View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18766_high_22 (Length: 313)
Name: NF18766_high_22
Description: NF18766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18766_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 31591179 - 31590877
Alignment:
| Q |
1 |
ataacaaaactaattaggcgaagatgagacattattaagaggaatgagacagatagtaaatactttatctggtgttgctccaaactcttttttgaataca |
100 |
Q |
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| T |
31591179 |
ataacaaaactaattaggcgaagatgagacattattaagaggaatgaaacagatagtaaatactttatctggtgttgctccaaactctttcttgaataca |
31591080 |
T |
|
| Q |
101 |
tcacatatttgttcatacgaagaaaccggacatctatttagcatggactccctcatggtctgaacatactcttgaggaactaagtattcctgtcattgac |
200 |
Q |
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| T |
31591079 |
tcacatatttgttcatacgaagaaaccggacatctatttagcatggactccctcatggtctgaacatactcttgaggaactaagtattcctgtcattgac |
31590980 |
T |
|
| Q |
201 |
aatgaacaatcaaacaactaagcattgcatatcgtgttgagtacataataatttgactacacagtttgaaccgaaatataccaattgcccaagatgatgt |
300 |
Q |
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||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |
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| T |
31590979 |
aataaacaaacaaacaactaagcattgcctatcgtgttgagtacataataatttgactgcacagtttgaaccgaaatataccaattgcccaagatgctgt |
31590880 |
T |
|
| Q |
301 |
cca |
303 |
Q |
| |
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||| |
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| T |
31590879 |
cca |
31590877 |
T |
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