccttgttctgcgattcacag 56363139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 613823 - 614145
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  613823 gagtttttctacttgcaccccagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctct 613922  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  613923 tttggttacaccccaaaacccttcttccaaaaccataattctgcaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 614022  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||    
T  614023 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttcttagttctgattttgtgt 614122  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  614123 tttccttgttctgcgattcacag 614145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 25857540 - 25857862
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25857540 agagtttttctacttgcaccctaat-aatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttctt 25857638  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||    
T  25857639 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccat 25857738  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25857739 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtg 25857838  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  25857839 ttttccttgttctgcgattcacag 25857862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 224 - 550
Target Start/End: Complemental strand, 23895297 - 23894970
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  23895297 ttaagagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 23895198  T
Q  324 ctttttt-ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgt 422  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  23895197 ctttttttggttacaccccaaaaccattcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgt 23895098  T
Q  423 ccattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattt 522  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  23895097 ccattcatgatttcgaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattt 23894998  T
Q  523 tgtgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||||    
T  23894997 tgtgttttccttgttctgcgattcacag 23894970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 225 - 550
Target Start/End: Complemental strand, 53036116 - 53035794
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||    
T  53036116 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaa---cctattccttc 53036020  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  53036019 ttttttggttacaccccaaaacccttcttccaaaaccataattatccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 53035920  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||    
T  53035919 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaaatgttgttcttcaatcgattgtatttttcttgttacggattctcagttctgattttg 53035820  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||    
T  53035819 tgttttccttgttctgcgattcacag 53035794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 224 - 531
Target Start/End: Original strand, 42348656 - 42348963
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  42348656 ttaagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 42348755  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  42348756 cttttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtc 42348855  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  42348856 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgatttt 42348955  T
Q  524 gtgttttc 531  Q
    ||||||||    
T  42348956 gtgttttc 42348963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 227 - 550
Target Start/End: Complemental strand, 52839831 - 52839508
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  52839831 agagtttttctacttgcatcctagttaatcatggttgcaccccaaaacgacaaaattaccctttcataaaatttgattttcaaaaagcttattccttctt 52839732  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  52839731 ttttggttacaccccaaaacccttcttccaaaaccatgattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 52839632  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  52839631 tcatgatttcaaagaaaattcgaagcaaatcaggttatcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgattttgtg 52839532  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  52839531 ttttccttgttctgcgattcacag 52839508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 228 - 545
Target Start/End: Complemental strand, 55183625 - 55183308
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  55183625 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattactctttcataaaatttgattttcaaaaagcctattccttcttt 55183526  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||    
T  55183525 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaataccatactttctcacgtccatt 55183426  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  || |||||||||||    
T  55183425 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctcttttctgattttgtgt 55183326  T
Q  528 tttccttgttctgcgatt 545  Q
    ||||||||||||||||||    
T  55183325 tttccttgttctgcgatt 55183308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 227 - 538
Target Start/End: Complemental strand, 38291954 - 38291643
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  38291954 agagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttctt 38291855  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38291854 ttttggttacaccctaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 38291755  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |    
T  38291754 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatccattgtgtttttcttgttatgggttctcagttctgattttgag 38291655  T
Q  527 ttttccttgttc 538  Q
    ||||||||||||    
T  38291654 ttttccttgttc 38291643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 228 - 501
Target Start/End: Complemental strand, 10542130 - 10541857
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  |||||    
T  10542130 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattctttcttt 10542031  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  10542030 cttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 10541931  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtt 501  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10541930 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttccttgtt 10541857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 228 - 515
Target Start/End: Complemental strand, 52307555 - 52307268
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||  |||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  52307555 gagtttttctacttacaccctagttaatcatggttgcatcctaaaatgataagattatcctttcataaaatttaattttcaaaaagcctattccttcttt 52307456  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     |||||||||||||||||  | |||||||||||||||||||||||||||||| |||||||| ||||| |||||| |||| ||||||||||||||||||||    
T  52307455 cttggttacaccccaaaattcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgatgatttttaaaatcatactttctcacgtccatt 52307356  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtt 515  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52307355 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagtt 52307268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 227 - 386
Target Start/End: Complemental strand, 43830316 - 43830157
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43830316 agagtttttctccttgcaccctagttaatcatggttgcacctcaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttctt 43830217  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtg 386  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43830216 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtg 43830157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 20737689 - 20737762
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20737689 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 20737762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 56018792 - 56018719
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56018792 agagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 56018719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 43458466 - 43458363
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  | |||| | ||| |||||||||||| |||| || |    
T  43458466 ttaatcatggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatcttccttttttcttggttacaccctaaaatccct 43458367  T
Q  351 cttc 354  Q
    ||||    
T  43458366 cttc 43458363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 224 - 353
Target Start/End: Original strand, 24896981 - 24897109
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  ||| |  |||||| ||||| |||||||||||||||| ||||| |||||||||||||| | ||||||||||||| |||| |    
T  24896981 ttaagagtttttctaattacaccttgtttaatcctggttacaccccaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcc-t 24897079  T
Q  324 cttttttggttacaccccaaaacccttctt 353  Q
     ||| | |||||||||||||||||| ||||    
T  24897080 ttttgtcggttacaccccaaaacccctctt 24897109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 28804066 - 28803980
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    ||||||||||| ||| |||||  ||||||||||||| |||| |||||||||| ||||||||| |||||||||| |||||||||||||    
T  28804066 gagtttttctaattgcaccctgtttaatcatggttgtaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagc 28803980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 228 - 354
Target Start/End: Complemental strand, 47467505 - 47467379
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  ||||||||||||||| ||||||||||||| ||||||||| ||||||||||  |||| ||||||| | |||| | |||    
T  47467505 gagtttttctaattacaccctgtttaatcatggttgcatcccaaaatgacaaaattacccttccataaaatttagtttttaaaaagcatcttcctttttt 47467406  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  47467405 cttggttacaccctaaaatccctcttc 47467379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 345
Target Start/End: Original strand, 24034518 - 24034635
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||  |||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | |||    
T  24034518 gagtttttctaattacaccctgtttaattctggttgtaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 24034617  T
Q  328 tttggttacaccccaaaa 345  Q
     |||||||||||| ||||    
T  24034618 cttggttacaccctaaaa 24034635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 31709714 - 31709787
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||| |||||||||||||||||  ||||||||||||||| ||||| |||||||||    
T  31709714 agagtttttctacttgcaccctaattaatcatggttgcaccttaaaatgacaagattatccttttataaaattt 31709787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 1522781 - 1522909
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| || ||||||  |||||| |||||||| || |||||||||| ||||| ||| |||||||||| ||||||||||||| | || | | |    
T  1522781 aagagtttttctaattataccctgtttaatcctggttgcatcctaaaatgacaaaattactcttccataaaatttaattttcaaaaagcatctttctttt 1522880  T
Q  326 tttttggttacaccccaaaacccttcttc 354  Q
    || |||||||||||| |||| || |||||    
T  1522881 ttcttggttacaccctaaaatccctcttc 1522909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 35339719 - 35339631
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacacc 339  Q
    |||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||| | |||  | ||| |||||||||||    
T  35339719 ttaatcctggttgcaccctaaaatgacaagattacccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacacc 35339631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 40430145 - 40430248
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||| | |||  | ||| |||||||||||| |||| || |    
T  40430145 ttaatcctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttctttttttcttggttacaccctaaaatccct 40430244  T
Q  351 cttc 354  Q
    ||||    
T  40430245 cttc 40430248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 49400 - 49306
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| ||||||||| | |||||||||| |||||||||||||||||||| ||||| ||||||| | |||| | ||| |||||||||||| ||||    
T  49400 ttaatcttggttgcactctaaaatgacaaaattaccctttcataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaa 49306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 22847103 - 22847221
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||||||||||||||||||  |||| | ||||||||||||| ||||||||||||| | |||| | ||    
T  22847103 agagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatcttttcataaaatttaattttcaaaaagcatcttccgtttt 22847202  T
Q  327 ttttggttacaccccaaaa 345  Q
    ||||  |||||||| ||||    
T  22847203 tttttattacaccctaaaa 22847221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 11682233 - 11682334
Alignment:
Q  253 aatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttct 352  Q
    |||| ||||||||||| ||||||| || |||| ||||||||||||||| ||||||||||||| | |||| | ||| |||||||||||| |||| || |||    
T  11682233 aatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctct 11682332  T
Q  353 tc 354  Q
    ||    
T  11682333 tc 11682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 11690512 - 11690613
Alignment:
Q  253 aatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttct 352  Q
    |||| ||||||||||| ||||||| || |||| ||||||||||||||| ||||||||||||| | |||| | ||| |||||||||||| |||| || |||    
T  11690512 aatcctggttgcaccctaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctct 11690611  T
Q  353 tc 354  Q
    ||    
T  11690612 tc 11690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 224 - 345
Target Start/End: Complemental strand, 41202447 - 41202326
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  ||| |  |||||| |||||||||||||||||||||  |||| |||| |||||||||| |||||||||| || | |||| |    
T  41202447 ttaagagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaatgcatcttcctt 41202348  T
Q  324 cttttttggttacaccccaaaa 345  Q
     ||| |||||||||||| ||||    
T  41202347 ttttcttggttacaccctaaaa 41202326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 22301819 - 22301719
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||| |||| |||| |  |  ||||||||||||||| |    
T  22301819 ttaatcctggttgcaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttcttctcgg--tacaccccaaaacccct 22301723  T
Q  351 cttc 354  Q
    ||||    
T  22301722 cttc 22301719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 48990343 - 48990431
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    ||||||||||||| ||  |||||| |||||| | ||||||||| ||||||| || ||||||||| |||||||||| |||||||||||||    
T  48990343 aagagtttttctaattacaccctatttaatcctcgttgcaccctaaaatgataaaattacccttccataaaatttaattttcaaaaagc 48990431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 354
Target Start/End: Original strand, 3026381 - 3026507
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  | |||| || ||||| || |||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | |||    
T  3026381 gagtttttctaattaaaccctgttaaatcctgattgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 3026480  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  3026481 cttggttacaccctaaaatccctcttc 3026507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 51322672 - 51322760
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacacc 339  Q
    |||||| |||||||||| |||||||| || |||| ||||||||||||||| ||||||||||||| | || | | ||| |||||||||||    
T  51322672 ttaatcttggttgcacctcaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatttttcttttttcttggttacacc 51322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 8713247 - 8713321
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||| | ||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||| ||||    
T  8713247 ttaatccttgttacaccccaaaatgacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttctt 8713321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 228 - 354
Target Start/End: Complemental strand, 13962575 - 13962450
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| | |||||||||||||||||||| |||||| || ||||||| || ||||||||||||| |  ||| | |||    
T  13962575 gagtttttctaattacaccctgtttaatcctagttgcaccccaaaatgacaaaattacctttccataaaa-ttaattttcaaaaagcatcatcctttttt 13962477  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  13962476 cttggttacaccctaaaatccctcttc 13962450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 228 - 345
Target Start/End: Complemental strand, 43621672 - 43621555
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| || ||||| || |||||||||| |||| ||||| ||||||||| ||||||||||| | | |||| | |||    
T  43621672 gagtttttctaattacaccctttttaatcctgattgcatcctaaaatgacaaaattatccttttataaaatttaattttcaaaaatcatcttcctttttt 43621573  T
Q  328 tttggttacaccccaaaa 345  Q
     |||||||||||| ||||    
T  43621572 cttggttacaccctaaaa 43621555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 345
Target Start/End: Complemental strand, 30217179 - 30217104
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||||||| |||| |||| |||||||||| ||||||||||||| | |||| | ||| |||||||||||| ||||    
T  30217179 aaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 30217104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 340
Target Start/End: Original strand, 32932581 - 32932696
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||| || || |||  |||||  |||||||| | ||||||||||| |||||  ||||||||||||| ||||| ||||||| | |||  |     
T  32932581 taagagtttttctaattatatcctgtttaattctggttgcatctcaaaatgacaaaattacattttcataaaatttaattttaaaaaagcatcttctttt 32932680  T
Q  325 ttttttggttacaccc 340  Q
    ||| ||||||||||||    
T  32932681 tttcttggttacaccc 32932696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 48349559 - 48349465
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||| || | ||||||| || |||||| ||| ||||||||| |||||||||||| || |||| | ||| |||||||||||| ||||    
T  48349559 ttaatcctggttgtactctaaaatgataaaattacctttttataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaa 48349465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 36851458 - 36851531
Alignment:
Q  281 attaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||||||||||||| |||||||||||| || |||| | ||| || ||||||||| |||| || |||||    
T  36851458 attaccctttcataaaatttaattttcaaaaagactcttccttttttcttagttacaccctaaaatccctcttc 36851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 37828775 - 37828863
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccc 340  Q
    |||||| ||||||||   |||||| |||| |||||||| ||||||||||| ||||||||||| | | |||| | ||||||||||||||||    
T  37828775 ttaatcttggttgcatatcaaaataacaaaattaccctctcataaaatttaattttcaaaaaacatcttcc-ttttttttggttacaccc 37828863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 517 - 550
Target Start/End: Original strand, 42348964 - 42348997
Alignment:
Q  517 tgattttgtgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||||||||||    
T  42348964 tgattttgtgttttccttgttctgcgattcacag 42348997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 51322457 - 51322401
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||||| ||||||| || || ||||||||| |||||||||| |||||||||||||    
T  51322457 tggttgcatcccaaaaggataaaattacccttccataaaatttaattttcaaaaagc 51322401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 32135398 - 32135479
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||| |||||| ||||||||||||| ||||| ||||||||| |||| |||| |  |  ||||||||||||||| |||||    
T  32135398 aaaatgacaaaattaccttttcataaaatttaatttt-aaaaagcctcttccttcttctcgg--tacaccccaaaacccctcttc 32135479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 7318450 - 7318514
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagatta-ccctttcataaaatttgattttcaaaaagc 314  Q
    |||||| || ||||||| |||||| |||| |||| ||||| |||||||||| |||||||||||||    
T  7318450 ttaatcctgattgcacctcaaaattacaaaattatcccttccataaaatttaattttcaaaaagc 7318514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 34159052 - 34159136
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||| |||| ||||  ||||||||| ||||||||||||| | |||  | ||| |||||||||||| |||| || |||||    
T  34159052 aaaatgacaaaattatccttctataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatccctcttc 34159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 296; Significance: 1e-166; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 227 - 550
Target Start/End: Complemental strand, 20835680 - 20835357
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20835680 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 20835581  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  20835580 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 20835481  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  20835480 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtg 20835381  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  20835380 ttttccttgttctgcgattcacag 20835357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 226 - 549
Target Start/End: Complemental strand, 22782006 - 22781683
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22782006 aagagtttttctacttgcaccctagttaatcatggttgcaccacaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 22781907  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  22781906 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 22781807  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  22781806 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 22781707  T
Q  526 gttttccttgttctgcgattcaca 549  Q
    ||||||||||||||||||||||||    
T  22781706 gttttccttgttctgcgattcaca 22781683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 224 - 543
Target Start/End: Complemental strand, 4516115 - 4515796
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4516115 ttaagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcctt 4516016  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  4516015 cttttttggttacaccccaaaacctttcttccaaaaccataattctccaatcgattcattgtgttctgcgaagattttcaaaaccatactttctcacgtc 4515916  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4515915 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgatttt 4515816  T
Q  524 gtgttttccttgttctgcga 543  Q
    ||||||||||||||||||||    
T  4515815 gtgttttccttgttctgcga 4515796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 10841529 - 10841208
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10841529 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 10841430  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10841429 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 10841330  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| | |||||||||    
