View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18766_low_11 (Length: 542)

Name: NF18766_low_11
Description: NF18766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18766_low_11
NF18766_low_11
[»] chr1 (39 HSPs)
chr1 (20-403)||(13884598-13884978)
chr1 (488-542)||(13885063-13885117)
chr1 (62-122)||(8417227-8417287)
chr1 (62-122)||(18353088-18353148)
chr1 (62-122)||(19709037-19709097)
chr1 (62-122)||(24038241-24038301)
chr1 (62-122)||(33785194-33785254)
chr1 (62-122)||(52222725-52222785)
chr1 (62-116)||(5500024-5500078)
chr1 (62-116)||(19507063-19507117)
chr1 (62-104)||(27090885-27090927)
chr1 (62-116)||(39919610-39919664)
chr1 (62-123)||(34083968-34084029)
chr1 (62-123)||(39860526-39860587)
chr1 (62-122)||(6889573-6889633)
chr1 (62-122)||(6891419-6891479)
chr1 (62-106)||(17386374-17386418)
chr1 (62-122)||(17805813-17805873)
chr1 (62-116)||(10805023-10805077)
chr1 (62-116)||(13077300-13077354)
chr1 (62-116)||(15321962-15322016)
chr1 (62-116)||(23555751-23555805)
chr1 (62-104)||(31493506-31493548)
chr1 (62-112)||(34050073-34050123)
chr1 (62-104)||(42384218-42384260)
chr1 (62-116)||(44912603-44912657)
chr1 (62-116)||(6305030-6305084)
chr1 (62-116)||(15849819-15849873)
chr1 (62-116)||(16452391-16452445)
chr1 (62-116)||(16461543-16461597)
chr1 (62-116)||(18342564-18342618)
chr1 (62-104)||(29523131-29523173)
chr1 (62-116)||(44779541-44779595)
chr1 (62-104)||(44969045-44969087)
chr1 (62-99)||(7109647-7109684)
chr1 (62-99)||(13253267-13253304)
chr1 (62-123)||(32239352-32239413)
chr1 (62-99)||(46846781-46846818)
chr1 (69-117)||(45372816-45372864)
[»] chr5 (22 HSPs)
chr5 (62-126)||(11877458-11877522)
chr5 (62-122)||(18158378-18158438)
chr5 (62-116)||(15397563-15397617)
chr5 (62-123)||(9163427-9163488)
chr5 (63-116)||(38254699-38254752)
chr5 (62-123)||(42062370-42062431)
chr5 (62-122)||(40083983-40084043)
chr5 (62-116)||(10017769-10017823)
chr5 (62-116)||(14949588-14949642)
chr5 (62-122)||(491253-491313)
chr5 (62-122)||(31271497-31271557)
chr5 (62-105)||(12880476-12880519)
chr5 (62-104)||(17870105-17870147)
chr5 (62-114)||(18295192-18295244)
chr5 (62-122)||(27332561-27332621)
chr5 (62-104)||(32298676-32298718)
chr5 (62-123)||(4049505-4049566)
chr5 (62-123)||(10931617-10931678)
chr5 (62-99)||(27054561-27054598)
chr5 (62-114)||(370164-370216)
chr5 (62-122)||(6644221-6644281)
chr5 (62-122)||(7078990-7079050)
[»] chr3 (34 HSPs)
chr3 (62-123)||(33069489-33069550)
chr3 (62-123)||(1782750-1782811)
chr3 (62-123)||(39391049-39391110)
chr3 (62-123)||(40000845-40000906)
chr3 (62-122)||(13596161-13596221)
chr3 (62-122)||(19420962-19421022)
chr3 (62-122)||(20647861-20647921)
chr3 (62-122)||(28793648-28793708)
chr3 (62-122)||(29076864-29076924)
chr3 (62-116)||(4357088-4357142)
chr3 (62-116)||(26994825-26994879)
chr3 (66-124)||(34705379-34705437)
chr3 (62-123)||(9338326-9338387)
chr3 (62-122)||(4481649-4481709)
chr3 (62-122)||(24541042-24541102)
chr3 (62-122)||(33249412-33249472)
chr3 (62-122)||(47597150-47597210)
chr3 (62-104)||(2222148-2222190)
chr3 (62-116)||(7046801-7046855)
chr3 (62-104)||(24133774-24133816)
chr3 (62-104)||(41129787-41129829)
chr3 (62-116)||(41636289-41636343)
chr3 (62-104)||(42294127-42294169)
chr3 (62-116)||(51302367-51302421)
chr3 (62-122)||(40489111-40489171)
chr3 (62-105)||(34636354-34636397)
chr3 (62-116)||(25593737-25593791)
chr3 (62-104)||(34422732-34422774)
chr3 (62-116)||(39889327-39889381)
chr3 (62-104)||(46136428-46136470)
chr3 (62-104)||(52174871-52174913)
chr3 (62-116)||(54447587-54447641)
chr3 (62-104)||(54650459-54650501)
chr3 (62-123)||(43010300-43010361)
[»] chr2 (23 HSPs)
chr2 (62-114)||(6420021-6420073)
chr2 (62-123)||(34726389-34726450)
chr2 (62-123)||(40737799-40737860)
chr2 (62-122)||(13029170-13029230)
chr2 (62-122)||(21198200-21198260)
chr2 (62-129)||(36985444-36985511)
chr2 (62-116)||(2182783-2182837)
chr2 (62-116)||(2995107-2995161)
