View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18766_low_1 (Length: 1652)

Name: NF18766_low_1
Description: NF18766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18766_low_1
NF18766_low_1
[»] chr8 (54 HSPs)
chr8 (552-1108)||(39887891-39888451)
chr8 (25-501)||(39887389-39887840)
chr8 (1194-1558)||(39889838-39890197)
chr8 (1515-1652)||(39890197-39890334)
chr8 (1277-1448)||(30539132-30539304)
chr8 (1276-1383)||(16982751-16982857)
chr8 (1278-1448)||(6807311-6807480)
chr8 (1277-1446)||(29657702-29657877)
chr8 (1276-1383)||(3676268-3676375)
chr8 (1292-1383)||(37813247-37813338)
chr8 (1276-1448)||(23702275-23702448)
chr8 (1280-1383)||(21486721-21486824)
chr8 (1276-1448)||(45177201-45177375)
chr8 (1286-1445)||(41487360-41487520)
chr8 (1287-1446)||(26823828-26823989)
chr8 (1286-1448)||(32071165-32071325)
chr8 (1194-1252)||(41487268-41487326)
chr8 (1194-1255)||(45177393-45177454)
chr8 (1276-1368)||(25144024-25144116)
chr8 (1276-1367)||(29044687-29044778)
chr8 (1288-1383)||(41567087-41567182)
chr8 (1194-1255)||(30539056-30539117)
chr8 (1321-1446)||(42218429-42218555)
chr8 (1401-1448)||(36688263-36688311)
chr8 (1277-1448)||(20853378-20853549)
chr8 (1399-1445)||(25896993-25897040)
chr8 (1277-1368)||(27545422-27545512)
chr8 (1277-1383)||(22192439-22192545)
chr8 (1277-1367)||(22846526-22846616)
chr8 (1278-1367)||(33298422-33298511)
chr8 (1209-1255)||(44101372-44101418)
chr8 (1276-1373)||(29790834-29790931)
chr8 (1209-1245)||(17070989-17071025)
chr8 (1209-1245)||(17577247-17577283)
chr8 (1194-1254)||(23702194-23702253)
chr8 (1194-1238)||(44269189-44269233)
chr8 (1299-1382)||(5916759-5916842)
chr8 (1278-1313)||(8287745-8287780)
chr8 (1276-1367)||(9762283-9762374)
chr8 (1402-1448)||(22846709-22846756)
chr8 (1278-1313)||(37205682-37205717)
chr8 (1194-1253)||(37813279-37813337)
chr8 (1194-1237)||(41487413-41487456)
chr8 (1194-1237)||(44101492-44101535)
chr8 (1290-1368)||(14880417-14880495)
chr8 (1276-1314)||(17071047-17071085)
chr8 (1321-1383)||(17071807-17071867)
chr8 (1321-1383)||(17576406-17576466)
chr8 (1276-1314)||(17577187-17577225)
chr8 (1392-1445)||(20699450-20699504)
chr8 (1194-1255)||(25144128-25144189)
chr8 (1391-1444)||(26824088-26824141)
chr8 (1203-1240)||(29657901-29657938)
chr8 (1194-1243)||(35213096-35213145)
[»] chr6 (35 HSPs)
chr6 (1276-1448)||(33399786-33399958)
chr6 (1276-1447)||(6036800-6036971)
chr6 (1276-1448)||(30349349-30349522)
chr6 (1276-1446)||(266252-266420)
chr6 (1278-1383)||(26311546-26311651)
chr6 (1289-1444)||(10727347-10727504)
chr6 (1303-1448)||(2853582-2853730)
chr6 (1276-1445)||(18031082-18031250)
chr6 (1287-1448)||(17248636-17248799)
chr6 (1276-1373)||(5003219-5003316)
chr6 (1194-1257)||(12766399-12766461)
chr6 (1280-1383)||(20474849-20474951)
chr6 (1276-1445)||(32143261-32143432)
chr6 (1279-1382)||(26601528-26601631)
chr6 (1286-1368)||(3812822-3812903)
chr6 (1209-1255)||(10727273-10727319)
chr6 (1194-1255)||(2840857-2840918)
chr6 (1280-1339)||(11351746-11351805)
chr6 (1194-1237)||(28011329-28011372)
chr6 (1286-1445)||(239095-239256)
chr6 (1194-1252)||(18031002-18031059)
chr6 (1399-1448)||(30349620-30349670)
chr6 (1209-1255)||(33401240-33401286)
chr6 (1194-1255)||(2853495-2853555)
chr6 (1194-1255)||(30349541-30349601)
chr6 (1194-1234)||(266189-266229)
chr6 (1401-1448)||(2203416-2203464)
chr6 (1194-1237)||(238995-239038)
chr6 (1402-1448)||(2841079-2841126)
chr6 (1194-1237)||(3579662-3579705)
chr6 (1194-1253)||(10727382-10727440)
chr6 (1278-1313)||(12256901-12256936)
chr6 (1276-1383)||(17532318-17532424)
chr6 (1195-1253)||(5003267-5003324)
chr6 (1194-1244)||(32143447-32143497)
[»] chr1 (64 HSPs)
chr1 (1279-1447)||(16874646-16874816)
chr1 (1286-1448)||(3377501-3377665)
chr1 (1280-1448)||(45738936-45739105)
chr1 (1288-1445)||(8301497-8301655)
chr1 (1287-1446)||(1096469-1096630)
chr1 (1277-1372)||(46912332-46912427)
chr1 (1277-1383)||(39642349-39642455)
chr1 (1197-1382)||(44672380-44672555)
chr1 (1276-1373)||(16298197-16298294)
chr1 (1276-1448)||(17760682-17760858)
chr1 (1276-1379)||(25486285-25486387)
chr1 (1276-1383)||(30849370-30849477)
chr1 (1276-1363)||(48319490-48319577)
chr1 (1276-1429)||(49426133-49426284)
chr1 (1276-1383)||(50226531-50226638)
chr1 (1280-1383)||(50401438-50401540)
chr1 (1286-1368)||(41997791-41997873)
chr1 (1288-1445)||(17692730-17692887)
chr1 (1286-1383)||(18632382-18632479)
chr1 (1194-1255)||(23891727-23891788)
chr1 (1276-1448)||(32295093-32295267)
chr1 (1289-1445)||(12960998-12961155)
chr1 (1280-1383)||(14190686-14190789)
chr1 (1276-1383)||(25085533-25085640)
chr1 (1276-1383)||(44436824-44436930)
chr1 (1194-1253)||(45739123-45739182)
chr1 (1194-1255)||(17760875-17760936)
chr1 (1298-1382)||(8009796-8009880)
chr1 (1276-1448)||(14978797-14978970)
chr1 (1276-1383)||(46572893-46572998)
chr1 (1277-1383)||(7579731-7579837)
chr1 (1277-1383)||(23220633-23220739)
chr1 (1399-1447)||(5287838-5287887)
chr1 (1286-1367)||(16545643-16545724)
chr1 (1194-1255)||(39642268-39642329)
chr1 (1194-1253)||(16874691-16874749)
chr1 (1276-1379)||(20224671-20224773)
chr1 (1194-1237)||(41997707-41997750)
chr1 (1276-1366)||(5287367-5287457)
chr1 (1336-1382)||(7060696-7060742)
chr1 (1399-1448)||(12960846-12960896)
chr1 (1277-1367)||(46505311-46505401)
chr1 (1203-1257)||(46573010-46573064)
chr1 (1399-1448)||(51250485-51250535)
chr1 (1194-1255)||(3377697-3377758)
chr1 (1278-1382)||(6320631-6320733)
chr1 (1194-1255)||(12960913-12960974)
chr1 (1287-1383)||(6569658-6569754)
chr1 (1202-1255)||(48319589-48319644)
chr1 (1278-1313)||(14879-14914)
chr1 (1194-1245)||(23220757-23220808)
chr1 (1278-1313)||(32558353-32558388)
chr1 (1278-1313)||(33811562-33811597)
chr1 (1278-1313)||(34988227-34988262)
chr1 (1194-1255)||(1096633-1096695)
chr1 (1400-1445)||(15659259-15659305)
chr1 (1209-1255)||(25486397-25486443)
chr1 (1209-1255)||(27864255-27864300)
chr1 (1399-1429)||(50226412-50226442)
chr1 (1209-1255)||(50401558-50401603)
chr1 (1321-1382)||(6606603-6606664)
chr1 (1202-1255)||(15659056-15659108)
chr1 (1277-1314)||(18216820-18216857)
chr1 (1298-1382)||(19893066-19893150)
[»] chr3 (82 HSPs)
chr3 (1277-1448)||(51315625-51315798)
chr3 (1194-1383)||(44436456-44436645)
chr3 (1277-1448)||(54719138-54719309)
chr3 (1276-1448)||(3916431-3916603)
chr3 (1276-1445)||(44585926-44586097)
chr3 (1276-1374)||(25843441-25843539)
chr3 (1276-1368)||(36687731-36687823)
chr3 (1197-1383)||(44433126-44433311)
chr3 (1276-1447)||(1814697-1814866)
chr3 (1276-1383)||(1938383-1938490)
chr3 (1276-1367)||(19404534-19404625)
chr3 (1276-1383)||(33329757-33329864)
chr3 (1277-1448)||(38177178-38177349)
chr3 (1276-1383)||(43747420-43747527)
chr3 (1277-1383)||(27178288-27178394)
chr3 (1194-1368)||(14856614-14856788)
chr3 (1276-1448)||(20432324-20432497)
chr3 (1276-1383)||(47189734-47189841)
chr3 (1288-1383)||(54464229-54464324)
chr3 (1321-1448)||(38957845-38957975)
chr3 (1276-1382)||(46226765-46226871)
chr3 (1277-1445)||(48348400-48348569)
chr3 (1276-1368)||(7218291-7218383)
chr3 (1276-1368)||(36677651-36677743)
chr3 (1276-1383)||(28712521-28712628)
chr3 (1209-1255)||(54719073-54719119)
chr3 (1194-1255)||(14340801-14340862)
chr3 (1194-1251)||(25154370-25154427)
chr3 (1194-1255)||(43747346-43747407)
chr3 (1276-1364)||(44624710-44624797)
chr3 (1335-1447)||(50802660-50802773)
chr3 (1335-1447)||(50873104-50873217)
chr3 (1276-1373)||(52008319-52008418)
chr3 (1196-1255)||(3192967-3193026)
chr3 (1277-1379)||(35359067-35359169)
chr3 (1293-1378)||(791477-791562)
chr3 (1194-1255)||(12759576-12759635)
chr3 (1194-1255)||(28204545-28204606)
chr3 (1276-1448)||(3192774-3192947)
chr3 (1194-1254)||(4474256-4474316)
chr3 (1194-1254)||(8024842-8024902)
chr3 (1194-1234)||(28712668-28712708)
chr3 (1194-1242)||(51315562-51315610)
chr3 (1276-1448)||(14340874-14341046)
chr3 (1303-1366)||(49787334-49787397)
chr3 (1286-1348)||(14992781-14992843)
chr3 (1337-1448)||(44127547-44127661)
chr3 (1209-1255)||(44624816-44624861)
chr3 (1286-1371)||(4474147-4474231)
chr3 (1336-1448)||(25902553-25902667)
chr3 (1194-1255)||(38958030-38958091)
chr3 (1194-1255)||(44585855-44585916)
chr3 (1278-1382)||(36567016-36567120)
chr3 (1290-1447)||(43586715-43586872)
chr3 (1197-1237)||(47189667-47189707)
chr3 (1194-1245)||(86758-86809)
chr3 (1196-1255)||(14992691-14992750)
chr3 (1194-1237)||(15978895-15978938)
chr3 (1194-1245)||(17773238-17773288)
chr3 (1194-1245)||(19074539-19074589)
chr3 (1402-1448)||(25248692-25248739)
chr3 (1351-1382)||(25248758-25248789)
chr3 (1194-1233)||(28712522-28712561)
chr3 (1337-1448)||(28712663-28712775)
chr3 (1278-1313)||(37182140-37182175)
chr3 (1194-1253)||(44436586-44436644)
chr3 (1194-1253)||(51315672-51315730)
chr3 (1276-1363)||(53184596-53184682)
chr3 (1336-1382)||(4474270-4474316)
chr3 (1209-1255)||(25248872-25248918)
chr3 (1337-1383)||(38958046-38958092)
chr3 (1278-1312)||(42230172-42230206)
chr3 (1278-1312)||(45744037-45744071)
chr3 (1402-1447)||(53020587-53020633)
chr3 (1194-1255)||(1814616-1814676)
chr3 (1194-1255)||(7218220-7218280)
chr3 (1400-1429)||(29512567-29512596)
chr3 (1278-1382)||(32508060-32508164)
chr3 (1334-1383)||(35359182-35359231)
chr3 (1276-1313)||(38511796-38511833)
chr3 (1194-1243)||(46226887-46226936)
chr3 (1297-1382)||(54716667-54716752)
[»] scaffold0062 (2 HSPs)
scaffold0062 (1289-1382)||(46228-46321)
scaffold0062 (1194-1237)||(46144-46187)
[»] chr7 (55 HSPs)
chr7 (1276-1445)||(36580415-36580585)
chr7 (1276-1445)||(18504246-18504417)
chr7 (1276-1448)||(35250119-35250292)
chr7 (1276-1448)||(28785895-28786071)
chr7 (1286-1448)||(17931880-17932040)
chr7 (1276-1448)||(41243644-41243816)
chr7 (1276-1382)||(29834291-29834397)
chr7 (1276-1444)||(21505758-21505927)
chr7 (1279-1383)||(6726398-6726501)
chr7 (1276-1448)||(15107132-15107303)
chr7 (1276-1445)||(18186591-18186763)
chr7 (1277-1447)||(28472391-28472560)
chr7 (1277-1383)||(4049775-4049882)
chr7 (1276-1448)||(15029058-15029234)
chr7 (1276-1383)||(36903330-36903436)
chr7 (1287-1383)||(15348018-15348113)
chr7 (1276-1448)||(20184916-20185090)
chr7 (1295-1446)||(47909696-47909848)
chr7 (1194-1255)||(4049907-4049968)
chr7 (1194-1255)||(5172709-5172770)
chr7 (1194-1257)||(20185100-20185163)
chr7 (1277-1367)||(8073957-8074047)
chr7 (1399-1448)||(36903531-36903581)
chr7 (1298-1383)||(3381929-3382013)
chr7 (1403-1448)||(14247569-14247614)
chr7 (1194-1255)||(15348143-15348203)
chr7 (1402-1448)||(42256582-42256630)
chr7 (1400-1448)||(12905791-12905839)
chr7 (1194-1254)||(18186507-18186567)
chr7 (1203-1255)||(35250305-35250357)
chr7 (1302-1370)||(45717978-45718046)
chr7 (1194-1245)||(28472574-28472624)
chr7 (1209-1255)||(18504426-18504472)
chr7 (1298-1429)||(28350307-28350436)
chr7 (1194-1255)||(36580341-36580401)
chr7 (1321-1448)||(28350116-28350245)
chr7 (1194-1237)||(10097623-10097665)
chr7 (1194-1237)||(14247361-14247404)
chr7 (1194-1253)||(15029129-15029187)
chr7 (1278-1313)||(16879373-16879408)
chr7 (1209-1240)||(19645003-19645034)
chr7 (1294-1373)||(20505147-20505226)
chr7 (1278-1325)||(38879286-38879333)
chr7 (1194-1237)||(41243846-41243889)
chr7 (1194-1233)||(45697560-45697599)
chr7 (1400-1445)||(6792061-6792107)
chr7 (1400-1448)||(3318318-3318367)
chr7 (1276-1313)||(3319179-3319216)
chr7 (1276-1373)||(5172588-5172685)
chr7 (1194-1255)||(15107060-15107120)
chr7 (1286-1367)||(19644885-19644966)
chr7 (1294-1363)||(23826106-23826175)
chr7 (1194-1255)||(28785825-28785886)
chr7 (1297-1382)||(36801761-36801846)
chr7 (1194-1255)||(40872234-40872295)
[»] chr5 (65 HSPs)
chr5 (1276-1448)||(27904623-27904797)
chr5 (1194-1448)||(32391786-32392033)
chr5 (1276-1448)||(12406180-12406354)
chr5 (1276-1448)||(3333841-3334015)
chr5 (1286-1381)||(2974702-2974797)
chr5 (1276-1448)||(25910721-25910897)
chr5 (1279-1445)||(18402989-18403157)
chr5 (1276-1448)||(35166297-35166469)
chr5 (1276-1447)||(43098167-43098337)
chr5 (1277-1383)||(40276170-40276276)
chr5 (1276-1445)||(31080480-31080650)
chr5 (1276-1383)||(9852853-9852960)
chr5 (1297-1383)||(19131661-19131747)
chr5 (1194-1255)||(19340828-19340889)
chr5 (1276-1448)||(22300601-22300774)
chr5 (1276-1363)||(26563075-26563162)
chr5 (1276-1448)||(36798170-36798344)
chr5 (1288-1446)||(37897870-37898029)
chr5 (1276-1382)||(20512264-20512370)
chr5 (1276-1446)||(20629884-20630057)
chr5 (1194-1255)||(40276086-40276147)
chr5 (1286-1448)||(25363825-25363989)
chr5 (1276-1367)||(28446087-28446178)
chr5 (1194-1255)||(21066525-21066586)
chr5 (1286-1383)||(30604237-30604334)
chr5 (1209-1255)||(6130337-6130383)
chr5 (1276-1382)||(16132812-16132918)
chr5 (1280-1445)||(24405493-24405659)
chr5 (1276-1382)||(26702504-26702609)
chr5 (1276-1382)||(26972237-26972342)
chr5 (1196-1254)||(36798362-36798420)
chr5 (1194-1255)||(3999153-3999214)
chr5 (1336-1448)||(12406041-12406154)
chr5 (1194-1255)||(12406109-12406169)
chr5 (1194-1255)||(28446190-28446250)
chr5 (1276-1368)||(3999238-3999330)
chr5 (1276-1368)||(19340904-19340996)
chr5 (1194-1253)||(9852854-9852912)
chr5 (1202-1257)||(9852969-9853023)
chr5 (1194-1245)||(30603680-30603731)
chr5 (1209-1255)||(3333774-3333820)
chr5 (1209-1255)||(22300797-22300843)
chr5 (1202-1255)||(2974818-2974871)
chr5 (1194-1243)||(20512396-20512445)
chr5 (1194-1255)||(31080666-31080726)
chr5 (1400-1448)||(36798441-36798490)
chr5 (1276-1447)||(24779276-24779447)
chr5 (1286-1374)||(34320097-34320185)
chr5 (1307-1383)||(35877356-35877431)
chr5 (1276-1447)||(39574240-39574409)
chr5 (1401-1448)||(40132904-40132952)
chr5 (1194-1253)||(3333889-3333947)
chr5 (1278-1313)||(4096588-4096623)
chr5 (1276-1339)||(6130398-6130461)
chr5 (1399-1445)||(8284158-8284205)
chr5 (1324-1383)||(9852973-9853032)
chr5 (1278-1313)||(10029213-10029248)
chr5 (1194-1237)||(35166496-35166539)
chr5 (1278-1313)||(35306843-35306878)
chr5 (1204-1255)||(39574423-39574474)
chr5 (1298-1368)||(40133071-40133140)
chr5 (1342-1383)||(31080686-31080727)
chr5 (1277-1314)||(31157043-31157080)
chr5 (1276-1313)||(34734212-34734249)
chr5 (1194-1255)||(35877465-35877526)
[»] chr4 (90 HSPs)
chr4 (1276-1448)||(2836899-2837073)
chr4 (1276-1448)||(44356538-44356710)
chr4 (1292-1448)||(8965672-8965824)
chr4 (1277-1448)||(53312286-53312460)
chr4 (1276-1373)||(43074728-43074825)
chr4 (1194-1448)||(10059751-10060013)
chr4 (1276-1448)||(14449424-14449599)
chr4 (1276-1448)||(20112290-20112463)
chr4 (1287-1448)||(2016791-2016954)
chr4 (1276-1382)||(29697590-29697695)
chr4 (1276-1448)||(1420684-1420858)
chr4 (1276-1448)||(52462928-52463101)
chr4 (1276-1379)||(4796180-4796283)
chr4 (1277-1448)||(23759715-23759887)
chr4 (1286-1445)||(47999533-47999693)
chr4 (1276-1427)||(53924891-53925042)
chr4 (1276-1445)||(27978695-27978865)
chr4 (1287-1383)||(51362606-51362702)
chr4 (1276-1446)||(21871527-21871696)
chr4 (1276-1446)||(21927388-21927557)
chr4 (1277-1367)||(51371546-51371636)
chr4 (1276-1448)||(25909487-25909661)
chr4 (1292-1383)||(2654125-2654216)
chr4 (1276-1448)||(12719585-12719760)
chr4 (1276-1369)||(34567756-34567849)
chr4 (1276-1383)||(16292335-16292442)
chr4 (1280-1368)||(21322855-21322943)
chr4 (1276-1445)||(50769366-50769537)
chr4 (1276-1383)||(21597542-21597649)
chr4 (1351-1445)||(2180780-2180874)
chr4 (1276-1445)||(6637203-6637373)
chr4 (1286-1383)||(11824256-11824351)
chr4 (1194-1255)||(42526032-42526093)
chr4 (1286-1383)||(54983983-54984080)
chr4 (1321-1448)||(14060888-14061017)
chr4 (1209-1257)||(21597484-21597532)
chr4 (1203-1255)||(43074665-43074717)
chr4 (1276-1383)||(26089537-26089643)
chr4 (1276-1383)||(31553382-31553489)
chr4 (1321-1383)||(6207359-6207421)
chr4 (1276-1446)||(8070630-8070799)
chr4 (1399-1448)||(19909173-19909223)
chr4 (1276-1448)||(54855304-54855477)
chr4 (1337-1447)||(21957668-21957780)
chr4 (1194-1255)||(35393854-35393915)
chr4 (1194-1255)||(53924814-53924874)
chr4 (1324-1448)||(2181313-2181438)
chr4 (1401-1444)||(14060760-14060804)
chr4 (1280-1448)||(21451459-21451627)
chr4 (1276-1328)||(42526103-42526155)
chr4 (1209-1255)||(6614928-6614972)
chr4 (1205-1255)||(1571593-1571643)
chr4 (1209-1255)||(2654037-2654083)
chr4 (1209-1255)||(3658110-3658156)
chr4 (1391-1448)||(4796036-4796094)
chr4 (1209-1255)||(21322790-21322836)
chr4 (1357-1446)||(1420537-1420627)
chr4 (1194-1255)||(2837085-2837146)
chr4 (1194-1255)||(6207244-6207305)
chr4 (1194-1255)||(8965588-8965648)
chr4 (1194-1243)||(16292465-16292514)
chr4 (1321-1381)||(3658021-3658081)
chr4 (1205-1237)||(4796114-4796146)
chr4 (1197-1237)||(18937311-18937351)
chr4 (1278-1313)||(5344407-5344442)
chr4 (1276-1354)||(6614984-6615060)
chr4 (1324-1383)||(8965587-8965646)
chr4 (1194-1237)||(11824399-11824442)
chr4 (1196-1255)||(20117969-20118028)
chr4 (1194-1257)||(23759628-23759690)
chr4 (1391-1445)||(29350885-29350940)
chr4 (1278-1382)||(37289523-37289627)
chr4 (1278-1313)||(44921751-44921786)
chr4 (1194-1245)||(49185754-49185805)
chr4 (1399-1446)||(49185823-49185870)
chr4 (1194-1237)||(51233680-51233723)
chr4 (1278-1313)||(51537757-51537792)
chr4 (1278-1313)||(51696673-51696708)
chr4 (1278-1313)||(54607024-54607059)
chr4 (1209-1255)||(2181311-2181356)
chr4 (1400-1446)||(35615433-35615479)
chr4 (1276-1354)||(49185665-49185743)
chr4 (1209-1255)||(50769549-50769594)
chr4 (1210-1255)||(14016919-14016964)
chr4 (1285-1366)||(20118052-20118133)
chr4 (1401-1445)||(20737500-20737545)
chr4 (1286-1382)||(26675121-26675217)
chr4 (1399-1447)||(35615315-35615364)
chr4 (1279-1383)||(51233547-51233651)
chr4 (1194-1255)||(52462846-52462907)
[»] chr2 (65 HSPs)
chr2 (1277-1448)||(14943686-14943857)
chr2 (1277-1445)||(2609230-2609399)
chr2 (1276-1383)||(37803190-37803296)
chr2 (1276-1448)||(34679097-34679271)
chr2 (1276-1448)||(39918434-39918608)
chr2 (1277-1448)||(5470478-5470649)
chr2 (1276-1383)||(37431610-37431717)
chr2 (1276-1448)||(43028794-43028967)
chr2 (1276-1448)||(14489214-14489387)
chr2 (1276-1368)||(27489514-27489606)
chr2 (1276-1382)||(44617879-44617985)
chr2 (1276-1368)||(24472587-24472679)
chr2 (1290-1382)||(25411609-25411701)
chr2 (1289-1379)||(5008441-5008531)
chr2 (1277-1448)||(6592724-6592899)
chr2 (1278-1448)||(25333499-25333670)
chr2 (1194-1448)||(31827525-31827779)
chr2 (1277-1383)||(34760914-34761020)
chr2 (1194-1255)||(8857233-8857293)
chr2 (1276-1448)||(4576683-4576854)
chr2 (1276-1383)||(4925506-4925613)
chr2 (1276-1367)||(8553684-8553774)
chr2 (1276-1382)||(8857114-8857220)
chr2 (1194-1255)||(4576611-4576671)
chr2 (1194-1255)||(39918627-39918688)
chr2 (1276-1448)||(41196370-41196539)
chr2 (1291-1383)||(32969624-32969716)
chr2 (1276-1383)||(18969234-18969341)
chr2 (1276-1367)||(24306159-24306250)
chr2 (1194-1244)||(6510196-6510246)
chr2 (1334-1383)||(25452-25501)
chr2 (1194-1255)||(19206208-19206269)
chr2 (1194-1243)||(34679290-34679339)
chr2 (1290-1383)||(35718712-35718805)
chr2 (1194-1255)||(35718842-35718902)
chr2 (1276-1367)||(5362315-5362407)
chr2 (1194-1237)||(4925650-4925692)
chr2 (1197-1255)||(19895685-19895741)
chr2 (1276-1367)||(19895754-19895845)
chr2 (1321-1383)||(16043207-16043269)
chr2 (1402-1448)||(24498106-24498152)
chr2 (1194-1244)||(37431734-37431784)
chr2 (1194-1255)||(5470395-5470455)
chr2 (1336-1414)||(6510200-6510278)
chr2 (1194-1255)||(6592920-6592980)
chr2 (1321-1382)||(16238407-16238468)
chr2 (1194-1255)||(18709312-18709373)
chr2 (1400-1448)||(19399440-19399489)
chr2 (1399-1448)||(21361881-21361930)
chr2 (1286-1363)||(25092382-25092459)
chr2 (1400-1448)||(36715559-36715608)
chr2 (1194-1255)||(43028979-43029040)
chr2 (1194-1237)||(14489415-14489458)
chr2 (1280-1367)||(18709399-18709486)
chr2 (1194-1237)||(32969728-32969771)
chr2 (1278-1313)||(40711478-40711513)
chr2 (1399-1448)||(16043089-16043139)
chr2 (1399-1448)||(25375137-25375187)
chr2 (1209-1255)||(27489621-27489667)
chr2 (1205-1255)||(37803317-37803366)
chr2 (1209-1255)||(44617814-44617859)
chr2 (1276-1313)||(2936928-2936965)
chr2 (1276-1329)||(19399317-19399370)
chr2 (1342-1448)||(24306016-24306122)
chr2 (1277-1330)||(36195720-36195773)
[»] scaffold0015 (3 HSPs)
scaffold0015 (1276-1383)||(76929-77035)
scaffold0015 (1194-1255)||(77046-77107)
scaffold0015 (1399-1448)||(77125-77175)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1280-1447)||(19915-20083)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1276-1445)||(9415-9585)
scaffold0328 (1194-1255)||(9606-9667)
[»] scaffold0809 (1 HSPs)
scaffold0809 (1280-1445)||(2905-3068)
[»] scaffold0578 (1 HSPs)
scaffold0578 (1289-1379)||(3146-3236)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1276-1429)||(145373-145527)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1194-1255)||(9618-9678)
[»] scaffold0067 (2 HSPs)
scaffold0067 (1194-1255)||(4199-4260)
scaffold0067 (1338-1383)||(4216-4261)
[»] scaffold0417 (2 HSPs)
scaffold0417 (1276-1348)||(9439-9511)
scaffold0417 (1198-1242)||(9534-9578)
[»] scaffold0372 (1 HSPs)
scaffold0372 (1280-1448)||(124-292)
[»] scaffold0025 (3 HSPs)
scaffold0025 (1399-1445)||(19605-19652)
scaffold0025 (1277-1383)||(19170-19276)
scaffold0025 (1194-1245)||(19107-19158)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1321-1368)||(203361-203408)
scaffold0016 (1194-1255)||(203256-203317)
[»] scaffold0166 (1 HSPs)
scaffold0166 (1276-1447)||(21659-21830)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1278-1313)||(79127-79162)
[»] scaffold0515 (1 HSPs)
scaffold0515 (1399-1448)||(3639-3689)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1399-1448)||(3639-3689)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1194-1255)||(93987-94048)


Alignment Details
Target: chr8 (Bit Score: 451; Significance: 0; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 552 - 1108
Target Start/End: Original strand, 39887891 - 39888451
Alignment:
Q  552 ggactgagttcatgtggatcggaatgaattttctcaattcaaattctttcaatttttacattttaactattaagtatgaaagagtgaaaagagattaaat 651  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39887891 ggactgagttcatgtggatcggaatgaattttctcaattcaaattctttcaattgttacattttaactattaagtatgaaagagtgaaaagagattaaat 39887990  T
Q  652 tatagagnnnnnnn-taaattaaaggagattgagtttaacaattgagatgtactaacaattaacaaatattgacaagatttt-atttgaaagaatctatt 749  Q
    |||||||        ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39887991 tatagagaaaaaaaataaagaaaaggagattgagtttaacaattgagatgtactaacaattaacaaatattgacaagatttttatttgaaagaatctatt 39888090  T
Q  750 tccgagattggcttgatacaagtcaagtaagagacaaaatctcaatacacatgtctttaacttgtttcatgcatagctataaatacatcaagtccttgaa 849  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39888091 tccgagattggcttgatacaagtcaagtgaaagacataatctcaatacacatgtctttaacttgtttcatgcatagctataaatacatcaagtccttgaa 39888190  T
Q  850 ttcccataaaattacactcctatatatttctttttcttataagcagatatactcatatacgagtatggtccggtgcaagttgtaattggtagtcactctt 949  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39888191 ttcccataaaattacactcctatatatttctttttcttataagcagatatactcatatatgagtatggtccggtgcaagttgtaattggtagtcactctt 39888290  T
Q  950 tctcttatctttaagggctatgc--nnnnnnnnnnctttaataattaagggatatgttatcgagcaatctaaagatgctagtaaatggatgttggagtca 1047  Q
    |||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39888291 tctcttatctttaagggctatgcttttttttttttctttaataattaagggatatgttatcgagcaatctaaagatgctagtaaatggatgttggagtca 39888390  T
Q  1048 acaacaattagtttagaacaattgtgcaatgttggattatattgaatttggtggactattt 1108  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39888391 acaccaattagtttagaacaattgtgcaatgttggattatattgaatttggtggactattt 39888451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 25 - 501
Target Start/End: Original strand, 39887389 - 39887840
Alignment:
Q  25 gtgtctgtaatgaataaagaaaacaaaaaagagtgtagtgtagggtggcatgttgaaaaacgctttgagttgagggtatcaatccggaaattgttcccga 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  39887389 gtgtctgtaatgaataaagaaaacaaaaaagagtgtagtgtagggtggcatgttgaaaaacgcgttgagttgagggtatgaatccggaaattgttcccga 39887488  T
Q  125 taaccgtagccgactgacaccgacacagggagggagtagcaccgtcgtatgactatgattggcagattgagtgatgacactcacctcactcatttccagc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39887489 taaccgtagccgactgacaccgacacagggagggagtagcaccgtcgtatgactatgattggcaga-tgagtgatgacactcacctcactcatttccagc 39887587  T
Q  225 ttaaacatcatgaatgaccagaccagcatggtgtagttgtacgtagtagtatgagttacattctaccacattaattaattaattaattactactacattg 324  Q
    |||||||||||||||     |||||||||||      ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  39887588 ttaaacatcatgaat-----gaccagcatgg------tgtacgtagtagtatgagttacattctaccac--------attaattaattactactacattg 39887668  T
Q  325 tttttatcaatctacgcgcaatgttgtcagaccctctccactccactccacatgatcatactaatcacttgctacttgccattcatgtgccattagtttt 424  Q
    |||||||||||||||||||||||||||||||||||     |||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  39887669 tttttatcaatctacgcgcaatgttgtcagaccct-----ctcctctccccatgatcatacaaatcacttgctacttgccattcatgtgccatcagtttt 39887763  T
Q  425 catcctactcattgcccaatcatttctttgcatttattatctatctacttctacccccatactacattcattacaca 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39887764 catcctactcattgcccaatcatttctttgcatttattatctatctacttctacccccatactacattcattacaca 39887840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 4e-79
Query Start/End: Original strand, 1194 - 1558
Target Start/End: Original strand, 39889838 - 39890197
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcacctcac 1293  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |                   || |||||  | |||||    
T  39889838 tacaaaatcgctccataagttttgcaactgtagcagttttggcctcccaagatcaatttttggtaaaaaaaaaaaa-------aaaacgtggtatctcac 39889930  T
Q  1294 ttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnn-ct 1392  Q
    |||| ||||||||||||||||||| | ||||||||||||||||| || ||||| || ||||||||||||||||||||||||| |||||||        ||    
T  39889931 ttagagtgtcacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacagatgcaaaacttagagggcggatttgtagttttttttct 39890030  T
Q  1393 tagagtgccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaagccnnnnnnnaatagaaaatattaatatgtaaattgtaatattgat 1491  Q
    ||||| |  |||||||||||||| |||| |||| || | ||||||||||||||||||       ||||||||||||||||| || |||||||||||||||    
T  39890031 tagagggtaaaaatcgcaactttaaaaaggttaaggagctaaaactgctattaagcctttttttaatagaaaatattaatacgttaattgtaatattgat 39890130  T
Q  1492 ttgaatataaacatttaacttatcaactcttttattacctttggtcaaaccaattgaatccaacccc 1558  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39890131 ttgaatataaacatttaacttatcaactcttttattacctttggtcaaaccaattgaatccaacccc 39890197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 5e-69
Query Start/End: Original strand, 1515 - 1652
Target Start/End: Original strand, 39890197 - 39890334
Alignment:
Q  1515 caactcttttattacctttggtcaaaccaattgaatccaaccccttttctatgatagttcaatgttaatggcggtcacatatactctctattacttgaag 1614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39890197 caactcttttattacctttggtcaaaccaattgaatccaaccccttttctatgatagttcaatgttaatggcggtcacatatactctctattacttgaag 39890296  T
Q  1615 ttttgcttctaaaacgacacattttcatggcaatcgac 1652  Q
    |||||||| |||||||||||||||||||||||||||||    
T  39890297 ttttgcttttaaaacgacacattttcatggcaatcgac 39890334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Original strand, 30539132 - 30539304
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||||||| ||||||||| || || |  ||||||||||||||||||| |||||||| |||||||||||||||||| || ||||    
T  30539132 aacacgtggcacctcacttagggtgccacgtcagcatagaccgaatcaaaattgacattgggggccaaaactgccacagatgcaaaacttaggggacggt 30539231  T
Q  1377 tttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    |||||||        ||||| |  |||||||||||||||||  ||||||| ||| ||||||||||||||||||    
T  30539232 tttgtagttttttttcttaggggaccaaaatcgcaactttgggaaagttaagggctaaaactgctattaagcc 30539304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 16982751 - 16982857
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||| ||||| |||||||||||| |||  |||||||||| | ||||||| |||||||| |||||||||||||||||| ||||||    
T  16982751 taacacgtggcacctcacttggggtgccacgtcagcgtagactaagtcaaaattggccttggggg-caaaactggcacagatgcaaaacttagggggcgg 16982849  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  16982850 ttttgtag 16982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1278 - 1448
Target Start/End: Original strand, 6807311 - 6807480
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtt 1377  Q
    ||||||| |||||||||||||||| |||||||||||| || | |||||||||||| ||| ||| |||||||| |||| ||||||||||||| ||| ||||    
T  6807311 acacgtggcacctcacttagggtgccacgtcagcgtagacagagtcaaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggtt 6807410  T
Q  1378 ttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctattaagcc 1448  Q
    ||||||        |||||| | |||||| |||||||||  |||||||||||  ||||| ||||||||||||    
T  6807411 ttgtagtttttt--ttagagggtcaaaattgcaactttgggaaagttaggggactaaaattgctattaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1277 - 1446
Target Start/End: Complemental strand, 29657877 - 29657702
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacatt-gggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||||| ||||||||||||||||||||||||| ||| || |  ||||||||||| || ||||| |||||||| |||| |||||||| |||| ||||||    
T  29657877 aacacgtggcacctcacttagggtgtcacgtcagtgtagaccgaatcaaaattgactttggggggccaaaactgccacatatgcaaaatttagggggcgg 29657778  T
Q  1376 ttttgtag----nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaag 1446  Q
    ||||||||           ||||||| ||||||||||||||||||| |||||||||| | ||||||| ||||||||    
T  29657777 ttttgtagttttttttcttcttagagggccaaaatcgcaactttgataaagttagggaggtaaaactcctattaag 29657702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 3676268 - 3676375
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||| || |||||||||||||||| |||||||||||| || | ||||||||||   ||||||  |||||||| |||||||||||||||||| ||||||    
T  3676268 taacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggttttggggaccaaaactgccacagatgcaaaacttagtgggcgg 3676367  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  3676368 ttttgtag 3676375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1292 - 1383
Target Start/End: Original strand, 37813247 - 37813338
Alignment:
Q  1292 acttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||| |||||||||||| || | |||||||||| | ||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  37813247 acttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 37813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 23702275 - 23702448
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| || ||||||||||||| || |||||| || |||| |||||||||||| |||| || ||||||||||||| ||||||||||||| || |      
T  23702275 taacacgtggcatctcacttagggtgccatgtcagcatagactgagtcaaaattgaccttggaggccaaaactgtcacaaatgcaaaacttaggggacaa 23702374  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||        ||||| | || ||||||||||||||   ||||||| |||| ||||||||||||||||||    
T  23702375 ttttgtaatttttttcttagggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcc 23702448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1280 - 1383
Target Start/End: Complemental strand, 21486824 - 21486721
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| ||||||||||||||||||||||||||||| ||   |||||||||||  |||| || ||||| || ||||| |||||||||||| ||||||||||    
T  21486824 acgtgacacctcacttagggtgtcacgtcagcgtagaccaagtcaaaattgatcttggaggccaaaaatgccacaggtgcaaaacttagggggcggtttt 21486725  T
Q  1380 gtag 1383  Q
    ||||    
T  21486724 gtag 21486721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 45177375 - 45177201
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| |||||||| ||| || | |||||||||  | ||| ||| ||||||||||||||||||||||||||| || ||     
T  45177375 taacatgtgacacctcacttagggtgccacgtcagtgtagaccgagtcaaaattagccttgagggccaaaactgtcacagatgcaaaacttaggggacga 45177276  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
    ||||||||        ||||| |   ||||||||||||||||| ||||||||| || |||| |||||||||||||    
T  45177275 ttttgtagttttttttcttaggggatcaaaatcgcaactttgagaaagttaggaggctaaatctgctattaagcc 45177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1286 - 1445
Target Start/End: Original strand, 41487360 - 41487520
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-n 1384  Q
    |||||||||||| |||||||||||||||| || | ||||||||||   ||||||| |||||| |  |||| |||||||||||| ||||||||||||||      
T  41487360 cacctcacttagcgtgtcacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcggttttgtagtt 41487459  T
Q  1385 nnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaa 1445  Q
          |||| || || ||||||||||||||| ||||||||| ||| |||||||||||||||    
T  41487460 ttttttctta-agggctaaaatcgcaactttggaaaagttagagggctaaaactgctattaa 41487520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1287 - 1446
Target Start/End: Complemental strand, 26823989 - 26823828
Alignment:
Q  1287 acctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nn 1385  Q
    ||||||||||||||||||||||| | || | ||  ||||||||| ||||||||  |||||||| |||| ||||||||||||| ||| | ||||||||       
T  26823989 acctcacttagggtgtcacgtcaacctagattgaatcaaaattggcattggggcccaaaactgccacaaatgcaaaacttagggggtgattttgtagttt 26823890  T
Q  1386 nnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaag 1446  Q
         ||||  | | |||||||| |||||||| |||||||| ||||||||||||||||||||    
T  26823889 tttttcttaaggggtcaaaatcgtaactttgagaaagttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1286 - 1448
Target Start/End: Original strand, 32071165 - 32071325
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnn 1385  Q
    ||||||||||| ||||  | ||||||||| || | ||||||||||   |||| |  ||||||||||| | ||||||||||||| ||||||||||||||      
T  32071165 cacctcacttaaggtgatatgtcagcgtagaccgagtcaaaattgttcttggagaccaaaactgtcatatatgcaaaacttagggggcggttttgtagtt 32071264  T
Q  1386 nnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
         ||||| | | |||||||||||||||  |||||||||||| ||||||||||||||||||    
T  32071265 tttt-cttaggg-gtcaaaatcgcaactttagaaaagttaggggctaaaactgctattaagcc 32071325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1194 - 1252
Target Start/End: Original strand, 41487268 - 41487326
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaattt 1252  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| ||||||    
T  41487268 tacaaaaccgccccctaagttttgcaactgtagcagttttggccgcccaaggccaattt 41487326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 45177454 - 45177393
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  45177454 tacaaaactgccccataagttttgcaactgtagtagttttggcctcccaaagccaatttttg 45177393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Complemental strand, 25144116 - 25144024
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||| ||| ||| ||||||||||||  |||||||||||||| | |||||||||| | ||||  | |||||||| ||||||||||||||||||    
T  25144116 taacatgtggcacatcacttagggtgcaacgtcagcgtaaaccgagtcaaaattggctttggatgccaaaactgccacagatgcaaaacttag 25144024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Original strand, 29044687 - 29044778
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    |||| |||| ||||||| |||||||  |||||||||||| || | |||||||||| | ||||||| |||||||| |||| ||||||||||||    
T  29044687 taacgcgtggcacctcatttagggtaccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaactta 29044778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1288 - 1383
Target Start/End: Original strand, 41567087 - 41567182
Alignment:
Q  1288 cctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||| ||| |||||||||||||| || || | ||||||||| |||||| |||| |||||||| |||||||||||| |||| || | |||||||||    
T  41567087 cctcatttaaggtgtcacgtcagcatagaccgagtcaaaattaacattgagggttaaaactgtgacagatgcaaaatttaggggactgttttgtag 41567182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 30539056 - 30539117
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||  ||||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  30539056 tacaaaactgccccctaagttttacaactgtagcagttttggccccccaaggccaatttttg 30539117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1321 - 1446
Target Start/End: Original strand, 42218429 - 42218555
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactt-tgaaa 1419  Q
    |||||||||||| | |||||||||||||| ||| |  ||||||||||| || |||||||||||       |||| |||| |||||||||||||| | |||    
T  42218429 gtcaaaattgacctagggggtcaaaactgccactggggcaaaacttaggggacggttttgtagtttttttcttatagtgtcaaaatcgcaacttcttaaa 42218528  T
Q  1420 aagttaggggttaaaactgctattaag 1446  Q
    |  | | ||||||||||||||||||||    
T  42218529 acttaaagggttaaaactgctattaag 42218555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1401 - 1448
Target Start/End: Original strand, 36688263 - 36688311
Alignment:
Q  1401 caaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  36688263 caaaatcacaactttgaaaaagttagggggttaaaactgctattaagcc 36688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Complemental strand, 20853549 - 20853378
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| ||||||| || ||||| ||||||| |||| |     ||||||||||  ||||||| |||||||| |||| ||||||||||||| ||| |||    
T  20853549 aacacgtggcacctcattttgggtgccacgtcaacgtagatctattcaaaattgatcttgggggccaaaactgccacatatgcaaaacttagggggtggt 20853450  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||        |||| | | ||||||||||||||  | ||||||| |||| ||||||||||||||||||    
T  20853449 tttgtagttttttt-ttagggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcc 20853378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1399 - 1445
Target Start/End: Complemental strand, 25897040 - 25896993
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  25897040 gccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1277 - 1368
Target Start/End: Complemental strand, 27545512 - 27545422
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    |||||||| |||||||||||||||| |||||||||||| |  | || ||||||| | || |||| |||||||| || |||||||||||||||    
T  27545512 aacacgtggcacctcacttagggtgccacgtcagcgtagatcgagttaaaattggc-tttggggccaaaactgccatagatgcaaaacttag 27545422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Original strand, 22192439 - 22192545
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||||||| ||| | |||||| || | |||||||||||| ||||  | |||||| |  |||| ||||||||||||  | ||||    
T  22192439 aacacgtgacacctcacttagggtgccacataagcgtagaccgagtcaaaattgaccttggcagccaaaacggctacagttgcaaaacttaggagacggt 22192538  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  22192539 tttgtag 22192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1277 - 1367
Target Start/End: Complemental strand, 22846616 - 22846526
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    |||||||| |||||||||||||||| || ||||||||| ||    ||||||||| | ||| ||| |||||||| || ||||||||||||||    
T  22846616 aacacgtggcacctcacttagggtgccatgtcagcgtagaccaattcaaaattgcccttgagggccaaaactgccaaagatgcaaaactta 22846526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1278 - 1367
Target Start/End: Complemental strand, 33298511 - 33298422
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaatt-gacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||||| |||||||||||||||| |||||||||||| || |  |||||||| ||| ||||| | |||||||| ||||||||| |||||||    
T  33298511 acacgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattagac-ttgggagccaaaactgccacagatgccaaactta 33298422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 44101372 - 44101418
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||| |||||||||||||||||||||  |||||||||    
T  44101372 taagttttgcaactttagcagttttggcctcccaagaccaatttttg 44101418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1276 - 1373
Target Start/End: Complemental strand, 29790931 - 29790834
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggc 1373  Q
    ||||| ||| ||| |||| ||||||| |||||||||||| ||   |||||||||||| | ||||  |||||||| ||||  |||||||||||||||||    
T  29790931 taacatgtgacacttcacatagggtgccacgtcagcgtagaccaagtcaaaattgacctcggggaccaaaactgccacatgtgcaaaacttagagggc 29790834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1209 - 1245
Target Start/End: Original strand, 17070989 - 17071025
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17070989 taagttttgcaactgtagcagttttggccccccaagg 17071025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1209 - 1245
Target Start/End: Complemental strand, 17577283 - 17577247
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17577283 taagttttgcaactgtagcagttttggccccccaagg 17577247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1194 - 1254
Target Start/End: Original strand, 23702194 - 23702253
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaattttt 1254  Q
    ||||||| |||||| |||||||||||||||||| |||||||| | ||||||| ||||||||    
T  23702194 tacaaaaccgcccc-taagttttgcaactgtagtagttttggtcccccaaggccaattttt 23702253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1194 - 1238
Target Start/End: Original strand, 44269189 - 44269233
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcct 1238  Q
    ||||||||| |||| |||||||||||||||||| |||||||||||    
T  44269189 tacaaaatcaccccctaagttttgcaactgtagtagttttggcct 44269233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1299 - 1382
Target Start/End: Original strand, 5916759 - 5916842
Alignment:
Q  1299 gtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    |||||||||||||||  |||| |||||||||||| | | ||| |||||||| || |||| ||| || |||||||| ||||||||    
T  5916759 gtgtcacgtcagcgttgactgagtcaaaattgacttagagggccaaaactgccaaagatccaatacatagagggctgttttgta 5916842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 8287745 - 8287780
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8287745 acacgtggcacctcacttagggtgtcacgtcagcgt 8287780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Complemental strand, 9762374 - 9762283
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||| ||| ||||||| |||  ||| |||||||||||| || |  |||||||||| ||||| || |||||||| || ||||||||||||||    
T  9762374 taacatgtggcacctcatttaatgtgccacgtcagcgtagacagaatcaaaattgatattggaggccaaaactgccaaagatgcaaaactta 9762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1402 - 1448
Target Start/End: Original strand, 22846709 - 22846756
Alignment:
Q  1402 aaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  22846709 aaaatcacaactttaaaaaagttaaggggttaaaactgctattaagcc 22846756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 37205682 - 37205717
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37205682 acacgtggcacctcacttagggtgtcacgtcagcgt 37205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Complemental strand, 37813337 - 37813279
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||| ||||||| |||||||    
T  37813337 tacaaaaccgccccctaagttttgcatctgtggcagttttggcc-cccaaggccaatttt 37813279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 41487456 - 41487413
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||    
T  41487456 tacaaaaccgccccctaagttttgcaactgtagctgttttggcc 41487413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 44101535 - 44101492
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||    
T  44101535 tacaaaatcaccccttaagttttgcatctgtagcagttttggcc 44101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1290 - 1368
Target Start/End: Complemental strand, 14880495 - 14880417
Alignment:
Q  1290 tcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||| || ||||||||| || || | |||||||| | | ||||||| |||||||| ||||||||||||| ||||    
T  14880495 tcacttaggatgccacgtcagcatagaccgagtcaaaatcggccttgggggccaaaactgccacagatgcaaaatttag 14880417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1276 - 1314
Target Start/End: Original strand, 17071047 - 17071085
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgta 1314  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  17071047 taacacgtggcacctcacttagggtgccacgtcagcgta 17071085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1321 - 1383
Target Start/End: Original strand, 17071807 - 17071867
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||| ||||||   ||||||||||||| |||||||||||| ||||||||||||||    
T  17071807 gtcaaaattgaccttggggca-aaaactgtcacaggtgcaaaacttag-gggcggttttgtag 17071867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1321 - 1383
Target Start/End: Complemental strand, 17576466 - 17576406
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||| ||||||   ||||||||||||| |||||||||||| ||||||||||||||    
T  17576466 gtcaaaattgaccttggggca-aaaactgtcacaggtgcaaaacttag-gggcggttttgtag 17576406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1276 - 1314
Target Start/End: Complemental strand, 17577225 - 17577187
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgta 1314  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  17577225 taacacgtggcacctcacttagggtgccacgtcagcgta 17577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1392 - 1445
Target Start/End: Original strand, 20699450 - 20699504
Alignment:
Q  1392 ttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    |||||||  |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  20699450 ttagagtatcaaaattgcaactttaaaaaagttagggggttaaaactgctattaa 20699504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 25144189 - 25144128
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| | |||| |||||||||||| ||| ||| |||||||| ||||||| |||||||||    
T  25144189 tacaaaaccaccccctaagttttgcaattgttgcaattttggccccccaaggccaatttttg 25144128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1391 - 1444
Target Start/End: Original strand, 26824088 - 26824141
Alignment:
Q  1391 cttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctatta 1444  Q
    ||||||| | |||||||||||||| |  |||||||||||| |||||||||||||    
T  26824088 cttagagggtcaaaatcgcaacttcgtgaaagttaggggtgaaaactgctatta 26824141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1203 - 1240
Target Start/End: Complemental strand, 29657938 - 29657901
Alignment:
Q  1203 gccccataagttttgcaactgtagcagttttggcctcc 1240  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  29657938 gccccttaagttttgcaactgtagccgttttggcctcc 29657901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1243
Target Start/End: Original strand, 35213096 - 35213145
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaa 1243  Q
    |||||||  ||||| ||||||||||||||||| ||||||||||| |||||    
T  35213096 tacaaaactgccccttaagttttgcaactgtaacagttttggccccccaa 35213145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 9e-37; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 9e-37
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 33399958 - 33399786
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||| |||||||||||| |||||||||||| || | |||||||||||| || |||| |||||||| |||| ||| ||||||||| |  |||    
T  33399958 taacacgtgacacatcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttaggggccaaaactgccacaaatgtaaaacttagggtccgg 33399859  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||||       ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33399858 ttttgtagtttttttcttagagggccaaaatcgcaactttggaaaagttaggggctaaaactgctattaagcc 33399786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 1276 - 1447
Target Start/End: Original strand, 6036800 - 6036971
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||||||||||||| |||||   |||||||||| | |||||||||||||||| |||| ||||||||||||| || | |    
T  6036800 taacatgtggcacctcacttagggtgtcacgtcagcataaaccaagtcaaaattggctttgggggtcaaaactgccacatatgcaaaacttaggggacag 6036899  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagc 1447  Q
    ||||||||       |||||   |||||||||||||||||  |||||||||||| |||||||||||||||||    
T  6036900 ttttgtagttttcttcttaggaggccaaaatcgcaactttagaaaagttaggggctaaaactgctattaagc 6036971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 30349522 - 30349349
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| ||||||| |||| || | |||| ||||| | |||||||||||||||  |||||||||||||||||  ||||||    
T  30349522 taacatgtggcacctcacttagggtgccacgtcaacgtagaccgagtcataattggccttgggggtcaaaactaccacagatgcaaaacttaaggggcgg 30349423  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    ||||||||       ||||| |   ||||||||||||||||  |||||||| ||| ||||||||||||||||||    
T  30349422 ttttgtagtttttttcttaggggctcaaaatcgcaactttgggaaagttagagggctaaaactgctattaagcc 30349349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1276 - 1446
Target Start/End: Original strand, 266252 - 266420
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||||| ||||||||||||||| || |  |||||||||   || |||| |||||||| ||||| |||||||||||  ||||||    
T  266252 taacacgtgacacctcacttaggatgtcacgtcagcgtagaccgaatcaaaattg-gttttggggccaaaactgccacaggtgcaaaacttaaggggcgg 266350  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaag 1446  Q
    |||||||        ||||| |  |||||||||||| ||||| |||||||||||||||||||| |||||||    
T  266351 ttttgtaatttttttcttag-gacccaaaatcgcaattttgagaaagttaggggttaaaactgatattaag 266420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1278 - 1383
Target Start/End: Original strand, 26311546 - 26311651
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtt 1377  Q
    ||||||| ||||||||||||| || |||||||||||| || | |||||||||||| ||||||| |||||||| |||| ||||||||||||  ||| ||||    
T  26311546 acacgtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttaaggggtggtt 26311645  T
Q  1378 ttgtag 1383  Q
    ||||||    
T  26311646 ttgtag 26311651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1289 - 1444
Target Start/End: Original strand, 10727347 - 10727504
Alignment:
Q  1289 ctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nnnn 1387  Q
    ||||||||||||  |||||||||||| |    |||||||||| | ||||||| |||||||| |||||||||||||||||| ||||||||||||||         
T  10727347 ctcacttagggtcccacgtcagcgtagatcaagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttt 10727446  T
Q  1388 nnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctatta 1444  Q
       ||||| | ||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  10727447 tttcttagggggccaaaatcacaactttggaaaagttagggggctaaaactgctatta 10727504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1303 - 1448
Target Start/End: Original strand, 2853582 - 2853730
Alignment:
Q  1303 cacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nnnnnnnctta-gagtgc 1400  Q
    |||||||||||| | || |||||||||| | ||||||| |||||||| |||| ||| ||||||||| ||||||||||||||        |||| | | ||    
T  2853582 cacgtcagcgtagaatgagtcaaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggttttgtagttttttttcttaggggggc 2853681  T
Q  1401 caaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  2853682 caaaattgcaactttgagaaagttaggaggttaaaactgctattaagcc 2853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Original strand, 18031082 - 18031250
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| |||||||||||| ||   |||||||||||  ||| ||| ||||||| ||||| || |||||||||  || |||    
T  18031082 taacaagtgacacctcacttagggtgccacgtcagcgtagaccaagtcaaaattgatcttgagggccaaaactatcacaaatacaaaacttaagggacgg 18031181  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaa 1445  Q
    ||||||||       |||| ||  |||||||  ||||||| ||||||||||||||||||||| |||||||    
T  18031182 ttttgtag-ttttttcttaaaggaccaaaattccaactttaaaaaagttaggggttaaaactactattaa 18031250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1287 - 1448
Target Start/End: Complemental strand, 17248799 - 17248636
Alignment:
Q  1287 acctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nn 1385  Q
    ||||||||||||||| ||||||| |||| || |  |||||||||   ||  ||| |||||||||| ||||||||||||||||||||||||||||  |       
T  17248799 acctcacttagggtgccacgtcaacgtagaccgaatcaaaattggtcttaagggccaaaactgtcgcagatgcaaaacttagagggcggttttgaggttt 17248700  T
Q  1386 nnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
         |||||||   ||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  17248699 tttttcttagaggatcaaaatcgcaactttaaaaaagttaggaggctaaaactgctattaagcc 17248636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1276 - 1373
Target Start/End: Original strand, 5003219 - 5003316
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggc 1373  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||   || ||||||||||||||| | |||||||| ||||  |||||||||||| ||||    
T  5003219 taacatgtgacacctcacttagggtgtcacgtcagcgtagaccaagttaaaattgacattgggagccaaaactgccacaattgcaaaacttagggggc 5003316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1194 - 1257
Target Start/End: Complemental strand, 12766461 - 12766399
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgat 1257  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  12766461 tacaaaaccgccccttaagttttgcaactgtagcagttttggcc-cccaaggccaatttttgat 12766399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1280 - 1383
Target Start/End: Original strand, 20474849 - 20474951
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| |||||||| |||  || ||||||| |||| || | ||||| |||||||||||||| |||||||| |||||||||||||||||| |||| |||||    
T  20474849 acgtggcacctcacatagactgccacgtcaacgtataccgagtcaacattgacattgggggccaaaactgccacagatgcaaaacttagggggc-gtttt 20474947  T
Q  1380 gtag 1383  Q
    ||||    
T  20474948 gtag 20474951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Complemental strand, 32143432 - 32143261
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||| ||| ||| ||| |||| || | ||||||||||   ||||||| |||||||| ||||| |||||||||||  ||||||    
T  32143432 taacatgtgccacctcacttagagtgccacatcaacgtagaccgagtcaaaattggtcttgggggccaaaactgccacaggtgcaaaacttaaggggcgg 32143333  T
Q  1376 ttttgta---gnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaa 1445  Q
    |||||||           |||||||   ||||||||||||||||||||||||||||| |||| ||||||||||    
T  32143332 ttttgtaattttttttctcttagag-atcaaaatcgcaactttgaaaaagttaggggctaaatctgctattaa 32143261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1279 - 1382
Target Start/End: Complemental strand, 26601631 - 26601528
Alignment:
Q  1279 cacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttt 1378  Q
    |||||| ||||||||| ||||||  || |||||||| || | ||||||||||   ||||||  |||| |||||||||||||||||||||| ||| |||||    
T  26601631 cacgtgacacctcactaagggtgctacatcagcgtagaccgagtcaaaattggtcttggggaccaaagctgtcacagatgcaaaacttagggggtggttt 26601532  T
Q  1379 tgta 1382  Q
    ||||    
T  26601531 tgta 26601528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1286 - 1368
Target Start/End: Complemental strand, 3812903 - 3812822
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    |||||||||||||||| |||||||||||| || ||||||||||||   || |||| |||||||| |||| |||||||||||||    
T  3812903 cacctcacttagggtgccacgtcagcgtagaccgggtcaaaattggtctt-ggggccaaaactgccacatatgcaaaacttag 3812822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 10727273 - 10727319
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  10727273 taagttttgcaactgtagcagttttggccccccaaggccaatttttg 10727319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 2840857 - 2840918
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||| |||||||||||| |||||||||||||||| ||||| |||||||||||    
T  2840857 tacaaaaccgtcccctaagttttgcaattgtagcagttttggccccccaatgtcaatttttg 2840918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1280 - 1339
Target Start/End: Complemental strand, 11351805 - 11351746
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggg 1339  Q
    ||||| |||||||||||||||| |||||||||||| || | |||||||||| ||||||||    
T  11351805 acgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggg 11351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 28011372 - 28011329
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| |||||| |||||||||||||||||||||||||||||    
T  28011372 tacaaaaccgccccttaagttttgcaactgtagcagttttggcc 28011329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1286 - 1445
Target Start/End: Original strand, 239095 - 239256
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagaggg--cggttttgtag 1383  Q
    |||||||||||||||| |||||||||||| || |  ||||||||| | ||||| | ||||||||  |||| ||| |||||||  |||  || ||||||||    
T  239095 cacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggccttgggtgccaaaactgcaacaggtgctaaacttatgggggacgattttgtag 239194  T
Q  1384 nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
           ||||| |  ||||| |||||||||||| ||||||| ||||||||||||||||||||    
T  239195 tttttttcttaggggaccaaa-tcgcaactttgagaaagttagggggttaaaactgctattaa 239256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1194 - 1252
Target Start/End: Original strand, 18031002 - 18031059
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaattt 1252  Q
    |||||||||||||| |||||||||||||||||||| |||||||  ||||| ||||||||    
T  18031002 tacaaaatcgcccc-taagttttgcaactgtagcaattttggctccccaaagtcaattt 18031059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Original strand, 30349620 - 30349670
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctattaagcc 1448  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  30349620 gccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcc 30349670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 33401286 - 33401240
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||    
T  33401286 taagttttgcaactgtagcagttttggccccccaagaccaatttttg 33401240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 2853495 - 2853555
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||| ||||||||||||||||||||||||||| | ||||||| |||||||||    
T  2853495 tacaaaaccgtcccctaagttttgcaactgtagcagttttggtc-cccaaggccaatttttg 2853555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 30349601 - 30349541
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||| | |||||||||||||||||||||||||| || | ||||||| |||||||||    
T  30349601 tacaaaatcgtctcataagttttgcaactgtagcagtttcggtc-cccaaggccaatttttg 30349541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1194 - 1234
Target Start/End: Original strand, 266189 - 266229
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttg 1234  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  266189 tacaaaattgccccttaagttttgcaactgtagcagttttg 266229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1401 - 1448
Target Start/End: Original strand, 2203416 - 2203464
Alignment:
Q  1401 caaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagcc 1448  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  2203416 caaagtcgcaactttgaaaaagttaaggagttaaaactgctattaagcc 2203464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Original strand, 238995 - 239038
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  238995 tacaaaatcgtcccctaagttttgcaaccgtagcagttttggcc 239038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1402 - 1448
Target Start/End: Original strand, 2841079 - 2841126
Alignment:
Q  1402 aaaatcgcaactttgaaaaagttaggggt-taaaactgctattaagcc 1448  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  2841079 aaaagcgcaattttgaaaaagttaggggtctaaaactgctattaagcc 2841126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Original strand, 3579662 - 3579705
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||    
T  3579662 tacaaaaccgccccctaagttttgcaactgtagcacttttggcc 3579705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Complemental strand, 10727440 - 10727382
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||| ||||||| |||||||    
T  10727440 tacaaaaccgccccctaagttttgcatctgtggcagttttggcc-cccaaggccaatttt 10727382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 12256936 - 12256901
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  12256936 acacgtggcacctcacttagggtgtcacgtcagcgt 12256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 17532424 - 17532318
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||| ||||| || |||| |||| || | ||||||| || | || |||| |||||||| ||||| |||||||||||  ||||||    
T  17532424 taacatgtggcacctcactt-gggtgccatgtcatcgtagaccgagtcaaaactggctttaggggccaaaactgccacaggtgcaaaacttaaggggcgg 17532326  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  17532325 ttttgtag 17532318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1195 - 1253
Target Start/End: Complemental strand, 5003324 - 5003267
Alignment:
Q  1195 acaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| ||||| |||||||||||| ||| |||||||||| ||||||| |||||||||    
T  5003324 acaaaattgccccctaagttttgcaattgtggcagttttgg-ctcccaatgtcaatttt 5003267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1194 - 1244