T  10841329 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttctcttgttatgggttctcagttctaattttgtgt 10841231  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  10841230 tttccttgttctgcgattcacag 10841208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 224 - 546
Target Start/End: Original strand, 38871116 - 38871438
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38871116 ttaagagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcctt 38871215  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38871216 cttttttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtc 38871315  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  38871316 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgatttt 38871415  T
Q  524 gtgttttccttgttctgcgattc 546  Q
    |||||||||||||||||||||||    
T  38871416 gtgttttccttgttctgcgattc 38871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 25710885 - 25711208
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25710885 agagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 25710984  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||    
T  25710985 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccatattttctcacgtccat 25711084  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  25711085 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgattttgtg 25711184  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  25711185 ttttccttgttctgcgattcacag 25711208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 225 - 550
Target Start/End: Complemental strand, 33712722 - 33712399
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33712722 taagagtttttc-acttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 33712624  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  33712623 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 33712524  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  33712523 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgattttg 33712425  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||    
T  33712424 tgttttccttgttctgcgattcacag 33712399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 228 - 545
Target Start/End: Complemental strand, 37971771 - 37971454
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||    
T  37971771 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcattcttt 37971672  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  37971671 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccatt 37971572  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  37971571 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 37971472  T
Q  528 tttccttgttctgcgatt 545  Q
    ||||||||||||||||||    
T  37971471 tttccttgttctgcgatt 37971454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 53974310 - 53974631
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  53974310 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattacccattcataaaatttgattttcaaaaagcctattccttcttt 53974409  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  53974410 tttggttacaccccaaaacccttcttccaaaaccataattctccaatccatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 53974509  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  53974510 catgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgattttgtgt 53974608  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  53974609 tttccttgttctgcgattcacag 53974631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 229 - 550
Target Start/End: Original strand, 41069837 - 41070156
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttt 328  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41069837 agtttttctacttgcaccctagttaatcatggttgcacct-aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctttt 41069935  T
Q  329 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattc 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41069936 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccattc 41070035  T
Q  429 atgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgtt 528  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | ||||||||||    
T  41070036 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctaattttgtgtt 41070134  T
Q  529 ttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||    
T  41070135 ttccttgttctgcgattcacag 41070156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 227 - 545
Target Start/End: Complemental strand, 4044906 - 4044588
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4044906 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 4044807  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  4044806 ttttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtccat 4044707  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  4044706 tcatgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgattttgtg 4044607  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||||||||||||||||||    
T  4044606 ttttccttgttctgcgatt 4044588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 36430267 - 36430588
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||    
T  36430267 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattactctttgataaaatttgattttcaaaaagcctattccttcttt 36430366  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36430367 ttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 36430466  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||    
T  36430467 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctaattttgtgt 36430565  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  36430566 tttccttgttctgcgattcacag 36430588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 227 - 539
Target Start/End: Complemental strand, 40586269 - 40585955
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  40586269 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 40586170  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  40586169 ttttggttacaccccaaaacctttcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccat 40586070  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gattttg 524  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |  |||||||    
T  40586069 tcatgattttaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcagttctgcgattttg 40585970  T
Q  525 tgttttccttgttct 539  Q
    |||||||||||||||    
T  40585969 tgttttccttgttct 40585955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 261 - 550
Target Start/End: Complemental strand, 6268422 - 6268133
Alignment:
Q  261 ttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttccaaaac 360  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||    
T  6268422 ttgcaccccaaaatgacaagattaccctttcctaaaatttgattttcaaaaagcctattccttctttttttattacaccccaaaaccgttcttccaaaac 6268323  T
Q  361 cataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagtaaatcagg 460  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6268322 cataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcagg 6268223  T
Q  461 ttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  6268222 ttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttcttagttctgattttgtgttttccttgttctgcgattcacag 6268133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 228 - 540
Target Start/End: Original strand, 20048334 - 20048649
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  20048334 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 20048433  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     |||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  20048434 cttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccatt 20048533  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtg-tttttcttgttatggattctcagt--tttgattttg 524  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||  || |||||||    
T  20048534 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctcagttcttcgattttg 20048633  T
Q  525 tgttttccttgttctg 540  Q
    ||||||||||||||||    
T  20048634 tgttttccttgttctg 20048649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 228 - 540
Target Start/End: Complemental strand, 10999843 - 10999529
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  10999843 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 10999744  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     ||||||||| |||||||||| |||||||||||||||||||| |||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||    
T  10999743 cttggttacatcccaaaacccctcttccaaaaccataattctgcaatagatcgattgtgttctgcgaagaatttcaaaaccatactttctcacgtccatt 10999644  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagt--tttgattttgt 525  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||  |  ||||||||    
T  10999643 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttcttatgggttctcagtactgcgattttgt 10999544  T
Q  526 gttttccttgttctg 540  Q
    |||||||||||||||    
T  10999543 gttttccttgttctg 10999529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 225 - 550
Target Start/End: Original strand, 33966892 - 33967203
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  33966892 taagagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttc 33966991  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    |||||||||||||||||||              |||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||    
T  33966992 ttttttggttacaccccaa--------------aaccataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacatcc 33967077  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  33967078 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttg 33967177  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||    
T  33967178 tgttttccttgttctgcgattcacag 33967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 224 - 472
Target Start/End: Complemental strand, 7156772 - 7156541
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| || ||||||| |    
T  7156772 ttaagagtttttctacttgcaccctagttaatcatggttgcatcccaaaatgataagattaccctttcataaaatttgattttcaaagagtctattcctt 7156673  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||| |||||||||||||||||| ||||||||||||||| |||||||| ||||| |                 |||||||||||||||||||||||||    
T  7156672 ctttttaggttacaccccaaaacccctcttccaaaaccatatttctccaaacgatcga-----------------tttcaaaaccatactttctcacgtc 7156590  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgtt 472  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||    
T  7156589 ctttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 7156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 1361488 - 1361620
Alignment:
Q  15 aaatagtagtgtgtaccagagagagtaaagagaggtggaatacgagtacttcaatcaacaacagtctcatctttgattagatttctaaaacattgatgaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1361488 aaatagtagtgtgtaccagagagagtaaagagaggtggaatacgagtacttcaatcaacaacagtctcatctttgattagatttctaaaacattgatgaa 1361587  T
Q  115 atgaaaggatcgtgaacataaattcaacttcaa 147  Q
    |||||||||||||||||||||||||||||||||    
T  1361588 atgaaaggatcgtgaacataaattcaacttcaa 1361620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 32236131 - 32236204
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32236131 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 32236204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 84388 - 84460
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  84388 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 84460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 26090198 - 26090273
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26090198 taagagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaattt 26090273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 20657486 - 20657412
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  20657486 aagagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 20657412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 7679794 - 7679722
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7679794 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 7679722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 229 - 300
Target Start/End: Original strand, 24395096 - 24395167
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24395096 agtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 24395167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 224 - 354
Target Start/End: Complemental strand, 36885841 - 36885711
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  |||||  |||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||| | |||| |    
T  36885841 ttaagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaattttattttcaaaaagcatcttcctt 36885742  T
Q  324 cttttttggttacaccccaaaacccttcttc 354  Q
     ||| |||||||||||| |||| || |||||    
T  36885741 ttttcttggttacaccctaaaatccctcttc 36885711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 672066 - 672139
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  672066 agagtttttctagttgcaccctagttaatcatggttgcactccaaaatgataagattaccctttcataaaattt 672139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 228 - 345
Target Start/End: Original strand, 35039572 - 35039689
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | |||    
T  35039572 gagtttttctaattacaccctttttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 35039671  T
Q  328 tttggttacaccccaaaa 345  Q
     |||||||||||| ||||    
T  35039672 cttggttacaccctaaaa 35039689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 228 - 347
Target Start/End: Complemental strand, 7681100 - 7680981
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||| |||||  ||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | |||    
T  7681100 gagtttttctaattacaccctatttaattctggttgcaccctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 7681001  T
Q  328 tttggttacaccccaaaacc 347  Q
     |||||||||||| ||||||    
T  7681000 cttggttacaccctaaaacc 7680981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 44354596 - 44354469
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||||||||||||||||||  |||| |||| |||||||||| ||||||||||| | |||||||| ||    
T  44354596 agagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaaacatattccatttt 44354497  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    | |||||||||||| ||||  |||||||    
T  44354496 tcttggttacaccctaaaattcttcttc 44354469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 47098357 - 47098274
Alignment:
Q  271 aaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||||||| ||||||||| |||||||||| |||||||||||| || |||| ||||| ||||||||||||||||||||||||||    
T  47098357 aaatgacaaaattacccttgcataaaatttcattttcaaaaagtctcttccttctttcttggttacaccccaaaacccttcttc 47098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 38145307 - 38145211
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| || |||| | ||| |||||||||||| |||| || |||||    
T  38145307 tggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 38145211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 36232745 - 36232642
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||| || |||| | ||| |||||||||||| |||| || |    
T  36232745 ttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttccttttttcttggttacaccctaaaatccct 36232646  T
Q  351 cttc 354  Q
    ||||    
T  36232645 cttc 36232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 346
Target Start/End: Original strand, 33392510 - 33392628
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||| |||||| |||||  ||||||||||||||| |||||| ||||||||||||| |||||||||||| || |||| | ||    
T  33392510 agagtttttctaattacaccctatttaatcctggttataccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagtcttttcc-tttt 33392608  T
Q  327 ttttggttacaccccaaaac 346  Q
    | | ||||||| ||||||||    
T  33392609 tctcggttacatcccaaaac 33392628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 354
Target Start/End: Original strand, 11123858 - 11123984
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  || ||| |||||| ||||||| |||||||||||||| ||||||||| |||||||||| ||||||||||||  | || | | |||    
T  11123858 gagtttttctaattacactctatttaatcctggttgcgccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatctttctttttt 11123957  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  11123958 cttggttacaccctaaaatccctcttc 11123984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 49779928 - 49779834
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||||| ||||||||||||| |||| | ||||||||||||| ||||||||||||| | |||| | ||| |||||||||||| ||||    
T  49779928 ttaatcttggttgcatcccaaaatgacaaaattatcttttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 49779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 30418689 - 30418816
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||||||| ||||| |||||||||||  |||| ||||  ||||||||| ||||||||||||| | |||| | ||    
T  30418689 agagtttttctaattacaccctgtttaatcatggctgcactccaaaatgacagaattatccttctataaaatttaattttcaaaaagcatcttccttttt 30418788  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    | |||||||||||| ||||  |||||||    
T  30418789 tcttggttacaccctaaaattcttcttc 30418816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 257 - 348
Target Start/End: Original strand, 54556376 - 54556467
Alignment:
Q  257 atggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccc 348  Q
    |||||| || || ||||||| || |||||||||||||||||||||||||| ||||||  | |||| ||| | ||||||||||||||||||||    
T  54556376 atggttacatcctaaaatgataaaattaccctttcataaaatttgatttttaaaaagtttcttccttctctcttggttacaccccaaaaccc 54556467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 36841179 - 36841085
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||| ||| |||||||| || ||||||||| |||||||||| ||||||||||||| | |||| | ||| |||||||||||| ||||    
T  36841179 ttaatcctggttgtacctcaaaatgataaaattacccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 36841085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 39627176 - 39627093
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||| |||| ||||| ||||||||| ||||| ||||||  | |||| |||||||||||||||||||||||||| |||||    
T  39627176 aaaatgacaaaattatccttttataaaattt-atttttaaaaagtattttccttcttttttggttacaccccaaaacccctcttc 39627093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 14279129 - 14279232
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||||||||| |||||||||| |||||  || |||||||||| ||||||||||||| | |||  | ||| |||||||||||| |||| || |    
T  14279129 ttaatcctggttgcaccctaaaatgacaaaattacttttccataaaatttaattttcaaaaagcatgttcattttttcttggttacaccctaaaatccct 14279228  T
Q  351 cttc 354  Q
    ||||    
T  14279229 cttc 14279232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 48584857 - 48584920
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||| |||||| || |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  48584857 ttaatcctggttgtactccaaaatgacaaaattatcctttcataaaatttaattttcaaaaagc 48584920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 228 - 354
Target Start/End: Original strand, 11095647 - 11095773
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||| |||||| |||||||| |  |||||||||| | |||||||  |||| |||| ||||||||||||| | |||| | |||    
T  11095647 gagtttttctaattacaccctatttaatcctggttgcatcataaaatgacaaaaatacccttctataatatttaattttcaaaaagcatcttcctttttt 11095746  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  11095747 cttggttacaccctaaaatccctcttc 11095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 431 - 505
Target Start/End: Complemental strand, 47098217 - 47098143
Alignment:
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgg 505  Q
    |||| ||||||||||| |||| |||| ||||||||||||  |||||||||||| ||| |||||||||||| ||||    
T  47098217 gattgcaaagaaaatttgaagcaaataaggttagcaagttgtgttcttcaatcaattatgtttttcttgtcatgg 47098143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 4596499 - 4596411
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccc 340  Q
    |||||| | |||||| ||||||||||||| ||||||||| ||||||| || ||||||||||||| | |||| | ||| ||||||||||||    
T  4596499 ttaatcctagttgcatcccaaaatgacaaaattacccttccataaaa-ttaattttcaaaaagcatcttccttttttcttggttacaccc 4596411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 22786370 - 22786329
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcacc 267  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  22786370 aagagtttttctacttgcaccctagttaatcatggttgcacc 22786329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 339
Target Start/End: Complemental strand, 51662236 - 51662148
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacacc 339  Q
    |||||| |||||||| || ||||||| || |||| |||| |||||||||| ||||||||||||| | |||| | ||| |||||||||||    
T  51662236 ttaatcctggttgcatcctaaaatgataaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacacc 51662148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 345
Target Start/End: Complemental strand, 2613425 - 2613306
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    |||||| |||||| ||  |||||  |||||| ||||||||   |||||||| || |||| ||||||||||||||| ||||||||||| | | |||| | |    
T  2613425 aagagtatttctaattacaccctgtttaatcttggttgcatttcaaaatgataaaattatcctttcataaaatttaattttcaaaaaacatcttcctttt 2613326  T
Q  326 tttttggttacaccccaaaa 345  Q
    || |||||||||||| ||||    
T  2613325 ttcttggttacaccctaaaa 2613306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 505
Target Start/End: Original strand, 1774218 - 1774292
Alignment:
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgg 505  Q
    |||||||||||||||| |||| |||| ||||||| |||   |||||||||||||||| |||||| ||||| ||||    
T  1774218 gatttcaaagaaaatttgaagcaaataaggttaggaagctatgttcttcaatcgattatgttttacttgtcatgg 1774292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 52343124 - 52343208
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||| ||||  ||| |||||||||| ||||||||||||| | |||| | ||| |||||||||||| |||| || |||||    
T  52343124 aaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccatcttc 52343208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 549
Target Start/End: Complemental strand, 4044523 - 4044492
Alignment:
Q  518 gattttgtgttttccttgttctgcgattcaca 549  Q
    ||||||||||||||||||||||||||||||||    
T  4044523 gattttgtgttttccttgttctgcgattcaca 4044492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 8947927 - 8947833
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttctt 353  Q
    ||||| ||| || ||||||||| |||| | ||||||| | ||||||||||||||||||| |||| ||||  || ||||||||| ||||||| ||||    