chr2 (62-116)||(6283338-6283392)
chr2 (62-116)||(6431522-6431576)
chr2 (62-116)||(29044111-29044165)
chr2 (66-122)||(12033892-12033948)
chr2 (62-122)||(26260330-26260390)
chr2 (62-122)||(38448096-38448156)
chr2 (62-105)||(29768307-29768350)
chr2 (62-116)||(35959335-35959389)
chr2 (62-122)||(32084178-32084238)
chr2 (66-117)||(17852818-17852869)
chr2 (62-104)||(5936835-5936877)
chr2 (62-104)||(7592607-7592649)
chr2 (62-116)||(44092872-44092926)
chr2 (62-115)||(31452946-31452999)
chr2 (62-95)||(43616332-43616365)
[»] chr8 (24 HSPs)
chr8 (62-117)||(23950293-23950348)
chr8 (62-116)||(24580447-24580501)
chr8 (62-122)||(26241267-26241327)
chr8 (62-122)||(32551637-32551697)
chr8 (62-116)||(12637991-12638045)
chr8 (62-116)||(14921372-14921426)
chr8 (62-116)||(16365045-16365099)
chr8 (62-116)||(38600891-38600945)
chr8 (62-116)||(44755550-44755604)
chr8 (62-123)||(36684671-36684732)
chr8 (62-122)||(7323255-7323315)
chr8 (67-122)||(16383970-16384025)
chr8 (62-116)||(7383235-7383289)
chr8 (62-103)||(33303845-33303886)
chr8 (62-122)||(11989029-11989089)
chr8 (62-122)||(26106378-26106438)
chr8 (62-122)||(36054707-36054767)
chr8 (62-122)||(39506693-39506753)
chr8 (62-104)||(8000034-8000076)
chr8 (62-104)||(12615138-12615180)
chr8 (62-116)||(32983265-32983319)
chr8 (62-116)||(35056185-35056239)
chr8 (62-116)||(44710083-44710137)
chr8 (62-103)||(10921087-10921128)
[»] chr7 (25 HSPs)
chr7 (62-116)||(44848022-44848076)
chr7 (62-123)||(14776247-14776308)
chr7 (62-123)||(41892122-41892183)
chr7 (62-122)||(2732290-2732350)
chr7 (62-122)||(3356960-3357020)
chr7 (62-122)||(11410521-11410581)
chr7 (62-122)||(15943183-15943243)
chr7 (62-105)||(10227875-10227918)
chr7 (62-116)||(12419217-12419271)
chr7 (62-116)||(15757709-15757763)
chr7 (62-123)||(1411586-1411647)
chr7 (62-123)||(2196043-2196104)
chr7 (62-117)||(43596239-43596294)
chr7 (66-116)||(2941197-2941247)
chr7 (66-116)||(13391060-13391110)
chr7 (62-104)||(18533428-18533470)
chr7 (62-116)||(21806506-21806560)
chr7 (62-116)||(23671210-23671264)
chr7 (62-116)||(31377371-31377425)
chr7 (62-116)||(41902902-41902956)
chr7 (62-123)||(34521308-34521369)
chr7 (62-122)||(41399775-41399834)
chr7 (67-122)||(12077201-12077256)
chr7 (62-104)||(31673556-31673598)
chr7 (62-99)||(8485973-8486010)
[»] chr6 (20 HSPs)
chr6 (62-123)||(1101187-1101248)
chr6 (62-123)||(4111448-4111509)
chr6 (62-123)||(13276559-13276620)
chr6 (62-123)||(28890972-28891033)
chr6 (62-122)||(3027348-3027408)
chr6 (62-122)||(3729116-3729176)
chr6 (62-122)||(5153316-5153376)
chr6 (62-122)||(8437636-8437696)
chr6 (62-116)||(479243-479297)
chr6 (62-116)||(1558612-1558666)
chr6 (62-122)||(12296990-12297050)
chr6 (62-105)||(4229895-4229938)
chr6 (62-104)||(24011949-24011991)
chr6 (62-116)||(32187348-32187402)
chr6 (62-122)||(24848888-24848948)
chr6 (66-116)||(4174286-4174336)
chr6 (62-116)||(13041759-13041813)
chr6 (62-104)||(17156242-17156284)
chr6 (62-104)||(34858146-34858188)
chr6 (86-122)||(7458726-7458762)
[»] chr4 (29 HSPs)
chr4 (62-123)||(11845419-11845480)
chr4 (62-123)||(37011048-37011109)
chr4 (62-123)||(40730502-40730563)
chr4 (62-122)||(38308137-38308197)
chr4 (62-122)||(48826000-48826060)
chr4 (62-116)||(517554-517608)
chr4 (62-116)||(3097928-3097982)
chr4 (62-116)||(17981363-17981417)
chr4 (62-116)||(29590535-29590589)
chr4 (62-116)||(36488777-36488831)
chr4 (62-104)||(47691596-47691638)
chr4 (62-123)||(10010932-10010993)
chr4 (62-123)||(10018073-10018134)
chr4 (62-122)||(8753851-8753911)
chr4 (62-122)||(48089856-48089916)
chr4 (62-116)||(4422066-4422120)
chr4 (62-104)||(41487467-41487509)
chr4 (62-116)||(46903957-46904011)
chr4 (62-105)||(12582116-12582159)
chr4 (62-105)||(31842863-31842906)
chr4 (67-122)||(40412838-40412893)
chr4 (62-104)||(34553973-34554015)
chr4 (62-104)||(41324477-41324519)
chr4 (62-104)||(48801301-48801343)
chr4 (62-104)||(49389450-49389492)