Target Start/End: Complemental strand, 32143497 - 32143447
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaag 1244  Q
    |||||||| ||||  ||||||||||||||||||||||| ||||| ||||||    
T  32143497 tacaaaattgccctctaagttttgcaactgtagcagttctggccccccaag 32143447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 3e-33; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 1279 - 1447
Target Start/End: Original strand, 16874646 - 16874816
Alignment:
Q  1279 cacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttt 1378  Q
    |||||| |||||||||||||||| |||||||||||| || | |||||||||| | ||||| | |||||||| |||||||||||||||||  |||||||||    
T  16874646 cacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggttt 16874745  T
Q  1379 tgtagnnnnnnncttagagtg-ccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagc 1447  Q
    |||||       ||||||| | ||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  16874746 tgtagtttttttcttagagggtccaaaattgcaactttgagaaagttagggggttaaaactgctattaagc 16874816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 1286 - 1448
Target Start/End: Complemental strand, 3377665 - 3377501
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-n 1384  Q
    |||||||||||||| |||||||||||||| || | |||||||||| | ||||||| |||||||| |||| ||||||||||||| ||||||||||||||      
T  3377665 cacctcacttagggcgtcacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtt 3377566  T
Q  1385 nnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
          ||||| | |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  3377565 ttttttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 3377501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 1280 - 1448
Target Start/End: Complemental strand, 45739105 - 45738936
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| |||||||||||||||| ||||| ||| || || | |||||||||||| ||||||| |||||||| || ||||||||||||||  ||||||||||    
T  45739105 acgtggcacctcacttagggtgccacgttagcatagaccgagtcaaaattgactttgggggccaaaactgccatagatgcaaaacttaaggggcggtttt 45739006  T
Q  1380 gtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaagcc 1448  Q
    ||||       ||||| | | ||||||| ||||||||| |||||||||| ||||||| ||||||||||||    
T  45739005 gtagttttttccttagggggtcaaaatcacaactttgagaaagttagggagttaaaattgctattaagcc 45738936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1288 - 1445
Target Start/End: Original strand, 8301497 - 8301655
Alignment:
Q  1288 cctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nnn 1386  Q
    ||||| ||||||||||||||||||||| | || ||||||||||   |||||||||||||||| ||||||||||||| |||| || |||||||||||        
T  8301497 cctcaattagggtgtcacgtcagcgtagattgagtcaaaattggtcttgggggtcaaaactgccacagatgcaaaatttaggggacggttttgtagtttt 8301596  T
Q  1387 nnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaa 1445  Q
        ||||||| | |||||| | ||||||| |||| ||||||| |||||||||||||||    
T  8301597 tattcttagagggtcaaaattgaaactttggaaaaattaggggctaaaactgctattaa 8301655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1287 - 1446
Target Start/End: Complemental strand, 1096630 - 1096469
Alignment:
Q  1287 acctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttg-tagnn 1385  Q
    |||||||||||| || |||||||||||| || | ||||||||||||  | |||| |||||||| ||||||||| |||||||||||||||||||| |||      
T  1096630 acctcacttaggatgccacgtcagcgtagaccgagtcaaaattgaccctaggggccaaaactgccacagatgcgaaacttagagggcggttttgttagtt 1096531  T
Q  1386 nnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaag 1446  Q
          |||| |  ||||||||||||||||| ||||||| ||||| |||||||| |||||||    
T  1096530 ttttttttaggggaccaaaatcgcaactttggaaaagttaaggggctaaaactgttattaag 1096469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1277 - 1372
Target Start/End: Original strand, 46912332 - 46912427
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagaggg 1372  Q
    |||||||| ||||||| |||||||| ||||||||||||||| | |||||||||| |||| |||| |||||||| || |||||||||||||| ||||    
T  46912332 aacacgtggcacctcatttagggtgccacgtcagcgtaaacagagtcaaaattggcattaggggccaaaactgccatagatgcaaaacttaaaggg 46912427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Original strand, 39642349 - 39642455
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| ||| |||||||||||| | ||||||| || || | |||||||||| | ||||||| |||||||| |||| ||||||||||||| |||||||    
T  39642349 aacacgtggcacttcacttagggtgccgcgtcagcatagaccgagtcaaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggt 39642448  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  39642449 tttgtag 39642455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1197 - 1382
Target Start/End: Complemental strand, 44672555 - 44672380
Alignment:
Q  1197 aaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcacctcactta 1296  Q
    |||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||| |                  ||||||||| ||| |||||||    
T  44672555 aaaatcgccccacaaatttttcaactgtagcagttttggccccccaaggtcaatttttggt----------aaaaaaaataacacgtggcacttcactta 44672466  T
Q  1297 gggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||| |||||||||||| || |  ||||||||||  ||||| | |||||||| |||| ||||||||||||| |||||||||||||    
T  44672465 gggtgccacgtcagcgtagaccgaatcaaaattgatcttgggcgccaaaactgccacatatgcaaaacttagggggcggttttgta 44672380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1276 - 1373
Target Start/End: Original strand, 16298197 - 16298294
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggc 1373  Q
    ||||||||| |||||||||||| |||||||||||||||| ||   ||||||||||| |||||| | |||||||| |||||||||||||| ||| ||||    
T  16298197 taacacgtggcacctcacttagagtgtcacgtcagcgtagaccaagtcaaaattgatattgggagccaaaactgccacagatgcaaaacatagggggc 16298294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 17760858 - 17760682
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| |||||||| |||||||| ||| || | |||||||||||  |||| || |||||||| |||| ||||||||||||| ||| ||    
T  17760858 taacacgtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattgatcttggtggccaaaactgccacatatgcaaaacttagggggtgg 17760759  T
Q  1376 ttttgtag---nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||          ||||| | |||||||||||||||||||  |||||| |||| |||| |||||||||||||    
T  17760758 ttttgtagttttttttttcttagggggccaaaatcgcaactttgaggaagttagggggctaaagctgctattaagcc 17760682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1379
Target Start/End: Complemental strand, 25486387 - 25486285
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| |||||||| |||||||||||| || | |||||||||||  || |||| |||||| | ||||||||||||||||||||||||     
T  25486387 taacacgtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaattgaacttaggggccaaaac-gccacagatgcaaaacttagagggcga 25486289  T
Q  1376 tttt 1379  Q
    ||||    
T  25486288 tttt 25486285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 30849370 - 30849477
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||||||||| |||||||| || ||   || ||||||| | ||| ||| ||||||| ||||||||||||||||||| || |||    
T  30849370 taacacgtggcacctcacttagggtgttacgtcagcatagaccaagttaaaattggccttgtgggccaaaactatcacagatgcaaaacttaggggacgg 30849469  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  30849470 ttttgtag 30849477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1363
Target Start/End: Complemental strand, 48319577 - 48319490
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaa 1363  Q
    ||||||||| ||||||||||||| || |||||||||||  |  | |||||||||||| ||||||||||||||||||| ||||||||||    
T  48319577 taacacgtggcacctcacttaggatgccacgtcagcgttgatagagtcaaaattgaccttgggggtcaaaactgtcatagatgcaaaa 48319490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1429
Target Start/End: Original strand, 49426133 - 49426284
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||   |||||||||| |||| |||| |||||||| |||| ||||||||||||  |  | |    
T  49426133 taacacgtgacaccttacttagggtgtcacgtcagcgtagaccaagtcaaaattggcatt-ggggccaaaactgccacaaatgcaaaacttaaggaacag 49426231  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagggg 1429  Q
    ||||||||       ||||||| || ||||||||||||||| ||||||||||||    
T  49426232 ttttgtag-ttttttcttagagggctaaaatcgcaactttggaaaagttagggg 49426284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 50226531 - 50226638
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| || | ||||| |||  | || |||| ||||||||  |||| |||||||||||||||||||    
T  50226531 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaatattagccttcggggccaaaactgctacaggtgcaaaacttagagggcgg 50226630  T
Q  1376 ttttgtag 1383  Q
    ||| ||||    
T  50226631 tttagtag 50226638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1280 - 1383
Target Start/End: Complemental strand, 50401540 - 50401438
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| ||||||| ||| ||||||||||||| ||| || | |||||||||| | ||||||  ||||||||||||| ||||||||||||| ||||||||||    
T  50401540 acgtggcacctcatttaaggtgtcacgtcagagtagaccgagtcaaaattggccttggggc-caaaactgtcacaaatgcaaaacttagggggcggtttt 50401442  T
Q  1380 gtag 1383  Q
    ||||    
T  50401441 gtag 50401438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1286 - 1368
Target Start/End: Original strand, 41997791 - 41997873
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||||||||||||||||||||||| || | |||||||||| | |||| || |||||||| |||||||||||| |||||    
T  41997791 cacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggccttggaggccaaaactgccacagatgcaaagcttag 41997873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1288 - 1445
Target Start/End: Complemental strand, 17692887 - 17692730
Alignment:
Q  1288 cctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnn 1387  Q
    ||||||||||||||||||||||||||| |||| ||||||| || | |||||| | ||||| | |||| ||||||||||||  ||||| |||||||         
T  17692887 cctcacttagggtgtcacgtcagcgtagactgagtcaaaa-tggccttggggatgaaaaccgccacaaatgcaaaacttaaggggcgattttgtattttt 17692789  T
Q  1388 nnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
       ||||| | || |||||| ||||||||| ||||||| |||||||||| |||||||||    
T  17692788 tttcttagggggctaaaatcacaactttgagaaagttagggggttaaaattgctattaa 17692730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1286 - 1383
Target Start/End: Complemental strand, 18632479 - 18632382
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||| ||||||||| ||||||||||| |  | |||||||||||   |||||| ||||||||||||| ||||||||||||||||||  ||||||||    
T  18632479 cacctcatttagggtgttacgtcagcgtagatcgagtcaaaattgatcctgggggccaaaactgtcacaaatgcaaaacttagagggcaattttgtag 18632382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 23891727 - 23891788
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  23891727 tacaaaaccgccccttaagttttgcaactgtagcagttttggccccccaagatcaatttttg 23891788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 32295093 - 32295267
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| |||||||| |||||| | ||| || | || ||||||| | ||||||| ||||||||||||| ||| |||||||||  || ||    
T  32295093 taacacgtggcacctcatttagggtgccacgtccgggtagaccgagttaaaattggctttgggggccaaaactgtcacaaatgtaaaacttaggtggtgg 32295192  T
Q  1376 ttttgt-agnnnnnnncttagagtgccaaaatcgcaactttgaaaaag-ttaggggttaaaactgctattaagcc 1448  Q
    |||||| |        ||||| | | |||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  32295193 ttttgtaattttttttcttagggggtcaaaatcgcaactttgaaaaagtttaggggctaaaactcctattaagcc 32295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1289 - 1445
Target Start/End: Original strand, 12960998 - 12961155
Alignment:
Q  1289 ctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnn 1388  Q
    |||||||||||||||||||||||||| || | |||||||||| | || || | |||||||| ||||| ||||||| |||| || |  ||||||||         
T  12960998 ctcacttagggtgtcacgtcagcgtagaccgagtcaaaattggcctttggagccaaaactgccacagttgcaaaatttaggggacaattttgtagttttt 12961097  T
Q  1389 nncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaa 1445  Q
      |||||    |||||||||||||||||||||| ||||| || |||||||||||||||    
T  12961098 ttcttaggaaaccaaaatcgcaactttgaaaaaattaggaggctaaaactgctattaa 12961155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1280 - 1383
Target Start/End: Original strand, 14190686 - 14190789
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| ||||| |||||| ||| ||| |||||||| || | |||||||||| |||||| || |||||||| |||||||||||||||| ||||||  ||||    
T  14190686 acgtggcaccttacttagagtgccacatcagcgtagaccgagtcaaaattggcattggaggccaaaactgccacagatgcaaaacttcgagggccttttt 14190785  T
Q  1380 gtag 1383  Q
    ||||    
T  14190786 gtag 14190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 25085533 - 25085640
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||| ||| || |||||||||||||  ||| ||| |||||||| ||||| | |||||||| | | ||||    
T  25085533 taacacgtggcacctcacttagggtgccacgtcagtgtagaccgggtcaaaattgatcttgagggccaaaactgccacaggtacaaaacttggggtgcgg 25085632  T
Q  1376 ttttgtag 1383  Q
     |||||||    
T  25085633 atttgtag 25085640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 44436930 - 44436824
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||||||||  |||| |||||| |  | |||||||||||| ||||||| |||||||||||||  |||||||||||| || | |    
T  44436930 taacacgtggcacctcacttagggtgcgacgtaagcgtagatcgagtcaaaattgaccttggggg-caaaactgtcacaagtgcaaaacttaggggacag 44436832  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  44436831 ttttgtag 44436824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Complemental strand, 45739182 - 45739123
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    |||||||  ||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  45739182 tacaaaactgccccataagttttgcaactgtagcagttttggccccccaaggccaatttt 45739123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 17760936 - 17760875
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||| |||||    
T  17760936 tacaaaaccgccccttaagttttgcaattgtagcagttttggccccccaaggtcaagttttg 17760875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1298 - 1382
Target Start/End: Complemental strand, 8009880 - 8009796
Alignment:
Q  1298 ggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||||||||||||||| |  | ||||||||||   |||| |||||||||||||||||||||||||||| | | |||||||||||    
T  8009880 ggtgtcacgtcagcgtagaacgagtcaaaattggtcttggtggtcaaaactgtcacagatgcaaaacttcgggagcggttttgta 8009796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 14978970 - 14978797
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| ||| |||||||| ||    ||||||||| | || |||| |||||||  ||||| |||||||||||| |||| |    
T  14978970 taacatgtggcacctcacttagggtgccacatcagcgtagaccaattcaaaattggcctttggggccaaaactaccacaggtgcaaaacttagggggcag 14978871  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||        | |  |  ||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  14978870 ttttgtagtttttttttgaaggacccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 46572998 - 46572893
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||||||| |||| |||||||| ||   |||||||||| | ||||||  | |||||| |||| ||||||||||||| || |||    
T  46572998 taacacgtggcacctcacttagggtctcacatcagcgtagaccaagtcaaaattggccttgggg--ccaaactgccacaaatgcaaaacttaggggacgg 46572901  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  46572900 ttttgtag 46572893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Complemental strand, 7579837 - 7579731
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||| ||| |||||||||||||||| || ||||||||| || | |||||||||  | |||||||  |||| || ||||  |||||||||||| |||||||    
T  7579837 aacatgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattagctttgggggcaaaaattgccacaagtgcaaaacttagcgggcggt 7579738  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  7579737 tttgtag 7579731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Complemental strand, 23220739 - 23220633
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||| ||| |||||||||||||||| |||||||||||| || |  |||||||||   ||||||| |||||| | ||||  |||||||||||  |||||||    
T  23220739 aacatgtggcacctcacttagggtgccacgtcagcgtagaccgaatcaaaattggtcttgggggccaaaaccgccacatgtgcaaaacttaaggggcggt 23220640  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  23220639 tttgtag 23220633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1399 - 1447
Target Start/End: Original strand, 5287838 - 5287887
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagc 1447  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  5287838 gccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1286 - 1367
Target Start/End: Complemental strand, 16545724 - 16545643
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||||||||||||||  |||||||| || || | |||||||||  |||||||||  |||||||||| ||||||||||||||    
T  16545724 cacctcacttagggtgctacgtcagcatagaccgagtcaaaattaccattgggggcaaaaactgtcatagatgcaaaactta 16545643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 39642268 - 39642329
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||| ||||| |||||||||||||||| ||||||| |||||||||    
T  39642268 tacaaaaccgccccctaagttctgcaattgtagcagttttggccccccaaggccaatttttg 39642329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Complemental strand, 16874749 - 16874691
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| |||||||||||||||||| |||| |||||||||| ||||||||| |||||||    
T  16874749 tacaaaaccgccccataagttttgcatctgtggcagttttgg-ctcccaaggccaatttt 16874691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1276 - 1379
Target Start/End: Original strand, 20224671 - 20224773
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||||||  |||||| |||||||| |||||||||||| || | |||||||||| ||||| ||| |||||||| |||| || |||||| ||| ||| ||    
T  20224671 taacacgtggtacctcatttagggtgccacgtcagcgtagacagagtcaaaattgtcattgagggccaaaactgccaca-atacaaaacatagggggggg 20224769  T
Q  1376 tttt 1379  Q
    ||||    
T  20224770 tttt 20224773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Original strand, 41997707 - 41997750
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| |||| |||||||||||||||||||||||||||||||    
T  41997707 tacaaaaccgcctcataagttttgcaactgtagcagttttggcc 41997750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1276 - 1366
Target Start/End: Original strand, 5287367 - 5287457
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactt 1366  Q
    |||||| || |||||||||||||||| |||||||||||  || | |||||||||||| || |||| ||||||   |||| |||||||||||    
T  5287367 taacacttggcacctcacttagggtgccacgtcagcgtggaccgagtcaaaattgaccttcggggccaaaacatccacatatgcaaaactt 5287457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1336 - 1382
Target Start/End: Complemental strand, 7060742 - 7060696
Alignment:
Q  1336 gggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  7060742 gggggtcaaaattgttacagttgcaaaacttagagggcggttttgta 7060696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Complemental strand, 12960896 - 12960846
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||||||    
T  12960896 gccaaaatcgcaactttgaaaaagttagcgggctaaaactgttattaagcc 12960846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1277 - 1367
Target Start/End: Original strand, 46505311 - 46505401
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    |||| ||| |||||||||||||||||||||||| ||||||| | | ||||||||   ||||||| || ||||| | || ||||||||||||    
T  46505311 aacatgtggcacctcacttagggtgtcacgtcaacgtaaaccgagccaaaattggtcttgggggccagaactgccgcaaatgcaaaactta 46505401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1203 - 1257
Target Start/End: Complemental strand, 46573064 - 46573010
Alignment:
Q  1203 gccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgat 1257  Q
    ||||| ||||||||||||||||||||||||||| | ||| || ||||||||||||    
T  46573064 gccccctaagttttgcaactgtagcagttttggtcccccgagatcaatttttgat 46573010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Complemental strand, 51250535 - 51250485
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||||||||    
T  51250535 gccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcc 51250485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 3377758 - 3377697
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||| |||||||||||||| ||||||||||||||  |||||| |||||||||    
T  3377758 tacaaaaccgtcccctaagttttgcaactttagcagttttggccctccaaggccaatttttg 3377697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1278 - 1382
Target Start/End: Complemental strand, 6320733 - 6320631
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtt 1377  Q
    ||||||| ||||||||||||  ||||||||||||||| || | ||| ||||||   |  ||||||||||||  ||||||||||||| |||| || |||||    
T  6320733 acacgtggcacctcacttag--tgtcacgtcagcgtagaccgagtcgaaattggtctaaggggtcaaaactaccacagatgcaaaatttaggggacggtt 6320636  T
Q  1378 ttgta 1382  Q
    |||||    
T  6320635 ttgta 6320631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 12960913 - 12960974
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||| | |||||||||||||| |||||||||||||| |||||||  ||||||||    
T  12960913 tacaaaaccgcctcctaagttttgcaactatagcagttttggccccccaaggctaatttttg 12960974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1287 - 1383
Target Start/End: Original strand, 6569658 - 6569754
Alignment:
Q  1287 acctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||||| ||| |||||||||||| || |  |||||||||   ||| ||| |||||||| |||| ||| ||||||||  ||||||||||||||    
T  6569658 acctcacttagagtgccacgtcagcgtagaccgaatcaaaattggtcttgagggccaaaactgccacaaatgtaaaacttaaggggcggttttgtag 6569754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1202 - 1255
Target Start/End: Complemental strand, 48319644 - 48319589
Alignment:
Q  1202 cgccccataagttttgcaactgtagcagttttggcct--cccaaggtcaatttttg 1255  Q
    |||||| ||||||||||||||||||||||||||||||  | ||||| |||||||||    
T  48319644 cgccccctaagttttgcaactgtagcagttttggccttactcaaggccaatttttg 48319589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 14879 - 14914
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  14879 acacgtgacacctcacttagggtgtcacgtcagcgt 14914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Complemental strand, 23220808 - 23220757
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||| |||||| |||||||| |||||||||||||||||| | |||||||    
T  23220808 tacaaaaccgccccctaagttttacaactgtagcagttttggtcccccaagg 23220757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 32558353 - 32558388
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32558353 acacgtggcacctcacttagggtgtcacgtcagcgt 32558388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 33811597 - 33811562
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33811597 acacgtggcacctcacttagggtgtcacgtcagcgt 33811562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 34988262 - 34988227
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  34988262 acacgtggcacctcacttagggtgtcacgtcagcgt 34988227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 1096695 - 1096633
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctccc-aaggtcaatttttg 1255  Q
    ||||||| || ||| |||| |||||||||||||||||||||||| ||| |||| |||||||||    
T  1096695 tacaaaaccgtcccctaagctttgcaactgtagcagttttggccccccgaaggccaatttttg 1096633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1400 - 1445
Target Start/End: Original strand, 15659259 - 15659305
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctattaa 1445  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||    
T  15659259 ccaaaatcacaactttggaaaagttaggggcttaaaactgctattaa 15659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 25486443 - 25486397
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||| ||||| |||||||||||||| ||||| |||||||||||    
T  25486443 taagttttacaactatagcagttttggccccccaaagtcaatttttg 25486397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 27864255 - 27864300
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||    
T  27864255 taagttttgcaactgtagcagtttt-gaatcccaaggtcaatttttg 27864300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1399 - 1429
Target Start/End: Complemental strand, 50226442 - 50226412
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagttagggg 1429  Q
    |||||||||||||||||||||||||||||||    
T  50226442 gccaaaatcgcaactttgaaaaagttagggg 50226412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 50401603 - 50401558
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||    
T  50401603 taagttttgcaactgtagcag-tttggctccccaaggtcaatttttg 50401558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1321 - 1382
Target Start/End: Complemental strand, 6606664 - 6606603
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    |||||||||||| ||||||| |||||||| || |||| ||| || |||||||| ||||||||    
T  6606664 gtcaaaattgaccttgggggccaaaactgccaaagattcaatacatagagggctgttttgta 6606603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1202 - 1255
Target Start/End: Original strand, 15659056 - 15659108
Alignment:
Q  1202 cgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||| ||||||||||||||| ||||||||||||| ||||| | |||||||||    
T  15659056 cgccccctaagttttgcaactggagcagttttggcc-cccaaagccaatttttg 15659108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1277 - 1314
Target Start/End: Original strand, 18216820 - 18216857
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgta 1314  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  18216820 aacacgtggcacctcacttagggtgccacgtcagcgta 18216857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1298 - 1382
Target Start/End: Original strand, 19893066 - 19893150
Alignment:
Q  1298 ggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtc-aaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||||||||||||||| |||  ||||||| |||||||||||| | |||||||||| |||| ||| || ||| |||| ||||||||    
T  19893066 ggtgtcacgtcagcgtagactaagtcaaaagtgacattggggggcaaaaactgtcaaagatccaatacatag-gggctgttttgta 19893150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 1e-32; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Original strand, 51315625 - 51315798
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||||||| |||||||||||| || | |||||||||| | ||||||| |||||||| ||||| |||||||||||| |||||||    
T  51315625 aacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggt 51315724  T
Q  1377 tttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||        ||||| | ||||||||||||||||||  ||||||| |||| ||||||||||||||||||    
T  51315725 tttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcc 51315798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 1194 - 1383
Target Start/End: Original strand, 44436456 - 44436645
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcacctcac 1293  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| |||||| || |                  ||||||||| ||||||||    
T  44436456 tacaaaaccgccccctaagttttgcaactgtagcagttttggccccccaaggccaatttgtggtaaaaaataaaataaaaaataacacgtggcacctcac 44436555  T
Q  1294 ttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||| |||||||||||| || | |||||||||| | ||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  44436556 ttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 44436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Original strand, 54719138 - 54719309
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    ||||| || |||||||||||||||| |||||||||||| || | |||||||||| ||||||||| |||| |||  ||| ||||||||||||| |||||||    
T  54719138 aacacttggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggt 54719237  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||       |||||   |||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  54719238 tttgtag-ttttttcttaggaggccaaaatcgcaactttgaataagttagggggttaaaactgccattaagcc 54719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 3916603 - 3916431
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| ||||| || ||| || | |||||||||||| ||||||| |||||||| |||||||||||||||||| | |||     
T  3916603 taacacgtggcacctcacttagggtgccacgttagtgtagaccgagtcaaaattgactttgggggccaaaactgccacagatgcaaaacttagtgagcga 3916504  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||||        ||||| | ||||||||| ||||||  ||||| ||||||||||||||||||||||||||    
T  3916503 ttttgtagttttttttcttag-gggccaaaatcacaacttaaaaaaatttaggggttaaaactgctattaagcc 3916431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Original strand, 44585926 - 44586097
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||| || |||||||||||||||| |||||||||||| || | |||||||||| |  |||||| |||||||| |||||| ||||||||||| ||||||    
T  44585926 taacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcgg 44586025  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    ||||||||        ||||| | ||||||||||||||||||  ||||||| |||| |||||||||||||||    
T  44586026 ttttgtagttttttttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1276 - 1374
Target Start/End: Complemental strand, 25843539 - 25843441
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcg 1374  Q
    ||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||| | ||||||  |||||||| |||||||||||||||||| |||||    
T  25843539 taacacgtggcacctcgcttagggtgccacgtcagcgtagactgggtcaaaattggccttggggaccaaaactgccacagatgcaaaacttagggggcg 25843441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Original strand, 36687731 - 36687823
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||| || ||||| || |||| ||||||| |||||    
T  36687731 taacacgtggcacctcacttagggtgccacgtcagcgtaaaccgagtcaaaattgacattggaggccaaaattgccacaaatgcaaatcttag 36687823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1197 - 1383
Target Start/End: Original strand, 44433126 - 44433311
Alignment:
Q  1197 aaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcacctcactta 1296  Q
    |||| |||||| || ||||||||||| |||||||||||||||||||||| ||||||||| |                  ||||||||| ||||| |||||    
T  44433126 aaaaccgccccctaggttttgcaactatagcagttttggcctcccaaggccaatttttggtaatttttttttttaaaaataacacgtgacacctaactta 44433225  T
Q  1297 gggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    || || ||| |||||||| || |||||||||||| | ||||||| |||||||| |||| ||||||||||||| ||||||||||||||    
T  44433226 gg-tgccacatcagcgtagaccgggtcaaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtag 44433311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1276 - 1447