T  8947927 tggttacactccgaaatgacaaaattatc-tttcatatagtttgattttcaaaaagcctcttccttcttcctttgttacaccctaaaacccctctt 8947833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 545
Target Start/End: Complemental strand, 7156536 - 7156488
Alignment:
Q  499 gttatggattctcagttttg--attttgtgttttccttgttctgcgatt 545  Q
    ||||||| ||||||||| ||  |||||||||||||||||||||||||||    
T  7156536 gttatgggttctcagttctgcgattttgtgttttccttgttctgcgatt 7156488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 338
Target Start/End: Original strand, 52812168 - 52812237
Alignment:
Q  269 caaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacac 338  Q
    ||||||||||| ||||  ||| |||||||||| ||||||||||||| | |||| | ||| ||||||||||    
T  52812168 caaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 52812237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 354
Target Start/End: Original strand, 41588920 - 41589001
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||||| || ||||| |||||||||||||| ||||| ||||||||| |||| | ||| | |||||||||||||||||| |||||    
T  41588920 aaaatgataaaattactctttcataaaattt-atttt-aaaaagcctcttcctt-tttctcggttacaccccaaaacccctcttc 41589001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 225 - 550
Target Start/End: Original strand, 3872 - 4197
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3872 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 3971  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  3972 ttttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 4071  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  4072 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttg 4171  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||    
T  4172 tgttttccttgttctgcgattcacag 4197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 293; Significance: 1e-164; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 26015948 - 26015624
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  26015948 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 26015849  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  26015848 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcacgtcca 26015749  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26015748 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 26015649  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  26015648 gttttccttgttctgcgattcacag 26015624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 46322126 - 46321804
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46322126 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 46322027  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  46322026 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 46321927  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||    
T  46321926 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttgaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 46321827  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  46321826 tttccttgttctgcgattcacag 46321804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 47066020 - 47065698
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47066020 gagtttttctacttgcaccctacttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 47065921  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  47065920 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 47065821  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  47065820 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 47065721  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  47065720 tttccttgttctgcgattcacag 47065698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 43247039 - 43246715
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43247039 aagagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 43246940  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  43246939 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 43246840  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  43246839 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgattttgt 43246740  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  43246739 gttttccttgttctgcgattcacag 43246715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 228 - 547
Target Start/End: Complemental strand, 32542263 - 32541944
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32542263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 32542164  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||||||    
T  32542163 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttttcacgtccatt 32542064  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  32542063 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 32541964  T
Q  528 tttccttgttctgcgattca 547  Q
    ||||||||||||||||||||    
T  32541963 tttccttgttctgcgattca 32541944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 46923877 - 46924199
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46923877 agagtttttctacttgcaccatagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 46923976  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  46923977 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 46924076  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  46924077 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgattttgtg 46924175  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  46924176 ttttccttgttctgcgattcacag 46924199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 7900433 - 7900755
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    |||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7900433 gagtttttttacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 7900532  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7900533 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 7900632  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  7900633 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 7900732  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  7900733 tttccttgttctgcgattcacag 7900755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 8215998 - 8215676
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  8215998 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 8215899  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  8215898 tttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 8215799  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  8215798 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 8215699  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  8215698 tttccttgttctgcgattcacag 8215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 224 - 550
Target Start/End: Original strand, 34591672 - 34591998
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  34591672 ttaagagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattcctt 34591771  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34591772 ttttttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtc 34591871  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| || |||||||    
T  34591872 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctcaattctgatttt 34591971  T
Q  524 gtgttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||||    
T  34591972 gtgttttccttgttctgcgattcacag 34591998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 40705592 - 40705271
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||    
T  40705592 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattgccctttcataaaatttgattttcaaaaagcctattccttcatt 40705493  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  40705492 tt-ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40705394  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  40705393 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttgtcttgttatgggttctcagttctgattttgtgt 40705294  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  40705293 tttccttgttctgcgattcacag 40705271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 40995186 - 40995509
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  40995186 agagtttttctacttgcaccctanttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattatcaaaaagcatattccttctt 40995285  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  40995286 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 40995385  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  40995386 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtg 40995485  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||| || |||||||||    
T  40995486 ttttccttgttatgtgattcacag 40995509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 27324954 - 27325277
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| | |||||||||| |||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  27324954 agagtttttctacttgcatcctagttaattatggttgcactccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattccttctt 27325053  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  27325054 ttttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 27325153  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  27325154 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtg 27325253  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||| ||||||||||    
T  27325254 ttttccttgttctacgattcacag 27325277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 226 - 540
Target Start/End: Complemental strand, 21279151 - 21278835
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||    
T  21279151 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattccttct 21279052  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  21279051 tttttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 21278952  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gatttt 523  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |  ||||||    
T  21278951 ttcatgatttcaaagaaaattcgaagcaaattaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcagttctgcgatttt 21278852  T
Q  524 gtgttttccttgttctg 540  Q
    |||||||| ||||||||    
T  21278851 gtgttttctttgttctg 21278835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 228 - 536
Target Start/End: Complemental strand, 8203521 - 8203211
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  8203521 gagtttttctacttgcaccttagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 8203422  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  8203421 tttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 8203322  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gattttgt 525  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||    
T  8203321 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgcgattttgt 8203222  T
Q  526 gttttccttgt 536  Q
    |||||||||||    
T  8203221 gttttccttgt 8203211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 224 - 488
Target Start/End: Complemental strand, 38876138 - 38875874
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  38876138 ttaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcctt 38876039  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38876038 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtc 38875939  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattg 488  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38875938 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 38875874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 228 - 540
Target Start/End: Original strand, 25876776 - 25877090
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||||    
T  25876776 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagcatattccttcttt 25876875  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25876876 cttggttacaccccaaaacccctcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 25876975  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gattttgt 525  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |  ||||||||    
T  25876976 catgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcagttctgcgattttgt 25877075  T
Q  526 gttttccttgttctg 540  Q
    |||||||||||||||    
T  25877076 gttttccttgttctg 25877090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 221 - 550
Target Start/End: Complemental strand, 40994900 - 40994571
Alignment:
Q  221 atgttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattc 320  Q
    |||||| ||||||||||||||  || |||||||||||||||||||||  ||||| || |||||| ||||| |||||||||||||||||||||| ||||||    
T  40994900 atgttacgagtttttctacttaaactctagttaatcatggttgcaccataaaataacgagattatccttttataaaatttgattttcaaaaagtctattc 40994801  T
Q  321 catcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcac 420  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  40994800 cttcttttttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcac 40994701  T
Q  421 gtccattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgat 520  Q
    || ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  40994700 gttcattcatgatttccaagaaaattcgaagcaaaccaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctcagttctgat 40994601  T
Q  521 tttgtgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||||||    
T  40994600 tttgtgttttccttgttctgcgattcacag 40994571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 228 - 540
Target Start/End: Complemental strand, 47779589 - 47779274
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  47779589 gagtttttctacttgcatcctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 47779490  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     |||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||    
T  47779489 cttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatattttctcacgtccatt 47779390  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgt-ttttcttgttatggattctcagtttt--gattttg 524  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |  |||||||    
T  47779389 tatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctcagttctgcgattttg 47779290  T
Q  525 tgttttccttgttctg 540  Q
    ||||||||||||||||    
T  47779289 tgttttccttgttctg 47779274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 228 - 504
Target Start/End: Original strand, 7790903 - 7791180
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  7790903 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaatgcctattccttcttt 7791002  T
Q  328 tttg-gttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |||  ||||||||||||||  | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  7791003 tttttgttacaccccaaaaatcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 7791102  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatg 504  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7791103 tcatgatttcaaagcaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatg 7791180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 228 - 485
Target Start/End: Complemental strand, 38283671 - 38283414
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  38283671 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 38283572  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  38283571 cttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 38283472  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcga 485  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38283471 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 38283414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 225 - 547
Target Start/End: Complemental strand, 32662451 - 32662150
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||    
T  32662451 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagtctattccttc 32662352  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||                     ||||||||||||||||||||||||||||||||||    
T  32662351 ttttttggttacaccccaaaacccttcttccaaaaccataattct---------------------gcgaagattttcaaaaccatactttctcacgtcc 32662273  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||| ||||||||    
T  32662272 attcatgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcaattgtgtttttcctgttatgggttctcagttctgattttg 32662173  T
Q  525 tgttttccttgttctgcgattca 547  Q
    |||||||||||||||||||||||    
T  32662172 tgttttccttgttctgcgattca 32662150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 441 - 550
Target Start/End: Original strand, 35924318 - 35924427
Alignment:
Q  441 aaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgttttccttgttctg 540  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  35924318 aaaattcgaaacaaatcaggttagcaagtgttgttcttcaatcgattgcgtttttcttgttatgggttctcagttctgattttgtgttttccttgttctg 35924417  T
Q  541 cgattcacag 550  Q
    ||||||||||    
T  35924418 cgattcacag 35924427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 35924229 - 35924317
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 315  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35924229 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcc 35924317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 42095854 - 42095782
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42095854 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 42095782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 39074438 - 39074364
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39074438 aagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaattt 39074364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 43047167 - 43047094
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43047167 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaattt 43047094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 21874715 - 21874639
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  21874715 ttaagagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattattctttcataaaattt 21874639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 225 - 345
Target Start/End: Original strand, 43775880 - 43776000
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||| ||  | |||| |||||| ||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||| | |||| |     
T  43775880 taagagtttttctaattacatcctatttaatcctggttgcaccccaaaatgataaaattatcctttcataaaatttaattttcaaaaagcatcttccttt 43775979  T
Q  325 ttttttggttacaccccaaaa 345  Q
    ||| |||||||||||| ||||    
T  43775980 tttcttggttacaccctaaaa 43776000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 24980853 - 24980972
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| ||  |||||  |||||| ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||||||| | |||| | |    
T  24980853 aagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttcctttt 24980952  T
Q  326 tttttggttacaccccaaaa 345  Q
    || |||||||||||| ||||    
T  24980953 ttcttggttacaccctaaaa 24980972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 40862357 - 40862476
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| || || |||  |||||| || |||||||| |||||||||| |||| ||||||||||||||| ||||||||||||| | |||| | |    
T  40862357 aagagtttttctaattatatcctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttcctttt 40862456  T
Q  326 tttttggttacaccccaaaa 345  Q
    || |||||||||||| ||||    
T  40862457 ttcttggttacaccctaaaa 40862476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 19021089 - 19021023
Alignment:
Q  281 attaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacc 347  Q
    ||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||    
T  19021089 attaccctttcataaaatttgattttcaaaaagtctcttccttattttttggttacaccccaaaacc 19021023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 228 - 354
Target Start/End: Complemental strand, 42436588 - 42436462
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    |||||||| || || ||||||  |||||| ||| |||||||||||||||||||||||||||| ||||||||||  |||||||||||| | |||  | |||    
T  42436588 gagtttttataattataccctgtttaatcctggctgcaccccaaaatgacaagattacccttccataaaatttagttttcaaaaagcatcttcatttttt 42436489  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  42436488 cttggttacaccctaaaatccctcttc 42436462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 39597930 - 39597841
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccc 340  Q
    |||||| |||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||||| | |||| | ||| ||||||||||||    
T  39597930 ttaatcctggttgcaccccaaaatgacaaaattatcctgtcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccc 39597841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 20492682 - 20492809
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    |||||||||| || ||  |||||  |||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||| |||||| | |||| | |    
T  20492682 aagagtttttataattacaccctgattaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttc-aaaagcatcttcctttt 20492780  T
Q  326 tttttggttacaccccaaaacccttcttc 354  Q
    || |||||||||||| |||| || |||||    
T  20492781 ttcttggttacaccctaaaatccctcttc 20492809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 340
Target Start/End: Complemental strand, 12847258 - 12847146
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| ||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||||| | || | | |||    
T  12847258 gagtttttctaattacaccctgtttaatcctggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatctttctttttt 12847159  T
Q  328 tttggttacaccc 340  Q
     ||||||||||||    
T  12847158 cttggttacaccc 12847146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 354
Target Start/End: Complemental strand, 30173548 - 30173420
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| || ||||||| |||||| ||||||||   ||||||||||| |||||| ||  ||||||||| ||||||||||| | | |||| | |    
T  30173548 aagagtttttctaattataccctatttaatcttggttgcatttcaaaatgacaaaattacctttctataaaatttaattttcaaaaaacatcttcctttt 30173449  T
Q  326 tttttggttacaccccaaaacccttcttc 354  Q
    ||||| ||||||||| |||| || |||||    
T  30173448 ttttttgttacaccctaaaatccctcttc 30173420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 45870223 - 45870127
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||| ||||||||||| |||| |||| |||||||||| ||||||||||||| | |||| | ||| |||||||||||| |||| || |||||    
T  45870223 tggttgcacctcaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 45870127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 10594083 - 10594201