chr4 (20-122)||(9627486-9627587)
chr4 (62-99)||(20039719-20039756)
chr4 (64-116)||(25040254-25040306)
chr4 (66-102)||(35041845-35041881)
[»] scaffold0129 (1 HSPs)
scaffold0129 (62-122)||(40900-40960)
[»] scaffold0037 (1 HSPs)
scaffold0037 (62-122)||(81404-81464)
[»] scaffold0259 (1 HSPs)
scaffold0259 (67-123)||(24807-24863)
[»] scaffold0067 (1 HSPs)
scaffold0067 (62-122)||(14403-14463)
[»] scaffold0275 (1 HSPs)
scaffold0275 (66-116)||(9157-9207)
[»] scaffold0886 (1 HSPs)
scaffold0886 (62-99)||(1851-1888)
[»] scaffold0422 (1 HSPs)
scaffold0422 (68-116)||(10644-10692)
[»] scaffold0065 (1 HSPs)
scaffold0065 (62-122)||(39974-40034)


Alignment Details
Target: chr1 (Bit Score: 313; Significance: 1e-176; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 20 - 403
Target Start/End: Original strand, 13884598 - 13884978
Alignment:
Q  20 gcctatgaaaggtcataagtcagactcagatctgcnnnnnnntttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatc 119  Q
    ||||||||||||||||||| ||| |||||| ||||       ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |    
T  13884598 gcctatgaaaggtcataagccaggctcagacctgcaaaaaaatttcgtaggccaggctcagacttatcaaagtctggcctgacctgatctattcccaacc 13884697  T
Q  120 ctaaacatgtcaaatgaatgctctgtttctttgttgaattaataataaattgaacgacgttgaatgaaacaaatggtaggggaggtctgtgcttgataag 219  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13884698 ctaaacatgtcaaatgaatgctctgtttctttgttgaattaat---aaattgaacgacgttgaatgaaacaaatggtaggggaggtctgtgcttgataag 13884794  T
Q  220 aaaatagaaccggtgtatgttacatttaagtagatcttaggagaggttaatgtattttcccctttggtttattaaatccgaaatattaaatttgtattca 319  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13884795 aaaatagagccggtgtatgttacatttaagtagatcttaggagaggttaatgtatttttccctttggtttattaaatccgaaatattaaatttgtattca 13884894  T
Q  320 acttctatttgttgaactctaatgacacattattatagattggaatgacaaatacgcattattttgggttgtgacccttttccg 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13884895 acttctatttgttgaactctaatgacacattattatagattggaatgacaaatacgcattattttgggttgcgacccttttccg 13884978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 488 - 542
Target Start/End: Original strand, 13885063 - 13885117
Alignment:
Q  488 ggacaagattaggaatgtgaagggcgcatgagaagaaaatatagacgaaaaataa 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13885063 ggacaagattaggaatgtgaagggcgcatgagaagaaaatatagacgaaaaataa 13885117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 8417287 - 8417227
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||    
T  8417287 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaatccta 8417227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 18353148 - 18353088
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| ||||    
T  18353148 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacccta 18353088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 19709037 - 19709097
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  19709037 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 19709097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 24038301 - 24038241
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||| ||||    
T  24038301 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctgacctattcccaacccta 24038241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 33785254 - 33785194
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  33785254 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 33785194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 52222785 - 52222725
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  52222785 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 52222725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 5500024 - 5500078
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  5500024 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 5500078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 19507117 - 19507063