Target Start/End: Original strand, 1814697 - 1814866
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattga-cattgggggtcaaaactgtcacagatgcaaaacttagagggcg 1374  Q
    ||||||||| |||||||||||||||| |||||||||||| || | ||||||||||| | | ||||| |||||||| |    ||||||||||||| || ||    
T  1814697 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgatcttagggggccaaaactgcc----atgcaaaacttaggggacg 1814792  T
Q  1375 gttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagc 1447  Q
    |||||||||       ||||| |  ||||||||| ||||||| |||||||||| || |||||||||||||||||    
T  1814793 gttttgtagtttttttcttaggggtccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 1938490 - 1938383
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| || ||||||||| || | |||||||||||| ||| ||| |||||||  ||||| |||||||||||  ||||||    
T  1938490 taacacgtgacacctcacttagggtgccatgtcagcgtagaccgagtcaaaattgactttgtgggccaaaactaccacaggtgcaaaacttaaggggcgg 1938391  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  1938390 ttttgtag 1938383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Original strand, 19404534 - 19404625
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||||||| |||||||||||||||||||||| |||||| |||  |||||||||| | ||||||| |||||||||||||  |||||||||||    
T  19404534 taacacgtggcacctcacttagggtgtcacgttagcgtagactaagtcaaaattggccttgggggccaaaactgtcacatgtgcaaaactta 19404625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 33329757 - 33329864
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| || | ||||||||||   ||||||| |||||||| |||| |||||| |||||| || |||    
T  33329757 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaatacttaggggacgg 33329856  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  33329857 ttttgtag 33329864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Complemental strand, 38177349 - 38177178
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||| ||| |||||||||||||||| |||||||||| |||| | |||||||||| | ||||||| ||||| ||||||| |||||||||||| | || |||    
T  38177349 aacatgtggcacctcacttagggtgccacgtcagcgcaaaccgagtcaaaattggccttgggggccaaaaatgtcacatatgcaaaacttaaaaggtggt 38177250  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagcc 1448  Q
    ||||||        ||||| | ||||||||||||||||||  |||||| ||||| ||||| ||| ||||||||    
T  38177249 tttgta-attttttcttagggggccaaaatcgcaactttgggaaagttaaggggctaaaattgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 43747420 - 43747527
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||||| || |||||||||||| || | |||||||||||   |||||| |||||||| || | ||||||||||||| ||||||    
T  43747420 taacacgtggcacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcgtgggggccaaaactgccataaatgcaaaacttagggggcgg 43747519  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  43747520 ttttgtag 43747527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Original strand, 27178288 - 27178394
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||| ||| |||||||| ||||||| ||| |||||||| ||   |||||||||| |||||||||||||||||  |||||||||||||||||| ||| |||    
T  27178288 aacatgtgacacctcacgtagggtgacacatcagcgtagaccaagtcaaaattggcattgggggtcaaaactaccacagatgcaaaacttagggggtggt 27178387  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  27178388 tttgtag 27178394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1194 - 1368
Target Start/End: Original strand, 14856614 - 14856788
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcacctcac 1293  Q
    ||||||||||||||||||||||||||||| ||| |||||||||| ||||| | ||||||||| |                  ||||||||| ||| ||||    
T  14856614 tacaaaatcgccccataagttttgcaactatagtagttttggccccccaatgccaatttttggtaaaaaaataatataaaaataacacgtggcacatcac 14856713  T
Q  1294 ttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||| ||||||||||||||||| || |  ||||||||||||||||||| |||||||| ||||  ||||||| ||||    
T  14856714 ttaaggtgtcacgtcagcgtagaccgaatcaaaattgacattgggggccaaaactggcacatgtgcaaaatttag 14856788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 20432324 - 20432497
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatg-caaaacttagagggcg 1374  Q
    ||||||||| ||||||||||||||||  ||||||||||| ||   |||||||||| | |||||||||||||||| ||||||||  ||||||||| ||| |    
T  20432324 taacacgtggcacctcacttagggtgctacgtcagcgtagaccaagtcaaaattgtccttgggggtcaaaactgccacagatgtaaaaacttagggggtg 20432423  T
Q  1375 gttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
     ||||||||       ||||| |  |||||||| |||||||  |||||||| |||||||||| ||||||||||||    
T  20432424 attttgtag-ttttttcttaggggaccaaaatcacaacttttgaaaagttagggggttaaaaatgctattaagcc 20432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 47189734 - 47189841
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||| ||||||||||||| ||| ||   |||||||||||  ||| |||||||||||| |||| ||||||||||||  | ||||    
T  47189734 taacacgtgacacctcacttaaggtgtcacgtcagtgtagacgaagtcaaaattgatcttgagggtcaaaactgccacaaatgcaaaacttatggagcgg 47189833  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  47189834 ttttgtag 47189841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1288 - 1383
Target Start/End: Complemental strand, 54464324 - 54464229
Alignment:
Q  1288 cctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||| |||| ||||| |||||| || | |||||||||||| |||||||||||||||| |||| ||||||||||||| || | |||||||||    
T  54464324 cctcacttaaggtgccacgtgagcgtagaccgagtcaaaattgaccttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtag 54464229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1321 - 1448
Target Start/End: Complemental strand, 38957975 - 38957845
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaa 1418  Q
    |||||||||| | ||||||| |||||||| |||| ||||||||||||| ||||||||||||||         |||| || ||||||||||||||||| ||    
T  38957975 gtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttttttcttaaagggccaaaatcgcaactttaaa 38957876  T
Q  1419 aaagttagg-ggttaaaactgctattaagcc 1448  Q
    ||| ||||| || ||||||||||||||||||    
T  38957875 aaaattaggaggctaaaactgctattaagcc 38957845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Complemental strand, 46226871 - 46226765
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| || | || ||||||| ||| ||||| |||||||| ||||| |||||||| ||| ||| ||    
T  46226871 taacacgtggcacctcacttagggtgccacgtcagcgtataccgagttaaaattggcatcgggggccaaaactgccacaggtgcaaaacatagggggtgg 46226772  T
Q  1376 ttttgta 1382  Q
    | |||||    
T  46226771 tattgta 46226765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1277 - 1445
Target Start/End: Original strand, 48348400 - 48348569
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||| ||| |||||||||||| || | ||||||||||   || ||||||||||||| |||| ||||||||||||  ||||| |    
T  48348400 aacacgtggcacctcacttagcgtgccacgtcagcgtagaccgagtcaaaattgggctt-ggggtcaaaactgccacatatgcaaaacttaaggggcgat 48348498  T
Q  1377 tttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    |||||||        |||| ||  |||||||||||||||| ||||||||| |||| ||||||| |||||||    
T  48348499 tttgtagttatttttcttaaaggaccaaaatcgcaactttaaaaaagttagggggataaaactactattaa 48348569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Original strand, 7218291 - 7218383
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||| ||||||||||| |||||||||||||| || |    |||||||||||| ||||||| |||||||| |||||||| |||||||||    
T  7218291 taacacgtggcacctcacttaaggtgtcacgtcagcatagatcaagtcaaaattgaccttgggggccaaaactgccacagatgtaaaacttag 7218383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Original strand, 36677651 - 36677743
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||| ||||||||||| |||| ||||||||||||||| | |||||||||||| |||| || ||||| || |||| ||||||| |||||    
T  36677651 taacacgtggcacctcacttaaggtgccacgtcagcgtaaaccgagtcaaaattgaccttggaggccaaaattgccacaaatgcaaatcttag 36677743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 28712628 - 28712521
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||| ||| || | |||||| ||| | ||||| |  |||||||  ||||||||||||||||| |||||     
T  28712628 taacacgtggcacctcacttagggtgccacgtcagtgtagaccgagtcaaagttggccttgggtgctaaaactgctacagatgcaaaacttagggggcga 28712529  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  28712528 ttttgtag 28712521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 54719073 - 54719119
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  54719073 taagttttgcaactgtagcagttttggccccccaaggtcaatttttg 54719119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 14340801 - 14340862
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||| | |||||||||    
T  14340801 tacaaaaccgccccacaagttttgcaattgtagcagttttggcctcccaaagccaatttttg 14340862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1251
Target Start/End: Complemental strand, 25154427 - 25154370
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatt 1251  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  25154427 tacaaaaccgccccttaagttttgcaactgtagcagttttggccccccaaggccaatt 25154370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 43747346 - 43747407
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| ||||||  |||||||||    
T  43747346 tacaaaatcgcccaataagttttgcaattgtagcagttttggccccccaagaccaatttttg 43747407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1276 - 1364
Target Start/End: Complemental strand, 44624797 - 44624710
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaac 1364  Q
    |||||| ||||||||||||||||||| |||||||||||| || | |||||||||| | || |||  |||||||| ||||||||||||||    
T  44624797 taacacatgtcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcctt-gggaccaaaactgccacagatgcaaaac 44624710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1335 - 1447
Target Start/End: Complemental strand, 50802773 - 50802660
Alignment:
Q  1335 tgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaa 1433  Q
    ||||||||||||||| ||||  |||||||||||| |||  |||||||||       ||||| | ||||||||| |||||||| ||||||| || ||||||    
T  50802773 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaa 50802674  T
Q  1434 aactgctattaagc 1447  Q
    ||||||||||||||    
T  50802673 aactgctattaagc 50802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1335 - 1447
Target Start/End: Original strand, 50873104 - 50873217
Alignment:
Q  1335 tgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaa 1433  Q
    ||||||||||||||| ||||  |||||||||||| |||  |||||||||       ||||| | ||||||||| |||||||| ||||||| || ||||||    
T  50873104 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaa 50873203  T
Q  1434 aactgctattaagc 1447  Q
    ||||||||||||||    
T  50873204 aactgctattaagc 50873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1276 - 1373
Target Start/End: Complemental strand, 52008418 - 52008319
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtc--aaaactgtcacagatgcaaaacttagagggc 1373  Q
    ||||||||| ||||||||||||||||||||||||||||| || | ||||||||| |  || |||| |  ||||||| |||| |||||||| |||||||||    
T  52008418 taacacgtgacacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattaattttaggggccaaaaaactgccacatatgcaaaaattagagggc 52008319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1196 - 1255
Target Start/End: Complemental strand, 3193026 - 3192967
Alignment:
Q  1196 caaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||| || ||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3193026 caaaaccgacccctaagttttgcaactgtaacagttttggccccccaaggtcaatttttg 3192967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1277 - 1379
Target Start/End: Complemental strand, 35359169 - 35359067
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    ||||||||  || ||||||| |||| |||||||||||| || | ||||||||||||||| |||| |||||||| ||||  ||||||| |||| ||||| |    
T  35359169 aacacgtgggacatcacttaaggtgccacgtcagcgtagaccgagtcaaaattgacattaggggccaaaactgccacatgtgcaaaaattagggggcgat 35359070  T
Q  1377 ttt 1379  Q
    |||    
T  35359069 ttt 35359067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1293 - 1378
Target Start/End: Original strand, 791477 - 791562
Alignment:
Q  1293 cttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttt 1378  Q
    ||||||||| |||||||||||| |    ||| |||||||||||| ||| ||||| ||||||||||||||||||||  |||||||||    
T  791477 cttagggtgccacgtcagcgtagatcaagtcgaaattgacattgagggccaaaagtgtcacagatgcaaaacttatggggcggttt 791562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 12759576 - 12759635
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  12759576 tacaaaaccgcccc-taagttttgcaactgtagcagttttggcct-ccaaagtcaatttttg 12759635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 28204545 - 28204606
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||| ||| |||| |||||||||||||||||| | ||||||| |||||||||    
T  28204545 tacaaaatcgccccctaaattttacaactgtagcagttttggtcccccaaggccaatttttg 28204606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 3192947 - 3192774
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattg-ggggtcaaaactgtcacagatgcaaaacttagagggcg 1374  Q
    ||||| ||| |||||||||||||||| || || || ||| || | |||||||||||| ||| |||| | |||||   |||| || ||||||||| || ||    
T  3192947 taacatgtggcacctcacttagggtgccatgttagtgtagaccgagtcaaaattgaccttgaggggcctaaactactacagttgaaaaacttaggggtcg 3192848  T
Q  1375 gttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    |||||||||       ||||| |    |||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  3192847 gttttgtagttttttccttaggggatgaaaagcgcaactttgaaaaagttaggggctaaaacttctattaagcc 3192774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1194 - 1254
Target Start/End: Complemental strand, 4474316 - 4474256
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaattttt 1254  Q
    ||||||| |||||  ||||||||||||||||||||||||||||| ||||||  ||||||||    
T  4474316 tacaaaaccgccctctaagttttgcaactgtagcagttttggccccccaagaccaattttt 4474256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1194 - 1254
Target Start/End: Original strand, 8024842 - 8024902
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaattttt 1254  Q
    ||||||| |||||| || |||||||||||||||||||||||||| ||||| | ||||||||    
T  8024842 tacaaaaccgccccctacgttttgcaactgtagcagttttggccccccaaagccaattttt 8024902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1194 - 1234
Target Start/End: Complemental strand, 28712708 - 28712668
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttg 1234  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  28712708 tacaaaatcgccccctaagttttgcaactgtagcagttttg 28712668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1194 - 1242
Target Start/End: Original strand, 51315562 - 51315610
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctccca 1242  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||    
T  51315562 tacaaaaccgccccctaagttttgcaactgtagcagttttggcccccca 51315610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 14340874 - 14341046
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||| || |||||||||||   || || || |||||| || | |||||||||  | ||||||| |||||||| |||| ||||||||||||| || |      
T  14340874 taacacatgacacctcacttaacctgccatgttagcgtagaccgagtcaaaattagcgttgggggccaaaactgccacaaatgcaaaacttaggggacta 14340973  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||||        |||||  | ||||||||||||||||||||||||||  | ||||||| ||||||||||    
T  14340974 ttttgtagttttttttttagatggtcaaaatcgcaactttgaaaaagttagaaggtaaaactactattaagcc 14341046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1303 - 1366
Target Start/End: Complemental strand, 49787397 - 49787334
Alignment:
Q  1303 cacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactt 1366  Q
    |||||||||||| || | |||||||||||| |||| || |||||||| ||||||||||||||||    
T  49787397 cacgtcagcgtagaccgagtcaaaattgactttggaggccaaaactgccacagatgcaaaactt 49787334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1286 - 1348
Target Start/End: Original strand, 14992781 - 14992843
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaact 1348  Q
    ||||||||||| |||| || ||||||||| |||| |||||||||||| ||||||| |||||||    
T  14992781 cacctcacttaaggtgccatgtcagcgtagactgagtcaaaattgaccttgggggacaaaact 14992843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1337 - 1448
Target Start/End: Original strand, 44127547 - 44127661
Alignment:
Q  1337 ggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnnct--tagagtgccaaaatcgcaactttgaaaaagttag-gggttaa 1433  Q
    |||||||||||||| |||| |||||| ||||| ||||| ||||||||        |  ||||| ||||||||||||||||||| ||| |||| | |||||    
T  44127547 ggggtcaaaactgttacagttgcaaagcttagggggcgattttgtagtttttttttcgtagagggccaaaatcgcaactttgagaaaattagagagttaa 44127646  T
Q  1434 aactgctattaagcc 1448  Q
    |||||||||||||||    
T  44127647 aactgctattaagcc 44127661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 44624861 - 44624816
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  44624861 taagttttgcaactgtagcagtttcggcct-ccaaggtcaatttttg 44624816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1286 - 1371
Target Start/End: Complemental strand, 4474231 - 4474147
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagg 1371  Q
    ||||||||||||| ||||| ||||||||| || |  |||||||||   || ||||||||||||| |||| ||||||||||||||||    
T  4474231 cacctcacttagg-tgtcatgtcagcgtagaccgaatcaaaattggtcttaggggtcaaaactgccacaaatgcaaaacttagagg 4474147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1336 - 1448
Target Start/End: Original strand, 25902553 - 25902667
Alignment:
Q  1336 gggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnn-cttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaa 1433  Q
    ||||| |||||||| |||| ||||||||||||   |||||||||||||        ||||| | ||||||||||||||||||| ||||||| |||| |||    
T  25902553 gggggccaaaactgccacaaatgcaaaacttatgaggcggttttgtagttttttttcttagggagccaaaatcgcaactttgagaaagttagggggctaa 25902652  T
Q  1434 aactgctattaagcc 1448  Q
    ||||| |||||||||    
T  25902653 aactgatattaagcc 25902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 38958091 - 38958030
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||||||||||||||||||||| || |  |||| |||||||||    
T  38958091 tacaaaaccgccccctaagttttgcaactgtagcagttttgaccccataaggccaatttttg 38958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 44585855 - 44585916
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||| ||||||||||||||||||||| ||| ||||||  |||||||||    
T  44585855 tacaaaaccgccccctaaattttgcaactgtagcagttttcgccccccaagaccaatttttg 44585916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1278 - 1382
Target Start/End: Original strand, 36567016 - 36567120
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtt 1377  Q
    ||||||| |||||||||||||||| |||||||||||  || | |||||||| | | ||||||| |||||||   |||| |||||||| ||| || | |||    
T  36567016 acacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaatcggccttgggggccaaaactagtacagttgcaaaacataggggtctgtt 36567115  T
Q  1378 ttgta 1382  Q
    |||||    
T  36567116 ttgta 36567120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1290 - 1447
Target Start/End: Original strand, 43586715 - 43586872
Alignment:
Q  1290 tcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnn 1389  Q
    |||||||||||| |||||||||||| ||   ||||||||||  ||  |||| || |||||||||| ||||||||| |||  | || ||||||||          
T  43586715 tcacttagggtgccacgtcagcgtagaccaagtcaaaattggtatcaggggccataactgtcacaaatgcaaaacataggagacgattttgtagtttttt 43586814  T
Q  1390 ncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagc 1447  Q
     |||||   |||||||||||||||||||||||||| || || ||||||| |||||||||    
T  43586815 -cttaggaggccaaaatcgcaactttgaaaaagttgggaggctaaaactactattaagc 43586872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1197 - 1237
Target Start/End: Original strand, 47189667 - 47189707
Alignment:
Q  1197 aaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  47189667 aaaaccgccccttaagttttgcaactgtagcagttttggcc 47189707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Complemental strand, 86809 - 86758
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||| |||| | ||||||||||||||||||||||||||| | |||||||    
T  86809 tacaaaaccgcctcctaagttttgcaactgtagcagttttggtcccccaagg 86758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1196 - 1255
Target Start/End: Original strand, 14992691 - 14992750
Alignment:
Q  1196 caaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||| ||| || ||||||||||||||||||||||||||||| |  |||| |||||||||    
T  14992691 caaaaccgcaccttaagttttgcaactgtagcagttttggccccttaaggccaatttttg 14992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 15978938 - 15978895
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||    
T  15978938 tacaaaaccgccccctaagttttgcaactatagcagttttggcc 15978895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Original strand, 17773238 - 17773288
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||| |||||| |||||||||||||||| |||||||||||| |||||||    
T  17773238 tacaaaaccgcccc-taagttttgcaactgtggcagttttggccccccaagg 17773288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Original strand, 19074539 - 19074589
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||| |||||| |||||||||||||||| |||||||||||| |||||||    
T  19074539 tacaaaaccgcccc-taagttttgcaactgtggcagttttggccccccaagg 19074589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1402 - 1448
Target Start/End: Complemental strand, 25248739 - 25248692
Alignment:
Q  1402 aaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||    
T  25248739 aaaatcgcaactttaaaaaagttaaagggttaaaactgctattaagcc 25248692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1351 - 1382
Target Start/End: Complemental strand, 25248789 - 25248758
Alignment:
Q  1351 cacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||||||||||||||||||||||||||||||    
T  25248789 cacagatgcaaaacttagagggcggttttgta 25248758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1233
Target Start/End: Original strand, 28712522 - 28712561
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagtttt 1233  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  28712522 tacaaaatcgccccctaagttttgcatctgtagcagtttt 28712561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1337 - 1448
Target Start/End: Original strand, 28712663 - 28712775
Alignment:
Q  1337 ggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaa 1435  Q
    |||||||||||||  |||| |||||||||||| ||||| ||||||||       ||||| | ||||||||| ||||||   |||||||| ||||  ||||    
T  28712663 ggggtcaaaactgctacagttgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaa 28712762  T
Q  1436 ctgctattaagcc 1448  Q
    |||||||||||||    
T  28712763 ctgctattaagcc 28712775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 37182140 - 37182175
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37182140 acacgtggcacctcacttagggtgtcacgtcagcgt 37182175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Complemental strand, 44436644 - 44436586
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||| ||||||| |||||||    
T  44436644 tacaaaaccgccccctaagttttgcatctgtggcagttttggcc-cccaaggccaatttt 44436586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Complemental strand, 51315730 - 51315672
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| |||||| ||||||||||| |||| |||||||||||| ||||||| |||||||    
T  51315730 tacaaaaccgccccctaagttttgcacctgtggcagttttggcc-cccaaggccaatttt 51315672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1276 - 1363
Target Start/End: Complemental strand, 53184682 - 53184596
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaa 1363  Q
    ||||||||| ||| ||||||||||||||| ||||||||| || | ||||||||||   |||| || |||||||| |||| ||||||||    
T  53184682 taacacgtgacacatcacttagggtgtcaagtcagcgtagaccgagtcaaaattggttttggagg-caaaactgccacaaatgcaaaa 53184596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1336 - 1382
Target Start/End: Original strand, 4474270 - 4474316
Alignment:
Q  1336 gggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||| ||||||||  |||| ||||||||||||||||||||||||||    
T  4474270 gggggccaaaactgctacagttgcaaaacttagagggcggttttgta 4474316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 25248918 - 25248872
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||| || | || |||||||||    
T  25248918 taagttttgcaactgtagcagttttggccccctagggccaatttttg 25248872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1337 - 1383
Target Start/End: Original strand, 38958046 - 38958092
Alignment:
Q  1337 ggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||||  |||| |||||||||||| ||||||||||||||    
T  38958046 ggggtcaaaactgctacagttgcaaaacttagggggcggttttgtag 38958092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1278 - 1312
Target Start/End: Original strand, 42230172 - 42230206
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcg 1312  Q
    ||||||| |||||||||||||||||||||||||||    
T  42230172 acacgtggcacctcacttagggtgtcacgtcagcg 42230206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1278 - 1312
Target Start/End: Complemental strand, 45744071 - 45744037
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcg 1312  Q
    ||||||| |||||||||||||||||||||||||||    
T  45744071 acacgtggcacctcacttagggtgtcacgtcagcg 45744037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1402 - 1447
Target Start/End: Original strand, 53020587 - 53020633
Alignment:
Q  1402 aaaatcgcaactttgaaaaagttaggggt-taaaactgctattaagc 1447  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||    
T  53020587 aaaatcgcaattttgataaagttaggggtctaaaactgctattaagc 53020633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 1814616 - 1814676
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| | |||| |||||||||||||| |||||||||| ||| ||||||| |||||||||    
T  1814616 tacaaaaccaccccttaagttttgcaactatagcagtttttgcc-cccaaggccaatttttg 1814676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 7218220 - 7218280
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||| ||| | |||||||||||||| ||||||||||||||| |||||| || ||||||    
T  7218220 tacaaaattgcctcctaagttttgcaactatagcagttttggcct-ccaaggccattttttg 7218280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1400 - 1429
Target Start/End: Complemental strand, 29512596 - 29512567
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagttagggg 1429  Q
    ||||||||||||||||||||||||||||||    
T  29512596 ccaaaatcgcaactttgaaaaagttagggg 29512567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1278 - 1382
Target Start/End: Original strand, 32508060 - 32508164
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaa-aattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    ||||||| |||||||||||||||| |||||||||||  |||| ||||| ||| ||| | ||||  ||||||||||| |||  |||||| ||| |||| ||    
T  32508060 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaacaatggac-tcggggtccaaaactgtcaaagaatcaaaacatagggggctgt 32508158  T
Q  1377 tttgta 1382  Q
    ||||||    
T  32508159 tttgta 32508164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1334 - 1383
Target Start/End: Original strand, 35359182 - 35359231
Alignment:
Q  1334 ttgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||| |||||||| || || |||||||||||||||||| ||||||||    
T  35359182 ttgggggccaaaactgccatagttgcaaaacttagagggcgattttgtag 35359231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1276 - 1313
Target Start/End: Original strand, 38511796 - 38511833
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  38511796 taacacgtggcacctcacttagggtgccacgtcagcgt 38511833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1243
Target Start/End: Complemental strand, 46226936 - 46226887
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaa 1243  Q
    ||||||| || ||||||| ||||||||||||||||||||| ||| |||||    
T  46226936 tacaaaaccgtcccataacttttgcaactgtagcagttttagccccccaa 46226887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1297 - 1382
Target Start/End: Original strand, 54716667 - 54716752
Alignment:
Q  1297 gggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||| |||||||||| | |||  ||||||| |||| ||||||| ||||||||||| |||| ||| || |||||||  ||||||||    
T  54716667 gggtgccacgtcagcgaatactaagtcaaaagtgaccttgggggccaaaactgtcaaagatccaatacatagagggttgttttgta 54716752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 70; Significance: 8e-31; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1289 - 1382
Target Start/End: Original strand, 46228 - 46321
Alignment:
Q  1289 ctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||||||||||| |||||||||||| |||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  46228 ctcacttagggtgccacgtcagcgtagactgagtcaaaattgaccttgggggccaaaactgtcacagatgcaaaacttagagggcagttttgta 46321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Original strand, 46144 - 46187
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| |||||| |||||||||||||||||||||||||||||    
T  46144 tacaaaaccgccccctaagttttgcaactgtagcagttttggcc 46187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 8e-31; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Original strand, 36580415 - 36580585
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| |||||||| |||||||||||| || | |||||||||||| ||||||| |||||||| |||| ||||||||||||| ||||||    
T  36580415 taacacgtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattgactttgggggccaaaactgccacaaatgcaaaacttagggggcgg 36580514  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaa 1445  Q
    ||||||||       |||  ||   |||||||||||||||||||||||| | ||||||||||| |||||||    
T  36580515 ttttgtagcttttttcttgaaggatcaaaatcgcaactttgaaaaagttaaagggttaaaactactattaa 36580585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Complemental strand, 18504417 - 18504246
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||||||  ||||||||||||||| |||||||||||| |||| |||||||||| | || | || |||||||| |||| ||||||||||||| ||||||    
T  18504417 taacacgtggaacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcgg 18504318  T
Q  1376 ttttgtag-nnnnnnnctta-gagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaa 1445  Q
    ||||||||        |||| | | ||||||||| ||||||| |||||||||||||||||||||||||||||    
T  18504317 ttttgtagtattttttcttaggggggccaaaatcacaactttaaaaaagttaggggttaaaactgctattaa 18504246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 8e-28