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| ||||||||||||||||| |||  |||| |||| |||||||||| ||||| ||||||| | |||| | ||    
T  10594083 agagtttttctaattacaccctgtttaatcctggttgcaccccaaaataacagaattaaccttccataaaatttaatttttaaaaagcatcttccttttt 10594182  T
Q  327 ttttggttacaccccaaaa 345  Q
    | |||||||||||| ||||    
T  10594183 tcttggttacaccctaaaa 10594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 7883737 - 7883634
Alignment:
Q  251 ttaatcatggttgcacccc-aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccct 349  Q
    |||||| |||||||||||| ||||||| || ||||||||||||||||| || ||||||||||||| | |||| | ||| |||| ||||||| |||| ||     
T  7883737 ttaatcctggttgcacccccaaaatgaaaaaattaccctttcataaaa-ttaattttcaaaaagcatcttccttttttcttgggtacaccctaaaatccc 7883639  T
Q  350 tcttc 354  Q
    |||||    
T  7883638 tcttc 7883634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 40305527 - 40305431
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||||||||  |||||||||| |||||||||||| ||||||| |||||||||| || | | || | ||| |||||||||||| |||| || |||||    
T  40305527 tggttgcacctaaaaatgacaaaattaccctttcaaaaaatttaattttcaaaatgcatctgccttttttcttggttacaccctaaaatccctcttc 40305431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 431 - 503
Target Start/End: Original strand, 48642094 - 48642166
Alignment:
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttat 503  Q
    ||||||||||||||||||||| |  | ||||||| ||||  |||||||||||||||| | |||||||||||||    
T  48642094 gatttcaaagaaaattcgaagcatgtgaggttagtaagttgtgttcttcaatcgattatatttttcttgttat 48642166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 19687096 - 19687135
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcacc 267  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  19687096 gagtttttctacttgcaccctagttaatcatggttgcacc 19687135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 36688820 - 36688694
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| | |||||| | ||||||||||| |||| |||| ||||||| || ||||||||||||| | |||| | ||    
T  36688820 agagtttttctaattacaccctctttaatccttgttgcatctcaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagcatcttccttttt 36688722  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    | |||||||||||| |||| || |||||    
T  36688721 tcttggttacaccctaaaatccctcttc 36688694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 25765044 - 25765110
Alignment:
Q  429 atgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 495  Q
    ||||||||||||||||||||||| | || ||||||||| ||  |||||||||||||| | |||||||    
T  25765044 atgatttcaaagaaaattcgaagcagataaggttagcatgttgtgttcttcaatcgactatgttttt 25765110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 44709980 - 44709894
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    ||||||||||| || ||||||| |||||| |||||| | |  ||||||| || |||| ||||| ||||||||| |||||||||||||    
T  44709980 gagtttttctaattataccctatttaatcctggttgtatcataaaatgataaaattatccttttataaaatttaattttcaaaaagc 44709894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 241705 - 241792
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacacc 339  Q
    ||||||||| |||||||  ||||||| || ||||||||| |||||||||  ||||||||||||| | |||| | ||| |||||||||||    
T  241705 ttaatcatgcttgcaccttaaaatgataaaattacccttccataaaatta-attttcaaaaagcatcttccttttttcttggttacacc 241792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 29042167 - 29042269
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| | |||||||| ||||||||||| |||| |||||||||||| || |||||||| |||| | |||  | ||| |||||||||||| |||| || |    
T  29042167 ttaatcctagttgcacctcaaaatgacaaaattatcctttcataaaa-ttaattttcaacaagcatcttcattttttcttggttacaccctaaaatccct 29042265  T
Q  351 cttc 354  Q
    ||||    
T  29042266 cttc 29042269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 25764898 - 25764946
Alignment:
Q  252 taatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||| ||||| |||| ||||||||||| ||||||||| ||||||||||    
T  25764898 taatcctggttacacctcaaaatgacaaaattacccttgcataaaattt 25764946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 25853517 - 25853195
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25853517 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 25853418  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  25853417 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccatt 25853318  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  25853317 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 25853218  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  25853217 tttccttgttctgcgattcacag 25853195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 44143360 - 44143682
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44143360 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 44143459  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  44143460 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtccatt 44143559  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  44143560 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 44143659  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  44143660 tttccttgttctgcgattcacag 44143682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 45505872 - 45505548
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  45505872 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttaattttcaaaaagcctattccttct 45505773  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  45505772 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcacgtcca 45505673  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  45505672 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 45505573  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  45505572 gttttccttgttctgcgattcacag 45505548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 1481811 - 1482133
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1481811 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 1481910  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  1481911 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctcacgtccatt 1482010  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1482011 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 1482110  T
Q  528 tttccttgttctgcgattcacag 550  Q
    ||||||| |||||||||||||||    
T  1482111 tttccttattctgcgattcacag 1482133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 1520176 - 1520498
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1520176 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 1520275  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  1520276 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 1520375  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  1520376 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctcagttctgattttgtgt 1520475  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  1520476 tttccttgttctgcgattcacag 1520498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 226 - 550
Target Start/End: Original strand, 34202277 - 34202601
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  34202277 aagagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 34202376  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||| |||||||||||||    
T  34202377 tttttggttacaccccaaaacccttcttcaaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatattttctcacgtcca 34202476  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  34202477 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 34202576  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  34202577 gttttccttgttctgcgattcacag 34202601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 227 - 549
Target Start/End: Original strand, 3178225 - 3178546
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3178225 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttctt 3178324  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3178325 ttttggttacaccccaaaacccttcttccaaagccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 3178424  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3178425 tcatgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtgtttttcttgttatgg-ttctcagttttgattttgtg 3178523  T
Q  527 ttttccttgttctgcgattcaca 549  Q
    |||||||| ||||||||||||||    
T  3178524 ttttccttattctgcgattcaca 3178546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 228 - 546
Target Start/End: Complemental strand, 39697862 - 39697544
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  39697862 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttcttt 39697763  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  39697762 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 39697663  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |    
T  39697662 catgatttcaaagaaaattagaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtat 39697563  T
Q  528 tttccttgttctgcgattc 546  Q
    |||||||||||||||||||    
T  39697562 tttccttgttctgcgattc 39697544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 224 - 545
Target Start/End: Original strand, 42342964 - 42343284
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |    
T  42342964 ttaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcctattcctt 42343063  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  42343064 cttttttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtc 42343163  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  42343164 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgatttt 42343262  T
Q  524 gtgttttccttgttctgcgatt 545  Q
    ||||||||||||||||||||||    
T  42343263 gtgttttccttgttctgcgatt 42343284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 231 - 545
Target Start/End: Complemental strand, 2390768 - 2390455
Alignment:
Q  231 tttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttttt 330  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  2390768 tttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctttttt 2390669  T
Q  331 ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcat 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2390668 ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 2390569  T
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgtttt 530  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  2390568 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgattttgtgtttt 2390470  T
Q  531 ccttgttctgcgatt 545  Q
    |||||||||||||||    
T  2390469 ccttgttctgcgatt 2390455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 227 - 545
Target Start/End: Original strand, 21657926 - 21658243
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  21657926 agagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 21658025  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  21658026 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaactatactttctcacgtccat 21658125  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  21658126 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgattttgtg 21658224  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||||||||||||||||||    
T  21658225 ttttccttgttctgcgatt 21658243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 40811857 - 40811536
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  40811857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgaaaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 40811758  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  40811757 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatagattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40811658  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  40811657 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgattttgtgt 40811559  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  40811558 tttccttgttctgcgattcacag 40811536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 13196222 - 13195901
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13196222 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 13196123  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||    
T  13196122 tgtggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctatt 13196023  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||    
T  13196022 catgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgagttctcagttctgattttgtgt 13195924  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||| ||||||||||||    
T  13195923 tttccttgttttgcgattcacag 13195901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 225 - 550
Target Start/End: Original strand, 37094085 - 37094410
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| || |||||||||||||||||||  ||||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||    
T  37094085 taagagtttttctacttgcactctagttaatcatggttgcataccaaaatgataagattatcttttcataaaatttgattttcaaaaagcctattccttc 37094184  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  37094185 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtcc 37094284  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  37094285 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctcagttctgattttg 37094384  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||    
T  37094385 tgttttccttgttctgcgattcacag 37094410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 244 - 514
Target Start/End: Original strand, 43577019 - 43577289
Alignment:
Q  244 accctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaa 343  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43577019 accctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaa 43577118  T
Q  344 aacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaa 443  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43577119 aacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaa 43577218  T
Q  444 attcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagt 514  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  43577219 attcgaagcaaatcaggttagcaagtgttgttcttgaatcgattgtgtttttcttgttatgggttctcagt 43577289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 226 - 540
Target Start/End: Original strand, 10638776 - 10639091
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  10638776 aagagtttttctacctgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttct 10638875  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    || |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  10638876 ttcttggttacaccccaaacccct-cttccaaaaccataattctccaatcgatcgattctgttatgcgaagattttcaaaaccatactttctcacgtcca 10638974  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gatttt 523  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||| |  ||||||    
T  10638975 ttcatggttttaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttcttatgggttctcagttctgcgatttt 10639074  T
Q  524 gtgttttccttgttctg 540  Q
    |||||||||||||||||    
T  10639075 gtgttttccttgttctg 10639091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 226 - 550
Target Start/End: Original strand, 927062 - 927366
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  927062 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 927161  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||      |||||||||              |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  927162 ttt------acaccccaa--------------aaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 927241  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  927242 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 927341  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  927342 gttttccttgttctgcgattcacag 927366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 226 - 411
Target Start/End: Original strand, 15011817 - 15012002
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15011817 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 15011916  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccata 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  15011917 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccata 15012002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 297 - 550
Target Start/End: Original strand, 874953 - 875195
Alignment:
Q  297 atttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaag 396  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| || ||||| ||||||     
T  874953 atttgattttcaaaaagcctattccttatttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcaatcgatcgtgttctgcgaa- 875051  T
Q  397 attttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttc 496  Q
                ||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  875052 ------------atactctctcacgtccattcacgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttc 875139  T
Q  497 ttgttatggattctcagt--tttgattttgtgttttccttgttctgcgattcacag 550  Q
    ||||||||| ||||||||  | ||||||||||||||||||||||||||||||||||    
T  875140 ttgttatgggttctcagttctgtgattttgtgttttccttgttctgcgattcacag 875195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 32551753 - 32551681
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 299  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32551753 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 32551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 35895492 - 35895563
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 299  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35895492 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatt 35895563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 4331967 - 4331840
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||||| || |||||||||| |||||||||||||||||||| |||||||||||| |  |||| | ||    
T  4331967 agagtttttctaattacaccctctttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagacacttccttttt 4331868  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    | |||||||||||| |||| || |||||    
T  4331867 tcttggttacaccctaaaatccctcttc 4331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 224 - 354
Target Start/End: Complemental strand, 13480638 - 13480508
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  ||| |  |||||| || |||||||  |||||||||| |||||||||||||||||||| ||||||||||||| | |||| |    
T  13480638 ttaagagtttttctaattacaccatgtttaatcctgattgcaccttaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcattttcctt 13480539  T
Q  324 cttttttggttacaccccaaaacccttcttc 354  Q
     ||| |||||||||||| |||| || |||||    
T  13480538 ttttcttggttacaccctaaaatccctcttc 13480508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 26170975 - 26171062
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||||||||| ||  |||||  |||||| ||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||||    
T  26170975 agagtttttctaattacaccctgtttaatcttggttgcaccccaaaataacaaaattacccttccataaaatttaattttcaaaaagc 26171062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 354
Target Start/End: Complemental strand, 38629494 - 38629368
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| |||||||| || ||||||| || |||| ||||||||||||||| |||||||||||| || |||| | |||    
T  38629494 gagtttttctaattacaccctctttaatcctggttgcatcctaaaatgataaaattatcctttcataaaatttaattttcaaaaagactcttcctttttt 38629395  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  38629394 cttggttacaccctaaaatccctcttc 38629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 353
Target Start/End: Complemental strand, 45443617 - 45443516
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| || || |||| |||||||| || |||||||||||||||||||| ||||||||||||||| || ||| ||| | |||||||||||||||||| |    
T  45443617 ttaatcctgattacacctcaaaatgataaaattaccctttcataaaatttaattttcaaaaagcctctt-catttttctcggttacaccccaaaacccct 45443519  T
Q  351 ctt 353  Q
    |||    
T  45443518 ctt 45443516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 226 - 345
Target Start/End: Complemental strand, 7722760 - 7722641
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| ||  |||||  |||||  |||||||||| |||||||| || ||||||||| |||||||||| |||| |||||||| | |||| | |    
T  7722760 aagagtttttctaattacaccctgtttaattctggttgcacctcaaaatgataaaattacccttccataaaatttaatttacaaaaagcatcttcctttt 7722661  T
Q  326 tttttggttacaccccaaaa 345  Q
    || |||||||||||| ||||    
T  7722660 ttcttggttacaccctaaaa 7722641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 44456867 - 44456780
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||||| || ||||||| || |||||||||||||||||||| ||||||||||||| | |||| | ||| |||||||||||| ||||    
T  44456867 tggttgcatcctaaaatgataaaattaccctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 44456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 27980978 - 27980924
Alignment:
Q  246 cctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  27980978 cctacttaatcatggttacaccccaaaatgacaagattatcctttcataaaattt 27980924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 28067508 - 28067454
Alignment:
Q  246 cctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  28067508 cctacttaatcatggttacaccccaaaatgacaagattatcctttcataaaattt 28067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 353
Target Start/End: Original strand, 44798832 - 44798933
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||| |||  ||||||||||| ||||| |||||||||||||| | ||||||||||||| |||| | ||| | |||||||||||||||||| |    
T  44798832 ttaatcctggttacacttcaaaatgacaaaattactctttcataaaatttaagtttcaaaaagcctcttcc-tttttctcggttacaccccaaaacccct 44798930  T
Q  351 ctt 353  Q
    |||    
T  44798931 ctt 44798933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 224 - 345
Target Start/End: Complemental strand, 458698 - 458577
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  || ||  |||||| |||||||| || ||||||| || |||| | ||  ||||||||| ||||||||||||| | |||| |    
T  458698 ttaagagtttttctaattacactctgtttaatcctggttgcatcctaaaatgataaaattatcattctataaaatttaattttcaaaaagcatcttcctt 458599  T
Q  324 cttttttggttacaccccaaaa 345  Q
     ||| |||||||||||| ||||    
T  458598 ttttcttggttacaccctaaaa 458577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 337
Target Start/End: Complemental strand, 31569708 - 31569635
Alignment:
Q  264 caccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttaca 337  Q
    ||||| |||||||||| |||| |||| |||||||||| ||||||||||||| | |||| | ||| |||||||||    
T  31569708 caccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttaca 31569635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 10554807 - 10554733
Alignment:
Q  269 caaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaa 344  Q
