View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18766_high_20 (Length: 325)
Name: NF18766_high_20
Description: NF18766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18766_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 8407527 - 8407681
Alignment:
| Q |
2 |
gatcgaagtggcacaatcacatatgaagaactaaaatctggactgtccaaattgggatccaagcttagtgaatctgaaataaagcagctaatggatgctg |
101 |
Q |
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| T |
8407527 |
gatcgaagtggcacaatcacatatgaagaactaaaatctggactgtccaaattgggatccaagcttagtgaatctgaaataaagcagctaatggatgctg |
8407626 |
T |
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| Q |
102 |
taagttcagtctccggcagttttagaaattaagaacaagtttgatttgagacaac |
156 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8407627 |
taagttcagtctccggcagttttagaaattaagaacaagtttgatttgagacaac |
8407681 |
T |
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