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 35250292 - 35250119
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||| |||| |||||||| ||| || | |||||||||| | ||||||  ||||||||||| ||||||||||||||||||||||    
T  35250292 taacacgtggcacctcacttaaggtgccacgtcagtgtagaccgagtcaaaattggccttggggtccaaaactgtcaaagatgcaaaacttagagggcgg 35250193  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    |||| |||       ||||  |  ||||||||||||||||| ||||||||| ||| ||||||| ||||||||||    
T  35250192 ttttatagtttttttcttaagggaccaaaatcgcaactttggaaaagttagagggctaaaactactattaagcc 35250119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 28785895 - 28786071
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |||||||||  | |||||||||||||||| || | ||||||||||||  |||| |    
T  28785895 taacacgtggcacctcacttagggtgtcacgtcagcgtagaccgagtcaaaattagccttgggggtcaaaactgccataaatgcaaaacttatggggcag 28785994  T
Q  1376 ttttgtag----nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||           |||| || ||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  28785995 ttttgtagttttttttcttctta-agggccaaaatcacaactttggaaaagttatggggttaaaactgctattaagcc 28786071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1286 - 1448
Target Start/End: Original strand, 17931880 - 17932040
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnn 1385  Q
    |||||||||||||||| |||||||||||| ||   ||||||||||| ||| |||  |||||||| ||||||||||||| |||||||||| |||||||       
T  17931880 cacctcacttagggtgccacgtcagcgtagacaaagtcaaaattgatatttgggaccaaaactgacacagatgcaaaatttagagggcgattttgta--- 17931976  T
Q  1386 nnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
          |||||| |||||||||||||||||| |||||| ||| || ||||||||||||||||||    
T  17931977 ttttttttagagggccaaaatcgcaactttggaaaagtgaggaggctaaaactgctattaagcc 17932040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 5e-23
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 41243816 - 41243644
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||| || |||||||||||||||| ||||||| |||| || | |||||||||| | ||||||   ||||||| |||| ||||||||||||| ||||||    
T  41243816 taacacatgacacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttggggacaaaaactgccacaaatgcaaaacttag-gggcgg 41243718  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||       ||||| | || ||||| ||||||||| |||||||| |||| ||||||||||||||||||    
T  41243717 ttttgtagtttttttcttagggggctaaaattgcaactttggaaaagttagggggctaaaactgctattaagcc 41243644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Original strand, 29834291 - 29834397
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| ||||||||||||||||||||||||||||  || | ||| |||||||| |||||||  |||| |||||||| |||||||||||| ||||||    
T  29834291 taacatgtggcacctcacttagggtgtcacgtcagcgtggaccgagtctaaattgaccttgggggagaaaattgtcacaggtgcaaaacttagggggcgg 29834390  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  29834391 ttttgta 29834397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1276 - 1444
Target Start/End: Original strand, 21505758 - 21505927
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||||||||||| |||| |||| ||||||| || | ||||| | |||||||| || | ||||||| | ||| |||| |    
T  21505758 taacacgtgacacctcacttagggtgtcacgtcaacgtagactgagtcaaaa-tggccttgggagccaaaactgccatatatgcaaagcatagggggcag 21505856  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctatta 1444  Q
    ||||||||        ||||| | |||||||||||||||||||||||||||||||  ||||||||||||||    
T  21505857 ttttgtagttttttttcttagggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1279 - 1383
Target Start/End: Original strand, 6726398 - 6726501
Alignment:
Q  1279 cacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttt 1378  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||||||||| | ||||||| |||||||| ||||  |||||||||||| ||| | |||    
T  6726398 cacgtggcacctcacttagggtgccacgtcagcgtaaactgagtcaaaattgtccttggggg-caaaactgccacatgtgcaaaacttagggggtgattt 6726496  T
Q  1379 tgtag 1383  Q
    |||||    
T  6726497 tgtag 6726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 15107132 - 15107303
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| ||| |||| ||| || | |||||||||| |||||| || |||||||| |||| ||||||||||||| | ||||    
T  15107132 taacatgtggcacctcacttagggtgccacatcagtgtagaccgagtcaaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcgg 15107231  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||        |||| | |||||||||| ||||||| |||| ||| |||| ||||||||||||||||||    
T  15107232 ttttgtagtttttt--ttagggggccaaaatcgtaactttggaaaaattaggggggtaaaactgctattaagcc 15107303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Original strand, 18186591 - 18186763
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||| |||| |||||||||||||||| ||||||| |||| |||| |||||||||| | ||||||  |||||||| |||||||||||||||||  || |||    
T  18186591 taacccgtggcacctcacttagggtgccacgtcaacgtagactgagtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacgg 18186690  T
Q  1376 ttttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    |||| |||         ||||| | | |||||||| ||||||| |||||||| |||| |||||||||||||||    
T  18186691 ttttatagtttttttttcttagggggtcaaaatcgtaactttggaaaagttagggggctaaaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1277 - 1447
Target Start/End: Complemental strand, 28472560 - 28472391
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||| ||| ||||||| | |||||||||||||| |||| || |  |||||||||   |||||||  ||||||| |||| | |||||||||| |||||| |    
T  28472560 aacatgtggcacctcattcagggtgtcacgtcaacgtagaccgaatcaaaattggtcttgggggcgaaaactgccacataagcaaaacttatagggcgat 28472461  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagc 1447  Q
    |||||||       ||||| | | |||||||||||||||| |||||||||||| |||||||||||||||||    
T  28472460 tttgtagtttttt-cttagggggtcaaaatcgcaactttggaaaagttaggggctaaaactgctattaagc 28472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Complemental strand, 4049882 - 4049775
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaa-acttagagggcgg 1375  Q
    |||||||| |||||||||||||||| |||||||||||| |  | |||||||||| | ||| |||||||||||| |||||||||||| |||||| |  |||    
T  4049882 aacacgtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattggccttgagggtcaaaactgccacagatgcaaagacttagggaacgg 4049783  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  4049782 ttttgtag 4049775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 15029234 - 15029058
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||  ||||||| |||||||||||||| |  || | |||||||||||| ||||||| |||||||| ||||  |||||||||||| ||||||    
T  15029234 taacacgtggcatttcacttaaggtgtcacgtcagcatggac-gagtcaaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcgg 15029136  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg----ggttaaaactgctattaagcc 1448  Q
    ||||||||         |||| | | |||||||||||||||| ||||||||||    |||||||||||||||||||||    
T  15029135 ttttgtagttttttttattagggggtcaaaatcgcaactttggaaaagttaggggttggttaaaactgctattaagcc 15029058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 36903436 - 36903330
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| || ||||||||| || | |||||||||| | ||| ||| |||||||| |||||||| ||||||||| ||||||    
T  36903436 taacatgtggcacctcacttagggtgccatgtcagcgtagaccgagtcaaaattggccttgagggccaaaactgccacagatggaaaacttag-gggcgg 36903338  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  36903337 ttttgtag 36903330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1287 - 1383
Target Start/End: Complemental strand, 15348113 - 15348018
Alignment:
Q  1287 acctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||||||||| ||| |||||||| || | |||||||||||| ||||||| || ||||  |||||||||||||||||| ||| ||||||||||    
T  15348113 acctcacttagggtgccacatcagcgtagaccgagtcaaaattgaccttgggggccataacttccacagatgcaaaacttag-gggtggttttgtag 15348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 20185090 - 20184916
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||| | ||||||||||||| ||  || |||||||| || | |||||||||||| ||||||| |||||||| |||| ||||||||||||   |||||    
T  20185090 taacacgcgacacctcacttagg-tgctacatcagcgtagaccgagtcaaaattgaccttgggggccaaaactggcacatatgcaaaacttaagaggcgg 20184992  T
Q  1376 ttttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaagcc 1448  Q
    ||||||||         ||||| | || ||||||||||||||| ||||||||||| | |||||||| |||||||||    
T  20184991 ttttgtagtttttttttcttagggggctaaaatcgcaactttggaaaagttagggagctaaaactgttattaagcc 20184916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1295 - 1446
Target Start/End: Complemental strand, 47909848 - 47909696
Alignment:
Q  1295 tagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnnctta 1394  Q
    |||||| ||| ||||||||| || | |||||||||||| |||   | ||||| || |||||||||||||||||| ||||| ||||||||       ||||    
T  47909848 tagggtatcatgtcagcgtagaccgagtcaaaattgaccttgaaagccaaaattgccacagatgcaaaacttagggggcgattttgtagtttttttctta 47909749  T
Q  1395 gagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaag 1446  Q
    | | || |||||||||||||||  ||||||| |||| ||||||||||||||||    
T  47909748 gggggctaaaatcgcaactttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 4049968 - 4049907
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||| |||||||||||||||||||||||| ||||||| |||||||||    
T  4049968 tacaaaaccgccccctaaggtttgcaactgtagcagttttggccccccaaggccaatttttg 4049907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 5172770 - 5172709
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||||||||||||||||||||||||||| | ||||||| |||||||||    
T  5172770 tacaaaaccgccccctaagttttgcaactgtagcagttttggtcccccaaggccaatttttg 5172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1194 - 1257
Target Start/End: Complemental strand, 20185163 - 20185100
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgat 1257  Q
    ||||||| |||| | ||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  20185163 tacaaaaccgcctcctaagttttgcaactgtagcagttttggccccccaaggctaatttttgat 20185100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1277 - 1367
Target Start/End: Complemental strand, 8074047 - 8073957
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    |||||||| |||||||||||| ||| |||||||||| | || |  ||||||||| | ||||||| |||||||| |||| ||||||||||||    
T  8074047 aacacgtggcacctcacttagagtgccacgtcagcgaagaccgaatcaaaattggccttgggggccaaaactgccacatatgcaaaactta 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Original strand, 36903531 - 36903581
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36903531 gccaaaatcgcaacattgaaaaagttagggggttaaaactgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1298 - 1383
Target Start/End: Complemental strand, 3382013 - 3381929
Alignment:
Q  1298 ggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||| |||||||| || | ||||||||| || ||||||  |||||||| |||| ||||||||||||| ||||||||||||||    
T  3382013 ggtgtcacatcagcgtacaccgagtcaaaattaaccttggggc-caaaactgccacatatgcaaaacttagggggcggttttgtag 3381929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1403 - 1448
Target Start/End: Original strand, 14247569 - 14247614
Alignment:
Q  1403 aaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  14247569 aaatcgcaactttggaaaagttaggggataaaactgctattaagcc 14247614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 15348203 - 15348143
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  15348203 tacaaaaccgccccctaagttttgcaaccgtagcagttttggcc-cccaaggccaatttttg 15348143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1402 - 1448
Target Start/End: Complemental strand, 42256630 - 42256582
Alignment:
Q  1402 aaaatcgcaactttgaaaaagtta--ggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  42256630 aaaatcgcaactttgaaaaagttaggggggttaaaactgctattaagcc 42256582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1400 - 1448
Target Start/End: Original strand, 12905791 - 12905839
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  12905791 ccaaaatcgcaactttgaaaaagttaggggccaaaactactattaagcc 12905839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1194 - 1254
Target Start/End: Original strand, 18186507 - 18186567
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaattttt 1254  Q
    ||||||| |||| | |||||||||||||| |||||||||||||||| |||| |||||||||    
T  18186507 tacaaaaccgcctcctaagttttgcaactatagcagttttggcctctcaagatcaattttt 18186567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1203 - 1255
Target Start/End: Complemental strand, 35250357 - 35250305
Alignment:
Q  1203 gccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||| ||||||||||||||||||||||||||||| ||||||  |||||||||    
T  35250357 gccccctaagttttgcaactgtagcagttttggccccccaagaccaatttttg 35250305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1302 - 1370
Target Start/End: Complemental strand, 45718046 - 45717978
Alignment:
Q  1302 tcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagag 1370  Q
    |||||||| |||| || | |||||||||||  || ||||||||||||| ||||||||||||||||||||    
T  45718046 tcacgtcaacgtagaccgagtcaaaattgatcttaggggtcaaaactgacacagatgcaaaacttagag 45717978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Complemental strand, 28472624 - 28472574
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||||    
T  28472624 tacaaaaccgcccc-taagttttgcaactgtagcagttttggccccccaagg 28472574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 18504472 - 18504426
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||| |||||||||||||||||||||| | |||||||||    
T  18504472 taagttttgcaattgtagcagttttggcctcccaatgccaatttttg 18504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1298 - 1429
Target Start/End: Original strand, 28350307 - 28350436
Alignment:
Q  1298 ggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagag 1397  Q
    |||||||||| |||||| || | |||||||||| | ||||||  |||||||| ||||| |||||||||||| ||||||||||||||       ||||| |    
T  28350307 ggtgtcacgttagcgtagacagagtcaaaattggccttggggc-caaaactgccacaggtgcaaaacttag-gggcggttttgtagtttttttcttaggg 28350404  T
Q  1398 tgccaaaatcgcaactttgaaaaagttagggg 1429  Q
     |||||| ||||||||| |  |||||||||||    
T  28350405 ggccaaagtcgcaacttcgtgaaagttagggg 28350436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 36580341 - 36580401
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||| |||||||||||||||||||||||||||||  |||||| |||||||||    
T  36580341 tacaaaaccgtcccctaagttttgcaactgtagcagttttggcc-accaaggccaatttttg 36580401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1321 - 1448
Target Start/End: Complemental strand, 28350245 - 28350116
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaa 1419  Q
    ||||||||||   ||||||| |||||||| |||||  ||||||||||| ||||||||||||||        ||||| | |||||||||| ||||| |  |    
T  28350245 gtcaaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtga 28350146  T
Q  1420 aagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||| |||| ||||||||||||||||||    
T  28350145 aagttagggggctaaaactgctattaagcc 28350116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Original strand, 10097623 - 10097665
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    |||||||||||||| |||||||||||| ||||||||||||||||    
T  10097623 tacaaaatcgcccc-taagttttgcaattgtagcagttttggcc 10097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Original strand, 14247361 - 14247404
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  14247361 tacaaaaccgccccataagttttgcaattgtggcagttttggcc 14247404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Original strand, 15029129 - 15029187
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| |||||| |||||||||||  ||| |||||||||||| |||||||||||||||    
T  15029129 tacaaaaccgccccctaagttttgcacatgtggcagttttggcc-cccaaggtcaatttt 15029187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 16879408 - 16879373
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16879408 acacgtggcacctcacttagggtgtcacgtcagcgt 16879373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1209 - 1240
Target Start/End: Complemental strand, 19645034 - 19645003
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcc 1240  Q
    ||||||||||||||||||||||||||||||||    
T  19645034 taagttttgcaactgtagcagttttggcctcc 19645003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1294 - 1373
Target Start/End: Complemental strand, 20505226 - 20505147
Alignment:
Q  1294 ttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggc 1373  Q
    |||||||| |||||||||||| || | |||||||||||| |||| |   ||||| ||| |||||||||||||||| ||||    
T  20505226 ttagggtgccacgtcagcgtagaccgagtcaaaattgaccttggagtctaaaaccgtcgcagatgcaaaacttagggggc 20505147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1325
Target Start/End: Complemental strand, 38879333 - 38879286
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaa 1325  Q
    ||||||| |||||||||||||||| |||||||||||  ||||||||||    
T  38879333 acacgtgacacctcacttagggtgccacgtcagcgttgactgggtcaa 38879286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 41243889 - 41243846
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    |||||||||||||  |||||||||||||||||| ||||||||||    
T  41243889 tacaaaatcgcccactaagttttgcaactgtagtagttttggcc 41243846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1233
Target Start/End: Original strand, 45697560 - 45697599
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagtttt 1233  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  45697560 tacaaaattgccccataaattttgcaactgtagcagtttt 45697599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1400 - 1445
Target Start/End: Original strand, 6792061 - 6792107
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    ||||||||||||||||| |||||||| |||| |||||||||||||||    
T  6792061 ccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 6792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1400 - 1448
Target Start/End: Complemental strand, 3318367 - 3318318
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||| ||||||| ||||| ||||||| ||||||||||    
T  3318367 ccaaaatcgcaactttggaaaagttaaggggctaaaactcctattaagcc 3318318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1276 - 1313
Target Start/End: Complemental strand, 3319216 - 3319179
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  3319216 taacacgtggcacctcacttagggtgccacgtcagcgt 3319179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1276 - 1373
Target Start/End: Complemental strand, 5172685 - 5172588
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggc 1373  Q
    |||||| || ||||||||||||||||  | |||| |||| || | |||| |||||   ||||| |  ||||||| |||||||||||||||||||||||    
T  5172685 taacacatggcacctcacttagggtgcaatgtcaacgtagaccgagtcataattggttttgggagctaaaactgccacagatgcaaaacttagagggc 5172588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 15107060 - 15107120
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||| | ||| |||||||||||||| |||||||||||||| ||||||  |||||||||    
T  15107060 tacaaaattgtcccttaagttttgcaactatagcagttttggcc-cccaagcccaatttttg 15107120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1286 - 1367
Target Start/End: Complemental strand, 19644966 - 19644885
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||||||||| |||| |||||||||||| ||||||| |||||||   |||| || ||||||||  |||| || ||||||||    
T  19644966 cacctcacttacggtgccacgtcagcgtagactgggttaaaattggtcttggaggccaaaactgctacagttgtaaaactta 19644885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1294 - 1363
Target Start/End: Complemental strand, 23826175 - 23826106
Alignment:
Q  1294 ttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaa 1363  Q
    |||||| |||||||||||||| || |  ||||||||||  ||||||| |||||||| |||| ||||||||    
T  23826175 ttagggcgtcacgtcagcgtagaccgaatcaaaattgatcttgggggccaaaactgccacaaatgcaaaa 23826106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 28785825 - 28785886
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||  | |||| |||||||||    
T  28785825 tacaaaaccgccccctaagttttgcaactgttgtagttttggcccacaaaggccaatttttg 28785886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1297 - 1382
Target Start/End: Original strand, 36801761 - 36801846
Alignment:
Q  1297 gggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||| |||||||||| | |||  ||||||| ||||||||||||||||||||| || |||| ||| || ||| |||  ||||||||    
T  36801761 gggtgccacgtcagcgaagactaagtcaaaagtgacattgggggtcaaaactgccaaagatccaatacatagggggttgttttgta 36801846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 40872234 - 40872295
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||||||||||||| |||||||||||||| ||||  |||| | |||||||||    
T  40872234 tacaaaaccgtcccataagttttgtaactgtagcagtttaggccctccaatgccaatttttg 40872295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 8e-31; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 27904623 - 27904797
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| || | ||||||||||   ||||||| |||||||| ||||  |||||||||||| ||||||    
T  27904623 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggacaaaactgccacaagtgcaaaacttagggggcgg 27904722  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    ||||||||        ||||  | |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  27904723 ttttgtagttttttttcttacggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagcc 27904797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 3e-30
Query Start/End: Original strand, 1194 - 1448
Target Start/End: Original strand, 32391786 - 32392033
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcacctcac 1293  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |                  ||||| ||| ||||||||    
T  32391786 tacaaaatcaccccctaagttttgcaactgtagcagttttggccccccaaggccaatttttggtagaaaaaaa---------taacatgtggcacctcac 32391876  T
Q  1294 ttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nnnnnnnct 1392  Q
    |||||||| |||||||||||| || | ||||||||||   ||||  ||||||||||||||| ||||||||||||  ||||||||||||||        ||    
T  32391877 ttagggtgccacgtcagcgtagaccgagtcaaaattggtcttggatgtcaaaactgtcacacatgcaaaacttaaggggcggttttgtagttttttttct 32391976  T
Q  1393 tagagtgccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaagcc 1448  Q
    ||| | || ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  32391977 tagggggctaaaatcgcaactttgaaaaagttagggagttaaaacagctattaagcc 32392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 12406180 - 12406354
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| |||| |||||||||| | ||||||| |||||||| |||||||| ||||||||| ||||||    
T  12406180 taacacgtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcgg 12406279  T
Q  1376 ttttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||| |         ||||| | ||||||||| ||||||||||||||||| |||| ||||| ||||||||||||    
T  12406280 ttttgttgtttttttttcttag-gggccaaaatctcaactttgaaaaagttagggggctaaaattgctattaagcc 12406354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 2e-28
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 3333841 - 3334015
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||| || |||||||||||||||| |||||||||||| || | |||||||||||| ||||||| |||||||| |||| ||||||||||||  | ||||    
T  3333841 taacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttatggagcgg 3333940  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||        ||||| | |||||||||||||||||| |||||||| |||| ||||||| ||||||||||    
T  3333941 ttttgtagtttttcttcttagggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1286 - 1381
Target Start/End: Complemental strand, 2974797 - 2974702
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgt 1381  Q
    |||||||||||||||| |||||||||||| || | |||||||||| ||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  2974797 cacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 25910897 - 25910721
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| |||||||||||| || | |||||||||||| ||||||| |||||||| ||||| ||||||| |||||||| ||    
T  25910897 taacatgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgggggccaaaactgccacaggtgcaaaatttagagggtgg 25910798  T
Q  1376 ttttgtag----nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||||           ||||| | ||||||||| ||||||| | ||||||||||| |||||||| |||||||||    
T  25910797 ttttgtagtttttgtttttcttagggggccaaaatcacaactttaagaaagttagggggtaaaactgttattaagcc 25910721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1279 - 1445
Target Start/End: Complemental strand, 18403157 - 18402989
Alignment:
Q  1279 cacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttt 1378  Q
    |||||| |||||||||||||||| ||||||| |||| |||| ||||||||||   |||||||||||||||| || ||||||||||||||| | | | |||    
T  18403157 cacgtgacacctcacttagggtgccacgtcaacgtagactgagtcaaaattggtcttgggggtcaaaactgccagagatgcaaaacttagggagtgattt 18403058  T
Q  1379 tgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaa 1445  Q
    |||||         ||||||| ||||||||  ||||||||||||| ||||||||||||||| |||||||    
T  18403057 tgtagtttttttttcttagagggccaaaattacaactttgaaaaaattaggggttaaaactactattaa 18402989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 35166469 - 35166297
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| ||||||||||||||||||| ||||||||| || | ||||||||||||||||  || |||||| | ||||  |||||||||||| |||||     
T  35166469 taacatgtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattgacattgaaggccaaaaccgccacatgtgcaaaacttagggggcga 35166370  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||||       ||||| | | ||||||||||| |||| ||||||||  || ||||||||||||||||||    
T  35166369 ttttgtagtttttttcttagggggtcaaaatcgcaattttggaaaagttaaaggctaaaactgctattaagcc 35166297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1276 - 1447
Target Start/End: Original strand, 43098167 - 43098337
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||| | |||||||||||||||| |||||||||||| |||| ||||||||||| || ||||| ||||||||  |||| |||||||||||| | ||||    
T  43098167 taacacgcggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattgatatcgggggccaaaactgctacaggtgcaaaacttag-gcgcgg 43098265  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctattaagc 1447  Q
    ||||||||        |||| | || ||||||| ||||||||||||||||||||  |||||||||||||||||    
T  43098266 ttttgtagttttttt-ttagggggcaaaaatcgtaactttgaaaaagttaggggactaaaactgctattaagc 43098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Original strand, 40276170 - 40276276
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||| ||| ||||||||||||||||||||||||||||| || |||||||||||  | ||||||||||||| || |||| ||||||||||||| || ||||    
T  40276170 aacatgtggcacctcacttagggtgtcacgtcagcgtagaccgggtcaaaattagccttgggggtcaaaattgccacatatgcaaaacttaggggacggt 40276269  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  40276270 tttgtag 40276276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Complemental strand, 31080650 - 31080480
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| ||||||||| || || | || ||||||| | ||||||| |||||||| |||||||||||||||||| ||| ||    
T  31080650 taacacgtggcacctcacttagggtgccacgtcagcatagaccgagttaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtgg 31080551  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaa 1445  Q
    ||||||||        ||||   | |||||||||||||||| ||||||||| ||| |||||||| ||||||    
T  31080550 ttttgtagttttttttttaggaggtcaaaatcgcaactttggaaaagttagagggctaaaactgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 9852960 - 9852853
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| |    |||||||||| | ||||| | |||||||| |||||||||||||||||| |||||     
T  9852960 taacacgtggcacctcacttagggtgccacgtcagcgtagatcaagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcga 9852861  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  9852860 ttttgtag 9852853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1297 - 1383
Target Start/End: Original strand, 19131661 - 19131747
Alignment:
Q  1297 gggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||| |||||||||||| || | |||||||||| | || |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  19131661 gggtgccacgtcagcgtagaccgagtcaaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggttttgtag 19131747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 19340828 - 19340889
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  19340828 tacaaaatcgccccctaagttttgcaactgtagcagttttggccccccaagatcaatttttg 19340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 22300774 - 22300601
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| ||||||| |||| || | ||||||||||   ||||  |||||||||| |||| || |||||||||  || |||    
T  22300774 taacatgtggcacctcacttagggtgccacgtcaacgtagaccgagtcaaaattggtcttggaagtcaaaactgccacatatacaaaacttaagggacgg 22300675  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    ||||||||        |||| |||||||||||||||||||  ||||||||| ||| ||||||| ||||||||||    
T  22300674 ttttgtagttttttttttagggtgccaaaatcgcaactttagaaaagttagagggctaaaactactattaagcc 22300601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1363
Target Start/End: Complemental strand, 26563162 - 26563075
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaa 1363  Q
    ||||||||| |||||||| ||||||| |||||||||| |||| | |||||||||||| ||||||| ||||| || |||||||||||||    
T  26563162 taacacgtggcacctcacgtagggtgccacgtcagcggaaaccgagtcaaaattgaccttgggggccaaaattgccacagatgcaaaa 26563075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 36798344 - 36798170
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||| ||| |||||||| ||| || | |||||| | | | ||||||| |||||||| |||||||||||||||||| ||| ||    
T  36798344 taacatgtggcacctcacttagagtgccacgtcagtgtagaccgagtcaaattggtc-ttgggggccaaaactgccacagatgcaaaacttagggggtgg 36798246  T
Q  1376 ttttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggt-taaaactgctattaagcc 1448  Q
    ||||||||         ||||| | |||||||| ||||||||| |||||||| |||| ||||||||||||||||||    
T  36798245 ttttgtagtttttttttcttagggggccaaaattgcaactttggaaaagttaagggtctaaaactgctattaagcc 36798170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1288 - 1446
Target Start/End: Original strand, 37897870 - 37898029
Alignment:
Q  1288 cctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnn 1387  Q