    |||||||| || ||||| |||| ||||||||| ||||||||||||||| |||| | ||| ||||||||||| ||||    
T  10554807 caaaatgataaaattactcttttataaaatttaattttcaaaaagcctcttcc-tttttcttggttacacctcaaa 10554733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 52024724 - 52025047
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  52024724 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaggattaccctttcataaaatttgattttcaaaaagcctattccttctt 52024823  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  52024824 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcatgtccat 52024923  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  52024924 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtg 52025023  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  52025024 ttttccttgttctgcgattcacag 52025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 34270857 - 34270535
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  34270857 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 34270758  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||    
T  34270757 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccatt 34270658  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  34270657 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 34270558  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  34270557 tttccttgttctgcgattcacag 34270535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 227 - 545
Target Start/End: Complemental strand, 52044474 - 52044156
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  52044474 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttctt 52044375  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  52044374 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 52044275  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  52044274 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtg 52044175  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||||||||||||||||||    
T  52044174 ttttccttgttctgcgatt 52044156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 228 - 545
Target Start/End: Complemental strand, 39569539 - 39569222
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39569539 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 39569440  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||    
T  39569439 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatcgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 39569340  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  39569339 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 39569240  T
Q  528 tttccttgttctgcgatt 545  Q
    ||||||||||||||||||    
T  39569239 tttccttgttctgcgatt 39569222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 44721871 - 44722193
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44721871 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 44721970  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  44721971 tttggttacaccccaaaacccttcttccaaaaccataattctctaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 44722070  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  44722071 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 44722170  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||| ||||||||||||    
T  44722171 tttccttgttttgcgattcacag 44722193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 226 - 550
Target Start/End: Original strand, 42948187 - 42948512
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42948187 aagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 42948286  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  42948287 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 42948386  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttc-aatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  42948387 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaaatcgattgtgtttttcttgttatgggttctcagttctgattttg 42948486  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||| ||||||||||||||||||    
T  42948487 tgttttcattgttctgcgattcacag 42948512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 222 - 550
Target Start/End: Complemental strand, 26151255 - 26150927
Alignment:
Q  222 tgttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcc 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||    
T  26151255 tgttaagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattatcctttcataaaatttgattttcaaaaagcatattcc 26151156  T
Q  322 atcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacg 421  Q
     |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  26151155 ttcttttttggttacaccctaaaactcttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacg 26151056  T
Q  422 tccattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatt 521  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  26151055 tccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgatt 26150956  T
Q  522 ttgtgttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||||||    
T  26150955 ttgtgttttccttgttctgcgattcacag 26150927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 24317180 - 24317501
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24317180 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 24317279  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  24317280 ttttggttacaccccaaaacccttcttcc-aaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 24317378  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||||||||    
T  24317379 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattatg-ttttcttgttatgggttctcagttctgattttgtg 24317477  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  24317478 ttttccttgttctgcgattcacag 24317501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 228 - 545
Target Start/End: Original strand, 18909215 - 18909532
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||  ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||    
T  18909215 gagtttttctacttacaccctagttaatcatggttgcattccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattctttcttt 18909314  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  18909315 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctcacgtccatt 18909414  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18909415 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttttgattttgtgt 18909514  T
Q  528 tttccttgttctgcgatt 545  Q
    ||||||||||||||||||    
T  18909515 tttccttgttctgcgatt 18909532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 50727796 - 50728119
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||    
T  50727796 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttttt 50727895  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  50727896 tttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccat 50727995  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| ||||||||||    
T  50727996 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaattgattgtgtttttcttgttgtgggttctcagttctgattttgtg 50728095  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    |||||||| |||||||||||||||    
T  50728096 ttttccttattctgcgattcacag 50728119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 228 - 532
Target Start/End: Original strand, 6653224 - 6653528
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  6653224 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgactttcaaaaagcctattccttcttt 6653323  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  6653324 tttggttacaccccaaaactcttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 6653423  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  6653424 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 6653523  T
Q  528 tttcc 532  Q
    |||||    
T  6653524 tttcc 6653528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 2138329 - 2138007
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  2138329 gagtttttctacttgcactctagttaatcatggttgcacctcaaaatgataagattaccctttcataaaatttgattttcaaaaaacctattccttcttt 2138230  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  2138229 tttggttacaccccaaaacccttcttccaaaactataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 2138130  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2138129 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 2138030  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  2138029 tttccttgttctgcgattcacag 2138007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 225 - 550
Target Start/End: Complemental strand, 51677335 - 51677010
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| ||||||||||||||| ||||||  | ||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||    
T  51677335 taagagtttttctacttgcaccctagttaatcatagttgcattctaaaatgacaagattatcctttcataaaatttgatttacaaaaagcctattccttc 51677236  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  51677235 ttttttggttacaccccaaaactcttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcc 51677136  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  51677135 attcatgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttg 51677036  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||    
T  51677035 tgttttccttgttctgcgattcacag 51677010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 228 - 545
Target Start/End: Complemental strand, 2482716 - 2482396
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  2482716 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcctattccttcttt 2482617  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcac----gtc 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||    |||    
T  2482616 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccgtc 2482517  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  2482516 cattcatgatttcaaag-aaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgatttt 2482418  T
Q  524 gtgttttccttgttctgcgatt 545  Q
    ||||||||||||||||||||||    
T  2482417 gtgttttccttgttctgcgatt 2482396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 227 - 545
Target Start/End: Original strand, 13942142 - 13942460
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  13942142 agagtttttctacttgcaccctatttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttctt 13942241  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  13942242 ttttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgtttttcgaagattttcaaaaccatactttctcacgtccat 13942341  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  13942342 tcatgatttcaaagaaaatttaaagcaaatcaggttagcaagtgttgttcttcactcgattgtgtttttcttattatgggttctcagttctgattttgtg 13942441  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||| ||||||||||||||    
T  13942442 tttttcttgttctgcgatt 13942460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 225 - 495
Target Start/End: Complemental strand, 33010873 - 33010603
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33010873 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttc 33010774  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33010773 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 33010674  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 495  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33010673 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 33010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 233 - 550
Target Start/End: Original strand, 20581504 - 20581822
Alignment:
Q  233 tttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttgg 332  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20581504 tttctacttgcaccctagttaatcatggttgcaccccaaaatgacaaaattaccctttcataaaatttgattttcaaaaagcctattccttcttttttgg 20581603  T
Q  333 ttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcatga 432  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  20581604 ttacaccc-aaaacccctcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccattcatga 20581702  T
Q  433 tttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gattttgtgtttt 530  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||    
T  20581703 tttcaaagaaaattcgaagcaaattatgttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgcgattttgtgtttt 20581802  T
Q  531 ccttgttctgcgattcacag 550  Q
    |||||||||| |||||||||    
T  20581803 ccttgttctgtgattcacag 20581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 228 - 501
Target Start/End: Original strand, 40400033 - 40400306
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  40400033 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 40400132  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     ||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  40400133 cttggttacatcccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 40400232  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtt 501  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40400233 caggatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttccttgtt 40400306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 226 - 475
Target Start/End: Original strand, 15932784 - 15933033
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  15932784 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttct 15932883  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||    
T  15932884 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtcca 15932983  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgtt 475  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15932984 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgtt 15933033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 227 - 472
Target Start/End: Original strand, 49823203 - 49823448
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  49823203 agagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattacccttttataaaatttgattttcaaaaagcctattccttctt 49823302  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||    
T  49823303 ttttggttacaccccaaaacccttcttccgaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccat 49823402  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgtt 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  49823403 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgtt 49823448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 226 - 440
Target Start/End: Complemental strand, 28853005 - 28852791
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28853005 aagagtttttctacttgcatcctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 28852906  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  28852905 tttttggttacaccccaaaacccttcttccaaaactataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 28852806  T
Q  426 ttcatgatttcaaag 440  Q
    |||||||||||||||    
T  28852805 ttcatgatttcaaag 28852791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 13240304 - 13240210
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcc 321  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  13240304 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaagagtctattcc 13240210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 14247532 - 14247457
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14247532 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 14247457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 51290548 - 51290621
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51290548 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 51290621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 11173584 - 11173512
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11173584 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 11173512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 39982263 - 39982335
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39982263 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 39982335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 40536873 - 40536800
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40536873 agagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaattt 40536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 224 - 345
Target Start/End: Original strand, 40498613 - 40498734
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  |||||  |||||  |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | |||| |    
T  40498613 ttaagagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacaaaattaccctttcataaaatttaattttcaaaaagcatcttcctt 40498712  T
Q  324 cttttttggttacaccccaaaa 345  Q
     ||| |||||||||||| ||||    
T  40498713 ttttcttggttacaccctaaaa 40498734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 228 - 354
Target Start/End: Complemental strand, 29922309 - 29922183
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| || |||| | |||    
T  29922309 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttcctttttt 29922210  T
Q  328 tttggttacaccccaaaacccttcttc 354  Q
     |||||||||||| |||| || |||||    
T  29922209 cttggttacaccctaaaatccctcttc 29922183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 226 - 345
Target Start/End: Complemental strand, 51002118 - 51001999
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| || ||||||  |||||| || |||||||| |||||||||| |||| ||||||||||||||| ||||||||||||| | |||| | |    
T  51002118 aagagtttttctaattataccctgtttaatcctgattgcaccctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagcatcttcctttt 51002019  T
Q  326 tttttggttacaccccaaaa 345  Q
    || |||||||||||| ||||    
T  51002018 ttcttggttacaccctaaaa 51001999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 51776028 - 51776155
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||||||| | |||| | ||    
T  51776028 agagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttccttttt 51776127  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    | |||||||||||| |||| || |||||    
T  51776128 tcttggttacaccctaaaatccctcttc 51776155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 354
Target Start/End: Original strand, 26307843 - 26307972
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||| ||  |||||  |||||| ||||||||||  |||||||||| |||| |||| |||||||||| ||||||||||||| | |||| |     
T  26307843 taagagtttttctaattacaccctgtttaatcttggttgcaccttaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttt 26307942  T
Q  325 ttttttggttacaccccaaaacccttcttc 354  Q
    ||| |||||||||||| |||| || |||||    
T  26307943 tttcttggttacaccctaaaatccatcttc 26307972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 17605725 - 17605853
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| ||  |||||   ||||| ||||||||||| |||||||||| |||||| || |||||||||| ||||||||||||| | |||| | |    
T  17605725 aagagtttttctaattacaccctgtgtaatcctggttgcaccctaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatcttcctttt 17605824  T
Q  326 tttttggttacaccccaaaacccttcttc 354  Q
    || |||||||||||| |||| || |||||    
T  17605825 ttcttggttacaccctaaaatccctcttc 17605853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 41712783 - 41712877
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||||||||||||||||||  |||| |||| |||||||||| ||||||||||||| | |||| | ||| |||||||||||| ||||    
T  41712783 ttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 41712877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 7009006 - 7009131
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| |   |||||  |||||| ||||| ||||||||||| |||| |||||||||||||||||||| ||||| ||||||||| |||| ||     
T  7009006 aagagtttttctaatcacaccctgtttaatcctggttacaccccaaaataacaaaattaccctttcataaaatttaatttt-aaaaagcctcttccttc- 7009103  T
Q  326 tttttggttacaccccaaaacccttcttc 354  Q
     |||| | ||||||||||||||| |||||    
T  7009104 -ttttcggtacaccccaaaacccctcttc 7009131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 23444412 - 23444312
Alignment:
Q  244 accctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaa 343  Q
    |||||| |||||| ||||||||||||| |||||||| |||| ||||||||||||||| |||||| |||||| | |||| | ||| |||||||||||| ||    
T  23444412 accctatttaatcttggttgcaccccacaatgacaaaattatcctttcataaaatttaattttc-aaaagcatcttccttttttcttggttacaccctaa 23444314  T
Q  344 aa 345  Q
    ||    
T  23444313 aa 23444312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 345
Target Start/End: Complemental strand, 9640979 - 9640859
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||| ||  |||||  | |||| |||||||| || |||||||||| |||||||||| ||||||||| ||||||||||||| | |||  |     
T  9640979 taagagtttttctaattacacccttttcaatcctggttgcatcctaaaatgacaaaattacccttttataaaatttaattttcaaaaagcatcttctttt 9640880  T
Q  325 ttttttggttacaccccaaaa 345  Q
    ||| |||||||||||| ||||    
T  9640879 tttcttggttacaccctaaaa 9640859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 14290355 - 14290252
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||||||||  |||||||||| ||||||||| |||||||||| ||||||||||||| | || | | ||| |||||||||||| |||| || |    
T  14290355 ttaatcctggttgcaccttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatctttcttttttcttggttacaccctaaaatccct 14290256  T
Q  351 cttc 354  Q
    ||||    
T  14290255 cttc 14290252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 32086480 - 32086599
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| ||  |||||  |||||| || ||||||||||||||||||  |||| |||| |||||||||| |||||||||| || | |||| | |    
T  32086480 aagagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaggcatcttcctttt 32086579  T
Q  326 tttttggttacaccccaaaa 345  Q
    || |||||||||||| ||||    
T  32086580 ttcttggttacaccctaaaa 32086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 338
Target Start/End: Original strand, 5672915 - 5673001
Alignment:
Q  252 taatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacac 338  Q
    ||||| |||||||| || |||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | ||| ||||||||||    
T  5672915 taatcctggttgcatcctaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 5673001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 17474687 - 17474781
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||||| || |||||||||| |||| ||||||||||||||| ||||||||||||  | |||| | ||| |||||||||||| ||||    
T  17474687 ttaatcctggttgcatcctaaaatgacaaaattatcctttcataaaatttaattttcaaaaagaatcttccttttttcttggttacaccctaaaa 17474781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 345
Target Start/End: Original strand, 13146022 - 13146138
