View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18764_high_20 (Length: 244)
Name: NF18764_high_20
Description: NF18764
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18764_high_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 44465354 - 44465128
Alignment:
| Q |
18 |
aaactgttaacaaaacaacaaagtttcttccaagtttacaaggtgaaaatatccaaacattactcagcgcgattctgacaaaccaacaaacttgtttgga |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44465354 |
aaactgttaacaaaacaacaaagtttcttccaagtttacaaggtgaaaatatccaaacattactcagcgcgattctgacaaaccaacaaacttgtttgga |
44465255 |
T |
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| Q |
118 |
tggtcttaaagacacttcttcagcttggagttttcgaaatggactcacaattccactttctaatgacaccaaactctatagtgtctctcttgctttcttt |
217 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44465254 |
tggtcttaaagacacttcgtcagcttggagttttcgaaatggactcacaattccactttctaatgacaccaaactctatagtgtctctcttgctttcttt |
44465155 |
T |
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| Q |
218 |
accaaaggttgggttaatcccaaaacc |
244 |
Q |
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||||||||||||||||||||||||||| |
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| T |
44465154 |
accaaaggttgggttaatcccaaaacc |
44465128 |
T |
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