    ||||||||| ||||  |||||||| || || | ||||||||||   |||| || |||||||| |||| ||||||||||||| ||||||||||||||        
T  37897870 cctcacttaaggtgctacgtcagcatagaccgagtcaaaattggtcttggaggccaaaactgccacatatgcaaaacttag-gggcggttttgtagtttt 37897968  T
Q  1388 nnn-cttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaag 1446  Q
        ||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  37897969 ttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaag 37898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Complemental strand, 20512370 - 20512264
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| || || |||||| || | ||||||||||   |||||||||||||||  ||||| |||||||||||| |||| |    
T  20512370 taacacgtggcacctcacttagggtgccatgttagcgtagaccgagtcaaaattggtcttgggggtcaaaactaccacaggtgcaaaacttagggggcag 20512271  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  20512270 ttttgta 20512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1276 - 1446
Target Start/End: Original strand, 20629884 - 20630057
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| |  | ||||||||||    ||| || |||||||  |||| ||||||||||||| ||||||    
T  20629884 taacacgtggcacctcacttagggtgccacgtcagcgtagatcgagtcaaaattggtcctggaggccaaaacttccacaaatgcaaaacttagggggcgg 20629983  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg--ggttaaaactgctattaag 1446  Q
    ||||||||        ||||  | ||||||||| |||||||| ||||||||||  || ||||||||||||||||    
T  20629984 ttttgtagttttttttcttaaggggccaaaatcacaactttggaaaagttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 40276086 - 40276147
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  40276086 tacaaaatcgtcccctaagttttgcaactgtagcagttttggccccccaaggccaatttttg 40276147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1286 - 1448
Target Start/End: Complemental strand, 25363989 - 25363825
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnn 1385  Q
    ||||||| ||||||||||||||||||||| || |  ||||||||||| || |||| |||||||  ||||  |||||||||||| || | ||||||||       
T  25363989 cacctcatttagggtgtcacgtcagcgtagaccgaatcaaaattgacttttggggccaaaactaccacaattgcaaaacttaggggacagttttgtaact 25363890  T
Q  1386 nnnnn--cttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
           |||||   ||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  25363889 tttttttcttaggaggccaaaatcacaactttaaaaaagttaggggctaaaactgctattaagcc 25363825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Complemental strand, 28446178 - 28446087
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||||||| |||||||| |||||||||| ||||||||| || | |||||||||| | || |||| |||| |||||||| ||||||||||||    
T  28446178 taacacgtgacacctcacgtagggtgtcaggtcagcgtataccgagtcaaaattggccttaggggccaaagctgtcacaaatgcaaaactta 28446087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 21066586 - 21066525
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| ||| || ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  21066586 tacaaaaccgctccttaagttttgcaactgtagcagttttggccccccaaggccaatttttg 21066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1286 - 1383
Target Start/End: Original strand, 30604237 - 30604334
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||||||| |||||||||||| || | |||||||||| | |   ||  |||||||| ||||| |||||||||||| ||||||||||||||    
T  30604237 cacctcacttagggtgccacgtcagcgtagacagagtcaaaattggcctacaggtgcaaaactgccacaggtgcaaaacttagggggcggttttgtag 30604334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 6130337 - 6130383
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  6130337 taagttttgcaactgtagcagttttggccccccaaggccaatttttg 6130383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Complemental strand, 16132918 - 16132812
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||| || ||||||||||||| || ||| |||||||| ||   |||||||||| | ||||||  |||||||| || || |||||||||||| ||||||    
T  16132918 taacacatggcacctcacttaggatgccacatcagcgtagacaaagtcaaaattggccttggggaccaaaactgccataggtgcaaaacttagggggcgg 16132819  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  16132818 ttttgta 16132812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1280 - 1445
Target Start/End: Complemental strand, 24405659 - 24405493
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| |||||||||||||| | ||||| ||| || || | |||||||||| |  |||||  |||||||| || |||||||||||||||  |||||||||    
T  24405659 acgtggcacctcacttagggagccacgttagcatagaccgagtcaaaattggccatggggc-caaaactgccaaagatgcaaaacttagttggcggtttt 24405561  T
Q  1380 gtagnnnnnnn-cttagagtgccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctattaa 1445  Q
    ||||        || || | | |||||||||||||||||||||||||||||  |||||||||||||||    
T  24405560 gtagttttttttctcagggagtcaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 24405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Complemental strand, 26702609 - 26702504
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| ||||||||  || || |  |||||||||   ||||||| |||||||| |||| ||||||||||| | ||||||    
T  26702609 taacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcgg 26702511  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  26702510 ttttgta 26702504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Complemental strand, 26972342 - 26972237
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| ||||||||  || || |  |||||||||   ||||||| |||||||| |||| ||||||||||| | ||||||    
T  26972342 taacacgtggcacctcacttagggtgccacgtcaggatagaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcgg 26972244  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  26972243 ttttgta 26972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1196 - 1254
Target Start/End: Complemental strand, 36798420 - 36798362
Alignment:
Q  1196 caaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaattttt 1254  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||||| | ||||||||    
T  36798420 caaaaccgccccctaagttttgcaactgtagcagttttggccccccaaagccaattttt 36798362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 3999153 - 3999214
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||| |  |||||||||||||||||||||||||||||| | ||||| |||||||||    
T  3999153 tacaaaatcgacttataagttttgcaactgtagcagttttggcccctcaaggccaatttttg 3999214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1336 - 1448
Target Start/End: Complemental strand, 12406154 - 12406041
Alignment:
Q  1336 gggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnn-cttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaa 1433  Q
    ||||| ||||||||| |||| |||||||||||| ||||||||||||||        ||||| | ||||||||||||||||||  ||||||| |||| |||    
T  12406154 gggggccaaaactgt-acagttgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggggctaa 12406056  T
Q  1434 aactgctattaagcc 1448  Q
    |||||||||||||||    
T  12406055 aactgctattaagcc 12406041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 12406109 - 12406169
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  12406109 tacaaaaccgccccctaagttttgcaactgta-cagttttggccccccaaggccaatttttg 12406169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 28446250 - 28446190
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  28446250 tacaaaaccgtcccctaagttttgcaactgtagcagttttggcc-cccaagatcaatttttg 28446190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Original strand, 3999238 - 3999330
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||| ||| ||||||||||| |||| |||||||||||| ||   |||||||||| | ||||||| |||||||| |||| ||| |||||||||    
T  3999238 taacatgtggcacctcacttaaggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccacatatgtaaaacttag 3999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Original strand, 19340904 - 19340996
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||| ||||||| |||||||| ||||||| |||  || | |||||||||| | ||||||   ||||||| ||||||||||||||||||    
T  19340904 taacacgtggcacctcatttagggtgccacgtcaacgttgaccgagtcaaaattggctttggggactaaaactgccacagatgcaaaacttag 19340996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Original strand, 9852854 - 9852912
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    |||||||||||||| ||||||||||| |||| |||||||||| ||||||||| |||||||    
T  9852854 tacaaaatcgccccctaagttttgcatctgtggcagttttgg-ctcccaaggccaatttt 9852912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1202 - 1257
Target Start/End: Complemental strand, 9853023 - 9852969
Alignment:
Q  1202 cgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgat 1257  Q
    |||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  9853023 cgccccctaagttttgcaactgtatcagttttggcc-cccaaagtcaatttttgat 9852969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Original strand, 30603680 - 30603731
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    |||||||  ||||| ||||||||||||||||||||||||||||| |||||||    
T  30603680 tacaaaactgccccctaagttttgcaactgtagcagttttggccccccaagg 30603731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 3333774 - 3333820
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||||    
T  3333774 taagttttgcaaatgtagcagttttggccccccaaggccaatttttg 3333820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 22300843 - 22300797
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||    
T  22300843 taagttttgcaactgtagcagttttggccctccaaggccaatttttg 22300797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1202 - 1255
Target Start/End: Complemental strand, 2974871 - 2974818
Alignment:
Q  1202 cgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||| ||||||||||| ||||||||||||||||| || |||| |||||||||    
T  2974871 cgccccctaagttttgcacctgtagcagttttggccccctaaggccaatttttg 2974818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1243
Target Start/End: Complemental strand, 20512445 - 20512396
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaa 1243  Q
    |||||||||||||  |||||||||||||| |||||||||||||| |||||    
T  20512445 tacaaaatcgccctctaagttttgcaactttagcagttttggccccccaa 20512396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 31080726 - 31080666
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||  ||||||||||||||||||||||||| |||||| |||| |||||||||    
T  31080726 tacaaaaccgccctctaagttttgcaactgtagcagtttt-gcctcctaaggccaatttttg 31080666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1400 - 1448
Target Start/End: Original strand, 36798441 - 36798490
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  36798441 ccaaaatcgcaactttgagaaagttagggggctaaaactgctattaagcc 36798490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1276 - 1447
Target Start/End: Complemental strand, 24779447 - 24779276
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| || ||||||| ||||| |||||||||||| || | ||||||||||   |||||   |||||||| || ||| |||||||||||| | |||    
T  24779447 taacacgtgacaactcacttggggtgccacgtcagcgtagaccgagtcaaaattggttttgggaaccaaaactgccatagaggcaaaacttaga-gacgg 24779349  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagc 1447  Q
    ||||||||        ||||| | | ||||||||||||||| ||||||||||| || ||||||| |||||||||    
T  24779348 ttttgtagttttttttcttagtg-gacaaaatcgcaactttaaaaaagttaggaggctaaaactactattaagc 24779276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1286 - 1374
Target Start/End: Original strand, 34320097 - 34320185
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcg 1374  Q
    |||| |||| |||||| |||||||| ||| ||   |||||||||||| ||||||| |||||||| |||| ||| ||||||||| |||||    
T  34320097 caccccactaagggtgccacgtcagtgtagaccaagtcaaaattgactttgggggccaaaactgccacaaatgtaaaacttagggggcg 34320185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1307 - 1383
Target Start/End: Complemental strand, 35877431 - 35877356
Alignment:
Q  1307 tcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||| |||| |||||||||||  ||||||||| |||||| |||| || ||||||||||| | |||||||||||    
T  35877431 tcagcgtagactgagtcaaaattgatcttgggggtc-aaactgccacaaatacaaaacttagatgacggttttgtag 35877356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1276 - 1447
Target Start/End: Complemental strand, 39574409 - 39574240
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| || | ||| ||||||   ||||||| |||||||| |||  ||||||||||||| ||| |     
T  39574409 taacatgtggcacgtcacttatggtgtcacgtcagcgtagaccgagtc-aaattggtcttgggggccaaaactgccac--atgcaaaacttagggggtga 39574313  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagc 1447  Q
    |||| |||       ||||| | |||||||||||||||| |  |||||||| |||  ||||||||||||||||    
T  39574312 ttttatagtttttttcttagggagccaaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1401 - 1448
Target Start/End: Complemental strand, 40132952 - 40132904
Alignment:
Q  1401 caaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  40132952 caaaatcgcaactttgaaaaagttagaggactaaaactgctattaagcc 40132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1253
Target Start/End: Complemental strand, 3333947 - 3333889
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttt 1253  Q
    ||||||| ||| ||||||||||||||  ||| |||||||||||| |||||||||||||||    
T  3333947 tacaaaaccgctccataagttttgcatatgtggcagttttggcc-cccaaggtcaatttt 3333889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 4096623 - 4096588
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4096623 acacgtggcacctcacttagggtgtcacgtcagcgt 4096588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1276 - 1339
Target Start/End: Original strand, 6130398 - 6130461
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggg 1339  Q
    ||||| ||| |||||||||||||||||||||||| | || || | |||||||||||| ||||||    
T  6130398 taacatgtggcacctcacttagggtgtcacgtcaacatagaccgagtcaaaattgaccttgggg 6130461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1399 - 1445
Target Start/End: Complemental strand, 8284205 - 8284158
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  8284205 gccaaaatcgcaactttggaaaagttatggggttaaaattgctattaa 8284158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1324 - 1383
Target Start/End: Original strand, 9852973 - 9853032
Alignment:
Q  1324 aaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||| ||||||| ||||||||  |||| |||||||||||| ||||||||| ||||    
T  9852973 aaaattgactttgggggccaaaactgatacagttgcaaaacttagggggcggtttagtag 9853032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 10029213 - 10029248
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10029213 acacgtggcacctcacttagggtgtcacgtcagcgt 10029248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 35166539 - 35166496
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||    
T  35166539 tacaaaatcaccccctaagttttgcagctgtagcagttttggcc 35166496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 35306843 - 35306878
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  35306843 acacgtggcacctcacttagggtgtcacgtcagcgt 35306878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1204 - 1255
Target Start/End: Complemental strand, 39574474 - 39574423
Alignment:
Q  1204 ccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||| |||||||||||  |||||  ||||||||||    
T  39574474 ccccataagttttgcaactgtggcagttttggcaccccaatatcaatttttg 39574423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1298 - 1368
Target Start/End: Original strand, 40133071 - 40133140
Alignment:
Q  1298 ggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    |||| |||||||| ||| || |||||||||||| |||| |||| ||||||||||||| ||| |||||||||    
T  40133071 ggtgccacgtcagggtagaccgggtcaaaattggcatt-ggggccaaaactgtcacaaatgtaaaacttag 40133140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1342 - 1383
Target Start/End: Original strand, 31080686 - 31080727
Alignment:
Q  1342 caaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  31080686 caaaactgctacagttgcaaaacttagagggcggttttgtag 31080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1277 - 1314
Target Start/End: Original strand, 31157043 - 31157080
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgta 1314  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  31157043 aacaagtggcacctcacttagggtgtcacgtcagcgta 31157080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1276 - 1313
Target Start/End: Original strand, 34734212 - 34734249
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  34734212 taacacgtggcacctcacctagggtgtcacgtcagcgt 34734249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 35877526 - 35877465
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||||||||||||||||| | |||||| ||| ||| || |||||||||    
T  35877526 tacaaaaccgccccctaagttttgcaactgtaacggttttgaccttccagggccaatttttg 35877465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 8e-31; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 8e-31
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 2837073 - 2836899
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||| ||| |||| |||||||||| | ||||||| ||||||| ||||| ||||||||||||| ||||||    
T  2837073 taacacgtggcacctcacttagggtgccacgtcagtgtagactgagtcaaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcgg 2836974  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||        ||| | | |||||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  2836973 ttttgtagttttttttctttgggggccaaaatcgcagctttggaaaagttagggggttaaaactgttattaagcc 2836899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 44356538 - 44356710
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| ||||| | |||| ||   ||||||||||   ||||||| |||||||| |||| ||||||||||||| ||||||    
T  44356538 taacacgtgacacctcacttagggtgccacgttatcgtagaccaagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcgg 44356637  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    |||||||        |||||   ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  44356638 ttttgtaatttttttcttaggcggccaaaatcgcaactttgagaaagttaggggctaaaactgctattaagcc 44356710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1292 - 1448
Target Start/End: Original strand, 8965672 - 8965824
Alignment:
Q  1292 acttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnnc 1391  Q
    |||||||||| ||| ||| |||| || | |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||| |||       |    
T  8965672 acttagggtgccacatcaacgtagaccgagtcaaaattgacattggggaccaaaactgccacagatgcaaaacttagggggcggttttatag--tttttc 8965769  T
Q  1392 ttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||  || ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  8965770 tt--agggccaaaatcgcaactttgaaaaaattaggggttaaaattgctattaagcc 8965824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Complemental strand, 53312460 - 53312286
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||||||| |||||||||||| |||| ||| |||||| | ||||||| |||||||| ||||  ||||||| |||| ||| |||    
T  53312460 aacacgtggcacctcacttagggtgccacgtcagcgtagactgagtccaaattggccttgggggccaaaactgccacatgtgcaaaatttagggggtggt 53312361  T
Q  1377 tttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||         ||||| | ||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  53312360 tttgtagtttgtttttcttagggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagcc 53312286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 5e-26
Query Start/End: Original strand, 1276 - 1373
Target Start/End: Original strand, 43074728 - 43074825
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggc 1373  Q
    ||||||||| |||||||||||||||| |||||||||||| |||| |||||||||| | ||||||| |||||||| |||||||||||||||||| ||||    
T  43074728 taacacgtggcacctcacttagggtgccacgtcagcgtagactgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggc 43074825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1194 - 1448
Target Start/End: Original strand, 10059751 - 10060013
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcac----c 1289  Q
    ||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |                  ||||||||| |||    |    
T  10059751 tacaaaaccgccccctaagttttgcaactgtagcagttttggtcccccaaggtcaatttttggtaaaaaaaaaattaaaaaataacacgtggcacgcacc 10059850  T
Q  1290 tcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag---nnn 1386  Q
    |||||||||||| ||||||| |||| || | |||||||||| | ||| ||| |||||||| |||||||||||||||||| ||||||||||||||          
T  10059851 tcacttagggtgccacgtcaacgtagaccgagtcaaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggttttgtagtttttt 10059950  T
Q  1387 nnnncttagagtgccaaaatcgcaactttgaaaaagttaggggt-taaaactgctattaagcc 1448  Q
        ||||  | || |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  10059951 ttttcttaaggggcaaaaatcgcaactttgaaaaaattaggggtctaaaactgctattaagcc 10060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 14449424 - 14449599
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||||| |||| ||||||||||||||| | |||||||||| | ||||||| |||||||| |||| ||||||||||||| | ||||    
T  14449424 taacacgtggcacctcacttatggtgccacgtcagcgtaaaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcgg 14449523  T
Q  1376 ttttgtag--nnnnnnnctt-agagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||         ||| |||| |||||||||||||||||| |||||||| |||| ||||||| ||||||||||    
T  14449524 ttttgtagttttttttccttaagag-gccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 20112290 - 20112463
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||| ||| |||||||||||  || | |||||||||| | ||||||| |||||||| |||| ||||||||||| | ||||||    
T  20112290 taacacgtggcacctcacttagagtgccacgtcagcgttgaccgagtcaaaattggctttgggggccaaaactgccacatatgcaaaactttgggggcgg 20112389  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    ||||||||       ||| | | |||||||||||||||||| |||||||||  || |||||||| |||||||||    
T  20112390 ttttgtagtatttttctttgggggccaaaatcgcaactttggaaaagttagaaggctaaaactgttattaagcc 20112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1287 - 1448
Target Start/End: Complemental strand, 2016954 - 2016791
Alignment:
Q  1287 acctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nn 1385  Q
    ||||||||||||||| |||||||||||| || | |||||||||| | ||||||| |||||||| ||||  |||||||||||| |||| |||||||||       
T  2016954 acctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtct 2016855  T
Q  1386 nnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
         ||| ||| |||||||||||||||||| |||||||| |||| |||||||||||| |||||    
T  2016854 tttttctttgagggccaaaatcgcaactttggaaaagttagggggctaaaactgctatcaagcc 2016791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Complemental strand, 29697695 - 29697590
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| | || ||   |||||||| |||||||||||||||||| ||||||    
T  29697695 taacacgtgacacctcacttagggtgccacgtcagcgtagactgggtcaaaattggcctt-ggaaccaaaactgccacagatgcaaaacttagggggcgg 29697597  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  29697596 ttttgta 29697590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 1420684 - 1420858
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||  || | |||||||||| | |||||||||| ||||| |||| ||||||||||||  ||||||    
T  1420684 taacacgtggcacctcacttagggtgccacgtcagcgttgaccgagtcaaaattggccttgggggtcataactgccacaaatgcaaaacttatggggcgg 1420783  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagcc 1448  Q
    ||||||||        ||||| |  ||||||||| |||||||  |||||| ||||| ||||||||||||||||||    
T  1420784 ttttgtagttctttttcttaggggaccaaaatcgtaactttgggaaagttaaggggctaaaactgctattaagcc 1420858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 52462928 - 52463101
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||| |||||||||||||| ||| || |||| |||||||   ||||||| ||||||||||| |||||||||||||| ||||  |    
T  52462928 taacacgtgacacctcactttgggtgtcacgtcagtgtagaccgggttaaaattggttttgggggccaaaactgtcatagatgcaaaactta-aggggcg 52463026  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||        |||||||  |||||||||||||||||||||| ||| |||| |||||||| |||||||||    
T  52463027 ttttgtagttttttttcttagaggcccaaaatcgcaactttgaaaaaattagggggctaaaactgttattaagcc 52463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1276 - 1379
Target Start/End: Original strand, 4796180 - 4796283
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| |||||||||||| || | |||||||||||  ||||||| |||||||| ||||| ||||||||||| |||||||    
T  4796180 taacaagtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattgattttgggggccaaaactgccacaggtgcaaaacttaaagggcgg 4796279  T
Q  1376 tttt 1379  Q
    ||||    
T  4796280 tttt 4796283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Original strand, 23759715 - 23759887
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||||||| ||||||||| || |  | |||||||||| | |||| || |||||||||||||||| |||||||||| || ||||    
T  23759715 aacacgtggcacctcacttagggtgccacgtcagcttagatcgagtcaaaattggccttggaggccaaaactgtcacagatacaaaacttaggggacggt 23759814  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagcc 1448  Q
    |||||||       ||||| |  ||||||||||||||||   |||||| ||||||||||| || |||||||||    
T  23759815 tttgtagtttttttcttaggggaccaaaatcgcaactttatgaaagttaaggggttaaaattgttattaagcc 23759887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1286 - 1445
Target Start/End: Complemental strand, 47999693 - 47999533
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-n 1384  Q
    ||||||||||| |||| |||||||||||| || |  ||||||||| | || ||||||||||||| |||||||| ||||||||  | ||||||||||||      
T  47999693 cacctcacttaaggtgccacgtcagcgtagaccgaatcaaaattggccttaggggtcaaaactgccacagatgtaaaacttatggagcggttttgtagtt 47999594  T
Q  1385 nnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaa 1445  Q
          ||||| | || |||||||||||||||||||| ||||| |||||||||||||||||    
T  47999593 ttttttcttagggggcaaaaatcgcaactttgaaaaaattaggagttaaaactgctattaa 47999533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1276 - 1427
Target Start/End: Original strand, 53924891 - 53925042
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| || ||||||||||||||||| ||| |||| || | |||||||||||| ||| ||||||||||||||||| ||||||||||||| ||| |     
T  53924891 taacacgtgacatctcacttagggtgtcacatcaacgtagaccgagtcaaaattgaccttgagggtcaaaactgtcacaaatgcaaaacttagggggaga 53924990  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg 1427  Q
    |||| |||       ||||| |  ||||||||||||||||  ||||||||||    
T  53924991 ttttatagtttttttcttaggggaccaaaatcgcaactttagaaaagttagg 53925042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Complemental strand, 27978865 - 27978695
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||| |||| | ||||| |||||||||||| || | |||||||||| | |||||||||||||||| |||| |||||||||||| | ||| |    
T  27978865 taacacgtggcacttcacgtggggtgccacgtcagcgtagaccgagtcaaaattggccttgggggtcaaaactgccacaaatgcaaaacttatatggcag 27978766  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaa 1445  Q
    |||||||        ||||| | | ||||||||||||||||| |||||||| ||| | |||||||||||||    
T  27978765 ttttgtaatttttttcttagggggtcaaaatcgcaactttgagaaagttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1287 - 1383
Target Start/End: Complemental strand, 51362702 - 51362606
Alignment:
Q  1287 acctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||||||||| |||||||| ||| |||| ||||||||||   ||||||| |||||||| |||| ||||||||||||| ||||||||||||||    
T  51362702 acctcacttagggtgccacgtcagtgtagactgagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtag 51362606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1276 - 1446
Target Start/End: Original strand, 21871527 - 21871696
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||| ||||||| |||||| ||||||||| || | || ||||||||  ||||||| |||||||  || |||||||||||||||  |||||    
T  21871527 taacacgtgacaccccacttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcgg 21871626  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaag 1446  Q
    ||||||||        |||| | | ||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  21871627 ttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1276 - 1446
Target Start/End: Original strand, 21927388 - 21927557
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||| ||||||| |||||| ||||||||| || | || ||||||||  ||||||| |||||||  || |||||||||||||||  |||||    
T  21927388 taacacgtgacaccccacttagagtgtcatgtcagcgtagaccgagttaaaattgattttgggggccaaaactaccaaagatgcaaaacttaggaggcgg 21927487  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaag 1446  Q
    ||||||||        |||| | | ||||||||||||||||||||||||| |||| ||||| ||||||||||    
T  21927488 ttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggctaaaattgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1277 - 1367
Target Start/End: Complemental strand, 51371636 - 51371546
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    |||||||| ||||||| |||||||| |||||||| ||| || | ||||||||||||||||||||||||||||| || | ||||||||||||    
T  51371636 aacacgtggcacctcatttagggtgccacgtcagtgtagaccgagtcaaaattgacattgggggtcaaaactgccatatatgcaaaactta 51371546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 25909661 - 25909487
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| || || ||||| |||| |||||||||||| || | |||||||||| | ||||||| ||||||   ||||  |||||||||||| ||||||    
T  25909661 taacacgtggcatcttacttaaggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcgg 25909562  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||| |||        ||||| | ||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  25909561 ttttatagttttttttcttagggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcc 25909487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1292 - 1383
Target Start/End: Original strand, 2654125 - 2654216
Alignment:
Q  1292 acttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||| |||||||||||| ||   |||||||||| | |||||||||||||||| |||| ||||||||||||| |||| |||||||||    
T  2654125 acttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggtcaaaactgccacatatgcaaaacttagggggcagttttgtag 2654216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 12719585 - 12719760
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||| ||||| ||| |||||||| || | ||||||||||   |||| || |||||||| |||||||||||||||||| ||| ||    
T  12719585 taacatgtggcacctcacttggggtgccacatcagcgtagaccgagtcaaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtgg 12719684  T
Q  1376 ttttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||         ||||| | ||||||||  ||||||||  ||||||| |||||||||||||||||||||||    