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| ||||||||||| |||||||||| ||||| ||| ||||||| || ||||||||||||| | |||| | |||    
T  13146022 gagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattactcttccataaaa-ttaattttcaaaaagcatcttcctttttt 13146120  T
Q  328 tttggttacaccccaaaa 345  Q
     |||||||||||| ||||    
T  13146121 cttggttacaccctaaaa 13146138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 426 - 469
Target Start/End: Complemental strand, 13240209 - 13240166
Alignment:
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagt 469  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  13240209 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagt 13240166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 48933211 - 48933286
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 299  Q
    ||||||||||||||| ||  |||||  ||||||||||||||||| |||||||| || ||||||||| |||||||||    
T  48933211 ttaagagtttttctaattacaccctgattaatcatggttgcacctcaaaatgataaaattacccttccataaaatt 48933286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 8114966 - 8114872
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| ||||||||||| |||||||||| |||| |||| || ||||||| ||||||||||||| | |||  | ||| |||||||||||| ||||    
T  8114966 ttaatcctggttgcaccctaaaatgacaaaattatccttccagaaaatttaattttcaaaaagcatcttctttttttcttggttacaccctaaaa 8114872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 19247839 - 19247745
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||||| || ||||||| || ||||||||| |||||||||| ||||||||||||| | |||| | ||| ||| |||||||| ||||    
T  19247839 ttaatcctggttgcatcctaaaatgataaaattacccttccataaaattttattttcaaaaagcatcttccttttttcttgattacaccctaaaa 19247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 345
Target Start/End: Original strand, 12601893 - 12601970
Alignment:
Q  268 ccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||||||||| ||||  ||| |||||||||| ||||||||||||| | |||| | |||||||||||||||| ||||    
T  12601893 ccaaaatgacaaaattattcttccataaaatttaattttcaaaaagcatcttcctttttttttggttacaccctaaaa 12601970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 352
Target Start/End: Complemental strand, 19514220 - 19514097
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttt 328  Q
    |||||||||| ||  |||||  |||||| |||||||| |  ||||| |||| ||||| ||| |||||||||| ||||||||||||| | |||| | |||     
T  19514220 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttccttttttc 19514121  T
Q  329 ttggttacaccccaaaacccttct 352  Q
    |||||||||||  |||| ||||||    
T  19514120 ttggttacaccttaaaatccttct 19514097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 35273849 - 35273935
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttaca 337  Q
    |||||| |||||||| || |||||||||  |||| |||| |||||||||| ||||||||||||| | |||| | ||| |||||||||    
T  35273849 ttaatcctggttgcatcctaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttaca 35273935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 550
Target Start/End: Original strand, 13942525 - 13942557
Alignment:
Q  518 gattttgtgttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||||||||||    
T  13942525 gattttgtgttttccttgttctgcgattcacag 13942557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 346
Target Start/End: Original strand, 3485812 - 3485933
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaa-tttgattttcaaaaagcctattccat 323  Q
    ||||||||||| || ||  |||||  |||||| ||||| |||  |||||| |||| |||| ||||| |||||| ||| ||||||||||||||| |||| |    
T  3485812 taagagtttttttaattacaccctgtttaatcttggttacacttcaaaataacaaaattatccttttataaaaatttaattttcaaaaagcctcttcc-t 3485910  T
Q  324 cttttttggttacaccccaaaac 346  Q
     ||| | ||||||||||||||||    
T  3485911 ttttctcggttacaccccaaaac 3485933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 46291884 - 46291790
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||||| |  |||||||||| |||||   | |||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||    
T  46291884 ttaatcctggttgcatcttaaaatgacaaaattacttatccataaaatttaatttttaaaaagcatcttccatttttcttggttacaccctaaaa 46291790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 348
Target Start/End: Original strand, 35841475 - 35841572
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccc 348  Q
    |||||||| ||| || | |||||| |||| |||| |||| |||||||||| |||||||||||| || || | ||||  || |||||| ||||||||||    
T  35841475 ttaatcatagttacatctcaaaataacaaaattatccttccataaaatttaattttcaaaaagtctctttcttcttactttgttacaacccaaaaccc 35841572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 24527697 - 24527597
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| || |||||  |||||||| ||| |||||| ||||||||||||| ||||| ||||||| | |||| ||  || | ||||||||||||||||| |    
T  24527697 ttaatcctgattgcattccaaaatgccaaaattaccatttcataaaatttaatttt-aaaaagcatcttccttc--ttctcgttacaccccaaaacccct 24527601  T
Q  351 cttc 354  Q
    ||||    
T  24527600 cttc 24527597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 23357340 - 23357018
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  23357340 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccttttcataaaatttgattttcaaaaagcctattccttcttt 23357241  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  23357240 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcatt 23357141  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23357140 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 23357041  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  23357040 tttccttgttctgcgattcacag 23357018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 226 - 547
Target Start/End: Complemental strand, 26122611 - 26122290
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||    
T  26122611 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgataagattaccctttcataaaatttgattttcaaaaagcatattccttct 26122512  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  26122511 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccataatttctcacgtcca 26122412  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  26122411 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 26122312  T
Q  526 gttttccttgttctgcgattca 547  Q
    ||||||||||||||||||||||    
T  26122311 gttttccttgttctgcgattca 26122290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 231 - 550
Target Start/End: Original strand, 8376243 - 8376562
Alignment:
Q  231 tttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttttt 330  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  8376243 tttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctttttt 8376342  T
Q  331 ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcat 430  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8376343 ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcat 8376442  T
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgtttt 530  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  8376443 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgattttgtgtttt 8376542  T
Q  531 ccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||    
T  8376543 ccttgttctgcgattcacag 8376562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 24822807 - 24822485
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24822807 gagtttttctagttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 24822708  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||    
T  24822707 tttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccataatttctcacgtccatt 24822608  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  24822607 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctcagttctgattttgtgt 24822508  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  24822507 tttccttgttctgcgattcacag 24822485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 227 - 545
Target Start/End: Complemental strand, 26337475 - 26337157
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  26337475 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 26337376  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  26337375 ttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccat 26337276  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26337275 tcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatggattctcagttctgattttgtg 26337176  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||||||||||||||||||    
T  26337175 ttttccttgttctgcgatt 26337157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 227 - 547
Target Start/End: Original strand, 35605336 - 35605656
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35605336 agagtttttctacttacaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 35605435  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| ||||||    
T  35605436 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgctctgcgaagattttcaaaaccatactttctcatgtccat 35605535  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||    
T  35605536 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctcagttctgattttgtg 35605635  T
Q  527 ttttccttgttctgcgattca 547  Q
    |||||||||||||||||||||    
T  35605636 ttttccttgttctgcgattca 35605656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 230 - 550
Target Start/End: Original strand, 39365248 - 39365567
Alignment:
Q  230 gtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttt 329  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39365248 gtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttttt 39365347  T
Q  330 tggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattca 429  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39365348 tggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattca 39365447  T
Q  430 tgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgttt 529  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||| |||||||||||||    
T  39365448 tgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaattgactgtg-ttttcttgttatgggttctcagttctgattttgtgttt 39365546  T
Q  530 tccttgttctgcgattcacag 550  Q
    ||||||||||| |||||||||    
T  39365547 tccttgttctgagattcacag 39365567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 227 - 545
Target Start/End: Complemental strand, 26290863 - 26290545
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  26290863 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 26290764  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  26290763 ttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccat 26290664  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  26290663 tcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctcagttctgattttgtg 26290564  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||||||||||||||||||    
T  26290563 ttttccttgttctgcgatt 26290545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 227 - 545
Target Start/End: Complemental strand, 26304120 - 26303802
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  26304120 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 26304021  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  26304020 ttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccat 26303921  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  26303920 tcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctcagttctgattttgtg 26303821  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||||||||||||||||||    
T  26303820 ttttccttgttctgcgatt 26303802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 227 - 550
Target Start/End: Complemental strand, 34565113 - 34564790
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||    
T  34565113 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcctattccttctt 34565014  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||    
T  34565013 tttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtattctgcgaagattttcaaaaccatactttctcacgtccat 34564914  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  34564913 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttttgttatgggttctcagttctgattttgtg 34564814  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||| ||||||||    
T  34564813 ttttccttgttctgctattcacag 34564790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 42512159 - 42512481
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42512159 gagtttttctacttgcatcctagttaatcatggttgcatcccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 42512258  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||    
T  42512259 tttggttacaccccaaaacccctcttccaaaattataattctccaatcgatcgattgtgttctccgaagattttcaaaaccatactttctcacgtccatt 42512358  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  42512359 catgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 42512458  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||| ||||||||    
T  42512459 tttccttgttctgccattcacag 42512481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 228 - 545
Target Start/End: Complemental strand, 43664408 - 43664092
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43664408 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 43664309  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  43664308 tttggttacaccccaaaacccttcttccaaaaccataattctccaattgat-gattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43664210  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  43664209 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctcagttctgattttgtgt 43664110  T
Q  528 tttccttgttctgcgatt 545  Q
    ||||   |||||||||||    
T  43664109 tttcacagttctgcgatt 43664092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 226 - 501
Target Start/End: Complemental strand, 3032983 - 3032708
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||    
T  3032983 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataacatttgattttcaaaaagcctatttcttct 3032884  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||    
T  3032883 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttca 3032784  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtt 501  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3032783 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttccttgtt 3032708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 226 - 485
Target Start/End: Original strand, 17122088 - 17122347
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17122088 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 17122187  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  17122188 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 17122287  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcga 485  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17122288 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 17122347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 228 - 501
Target Start/End: Original strand, 5988188 - 5988461
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||    
T  5988188 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttcttt 5988287  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
     ||||||||| |||||||||| |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  5988288 cttggttacatcccaaaacccctcttccaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 5988387  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtt 501  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5988388 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgtt 5988461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 229 - 481
Target Start/End: Original strand, 34917539 - 34917791
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttt 328  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  34917539 agtttttctacttgcaccctagttaatcatggatgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttctttt 34917638  T
Q  329 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccattc 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  34917639 ttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccattc 34917738  T
Q  429 atgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaa 481  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34917739 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaa 34917791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 226 - 501
Target Start/End: Complemental strand, 3137310 - 3137035
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  3137310 aagagtttttctacttgcaccgtagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttct 3137211  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    || |||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  3137210 ttcttggttacaccccaaaacccctcttcgaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 3137111  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtt 501  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  3137110 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtcttgttcttcaatcgattgtgttttccttgtt 3137035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 227 - 489
Target Start/End: Original strand, 8656553 - 8656815
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  8656553 agagtttttctacttgcaccctagttaatcatggttgcaaccaaaaatgacaagattaacctttcataaaatttgattttcaaaaagtctattccttctt 8656652  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  8656653 ttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 8656752  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgt 489  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8656753 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt 8656815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 226 - 450
Target Start/End: Complemental strand, 22439691 - 22439467
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  22439691 aagagtttttctacttgcatcctagttaatcatggttacacctcaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 22439592  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  22439591 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 22439492  T
Q  426 ttcatgatttcaaagaaaattcgaa 450  Q
    |||||||||||||||||||||||||    
T  22439491 ttcatgatttcaaagaaaattcgaa 22439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 28885798 - 28885723
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28885798 taagagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 28885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 28909661 - 28909734
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28909661 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 28909734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 15839455 - 15839527
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15839455 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 15839527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 12713661 - 12713578
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaa 310  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  12713661 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacctttttataaaatttgattttcaaa 12713578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 11587896 - 11587970
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11587896 aagagtttttctacttgcaccctaattaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 11587970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 8014008 - 8013936
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8014008 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 8013936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 37577983 - 37578055
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37577983 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 37578055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 5599947 - 5599872
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  5599947 taagagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaattt 5599872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 225 - 300
Target Start/End: Original strand, 5640673 - 5640748
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  5640673 taagagtttttctacttgcaccctagttaatcatggttgcattccaaaatgacaagattaccctttcataaaattt 5640748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 17601333 - 17601406
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17601333 agagtttttctaattgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 17601406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 228 - 340
Target Start/End: Complemental strand, 31793933 - 31793821
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | |||    
T  31793933 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctttttt 31793834  T
Q  328 tttggttacaccc 340  Q
     ||||||||||||    
T  31793833 cttggttacaccc 31793821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 12722579 - 12722682
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||  | ||| |||||||||||| |||| || |    
T  12722579 ttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatccct 12722678  T
Q  351 cttc 354  Q
    ||||    
T  12722679 cttc 12722682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 42688002 - 42687908
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||| | |||| | ||| |||||||||||| ||||    
T  42688002 ttaatcttggttgcaccccaaaatgacaaaattacccttccataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaa 42687908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 354
Target Start/End: Complemental strand, 41942448 - 41942319
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||| ||  |||||  |||||| |||||||| ||||||||||||| |||| |||| |||||||||| ||||||||||||| | || | |     
T  41942448 taagagtttttctaattacaccctgtttaatcctggttgcatcccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttacttt 41942349  T
Q  325 ttttttggttacaccccaaaacccttcttc 354  Q
    ||| |||||||||||| |||| || |||||    
T  41942348 tttcttggttacaccctaaaatccctcttc 41942319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 258 - 345
Target Start/End: Complemental strand, 38168539 - 38168452
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    ||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||||| |||||| | ||| |||||||||||| ||||    
T  38168539 tggttgcactccaaaatgataaaattacccttccataaaatttaattttcaaaaagcatattccttttttcttggttacaccctaaaa 38168452  T

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Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 431 - 505
Target Start/End: Complemental strand, 2828232 - 2828158
Alignment:
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgg 505  Q