T  12719685 ttttgtagtttttttttcttagggggccaaaatatcaactttgggaaagttagggggttaaaactgctattaagcc 12719760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1276 - 1369
Target Start/End: Original strand, 34567756 - 34567849
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttaga 1369  Q
    ||||||||| ||| |||||| ||||||||||||||| |  || | ||| |||||||||||||||| |||||||| |||| ||||||||||||||    
T  34567756 taacacgtggcacttcactttgggtgtcacgtcagcattgaccgagtcgaaattgacattgggggccaaaactgccacatatgcaaaacttaga 34567849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 16292442 - 16292335
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacat-tgggggtcaaaactgtcacagatgcaaaacttagagggcg 1374  Q
    ||||||||| |||||||||||||| | |||||||| ||| || | ||||||||| |||| |||||| |||||||| ||||  ||||||||||||||||||    
T  16292442 taacacgtgacacctcacttagggggccacgtcagtgtagaccgagtcaaaatt-acatatgggggccaaaactgccacatgtgcaaaacttagagggcg 16292344  T
Q  1375 gttttgtag 1383  Q
     ||||||||    
T  16292343 attttgtag 16292335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1280 - 1368
Target Start/End: Original strand, 21322855 - 21322943
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||| || |||| |||| ||||| ||| |||||| || | |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  21322855 acgtggcatctcatttagagtgtcgcgttagcgtagaccgagtcaaaattggcattgggggtcaaaactgtcacatatgcaaaacttag 21322943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Complemental strand, 50769537 - 50769366
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||||| ||||||  |||||||||||  | | |||||||||||| || ||||  ||||||| || ||||||||||||||| ||||||    
T  50769537 taacacgtggcacctcactcagggtgctacgtcagcgtaggccgagtcaaaattgaccttaggggctaaaactgccatagatgcaaaacttag-gggcgg 50769439  T
Q  1376 ttttgtag--nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    ||||||||         ||||| | | ||||||||||||||||  ||||||| |||| |||||||||||||||    
T  50769438 ttttgtagtttttttttcttaggggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 21597542 - 21597649
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| |||||||| |||||||||||| || | |||||||||    ||||||| |||||||| |||| |||||||| |||| || |||    
T  21597542 taacacgtggcacctcatttagggtgccacgtcagcgtagaccgagtcaaaattagttttgggggccaaaactgccacatatgcaaaatttaggggacgg 21597641  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  21597642 ttttgtag 21597649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1351 - 1445
Target Start/End: Complemental strand, 2180874 - 2180780
Alignment:
Q  1351 cacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaa 1445  Q
    ||||||||||||| |||| || || ||||||||       ||||| | || |||||||||||||||||||||||| |||||||||||||||||||    
T  2180874 cacagatgcaaaatttaggggacgattttgtagtttttttcttagggagctaaaatcgcaactttgaaaaagttaagggttaaaactgctattaa 2180780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Original strand, 6637203 - 6637373
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| || ||||| ||| || | |||||||||| ||||| ||| |||||||| || | ||||||||||||  |||||     
T  6637203 taacatgtggcacctcacttagggtgccatgtcagtgtagaccgagtcaaaattggcattgtgggccaaaactgccagaaatgcaaaacttaaggggcga 6637302  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaa 1445  Q
    ||||||||       ||||| | || ||||||| |||||||||||| || | ||| ||||| |||||||||    
T  6637303 ttttgtagtttttttcttagggggctaaaatcgaaactttgaaaaaattaaagggctaaaagtgctattaa 6637373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1286 - 1383
Target Start/End: Complemental strand, 11824351 - 11824256
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||||||| ||| |||||||| |||| |||||||||| | || |||  |||||||| |||| ||||||||||||| ||||||||||||||    
T  11824351 cacctcacttagggtgccacatcagcgtagactgagtcaaaattggcctt-gggaccaaaactgccacacatgcaaaacttag-gggcggttttgtag 11824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 42526032 - 42526093
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||||| |||||||||||||||| |||||||||| ||||| |||||||||||    
T  42526032 tacaaaaccgccccattagttttgcaactgtagtagttttggccccccaatgtcaatttttg 42526093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1286 - 1383
Target Start/End: Original strand, 54983983 - 54984080
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||||||| |||||||||||| ||   | |||||||||||||||| | |||||||| ||||  ||||||| |||| ||||| ||||||||    
T  54983983 cacctcacttagggtgccacgtcagcgtagaccaagccaaaattgacattgggtgccaaaactgacacatgtgcaaaatttagggggcgattttgtag 54984080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1321 - 1448
Target Start/End: Original strand, 14060888 - 14061017
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnn-cttagagtgccaaaatcgcaactttgaaa 1419  Q
    |||||||||  | ||||||| |||||||| |||||||| ||||||||| || | |||||||||        ||||| | |||||||||||||||||||||    
T  14060888 gtcaaaattagccttgggggccaaaactgccacagatgtaaaacttaggggacagttttgtagttttttttcttagggagccaaaatcgcaactttgaaa 14060987  T
Q  1420 aagttaggg-gttaaaactgctattaagcc 1448  Q
    || |||||| |||||| |||||||||||||    
T  14060988 aaattagggagttaaagctgctattaagcc 14061017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1209 - 1257
Target Start/End: Original strand, 21597484 - 21597532
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttgat 1257  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  21597484 taagttttgcaactgtagcagttttggcaccccaaggtcaatttttgat 21597532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1203 - 1255
Target Start/End: Original strand, 43074665 - 43074717
Alignment:
Q  1203 gccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  43074665 gccccataagttttgcaactgtagcagttttggccccccaatgccaatttttg 43074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 26089643 - 26089537
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||| |||||||||||| ||||||||||||  ||| |||||||||| | ||  ||  ||||||||||||||||| ||||||||  |||| |    
T  26089643 taacacgtggcacttcacttagggtgccacgtcagcgtagtctgagtcaaaattggcctt-tggaccaaaactgtcacagatgtaaaacttaaggggctg 26089545  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  26089544 ttttgtag 26089537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 31553382 - 31553489
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||  |||||||||||||||| | ||| |||||| || | |||||||||| | ||||||| |||||||| || ||||| |||| |||| |||||     
T  31553382 taacacgtagcacctcacttagggtgccgcgttagcgtagaccgagtcaaaattggccttgggggccaaaactgccatagatgtaaaatttagggggcga 31553481  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  31553482 ttttgtag 31553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1321 - 1383
Target Start/End: Original strand, 6207359 - 6207421
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||| ||||||| ||||| || |||| ||||||||||||| ||||||||||||||    
T  6207359 gtcaaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggttttgtag 6207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1276 - 1446
Target Start/End: Complemental strand, 8070799 - 8070630
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||   || ||||||||  | ||||| |||||||| ||||||| ||||| |||  |||| |    
T  8070799 taacacgtggcacctcacttggggtgccacgtcagcgtagaccaagttaaaattgatctagggggccaaaactgccacagatacaaaattta-tgggcag 8070701  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaag 1446  Q
    |||||||        ||||| | |||||| | ||||||||| |||||||| |||||||||||||||||||||    
T  8070700 ttttgtaatttttttcttag-gggccaaagttgcaactttggaaaagttagggggttaaaactgctattaag 8070630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Complemental strand, 19909223 - 19909173
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  19909223 gccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagcc 19909173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 54855477 - 54855304
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| |||||||||||| || | |||||||||| | ||||||  |||||||  || ||||||||||||||  |||| |    
T  54855477 taacaagtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggctttggggaccaaaactacca-agatgcaaaacttaaggggcag 54855379  T
Q  1376 ttttgtag-nnnnnnnctta-gagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
    |||||| |        |||| ||| | |||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  54855378 ttttgtcgttttttttcttatgag-gtcaaaatcgcagctttgagaaagttaggtggttaaaactgctattaagcc 54855304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1337 - 1447
Target Start/End: Original strand, 21957668 - 21957780
Alignment:
Q  1337 ggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnn--cttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaa 1433  Q
    |||||||||||||  |||| ||||||||||||  |||||||||||||         ||||||| |||||||||||||||||| |||||||| |||| |||    
T  21957668 ggggtcaaaactgctacagttgcaaaacttaggaggcggttttgtagtttttttttcttagag-gccaaaatcgcaactttggaaaagttagggggctaa 21957766  T
Q  1434 aactgctattaagc 1447  Q
    ||||||||||||||    
T  21957767 aactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 35393915 - 35393854
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| || |||||| ||||||||||||||||||| ||||||| |||||||||    
T  35393915 tacaaaaccgccccctaggttttgtaactgtagcagttttggccccccaaggccaatttttg 35393854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 53924814 - 53924874
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  53924814 tacaaaaccgtcccctaagttttgcaactgtagcagttttggcc-cccaagatcaatttttg 53924874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1324 - 1448
Target Start/End: Original strand, 2181313 - 2181438
Alignment:
Q  1324 aaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagt 1423  Q
    ||||||| | ||||||| ||||||||| |||| ||||||||||||||||| |||||||||       ||||  | ||||||||||||||||   ||||||    
T  2181313 aaaattgtccttgggggccaaaactgttacagttgcaaaacttagagggcagttttgtagttcttttcttaaggagccaaaatcgcaacttcataaaagt 2181412  T
Q  1424 taggg-gttaaaactgctattaagcc 1448  Q
    ||||| |  |||| ||||||||||||    
T  2181413 tagggagcaaaaagtgctattaagcc 2181438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1401 - 1444
Target Start/End: Complemental strand, 14060804 - 14060760
Alignment:
Q  1401 caaaatcgcaactttgaaaaagtta-ggggttaaaactgctatta 1444  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  14060804 caaaatcgcaactttgaaaaagttagggggttaaaactgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1280 - 1448
Target Start/End: Complemental strand, 21451627 - 21451459
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| ||||||||||||||||||||||||| ||| || | |||||||||  | ||| ||  |||||||| ||||  ||||||| ||||  | || ||||    
T  21451627 acgtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgccttgtggc-caaaactgccacaagtgcaaaatttaggagacgttttt 21451529  T
Q  1380 gtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
    ||||       || || | || |||||||||||||||| ||||||||| || ||||||||||||||||||    
T  21451528 gtagtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcc 21451459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1276 - 1328
Target Start/End: Original strand, 42526103 - 42526155
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaat 1328  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||    
T  42526103 taacacgtggcacctcacttagggtgtcacgtcagtgtagactgagtcaaaat 42526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 6614928 - 6614972
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  6614928 taagttttgcaactgtagcagttttggc--cccaaggtcaatttttg 6614972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1205 - 1255
Target Start/End: Complemental strand, 1571643 - 1571593
Alignment:
Q  1205 cccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||||||||| |||||||||||| || |||| |||||||||    
T  1571643 cccataagttttgcaactgtggcagttttggccccctaaggccaatttttg 1571593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 2654037 - 2654083
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||    
T  2654037 taagttttgcaactgtagcagttttggccccccaaagccaatttttg 2654083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 3658156 - 3658110
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||    
T  3658156 taagttttgcaactgtagcagttttggctccccaaggccaatttttg 3658110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1391 - 1448
Target Start/End: Complemental strand, 4796094 - 4796036
Alignment:
Q  1391 cttagagtgccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctattaagcc 1448  Q
    ||||||| ||||||||||||| |||||||||||||||||  ||||| ||||||||||||    
T  4796094 cttagagggccaaaatcgcaattttgaaaaagttaggggactaaaaatgctattaagcc 4796036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 21322790 - 21322836
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||    
T  21322790 taagttttgcaactttaacagttttggcctcccaaggccaatttttg 21322836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1357 - 1446
Target Start/End: Complemental strand, 1420627 - 1420537
Alignment:
Q  1357 tgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaag 1446  Q
    |||||||||||| ||||||||||||||        ||||   |||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  1420627 tgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 2837146 - 2837085
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||| ||| ||||||||||||||||  |||||| |||||||||    
T  2837146 tacaaaaccgccccctaagttttacaattgtagcagttttggccctccaaggccaatttttg 2837085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 6207244 - 6207305
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||  |||||||||||||| |||||||||||||||||||  ||||||  |||||||||    
T  6207244 tacaaaactgccccataagttttacaactgtagcagttttggctccccaagaccaatttttg 6207305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 8965588 - 8965648
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||||||||||||||||  ||||||||| | |||||||||||||||||    
T  8965588 tacaaaaccgccccttaagttttgcaactgtgccagttttggtc-cccaaggtcaatttttg 8965648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1243
Target Start/End: Complemental strand, 16292514 - 16292465
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaa 1243  Q
    |||||||||| ||| |||||||||||||||||| |||||||||| |||||    
T  16292514 tacaaaatcgtcccctaagttttgcaactgtagtagttttggccccccaa 16292465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1321 - 1381
Target Start/End: Complemental strand, 3658081 - 3658021
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgt 1381  Q
    ||||||||||||||| |||  |||||||||||||||||||||| ||||  || ||||||||    
T  3658081 gtcaaaattgacatttgggaccaaaactgtcacagatgcaaaatttaggaggtggttttgt 3658021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1205 - 1237
Target Start/End: Original strand, 4796114 - 4796146
Alignment:
Q  1205 cccataagttttgcaactgtagcagttttggcc 1237  Q
    |||||||||||||||||||||||||||||||||    
T  4796114 cccataagttttgcaactgtagcagttttggcc 4796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1197 - 1237
Target Start/End: Original strand, 18937311 - 18937351
Alignment:
Q  1197 aaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| ||| |||||||||||||||||||||||||||||    
T  18937311 aaaatcgtcccctaagttttgcaactgtagcagttttggcc 18937351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 5344442 - 5344407
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  5344442 acacgtggcacctcacttagggtgtcacgtcagcgt 5344407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1276 - 1354
Target Start/End: Original strand, 6614984 - 6615060
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcaca 1354  Q
    ||||| ||| ||||||||||||||||||| ||||||||| || | ||||||||||  ||  ||||||||||||| ||||    
T  6614984 taacatgtggcacctcacttagggtgtcatgtcagcgtagaccgagtcaaaattggtat--ggggtcaaaactgccaca 6615060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1324 - 1383
Target Start/End: Complemental strand, 8965646 - 8965587
Alignment:
Q  1324 aaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||| ||||||  |||||||| ||||| |||||||||||  ||||||||||||||    
T  8965646 aaaattgaccttggggaccaaaactggcacagttgcaaaacttaaggggcggttttgtag 8965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 11824442 - 11824399
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||    
T  11824442 tacaaattcgccccctaagttttgcaactgtagtagttttggcc 11824399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1196 - 1255
Target Start/End: Original strand, 20117969 - 20118028
Alignment:
Q  1196 caaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||| |||||||||||| ||||||| ||||||||| | |||||| | |||||||||    
T  20117969 caaaatcgtcccataagttttacaactgtcgcagttttgacatcccaaagccaatttttg 20118028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1257
Target Start/End: Original strand, 23759628 - 23759690
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgat 1257  Q
    ||||||| || ||| ||| |||||||||||||| |||||||||| ||||||| |||||||||||    
T  23759628 tacaaaaccgtcccctaaattttgcaactgtagtagttttggcc-cccaaggccaatttttgat 23759690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1391 - 1445
Target Start/End: Complemental strand, 29350940 - 29350885
Alignment:
Q  1391 cttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaa 1445  Q
    |||||||  ||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  29350940 cttagaggaccaaaatcgcaactttgaataagttaaggggttaaaactgttattaa 29350885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1382
Target Start/End: Complemental strand, 37289627 - 37289523
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaa-aattgacattgggggt-caaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||| |||||||||||||||| |||||||||||  |||| ||||| ||| |||  ||||||| ||||||||||| |||  |||||| ||| |||| |    
T  37289627 acacgtggcacctcacttagggtgccacgtcagcgttgactgagtcaacaatggac--tgggggtccaaaactgtcaaagaatcaaaacatagggggctg 37289530  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  37289529 ttttgta 37289523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 44921786 - 44921751
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  44921786 acacgtggcacctcacttagggtgtcacgtcagcgt 44921751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Complemental strand, 49185805 - 49185754
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||| |||||| |||||||||||||||| | |||||||||| |||||||    
T  49185805 tacaaaaccgccccttaagttttgcaactgttgtagttttggccccccaagg 49185754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1399 - 1446
Target Start/End: Original strand, 49185823 - 49185870
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaag 1446  Q
    ||||||||||||||||||  |||||| ||||| |||||||||||||||    
T  49185823 gccaaaatcgcaactttgtgaaagttgggggtgaaaactgctattaag 49185870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 51233723 - 51233680
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  51233723 tacaaaatcgccccttaattttggcaactgtagcagttttggcc 51233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 51537757 - 51537792
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  51537757 acacgtggcacctcacttagggtgtcacgtcagcgt 51537792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 51696708 - 51696673
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  51696708 acacgtgacacctcacttagggtgtcacgtcagcgt 51696673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 54607059 - 54607024
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  54607059 acacgtggcacctcacttagggtgtcacgtcagcgt 54607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 2181356 - 2181311
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  2181356 taagttttgcaactgtaacagttttggcc-cccaaggacaatttttg 2181311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1400 - 1446
Target Start/End: Original strand, 35615433 - 35615479
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaag 1446  Q
    ||||||||||||||| |  |||||||||||| |||||||||||||||    
T  35615433 ccaaaatcgcaacttcgtgaaagttaggggtgaaaactgctattaag 35615479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1276 - 1354
Target Start/End: Complemental strand, 49185743 - 49185665
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcaca 1354  Q
    ||||| ||| |||||| ||||||||| |||||||||||| ||   |||||||||| | ||||||| |||||||| ||||    
T  49185743 taacatgtggcacctcgcttagggtgccacgtcagcgtagaccaagtcaaaattggccttgggggccaaaactgccaca 49185665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 50769594 - 50769549
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||    
T  50769594 taagttttgcaactgtagcagttttggcc-cccaagaccaatttttg 50769549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1210 - 1255
Target Start/End: Complemental strand, 14016964 - 14016919
Alignment:
Q  1210 aagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||| || | ||||||| |||||||||    
T  14016964 aagttttgcaactgtagcagtttcggtcccccaaggccaatttttg 14016919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1285 - 1366
Target Start/End: Original strand, 20118052 - 20118133
Alignment:
Q  1285 tcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactt 1366  Q
    ||||||||||||||||| |||||| ||||| |  |  |||||||||   ||||||| |||||||| |||| |||||||||||    
T  20118052 tcacctcacttagggtgccacgtccgcgtagatcgaatcaaaattggtcttgggggccaaaactggcacatatgcaaaactt 20118133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1401 - 1445
Target Start/End: Original strand, 20737500 - 20737545
Alignment:
Q  1401 caaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaa 1445  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||    
T  20737500 caaaatcgcaactttgagaaagttaggatgttaaaactgctattaa 20737545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1286 - 1382
Target Start/End: Complemental strand, 26675217 - 26675121
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggt-caaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    |||||||||||||||| |||||||||||  |||| ||||| | ||  ||||||||| ||||||||||| |||  |||||| ||| |||| ||||||||    
T  26675217 cacctcacttagggtgccacgtcagcgttgactgagtcaacaatg-gattgggggtccaaaactgtcaaagaatcaaaacatagggggctgttttgta 26675121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1399 - 1447
Target Start/End: Complemental strand, 35615364 - 35615315
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagc 1447  Q
    |||||||||||||||||  |||||||| |||| |||||||||||||||||    
T  35615364 gccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1279 - 1383
Target Start/End: Complemental strand, 51233651 - 51233547
Alignment:
Q  1279 cacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgt-cacagatgcaaaacttagagggcggtt 1377  Q
    |||||| |||||||||||||||| |||||||||||| ||   ||| |||||| | ||||||| ||||||||| |||   ||||||||||||  ||||||     
T  51233651 cacgtggcacctcacttagggtgccacgtcagcgtagaccaagtccaaattggc-ttgggggccaaaactgtccacgagtgcaaaacttaggaggcggta 51233553  T
Q  1378 ttgtag 1383  Q
    ||||||    
T  51233552 ttgtag 51233547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 52462846 - 52462907
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||  ||||||||||||||||  |||||||| |||| ||| |||||||||||    
T  52462846 tacaaaaccgccctttaagttttgcaactgtttcagttttgacctctcaaagtcaatttttg 52462907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 1e-29; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 1e-29
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Original strand, 14943686 - 14943857
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||||||| ||| |||||||| || | |||||||||  | ||||||| ||||| || ||||| ||||||||||||||||||||    
T  14943686 aacacgtggcacctcacttagggtgccacatcagcgtagaccgagtcaaaattagccttgggggccaaaaatgccacaggtgcaaaacttagagggcggt 14943785  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagcc 1448  Q
    |||||||       |||||||  |||||||| |||||||| ||||||| ||||| ||||||||||||||||||    
T  14943786 tttgtagtttttttcttagag-accaaaatcacaactttggaaaagttaaggggctaaaactgctattaagcc 14943857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 1277 - 1445
Target Start/End: Original strand, 2609230 - 2609399
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| || ||||||||||||| ||| |||||||| || | |||||||||||  |||||||||||||||| |||| ||| ||||||||  ||||| |    
T  2609230 aacacgtggcaactcacttagggtgccacatcagcgtagaccgagtcaaaattgatcttgggggtcaaaactgccacatatgtaaaacttatggggcgat 2609329  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    |||||||       ||||| |  ||||||||||||||||||||||||||  | |||||||||||||||||    
T  2609330 tttgtagtttttttcttaggggaccaaaatcgcaactttgaaaaagttattgagttaaaactgctattaa 2609399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 37803296 - 37803190
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||| |||||||||| |||||||||||| || | ||||||||||||||| ||||||||||||| |||| |||||||||||||  |||||    
T  37803296 taacacgtgacaccttacttagggtgccacgtcagcgtagaccgagtcaaaattgacatt-ggggtcaaaactgccacaaatgcaaaacttaggaggcgg 37803198  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  37803197 ttttgtag 37803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 34679271 - 34679097
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta-gagggcg 1374  Q
    ||||||||| |||||||||||||||| |||||||||||| || |||||||||||    |||| || |||||||| ||||  ||||||||||| | |||||    
T  34679271 taacacgtggcacctcacttagggtgccacgtcagcgtagaccgggtcaaaatttgtcttggaggccaaaactgccacatgtgcaaaacttaggggggcg 34679172  T
Q  1375 gttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||        |||||   |||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  34679171 gttttgtaatttttttcttaggtggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 34679097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 39918608 - 39918434
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||| | || | |||||||||| | ||||||| |||||| | |||| ||||||||||||| |||||     
T  39918608 taacacgtggcacctcacttagggtgccacgtcagcgaagaccgagtcaaaattggccttgggggccaaaacagccacatatgcaaaacttagcgggcga 39918509  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||| ||        ||||| | ||||||||||||||||||| ||||||| |||| ||||||| ||||||||||    
T  39918508 ttttgcagttttttttcttagggggccaaaatcgcaactttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Original strand, 5470478 - 5470649
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| |||||||||||||||| ||||||||| || || | |||||||||| | ||||||| |||||||| |||||||| ||||||||  |||||||    
T  5470478 aacacgtggcacctcacttagggtgccacgtcagcatagaccgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggt 5470577  T
Q  1377 tttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||        |||| | |||||||||||||||||   ||||||| |||| |||||||||||| |||||    
T  5470578 tttgtagttttttt-ttagggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagcc 5470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 37431717 - 37431610
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| |||||||||||| || | |||||||||| | ||||||| |||||||| |||| ||||||||||||| |||||     
T  37431717 taacatgtggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcga 37431618  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  37431617 ttttgtag 37431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 43028967 - 43028794
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    |||||| || |||||||||||||||| |||||||||||| || | |||||||||| |  | | || |||||||| |||||||||||||||||| ||| ||    
T  43028967 taacacttggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccctagaggccaaaactgccacagatgcaaaacttag-gggggg 43028869  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||        ||||| | |||||||||||||||||| | |||||| |||| ||||||||||||||||||    
T  43028868 ttttgtagttttttttcttagggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagcc 43028794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Complemental strand, 14489387 - 14489214
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||| ||||||| ||| |||||||| || | ||||||||||   |||| ||||||||||| ||||| |||||||||||| ||||||    
T  14489387 taacacgtggcacctcacgtagggtgccacatcagcgtagaccgagtcaaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggggcgg 14489288  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttag-gggttaaaactgctattaagcc 1448  Q
    |||||||        ||||  | ||||||||| |||||||   |||||||| ||| ||||||||||||||||||    
T  14489287 ttttgtaatttttttcttaaggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcc 14489214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Complemental strand, 27489606 - 27489514
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||||||||||||||||| || ||||||||||||||| | |||||||||| | |||| || |||||||| ||||||||||||| ||||    
T  27489606 taacacgtgtcacctcacttaggatgccacgtcagcgtaaaccgagtcaaaattgcccttggaggccaaaactgccacagatgcaaaagttag 27489514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Original strand, 44617879 - 44617985
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| ||||||| |||||||| |||||||||||| || | ||||||||||   ||||||| |||||||| |||| ||||||||||||| ||||||    
T  44617879 taacaggtgacacctcatttagggtgccacgtcagcgtagaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcgg 44617978  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  44617979 ttttgta 44617985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1276 - 1368
Target Start/End: Original strand, 24472587 - 24472679
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    ||||||||| |||||||||||||||| ||||| || ||| || | |||||||||| |||||| || |||||||| ||||||||||||||||||    
T  24472587 taacacgtggcacctcacttagggtgccacgttagtgtagacggagtcaaaattggcattggcggccaaaactgccacagatgcaaaacttag 24472679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1290 - 1382
Target Start/End: Complemental strand, 25411701 - 25411609
Alignment:
Q  1290 tcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    ||||||| |||| ||||||||| || || | ||||||||||  ||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  25411701 tcacttatggtgccacgtcagcatagaccgagtcaaaattggtattgggggtgaaaactgccacagatgcaaaacttagggggcggttttgta 25411609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1289 - 1379
Target Start/End: Original strand, 5008441 - 5008531
Alignment:
Q  1289 ctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||||||||||| |||||||||||| || | |||||||||||| ||| ||| ||||| || |||| |||||||||||||||| |||||||    
T  5008441 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttagaggacggtttt 5008531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1277 - 1448
Target Start/End: Complemental strand, 6592899 - 6592724
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||||||| ||||||||||||||||  | ||||||||| |||| |||||||||  ||||| ||| |||||||| |||| ||||||||||||| |||| ||    
T  6592899 aacacgtggcacctcacttagggtgcaatgtcagcgtagactgagtcaaaattagcattgagggccaaaactgccacatatgcaaaacttag-gggcagt 6592801  T
Q  1377 tttgt----agnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||    |        ||||| | | |||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  6592800 tttgtaaaaaaaaatcttcttagggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 6592724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1278 - 1448
Target Start/End: Complemental strand, 25333670 - 25333499
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtt 1377  Q
    ||||||| ||||| |||||||||| |||||||||||| ||   |||||||||| | |||| |  |||||||| ||||| |||||||||||| ||| ||||    
T  25333670 acacgtggcaccttacttagggtgccacgtcagcgtagaccaagtcaaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggtt 25333571  T
Q  1378 ttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtt-aggggttaaaactgctattaagcc 1448  Q
    || |||       ||||  |  ||||||||||||||||| ||||||| ||||||||||| || |||||||||    
T  25333570 ttatagtttttttcttaagggaccaaaatcgcaactttggaaaagttaaggggttaaaattgttattaagcc 25333499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1194 - 1448
Target Start/End: Complemental strand, 31827779 - 31827525
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttgatnnnnnnnnnnnnnnnnnntaacacgtgtcacctcac 1293  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |                   |||| ||| ||||||||    
T  31827779 tacaaaatcaccccctaagttttgcaactgtagcagttttggcc-cccaaggccaatttttggtaaaaaaaaaaaaaaaaa--aacatgtggcacctcac 31827683  T
Q  1294 ttagggtgtcacgtcagcgtaaactgggtcaaaattgacatt-gggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag-nnnnnnnc 1391  Q
    |||||||| |||||||||||| || |  ||||||||||  || ||||| |||||||| |||||||||||| ||||| ||| | ||||||||        |    
T  31827682 ttagggtgccacgtcagcgtagaccgaatcaaaattgattttggggggccaaaactggcacagatgcaaagcttagggggtgattttgtagtcttttttc 31827583  T
Q  1392 ttagagtgccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaagcc 1448  Q
    |||| | | ||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  31827582 ttaggggggcaaaatcacaactttggaaaagttagggagttaaaactgctattaagcc 31827525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Complemental strand, 34761020 - 34760914
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    |||| ||| |||||||||||||||| ||||||||| || ||   ||||||||||   ||||||| |||||||| |||| ||||||||||||| |||||||    
T  34761020 aacatgtgacacctcacttagggtgccacgtcagcatagaccacgtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggt 34760921  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  34760920 tttgtag 34760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 8857293 - 8857233
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  8857293 tacaaaattgccccataagttttgcaactatagcagttttggcct-ccaaggtcaatttttg 8857233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 7e-16
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 4576683 - 4576854
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||| ||||||| || | |||||||||| || |||||| ||||||||||||  | ||||||||||  || |      
T  4576683 taacacgtggcacctcacttagggtgccacgccagcgtagaccgagtcaaaattggcagtgggggccaaaactgtcacgaacgcaaaacttaagggacaa 4576782  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggt-taaaactgctattaagcc 1448  Q
    ||||||||        |||  | ||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  4576783 ttttgtagtttttta-ttaaggggccaaaatcgcaactttg-gaaagttaggggtctaaaactgctattaagcc 4576854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 4925613 - 4925506
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||| |||||||||| |||||||||||| || |   ||||||||   || ||||||||||||| |||| ||||||||||||| || |||    
T  4925613 taacacgtggcaccttacttagggtgccacgtcagcgtagacagaaccaaaattggtcttaggggtcaaaactgccacatatgcaaaacttaggggacgg 4925514  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  4925513 ttttgtag 4925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 0.000000000000003
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Original strand, 8553684 - 8553774
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||||||| |||||||||||||||||||||||||| || || | ||| |||||||| ||||| | |||||||| |||| ||||||||||||    
T  8553684 taacacgtggcacctcacttagggtgtcacgtcagcatagaccgagtc-aaattgactttgggagacaaaactgccacaaatgcaaaactta 8553774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1276 - 1382
Target Start/End: Complemental strand, 8857220 - 8857114
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| ||| |||| ||| |||||||  ||   |||||||||| ||||||||| |||||||| |||| |||||||||||||  |||||    
T  8857220 taacacgtggcacctcatttaaggtgccacatcagcgttgaccaagtcaaaattggcattgggggccaaaactgccacaaatgcaaaacttaggaggcgg 8857121  T
Q  1376 ttttgta 1382  Q
    |||||||    
T  8857120 ttttgta 8857114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 4576611 - 4576671
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  4576611 tacaaaatcgtcccataagttttgcaactgtagcagttttggcc-cccaagaccaatttttg 4576671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 39918688 - 39918627
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||||||||||||||| |||||||| ||||||| |||||||||    
T  39918688 tacaaaaccgccccctaagttttgcaactgtagcaattttggccccccaaggccaatttttg 39918627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1276 - 1448
Target Start/End: Original strand, 41196370 - 41196539
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||| ||| |||||||||||||||| |||||||||||| ||   ||| ||||||||||||||||  ||||||  |||| ||||||||||||  || | |    
T  41196370 taacatgtggcacctcacttagggtgccacgtcagcgtagaccaagtctaaattgacattgggggcaaaaacttccacatatgcaaaacttaagggacag 41196469  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    |||||||        ||  ||    ||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  41196470 ttttgtaatttttttctggga---tcaaaatcacaactttgaaaaagttaagggttaaaactgctataaagcc 41196539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1291 - 1383
Target Start/End: Complemental strand, 32969716 - 32969624
Alignment:
Q  1291 cacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||| |||||||||||||| || | |||||||||| | ||||| | |||||||| |||| ||| ||||||||| ||||| ||||||||    
T  32969716 cacttagggcgtcacgtcagcgtagaccgagtcaaaattggccttgggagccaaaactgccacaaatgaaaaacttagggggcgattttgtag 32969624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Original strand, 18969234 - 18969341
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| |||| ||||||||||||||||  |   |||||||||| | |||||||||||||| | |||| || ||||| ||||||| ||     
T  18969234 taacacgtgacacctcatttagagtgtcacgtcagcgtaggcctagtcaaaattggccttgggggtcaaaacagccacaaatacaaaatttagaggacga 18969333  T
Q  1376 ttttgtag 1383  Q
    ||||||||    
T  18969334 ttttgtag 18969341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Original strand, 24306159 - 24306250
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||| ||| |||||||||||||||||||| |||||||| |    |||||||||||| ||||||| || ||||||||||  |||||||||||    
T  24306159 taacatgtgacacctcacttagggtgtcacatcagcgtagatcaagtcaaaattgaccttgggggccagaactgtcacatgtgcaaaactta 24306250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 1194 - 1244
Target Start/End: Complemental strand, 6510246 - 6510196
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaag 1244  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  6510246 tacaaaaccgccccctaagttttgcaactgtagcagttttggccccccaag 6510196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1334 - 1383
Target Start/End: Complemental strand, 25501 - 25452
Alignment:
Q  1334 ttgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||    
T  25501 ttgggggtcaaaactgccacaggtgcaaaacttagggggcggttttgtag 25452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 19206208 - 19206269
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| | |||| |||||||| |||||||||||||||||||| ||||||| |||||||||    
T  19206208 tacaaaaccaccccctaagttttacaactgtagcagttttggccccccaaggccaatttttg 19206269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1243
Target Start/End: Complemental strand, 34679339 - 34679290
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaa 1243  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| |||||    
T  34679339 tacaaaaccgccccctaagttttgcaactgtagcagttttggccccccaa 34679290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1290 - 1383
Target Start/End: Complemental strand, 35718805 - 35718712
Alignment:
Q  1290 tcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||||| ||| ||| |||| |||| |||||||||| | |||| || |||||||| |||||||||||||  ||| || |||||||||||    
T  35718805 tcacttagggtgccacatcaccgtagactgagtcaaaattggccttggaggccaaaactgccacagatgcaaaatgtaggggacggttttgtag 35718712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 35718902 - 35718842
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  35718902 tacaaaaccgtcccctaagttttgcaactgtagcagttttggcc-cctaaggtcaatttttg 35718842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Original strand, 5362315 - 5362407
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgac-attgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||| ||| ||||||||||||| ||||||||||||||| |||| |||||||||| |  |||| || |||||||| ||||| || ||||||||    
T  5362315 taacatgtggcacctcacttaggatgtcacgtcagcgtagactgagtcaaaattggcttttggaggccaaaactgccacagttgtaaaactta 5362407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 4925692 - 4925650
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  4925692 tacaaaatcgcccc-taagttttgcaactgtagcagttttggcc 4925650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1197 - 1255
Target Start/End: Original strand, 19895685 - 19895741
Alignment:
Q  1197 aaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||| ||||||||||||||||| ||||||||||||  |||||||| |||||||||    
T  19895685 aaaatcgcaccataagttttgcaactatagcagttttgg--tcccaaggccaatttttg 19895741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1276 - 1367
Target Start/End: Original strand, 19895754 - 19895845
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    |||||| || ||||||||||||||||  |||||||| ||||| |  ||||||||| |||||||||  ||||||| |||| ||| ||||||||    
T  19895754 taacacatggcacctcacttagggtgctacgtcagcataaaccgaatcaaaattggcattgggggctaaaactgccacatatgtaaaactta 19895845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1321 - 1383
Target Start/End: Original strand, 16043207 - 16043269
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    |||||||||| | ||||||| |||||||| |||||||||||||| ||| |||||||| |||||    
T  16043207 gtcaaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggttctgtag 16043269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1402 - 1448
Target Start/End: Complemental strand, 24498152 - 24498106
Alignment:
Q  1402 aaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  24498152 aaaatcacaactttgaaaaaattaggggctaaaactgctattaagcc 24498106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1194 - 1244
Target Start/End: Complemental strand, 37431784 - 37431734
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaag 1244  Q
    ||||||| |||||| |||||||||||||||||||| |||||||| ||||||    
T  37431784 tacaaaaccgccccttaagttttgcaactgtagcatttttggccccccaag 37431734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 5470395 - 5470455
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||  ||||| |||||||||||| |||||||||||||||| ||||||| |||||||||    
T  5470395 tacaaaactgccccctaagttttgcaattgtagcagttttggcc-cccaaggccaatttttg 5470455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1336 - 1414
Target Start/End: Original strand, 6510200 - 6510278
Alignment:
Q  1336 gggggtcaaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactt 1414  Q
    ||||| ||||||||  |||| |||||||||||| ||||||||||||||       ||||| ||||||||||||||||||    
T  6510200 gggggccaaaactgctacagttgcaaaacttagggggcggttttgtagcttttttcttagggtgccaaaatcgcaactt 6510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 6592980 - 6592920
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||  ||||| ||||||||||||||||||||||||||||| ||||| | |||||||||    
T  6592980 tacaaaactgccccctaagttttgcaactgtagcagttttggcc-cccaaagccaatttttg 6592920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1321 - 1382
Target Start/End: Original strand, 16238407 - 16238468
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggttttgta 1382  Q
    |||||||||||||||||||| ||||||||||| |||| ||| || ||| |||| ||||||||    
T  16238407 gtcaaaattgacattgggggccaaaactgtcaaagatccaatacatagggggctgttttgta 16238468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 18709312 - 18709373
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||   ||||| |||||||||    
T  18709312 tacaaaatcaccccctaagttttgcaactatagcagttttggcccaacaaggccaatttttg 18709373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1400 - 1448
Target Start/End: Original strand, 19399440 - 19399489
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  19399440 ccaaaatcacaactttgaaaaagttagggggctaaaactgctattaagcc 19399489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Complemental strand, 21361930 - 21361881
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||||| |||||||||||  |||| ||||||||||||    
T  21361930 gccaaaatcgcaactttgataaagttaggggcaaaaattgctattaagcc 21361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1286 - 1363
Target Start/End: Complemental strand, 25092459 - 25092382
Alignment:
Q  1286 cacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaa 1363  Q
    ||||||||||||| || ||||||||| |  || | |||||||||||| || |||| |||||| |||||||||||||||    
T  25092459 cacctcacttaggatgccacgtcagcattgaccgagtcaaaattgactttcggggacaaaacggtcacagatgcaaaa 25092382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1400 - 1448
Target Start/End: Original strand, 36715559 - 36715608
Alignment:
Q  1400 ccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaagcc 1448  Q
    |||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  36715559 ccaaaatcgcaactttaaaaaagttagggagctaaaactgctattaagcc 36715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 43029040 - 43028979
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||| ||| |||||||||||||||| | ||||| |||||||||    
T  43029040 tacaaaaccgccccctaagttttacaattgtagcagttttggccccacaaggccaatttttg 43028979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 14489458 - 14489415
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||    
T  14489458 tacaaaatcaccccctaagttttgcaactgtggcagttttggcc 14489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1280 - 1367
Target Start/End: Original strand, 18709399 - 18709486
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaactta 1367  Q
    ||||| ||||||||||| |||||||||||||| || || | || |||||||||||||||   ||||| ||  |||| |||||||||||    
T  18709399 acgtggcacctcacttaaggtgtcacgtcagcatagaccgagttaaaattgacattgggaaccaaaattgctacagttgcaaaactta 18709486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1237
Target Start/End: Complemental strand, 32969771 - 32969728
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcc 1237  Q
    ||||||| |||||| ||||||||||||| |||||||||||||||    
T  32969771 tacaaaaccgccccctaagttttgcaacagtagcagttttggcc 32969728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Original strand, 40711478 - 40711513
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  40711478 acacgtggcacctcacttagggtgtcacgtcagcgt 40711513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Complemental strand, 16043139 - 16043089
Alignment:
Q  1399 gccaaaatcgcaactttg-aaaaagttaggggttaaaactgctattaagcc 1448  Q
    ||||||| |||||||||| ||||||||||||| |||||||| |||||||||    
T  16043139 gccaaaaccgcaactttggaaaaagttaggggataaaactgttattaagcc 16043089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Original strand, 25375137 - 25375187
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    |||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  25375137 gccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcc 25375187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Complemental strand, 27489667 - 27489621
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||||||||||||||| || ||||||| ||||| |||    
T  27489667 taagttttgcaactgtagcagttttgaccccccaaggccaattcttg 27489621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1205 - 1255
Target Start/End: Complemental strand, 37803366 - 37803317
Alignment:
Q  1205 cccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||||||||  | ||||||| |||||||||    
T  37803366 cccataagttttgcaactgtagcagttttgatc-cccaaggccaatttttg 37803317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1209 - 1255
Target Start/End: Original strand, 44617814 - 44617859
Alignment:
Q  1209 taagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||    
T  44617814 taagttttgcaactgtagcagttttagtc-cccaaggtcaatttttg 44617859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1276 - 1313
Target Start/End: Original strand, 2936928 - 2936965
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  2936928 taacacgtggcacctcacttagggtgccacgtcagcgt 2936965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1276 - 1329
Target Start/End: Original strand, 19399317 - 19399370
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaatt 1329  Q
    |||||||||  ||||||||||||||| |||||||||||| || | |||||||||    
T  19399317 taacacgtggaacctcacttagggtgccacgtcagcgtagaccgagtcaaaatt 19399370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1342 - 1448
Target Start/End: Complemental strand, 24306122 - 24306016
Alignment:
Q  1342 caaaactgtcacagatgcaaaacttagagggcggttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggggttaaaactgcta 1441  Q
    ||||||||| |||| ||||||||||||| | |||||||||||       |||||||  | ||||||||||||| | ||||||||||    ||||||| ||    
T  24306122 caaaactgttacagttgcaaaacttagaagacggttttgtagtttttttcttagaggactaaaatcgcaacttcgtaaaagttaggaaaaaaaactgtta 24306023  T
Q  1442 ttaagcc 1448  Q
    |||||||    
T  24306022 ttaagcc 24306016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1277 - 1330
Target Start/End: Original strand, 36195720 - 36195773
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattg 1330  Q
    ||||| || |||||||||||||||| |||||||||||| || | ||||||||||    
T  36195720 aacacatggcacctcacttagggtgccacgtcagcgtagaccgagtcaaaattg 36195773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 56; Significance: 2e-22; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1276 - 1383
Target Start/End: Complemental strand, 77035 - 76929
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||| |||||||||||| || | |||||||||| | ||||||| |||||||| |||| ||||||||||||| ||||||    
T  77035 taacacgtgacacctcacttagggtgccacgtcagcgtagaccgagtcaaaattggccttggggg-caaaactgccacaaatgcaaaacttagggggcgg 76937  T
Q  1376 ttttgtag 1383  Q
     |||||||    
T  76936 ctttgtag 76929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 77107 - 77046
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||  ||| || |||||||||    
T  77107 tacaaaatcgtcccctaagttttacaactgtagcagttttggccctccacggccaatttttg 77046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Original strand, 77125 - 77175
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
    ||||||| ||||||||| ||||||||||| |||||||||| ||||||||||    
T  77125 gccaaaaccgcaactttaaaaaagttaggcggttaaaactactattaagcc 77175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 53; Significance: 1e-20; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1280 - 1447
Target Start/End: Complemental strand, 20083 - 19915
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| |||||||||||||||| ||||| |||||| |  | |||||||||| | ||||||| |||||||| |||||||||||||||||| || || ||||    
T  20083 acgtgacacctcacttagggtgccacgttagcgtagatcgagtcaaaattggctttgggggccaaaactgccacagatgcaaaacttagtggacgatttt 19984  T
Q  1380 gtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagc 1447  Q
    ||||        ||||| | ||||||||| ||||||| ||||| ||| ||||||||||||||||||||||    
T  19983 gtagttttttttcttag-gggccaaaatcacaactttaaaaaatttagggggttaaaactgctattaagc 19915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 7e-19; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 7e-19
Query Start/End: Original strand, 1276 - 1445
Target Start/End: Complemental strand, 9585 - 9415
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| ||||||| ||| | |||||||||||| || || | |||||||||| | |||||||  ||||||| |||| ||||||||||||| || |||    
T  9585 taacacgtggcacctcatttaagatgtcacgtcagcctagaccgagtcaaaattggccttgggggctaaaactgccacatatgcaaaacttaggggacgg 9486  T
Q  1376 ttttgtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaa 1445  Q
    ||||||||       ||||||| || |||||| ||||||||  ||| ||| |||| |||||||||||||||    
T  9485 ttttgtagtttttttcttagagggcaaaaatcacaactttgggaaaattagggggctaaaactgctattaa 9415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 9667 - 9606
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| ||||||||||||||||||| ||| ||| | || |||| |||||||||    
T  9667 tacaaaaccgccccttaagttttgcaactgtagcggttctggtccccgaaggccaatttttg 9606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 47; Significance: 4e-17; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1280 - 1445
Target Start/End: Original strand, 2905 - 3068
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| || |||| ||||||||||||||||  ||| |||| |||||||||| | ||||||  ||||||||||||| |||||||||||| ||||| |||||    
T  2905 acgtggcatctcatttagggtgtcacgtcaaagtagactgagtcaaaattggctttggggc-caaaactgtcacatatgcaaaacttaaagggcagtttt 3003  T
Q  1380 gtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttaggg-gttaaaactgctattaa 1445  Q
     |||       ||||| ||  ||||||||||||||||| ||||||||||   |||||||||||||||    
T  3004 ttagtttttttcttagggt--caaaatcgcaactttgagaaagttagggaactaaaactgctattaa 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 47; Significance: 4e-17; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1289 - 1379
Target Start/End: Complemental strand, 3236 - 3146
Alignment:
Q  1289 ctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||||||||||| |||||||||||| || | |||||||||||| ||| ||| ||||| || |||| |||||||||||||||| |||||||    
T  3236 ctcacttagggtgccacgtcagcgtagaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttagaggacggtttt 3146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 2e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1276 - 1429
Target Start/End: Complemental strand, 145527 - 145373
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| |||||||||||||||  || |||||| || || | |||||||||| | ||||||| |||||||| ||||||||||||| |||  ||||||    
T  145527 taacacgtggcacctcacttagggttccatgtcagcctagaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaatttaaggggcgg 145428  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagggg 1429  Q
     |||||||        ||||| | | ||||||||||||||||| |||||||||||    
T  145427 ctttgtagttttttttcttaggggggcaaaatcgcaactttgagaaagttagggg 145373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 9618 - 9678
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||| ||||||||||    
T  9618 tacaaaatcgccccttaagttttgcaactgtagtagttttggcc-cccaagatcaatttttg 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 38; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 4260 - 4199
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||||| |||||||||||||||||||||||||| ||  | ||||||||||||||    
T  4260 tacaaaaccgccccctaagttttgcaactgtagcagttttgaccctctaaggtcaatttttg 4199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1338 - 1383
Target Start/End: Original strand, 4216 - 4261
Alignment:
Q  1338 gggtcaaaactgtcacagatgcaaaacttagagggcggttttgtag 1383  Q
    ||||||||||||  |||| |||||||||||| ||||||||||||||    
T  4216 gggtcaaaactgctacagttgcaaaacttagggggcggttttgtag 4261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 37; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1276 - 1348
Target Start/End: Complemental strand, 9511 - 9439
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaact 1348  Q
    ||||||||| ||||||||||||| || |||||||||||| || | |||||||||||  ||||||| |||||||    
T  9511 taacacgtgacacctcacttaggatgccacgtcagcgtagaccgagtcaaaattgatcttgggggccaaaact 9439  T

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Target: scaffold0417; HSP #2
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1198 - 1242
Target Start/End: Complemental strand, 9578 - 9534
Alignment:
Q  1198 aaatcgccccataagttttgcaactgtagcagttttggcctccca 1242  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||    
T  9578 aaatcgccccctaagttttgcaactgtagcagttttagcccccca 9534  T

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Target: scaffold0372 (Bit Score: 37; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1280 - 1448
Target Start/End: Complemental strand, 292 - 124
Alignment:
Q  1280 acgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggtttt 1379  Q
    ||||| ||||||||||||||||||||||||| ||| || | |||||||||  | ||| ||  |||||||| ||||  ||||||| ||||  | || ||||    
T  292 acgtggcacctcacttagggtgtcacgtcagtgtagaccgagtcaaaattcgccttgtggc-caaaactgccacaagtgcaaaatttaggagacgttttt 194  T
Q  1380 gtagnnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagcc 1448  Q
    ||||       || || | || |||||||||||||||| ||||||||| || ||||||||||||||||||    
T  193 gtagtttttatctcagggagcaaaaatcgcaactttgagaaagttaggaggctaaaactgctattaagcc 124  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1399 - 1445
Target Start/End: Original strand, 19605 - 19652
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagttagggg-ttaaaactgctattaa 1445  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  19605 gccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

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Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1277 - 1383
Target Start/End: Original strand, 19170 - 19276
Alignment:
Q  1277 aacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcggt 1376  Q
    ||||||||  ||||||| |||||||  | ||||||||| || | | |||||||| | ||||||| |||||||  ||||  |||||||||||| |||||||    
T  19170 aacacgtggtacctcacgtagggtgctatgtcagcgtagaccgagccaaaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggt 19269  T
Q  1377 tttgtag 1383  Q
    |||||||    
T  19270 tttgtag 19276  T

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Target: scaffold0025; HSP #3
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1194 - 1245
Target Start/End: Original strand, 19107 - 19158
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaagg 1245  Q
    ||||||| || ||| ||||||||||||| ||||||| |||||||||||||||    
T  19107 tacaaaaccgtcccctaagttttgcaaccgtagcagatttggcctcccaagg 19158  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 1321 - 1368
Target Start/End: Original strand, 203361 - 203408
Alignment:
Q  1321 gtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttag 1368  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  203361 gtcaaaattgactttgggggccaaaactgtcacaaatgcaaaacttag 203408  T

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Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Original strand, 203256 - 203317
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| |||| | ||| |||||||||||||| ||||||||||  ||||||| ||||||||    
T  203256 tacaaaaccgcctcctaaattttgcaactgtagaagttttggccctccaaggtaaatttttg 203317  T

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Target: scaffold0166 (Bit Score: 33; Significance: 0.00000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 1276 - 1447
Target Start/End: Complemental strand, 21830 - 21659
Alignment:
Q  1276 taacacgtgtcacctcacttagggtgtcacgtcagcgtaaactgggtcaaaattgacattgggggtcaaaactgtcacagatgcaaaacttagagggcgg 1375  Q
    ||||||||| || ||||||| ||||| |||||||||||| || | ||||||||||   |||||   |||||||| || ||| |||||||||||| | |||    
T  21830 taacacgtgacaactcacttggggtgccacgtcagcgtagaccgagtcaaaattggttttgggaaccaaaactgccatagaggcaaaacttaga-gacgg 21732  T
Q  1376 ttttgtag-nnnnnnncttagagtgccaaaatcgcaactttgaaaaagttagg-ggttaaaactgctattaagc 1447  Q
    ||||||||        ||||| | | ||||||||||||||| ||||||||||| || ||||||| |||||||||    
T  21731 ttttgtagttttttttcttagtg-gacaaaatcgcaactttaaaaaagttaggaggctaaaactactattaagc 21659  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1278 - 1313
Target Start/End: Complemental strand, 79162 - 79127
Alignment:
Q  1278 acacgtgtcacctcacttagggtgtcacgtcagcgt 1313  Q
    ||||||| ||||||||||||||||||||||||||||    
T  79162 acacgtggcacctcacttagggtgtcacgtcagcgt 79127  T

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Target: scaffold0515 (Bit Score: 31; Significance: 0.0000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Complemental strand, 3689 - 3639
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||||  ||||||| |||| ||||||||||||||||||    
T  3689 gccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcc 3639  T

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Target: scaffold0306 (Bit Score: 31; Significance: 0.0000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1399 - 1448
Target Start/End: Complemental strand, 3689 - 3639
Alignment:
Q  1399 gccaaaatcgcaactttgaaaaagtta-ggggttaaaactgctattaagcc 1448  Q
    ||||||||||||||||||  ||||||| |||| ||||||||||||||||||    
T  3689 gccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcc 3639  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1194 - 1255
Target Start/End: Complemental strand, 94048 - 93987
Alignment:
Q  1194 tacaaaatcgccccataagttttgcaactgtagcagttttggcctcccaaggtcaatttttg 1255  Q
    ||||||| || ||||||||||||| |||||||||||||| ||||  |||| | |||||||||    
T  94048 tacaaaaccgtcccataagttttgtaactgtagcagtttaggccctccaatgccaatttttg 93987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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