    ||||||||||||||||||||| |||| |||||| |||||  |||||||| |||||||||||||||||||| ||||    
T  2828232 gatttcaaagaaaattcgaagcaaataaggttaacaagttgtgttcttcgatcgattgtgtttttcttgtcatgg 2828158  T

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Target: chr8; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 345
Target Start/End: Complemental strand, 36057817 - 36057699
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||  |||||||||||||||||||||  |||| |||| |||||||||| ||||||||||||| | |||| | ||    
T  36057817 agagtttttctaattacaccctgtttaattctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccttttt 36057718  T
Q  327 ttttggttacaccccaaaa 345  Q
    | |||||||||||| ||||    
T  36057717 tcttggttacaccctaaaa 36057699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 11266156 - 11266259
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| |||||||||| |||||||| |||||||| |||  ||||||||| ||||||||||||| | |||| | ||| |||||||||||| |||| || |    
T  11266156 ttaatcctggttgcacctcaaaatgataagattactcttctataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccct 11266255  T
Q  351 cttc 354  Q
    ||||    
T  11266256 cttc 11266259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 353
Target Start/End: Complemental strand, 5347538 - 5347437
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||| ||||  ||||||| || |||||||||||||||||||| | ||||||||||||| |||| | ||| | |||||||||||||||||| |    
T  5347538 ttaatcctggttacaccttaaaatgataaaattaccctttcataaaatttaagtttcaaaaagcctcttcc-tttttatcggttacaccccaaaacccct 5347440  T
Q  351 ctt 353  Q
    |||    
T  5347439 ctt 5347437  T

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Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 354
Target Start/End: Complemental strand, 7970081 - 7969992
Alignment:
Q  264 caccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||| |||||||||| |||||| ||||||||||||| ||||| |||||| || |||| ||||| ||||||||||| |||||||| |||||    
T  7970081 caccctaaaatgacaaaattaccttttcataaaattt-atttttaaaaagtcttttccttctttcttggttacacctcaaaacccctcttc 7969992  T

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Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 431 - 503
Target Start/End: Complemental strand, 7969938 - 7969866
Alignment:
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttat 503  Q
    ||||||||||||||||||||| | || ||||||| ||||  |||||||||||||||| ||||||||| |||||    
T  7969938 gatttcaaagaaaattcgaaggagatgaggttagtaagttgtgttcttcaatcgattatgtttttctagttat 7969866  T

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Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 4005764 - 4005891
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||| | |  |||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | ||    
T  4005764 agagtttttctaattacaccctgtttaatcctggttgtatcttaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttt 4005863  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    | ||||||| |||| |||| || |||||    
T  4005864 tcttggttataccctaaaatccctcttc 4005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 354
Target Start/End: Complemental strand, 38460186 - 38460060
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||||||| ||||||||||| |||||||||  |||||| || |||||| |||||| | |||| | ||    
T  38460186 agagtttttctaattacaccctgattaatcctggttgcacctcaaaatgacaaaattacccttctataaaa-ttaattttcgaaaagcatcttccttttt 38460088  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    |||| ||||||||| |||| || |||||    
T  38460087 tttttgttacaccctaaaatccctcttc 38460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 38945711 - 38945774
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||| ||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||||    
T  38945711 ttaatcctggttgcaccctaaaatgacaaaattatccttccataaaatttaattttcaaaaagc 38945774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 16571303 - 16571214
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccc 348  Q
    ||||| || ||||||||||||| | |||||||||||||| ||| ||||| |||||||   |||| ||||| |||||||||||| |||||||    
T  16571303 tggtttcaacccaaaatgacaaaactaccctttcataaagttt-atttttaaaaagctgtttccttctttcttggttacacccgaaaaccc 16571214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 35329813 - 35329725
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||||||||||| ||  ||| |  |||||| ||||||||| |||||||||||| |||| |||| ||||||| || |||||||||||||    
T  35329813 taagagtttttctaattacaccatgtttaatcctggttgcactccaaaatgacaaaattatccttccataaaa-ttaattttcaaaaagc 35329725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 38234416 - 38234503
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||||||||| ||  |||||| |||||| || ||||||  ||||||||||| || | |||| |||||||||| ||||| |||||||    
T  38234416 agagtttttctaattacaccctatttaatcctgtttgcacttcaaaatgacaaaatgatccttccataaaatttaatttttaaaaagc 38234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 4229659 - 4229753
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| ||||||||   ||||||||||  |||| |||| |||||||||| ||||||||||| | | |||| | ||| |||||||||||| ||||    
T  4229659 ttaatcctggttgcatttcaaaatgacagaattatccttccataaaatttaattttcaaaaaacatcttccttttttcttggttacaccctaaaa 4229753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 339
Target Start/End: Original strand, 5552 - 5621
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacacc 339  Q
    |||||||||| |||| |||| |||||||||| ||||||||||||  | |||| | ||| |||||||||||    
T  5552 aaaatgacaaaattatccttccataaaatttaattttcaaaaagtatcttccttttttcttggttacacc 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 550
Target Start/End: Complemental strand, 3032723 - 3032695
Alignment:
Q  522 ttgtgttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||||||    
T  3032723 ttgtgttttccttgttctgcgattcacag 3032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 228 - 545
Target Start/End: Original strand, 9065698 - 9066015
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9065698 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 9065797  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  9065798 tttggttacaccccaaaacccttcttccaaaaccataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 9065897  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  9065898 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 9065997  T
Q  528 tttccttgttctgcgatt 545  Q
    ||||||||||||||||||    
T  9065998 tttccttgttctgcgatt 9066015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 227 - 550
Target Start/End: Original strand, 33280808 - 33281131
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33280808 agagtttttctacttgcaccctagttaatcatggttgtaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 33280907  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  33280908 ttttggttacaccccaaaacccttcttccaaaaccataattttccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 33281007  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  33281008 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctcagttctgattttgtg 33281107  T
Q  527 ttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||    
T  33281108 ttttccttgttctgcgattcacag 33281131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 4156254 - 4155932
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4156254 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 4156155  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  4156154 tttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccatt 4156055  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  4156054 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctcagttctgattttgtgt 4155955  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||| ||||||| ||||||||||    
T  4155954 tttcattgttctacgattcacag 4155932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 19034808 - 19034484
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| |||    
T  19034808 aagagtttttctacttgcaccttagttaatcatggttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcttattccttct 19034709  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  19034708 tttttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcta 19034609  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19034608 tttatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttctgattttgt 19034509  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  19034508 gttttccttgttctgcgattcacag 19034484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 226 - 550
Target Start/End: Original strand, 24559066 - 24559390
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  24559066 aagagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttct 24559165  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  24559166 tttttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtcca 24559265  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  24559266 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 24559365  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  24559366 gttttccttgttctgcgattcacag 24559390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 226 - 550
Target Start/End: Original strand, 24600098 - 24600422
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  24600098 aagagtttttctacttgcaccctagttagtcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagtctattccttct 24600197  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  24600198 tttttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtcca 24600297  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  24600298 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgt 24600397  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  24600398 gttttccttgttctgcgattcacag 24600422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 43293743 - 43293421
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  43293743 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattatccttttataaaatttgattttcaaaaagcctattccttcttt 43293644  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  43293643 tttggttacaccccaaaacccttcttccaaaaccataattctccaacagatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 43293544  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  43293543 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctcagttctgattttgtgt 43293444  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||| ||||||    
T  43293443 tttccttgttctgcgagtcacag 43293421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 13145966 - 13145645
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||    
T  13145966 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaaaccttttccttcttt 13145867  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  13145866 tttgattacaccccaaaacccttcttccaaaaccataattctcaaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccatt 13145767  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  13145766 catgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctcagttctgattttgtgt 13145668  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  13145667 tttccttgttctgcgattcacag 13145645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 225 - 550
Target Start/End: Original strand, 37865872 - 37866197
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||| || ||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| | ||    
T  37865872 taagagtttttctacttgcactctaattaatcatgattgcaccccaaaatgacaaaattatcctttcataaaatttgattttcaaaaagcctatttcttc 37865971  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||     
T  37865972 ttttttggttacaccccaaaaccattcttccaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtct 37866071  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  37866072 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgattttg 37866171  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    || |||||||||||||||||||||||    
T  37866172 tgctttccttgttctgcgattcacag 37866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 227 - 498
Target Start/End: Complemental strand, 31527664 - 31527393
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31527664 agagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttctt 31527565  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  31527564 ttttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcat 31527465  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 498  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31527464 tcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 31527393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 227 - 540
Target Start/End: Complemental strand, 43518378 - 43518062
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  43518378 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagagtaccctttcataaaatttgattttcaaaaagcatattccttctt 43518279  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    | |||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  43518278 tcttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 43518179  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgt-ttttcttgttatggattctcagtttt--gatttt 523  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |  ||||||    
T  43518178 taatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctcagttctgcgatttt 43518079  T
Q  524 gtgttttccttgttctg 540  Q
    |||||||||||||||||    
T  43518078 gtgttttccttgttctg 43518062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 25084855 - 25084928
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25084855 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 25084928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 25142828 - 25142901
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25142828 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 25142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 38760608 - 38760537
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 299  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38760608 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatt 38760537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 6470020 - 6469947
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6470020 agagtttttctacttgcaccttagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 6469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 19617812 - 19617736
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  19617812 ttaagagtttttctacttgcaccctagttaatcatagttgcaccccaaaataacaagattaccctttcataaaattt 19617736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 225 - 348
Target Start/End: Original strand, 36294178 - 36294301
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||| ||  ||| |  |||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||| |||| |||| ||    
T  36294178 taagagtttttctaattacaccatgtttaatcatggttacaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaggcctcttccttc 36294277  T
Q  325 ttttttggttacaccccaaaaccc 348  Q
    ||  |||| |||||||||||||||    
T  36294278 ttccttggctacaccccaaaaccc 36294301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 227 - 354
Target Start/End: Original strand, 40738891 - 40739018
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| || |||| | ||    
T  40738891 agagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttccttttt 40738990  T
Q  327 ttttggttacaccccaaaacccttcttc 354  Q
    | |||||||||||| |||| || |||||    
T  40738991 tcttggttacaccctaaaatccctcttc 40739018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 226 - 354
Target Start/End: Original strand, 18864428 - 18864556
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| ||  |||||  |||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||| || |||| | |    
T  18864428 aagagtttttctaattacaccctgtttaatcctggttgcaccctaaaatgacaaaattaccctttcataaaatttaattttaaaaaagactcttcctttt 18864527  T
Q  326 tttttggttacaccccaaaacccttcttc 354  Q
    || |||||||||||| |||| || |||||    
T  18864528 ttcttggttacaccctaaaatccctcttc 18864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 29920290 - 29920362
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  29920290 gagtttttctactagcaccctagttaatcatggttgcacctcaaaataacaagattaccctttcataaaattt 29920362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 354
Target Start/End: Complemental strand, 10666225 - 10666096
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    ||||||||||| || ||  |||||  |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  | |||| |     
T  10666225 taagagtttttataattacaccctgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagtatcttccttt 10666126  T
Q  325 ttttttggttacaccccaaaacccttcttc 354  Q
    ||| |||||||||||| |||| || |||||    
T  10666125 tttcttggttacaccctaaaatccctcttc 10666096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 226 - 346
Target Start/End: Complemental strand, 12189393 - 12189273
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||| ||  ||| |  |||||| ||||| ||||||||||||| || ||||||||| |||||||||| ||||||||||| ||| | || |||    
T  12189393 aagagtttttctaattacaccttgtttaatcctggttacaccccaaaatgataaaattacccttccataaaatttaattttcaaaaaacctctcccttct 12189294  T
Q  326 tttttggttacaccccaaaac 346  Q
    || ||||||||||||||||||    
T  12189293 ttcttggttacaccccaaaac 12189273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 228 - 340
Target Start/End: Complemental strand, 41882005 - 41881893
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||  |||||||||||||||||||||| |||||| || |||||||||| ||||||||||||| |||||| | |||    
T  41882005 gagtttttctaattacaccctgtttaattttggttgcaccccaaaatgacaaaattacctttccataaaatttaattttcaaaaagcatattcctttttt 41881906  T
Q  328 tttggttacaccc 340  Q
     ||||||||||||    
T  41881905 cttggttacaccc 41881893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 8232566 - 8232669
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | | |||| | ||| || ||||||||| |||| || |    
T  8232566 ttaatcctggttgcaccccaaaatgataagattaccctttcataaaatttaattttcaaaaaacatcttccttttttcttagttacaccctaaaatccgt 8232665  T
Q  351 cttc 354  Q
    ||||    
T  8232666 cttc 8232669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 31484679 - 31484761
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccc 340  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||| | ||| ||||||||||||    
T  31484679 tggttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccc 31484761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 494 - 550
Target Start/End: Complemental strand, 31511205 - 31511149
Alignment:
Q  494 ttcttgttatggattctcagttttgattttgtgttttccttgttctgcgattcacag 550  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  31511205 ttcttgttatgggttctcagttctgattttgtgttttccttgttctgcgattcacag 31511149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 7338643 - 7338706
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  7338643 ttaatcctggttgcaccccaaaatgacaaaattaccttttcataaaatttaattttcaaaaagc 7338706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 37274677 - 37274574
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| || ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||  | ||| |||||||||||| |||| || |    
T  37274677 ttaatcctgcttgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatccct 37274578  T
Q  351 cttc 354  Q
    ||||    
T  37274577 cttc 37274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 337
Target Start/End: Original strand, 4621169 - 4621255
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttaca 337  Q
    |||||| |||||||| || |||||||||| |||||||||||||||||||| |||||||||||| || |||| | ||| |||||||||    
T  4621169 ttaatcctggttgcatcctaaaatgacaaaattaccctttcataaaatttaattttcaaaaagactcttccttttttcttggttaca 4621255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 224 - 339
Target Start/End: Original strand, 37340796 - 37340911
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  |||||  |||||  || ||||| ||||||||||||  |||| |||| |||||||||| ||||||||||||| | |||| |    
T  37340796 ttaagagtttttctaattacaccctgtttaattctgattgcatcccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcctt 37340895  T
Q  324 cttttttggttacacc 339  Q
     |||||||||||||||    
T  37340896 tttttttggttacacc 37340911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 228 - 331
Target Start/End: Complemental strand, 43548668 - 43548565
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||| ||  |||||  |||||| |||||||||||||||||||||  |||| |||| |||||||||| ||||||||||||| | |||| | |||    
T  43548668 gagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttccgttttt 43548569  T
Q  328 tttg 331  Q
    ||||    
T  43548568 tttg 43548565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 431 - 505
Target Start/End: Complemental strand, 12189224 - 12189150
Alignment:
Q  431 gatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgg 505  Q
    ||||||||||||| ||||||| |||| ||||||||||||| |||||||| ||| ||| |||||||||||| ||||    
T  12189224 gatttcaaagaaagttcgaagcaaatgaggttagcaagtggtgttcttcgatcaattatgtttttcttgtcatgg 12189150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 345
Target Start/End: Complemental strand, 42437437 - 42437343
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    |||||| |||||||||||||||||||||  |||| |||| |||||||||| ||||||||||||| | |||  | ||| |||||||||||| ||||    
T  42437437 ttaatcctggttgcaccccaaaatgacagaattatccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaa 42437343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 354
Target Start/End: Original strand, 6245188 - 6245313
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttt 328  Q
    |||||||||| ||  |||||  |||||  ||||||||| | | |||||||| ||||| |||||||||||||| |||||||||||| || |||| | |||     
T  6245188 agtttttctaattacaccctgtttaattctggttgcactctagaatgacaaaattacactttcataaaatttaattttcaaaaagactcttccttttttc 6245287  T
Q  329 ttggttacaccccaaaacccttcttc 354  Q
    |||||||||||| |||| || |||||    
T  6245288 ttggttacaccctaaaatccctcttc 6245313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 13211051 - 13210948
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccctt 350  Q
    |||||| ||||||||||  |||||||||| |||||  || |||||||||| ||||||||||||| | |||| | ||| |||||||||||| |||| || |    
T  13211051 ttaatcctggttgcaccttaaaatgacaaaattactgttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccct 13210952  T
Q  351 cttc 354  Q
    ||||    
T  13210951 cttc 13210948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 354
Target Start/End: Complemental strand, 15272853 - 15272728
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttt 328  Q
    |||||||||| ||  |||||  |||||| |||||||||  ||||||| ||| |||| |||| |||||||||| ||||||||||||| | || | | |||     
T  15272853 agtttttctaattacaccctgtttaatcctggttgcacttcaaaatgtcaaaattatccttccataaaatttaattttcaaaaagcatctttcttttttc 15272754  T
Q  329 ttggttacaccccaaaacccttcttc 354  Q
    |||||||||||| |||| || |||||    
T  15272753 ttggttacaccctaaaatccctcttc 15272728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 37105892 - 37105970
Alignment:
Q  270 aaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaaccct 349  Q
    |||||||||| |||||||||||||||||||| ||||||||||| | | |||| | |||||| ||||||||| ||| ||||    
T  37105892 aaaatgacaaaattaccctttcataaaatttaattttcaaaaaacgtcttcc-tttttttttgttacacccaaaatccct 37105970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 18978473 - 18978535
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaag 313  Q
    |||||| |||||||||||||||||||||  |||| ||||  ||||||||| ||||||||||||    
T  18978473 ttaatcctggttgcaccccaaaatgacagaattatccttctataaaatttaattttcaaaaag 18978535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 31498837 - 31498923
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    ||||||||||| ||  |||||  |||||  | ||||||| | |||||||||| ||||||||| |||||||||| |||||||||||||    
T  31498837 gagtttttctaattacaccctgtttaattcttgttgcactctaaaatgacaaaattacccttccataaaatttaattttcaaaaagc 31498923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 18522184 - 18522245
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaa 312  Q
    |||||| ||||||||||| ||||| |||| |||| |||| |||||||||| |||||||||||    
T  18522184 ttaatcctggttgcaccctaaaataacaaaattatccttccataaaatttaattttcaaaaa 18522245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 226 - 550
Target Start/End: Original strand, 13860 - 14185
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13860 aagagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 13959  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  13960 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtcca 14059  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttc-aatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||    
T  14060 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaaatcgattgtgtttttcttgttatgggttctcagttctgattttg 14159  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||| ||||||||||||||||||    
T  14160 tgttttcattgttctgcgattcacag 14185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 276; Significance: 1e-154; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 29122442 - 29122116
Alignment:
Q  226 aagagtttttctacttgtac--cctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29122442 aagagtttttctacttgcacaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattcctt 29122343  T
Q  324 cttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtc 423  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  29122342 cttttttggttacacctcaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtc 29122243  T
Q  424 cattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgatttt 523  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||    
T  29122242 cattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctcagttctgatttt 29122143  T
Q  524 gtgttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||||    
T  29122142 gtgttttccttgttctgcgattcacag 29122116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 7141263 - 7141585
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  7141263 gagtttttctacttgcaccctagttaatcatagttgcaccccaaaataacaagattatcctttcataaaatttgattttcaaaaagcctattccttcttt 7141362  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7141363 tttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 7141462  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  7141463 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttttgttatgggttctcagttctgattttgtgt 7141562  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  7141563 tttccttgttctgcgattcacag 7141585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 225 - 550
Target Start/End: Original strand, 6625355 - 6625680
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  6625355 taagagtttttctacttacaccctagttaatcatggttgcaccctaaaatgacaagattatcctttcataaaatttgattttcaaaaagcctattccttc 6625454  T
Q  325 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcc 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||| |    
T  6625455 ttttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttc 6625554  T
Q  425 attcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttg 524  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  6625555 attcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatagattgtgtttttcttgttatgggttctcagttctgattttg 6625654  T
Q  525 tgttttccttgttctgcgattcacag 550  Q
    ||||||||||||||||||||||||||    
T  6625655 tgttttccttgttctgcgattcacag 6625680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 228 - 550
Target Start/End: Original strand, 18893675 - 18893997
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  18893675 gagtttttctacttgcaccctagttaatcatggttacaccccaaaatgacaagattatcctttcataaaatttgattttcaaaaagcatattccttcttt 18893774  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  18893775 tttggttacaccccaaaacccttcttccagaaccataattctccaaccgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 18893874  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18893875 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgt 18893974  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  18893975 tttccttgttctgcgattcacag 18893997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 6168020 - 6167698
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  6168020 gagtttttctacttgcaccctagttaatcatggttgcaccctaaaatgacaagattaacctttcataaaatttgattttcaaaaagcctattccttcttt 6167921  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||    
T  6167920 tttggttacaccccaaaacccttcttccaaatccataattctccaatcgatcgattgtgttctgcgaagattttcaaacccatactttctcacgtccatt 6167821  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | | ||||||||| |||||||||||    
T  6167820 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtggtcggttctcagttctgattttgtgt 6167721  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  6167720 tttccttgttctgcgattcacag 6167698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 227 - 540
Target Start/End: Complemental strand, 29630581 - 29630267
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29630581 agagtttttttacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcatattccttctt 29630482  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  29630481 tcttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 29630382  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gattttg 524  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |  |||||||    
T  29630381 tcatgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttcttatgggttctcagttctgcgattttg 29630283  T
Q  525 tgttttccttgttctg 540  Q
    ||||||||||||||||    
T  29630282 tgttttccttgttctg 29630267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 227 - 539
Target Start/End: Original strand, 3094587 - 3094901
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  3094587 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattaccctttcataaaatttgattttcaaaaagcatattccttctt 3094686  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    | |||||||||||||||||||  |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  3094687 tcttggttacaccccaaaacctctcttccaaaaccataattctccaatcgatcgattatgttctgcgaagattttcaaaaccatactttctcacgtccat 3094786  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagtttt--gattttg 524  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |  |||||||    
T  3094787 tcatgatttcaaataaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctcagttctgcgattttg 3094886  T
Q  525 tgttttccttgttct 539  Q
    |||||||||||||||    
T  3094887 tgttttccttgttct 3094901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 228 - 447
Target Start/End: Complemental strand, 25335222 - 25335003
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  25335222 gagtttttctacttgcaccctagttaatcatggttgcacctcaaaatgacaagattatcctttcataaaatttgattttcaaaaagcttattccttcttt 25335123  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25335122 ttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 25335023  T
Q  428 catgatttcaaagaaaattc 447  Q
    ||||||||||||||||||||    
T  25335022 catgatttcaaagaaaattc 25335003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 226 - 422
Target Start/End: Complemental strand, 13890044 - 13889848
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13890044 aagagtttttctacttgcaccctaattaatcatggttgcaccccaaaataacaagattaccctttcataaaatttgattttcaaaaagcctattccttct 13889945  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgt 422  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  13889944 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgt 13889848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 354
Target Start/End: Original strand, 6925773 - 6925903
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccat 323  Q
    ||||||||||||||| ||  |||||  |||||| || ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| | |||| |    
T  6925773 ttaagagtttttctaattacaccctgtttaatcctgattgcaccccaaaatgacaaaattacccttccataaaatttaattttcaaaaagcatcttcctt 6925872  T
Q  324 cttttttggttacaccccaaaacccttcttc 354  Q
     ||| ||||||||| || |||| || |||||    
T  6925873 ttttcttggttacatcctaaaatccctcttc 6925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 7081002 - 7081098
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||| ||||||||||||| || |||| ||||  ||||||||||||||||||||||||| |||| |||||||||||||||| |||||| || |||||    
T  7081002 tggttacaccccaaaatgataaaattatccttagataaaatttgattttcaaaaagcctcttccttcttttttggttacactccaaaatccctcttc 7081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 473 - 531
Target Start/End: Complemental strand, 13889849 - 13889791
Alignment:
Q  473 gttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgttttc 531  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  13889849 gttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgttttc 13889791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 8811357 - 8811261
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||| ||||||||||||| || |||| |||| |||||||||||||||| ||||||| | |||| | ||| |||||||||| |||||||||||||||    
T  8811357 tggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 8811261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 34085904 - 34085811
Alignment:
Q  252 taatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaa 345  Q
    ||||| |||||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| | |||| | ||| ||||||| |||| ||||    
T  34085904 taatcctggttgcaccccaaaatgacaaaattatccttccataaaatttaattttcaaaaagcatcttccttttttcttggttataccctaaaa 34085811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 31091233 - 31091150
Alignment:
Q  224 ttaagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttc 307  Q
    ||||||||||||||| ||  ||| |  |||||| |||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  31091233 ttaagagtttttctaattacaccatgtttaatcctggttgcaccccaaaatgacaaaattacccttccataaaatttaattttc 31091150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 354
Target Start/End: Original strand, 18024376 - 18024505
Alignment:
Q  225 taagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatc 324  Q
    |||||||||||||| ||  |||||  |||||  ||||| ||  | |||||||||| ||| |||||||||||||| | ||||| ||||||| | |||| ||    
T  18024376 taagagtttttctaattacaccctgtttaattctggttacattctaaaatgacaaaattgccctttcataaaatctaattttgaaaaagcttcttccttc 18024475  T
Q  325 ttttttggttacaccccaaaacccttcttc 354  Q
    ||| |||||||||||| ||||||| |||||    
T  18024476 tttcttggttacacccgaaaacccctcttc 18024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 340
Target Start/End: Original strand, 23350353 - 23350466
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||||||||||||||||  | |||| |||| |||||||||| ||||||||||||| | |||| | ||    
T  23350353 agagtttttctaattacaccctgtttaatcctggttgcaccccaaaatgatcaaattatccttccataaaatttaattttcaaaaagcatcttccttttt 23350452  T
Q  327 ttttggttacaccc 340  Q
    | ||| ||||||||    
T  23350453 tcttgtttacaccc 23350466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 5714907 - 5715003
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||  |||||| |||| |||||||||||||||||||| ||||||||||||| | |||  | | |||||||||||||| |||| || |||||    
T  5714907 tggttgcacttcaaaataacaaaattaccctttcataaaatttaattttcaaaaagcatcttcattttcttttggttacaccctaaaatccctcttc 5715003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 11369165 - 11369053
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||| ||  |||||  |||||| |||||||||| ||||||||||| ||||| |||  ||||||||| ||||||||||||  | |||| | ||    
T  11369165 agagtttttctaattacaccctgtttaatcttggttgcacctcaaaatgacaaaattactcttctataaaatttaattttcaaaaagaatcttccttttt 11369066  T
Q  327 ttttggttacacc 339  Q
    | |||||||||||    
T  11369065 tcttggttacacc 11369053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 7081155 - 7081228
Alignment:
Q  432 atttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgg 505  Q
    |||||||||||| ||||||| |||| |||||| |||||  | |||||||||| ||| |||||||||||||||||    
T  7081155 atttcaaagaaatttcgaagcaaataaggttaacaagttgtattcttcaatcaattatgtttttcttgttatgg 7081228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 505
Target Start/End: Complemental strand, 8811204 - 8811131
Alignment:
Q  432 atttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgg 505  Q
    |||||||||||| ||| ||| |||| ||||||||||||  | |||||||||| ||| |||||||||||||||||    
T  8811204 atttcaaagaaatttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgg 8811131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 353
Target Start/End: Complemental strand, 32173794 - 32173670
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttca-aaaagcctattccatcttt 327  Q
    |||||||||| ||  |||||  |||||  ||||| || ||||||||||||| |||||| ||| ||||||||| ||||||| |||||||| |||| | |||    
T  32173794 agtttttctaattacaccctgtttaattctggttacatcccaaaatgacaaaattaccattttataaaatttaattttcaaaaaagcctcttcc-ttttt 32173696  T
Q  328 tttggttacaccccaaaacccttctt 353  Q
     | |||||||||||||||||| ||||    
T  32173695 ctcggttacaccccaaaacccctctt 32173670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 8525555 - 8525611
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||||| |||||||||| || ||||||||| |||||||||| |||||||||||||    
T  8525555 tggttgcatcccaaaatgataaaattacccttccataaaatttaattttcaaaaagc 8525611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 29623233 - 29623170
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagc 314  Q
    |||||| ||||||||||  |||||||||| |||| | || |||||||||| |||||||||||||    
T  29623233 ttaatcctggttgcaccttaaaatgacaaaattatctttccataaaatttaattttcaaaaagc 29623170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 13445463 - 13445402
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaa 312  Q
    |||||| |||||||| || |||||||||| ||||| |||  ||||||||| |||||||||||    
T  13445463 ttaatcctggttgcatcctaaaatgacaaaattactcttctataaaatttaattttcaaaaa 13445402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 227 - 545
Target Start/End: Complemental strand, 2200 - 1882
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  2200 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcccattccttctt 2101  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  2100 ttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccat 2001  T
Q  427 tcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtg 526  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  2000 tcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctcagttctgattttgtg 1901  T
Q  527 ttttccttgttctgcgatt 545  Q
    |||||||||||||||||||    
T  1900 ttttccttgttctgcgatt 1882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 263; Significance: 1e-146; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 228 - 550
Target Start/End: Complemental strand, 157199 - 156878
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  157199 gagtttttctacttgcaccctagttaatcatggttgcaccaaaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 157100  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  157099 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccatt 157000  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgtgt 527  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| | |||||||||    
T  156999 catgattttcaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgcg-ttttcttgttatgggttctcagttctaattttgtgt 156901  T
Q  528 tttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||    
T  156900 tttccttgttctgcgattcacag 156878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 312
Target Start/End: Original strand, 200056 - 200117
Alignment:
Q  251 ttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaa 312  Q
    |||||| ||| |||| ||||||||||||| ||||||||| |||||||||| |||||||||||    
T  200056 ttaatcctggatgcatcccaaaatgacaaaattacccttccataaaatttaattttcaaaaa 200117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 257; Significance: 1e-143; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 226 - 550
Target Start/End: Complemental strand, 14135 - 13812
Alignment:
Q  226 aagagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatct 325  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||| |||    
T  14135 aagagtttttctacttgcaccctagttaatcatggttgcaccccaaaattataagattatcctttcataaaatttgattttcaaaaagcctattccttct 14036  T
Q  326 tttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtcca 425  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  14035 tttttggttacaccccaaaaccctttttccaaaacgataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtcca 13936  T
Q  426 ttcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctcagttttgattttgt 525  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  13935 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt-ttgttatgggttctcagttctgattttgt 13837  T
Q  526 gttttccttgttctgcgattcacag 550  Q
    |||||||||||||||||||||||||    
T  13836 gttttccttgttctgcgattcacag 13812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 228 - 478
Target Start/End: Original strand, 12520 - 12770
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttt 327  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12520 gagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccttcttt 12619  T
Q  328 tttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccatt 427  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  12620 tttggttacaccccaaaacccttcttccaaaaccataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtccatt 12719  T
Q  428 catgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttctt 478  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12720 catgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttctt 12770  T

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Target: scaffold0248 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 227 - 427
Target Start/End: Complemental strand, 3109 - 2909
Alignment:
Q  227 agagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctt 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||  |||    
T  3109 agagtttttctacttgcaccctagttaatcatggttgcaccccaaaatgacaatattacccttttataaaatttgattttcaaaaagcatattcctcctt 3010  T
Q  327 ttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatccattgtgttttgcgaagattttcaaaaccatactttctcacgtccat 426  Q
    |  ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3009 tcatggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccat 2910  T
Q  427 t 427  Q
    |    
T  2909 t 2909  T

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Target: scaffold0065 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 228 - 300
Target Start/End: Complemental strand, 38496 - 38424
Alignment:
Q  228 gagtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaattt 300  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38496 gagtttttctacttgcaccctagttaatcatggttgcactccaaaatgacaagattaccctttcataaaattt 38424  T

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Target: scaffold0896 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 3804 - 3708
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    ||||| ||||||||||||| || |||| |||| |||||||||||||||| ||||||| | |||| | ||| |||||||||| |||||||||||||||    
T  3804 tggttacaccccaaaatgataaaattatccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 3708  T

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Target: scaffold0896; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 505
Target Start/End: Complemental strand, 3651 - 3579
Alignment:
Q  432 atttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgg 505  Q
    |||||||||||  ||| ||| |||| ||||||||||||  | |||||||||| ||| |||||||||||||||||    
T  3651 atttcaaagaat-ttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgg 3579  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 354
Target Start/End: Complemental strand, 365905 - 365809
Alignment:
Q  258 tggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatcttttttggttacaccccaaaacccttcttc 354  Q
    |||||||||| ||| ||||||| || ||| || |||||||||| ||||||||||||| | |||| | ||| |||||||||||| |||| || |||||    
T  365905 tggttgcacctcaacatgacaaaatgacctttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 365809  T

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Target: scaffold0578 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 352
Target Start/End: Original strand, 8719 - 8842
Alignment:
Q  229 agtttttctacttgtaccctagttaatcatggttgcaccccaaaatgacaagattaccctttcataaaatttgattttcaaaaagcctattccatctttt 328  Q
    |||||||||| ||  |||||  |||||| |||||||| |  ||||| |||| ||||| ||| |||||||||| ||||||||||||| | |||| | |||     
T  8719 agtttttctaattacaccctgtttaatcctggttgcatcttaaaataacaaaattactcttccataaaatttaattttcaaaaagcatcttccttttttc 8818  T
Q  329 ttggttacaccccaaaacccttct 352  Q
    |||||||||||  |||| ||||||    
T  8819 ttggttacaccttaaaatccttct 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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