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||    
T  19507117 tttcgtaggccaggctcaggcctatcaaagcctggtctggcctgacctattccca 19507063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 27090885 - 27090927
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  27090885 tttcgtaggccaggctcaggcctatcaaagtctggcctggcct 27090927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 39919664 - 39919610
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  39919664 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 39919610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 34084029 - 34083968
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||||||||||||| |||  ||||||| || |||||    
T  34084029 tttcgtaggccaggctcaggcctatcaaagtctggcctggtctggcctattcctaaccctaa 34083968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 39860526 - 39860587
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    |||||||| |||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  39860526 tttcgtagaccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 39860587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 6889573 - 6889633
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| ||||||||||||   |||||||||| ||||    
T  6889573 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctagcctattcccaacccta 6889633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 6891419 - 6891479
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| ||||||||||||   |||||||||| ||||    
T  6891419 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctagcctattcccaacccta 6891479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 17386374 - 17386418
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctga 106  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  17386374 tttcgtaggccaggctcaggcctatcaaaatctggcctggcctga 17386418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 17805873 - 17805813
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  17805873 tttcgtatgccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 17805813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 10805077 - 10805023
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||||||||||| || |||||||| |||||||||||||  |||||||||    
T  10805077 tttcgtaggccaggctcatgcctatcaaagcctggcctggcctggcctattccca 10805023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 13077354 - 13077300
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||  |||||||||    
T  13077354 tttcgtaggctaggctcaggcctatcaaagtctggcctgacctggcctattccca 13077300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 15321962 - 15322016
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||  |||||||||    
T  15321962 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattccca 15322016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 23555805 - 23555751
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||  |||||||||    
T  23555805 tttcgtaggccaggctcaggcctatcaaagcctgacctggcctggcctattccca 23555751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 31493506 - 31493548
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  31493506 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 31493548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 34050073 - 34050123
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctatt 112  Q
    ||||||||||||||||||  | ||||||||||||||||||||||| |||||    
T  34050073 tttcgtaggccaggctcaaacctatcaaagtctggcctggcctgacctatt 34050123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 42384260 - 42384218
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  42384260 tttcgtaggtcaggctcaggcctatcaaagtctggcctggcct 42384218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 44912657 - 44912603
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||| ||| ||||||| ||||||||||||||||| ||||| |||||||||    
T  44912657 tttcgtaggtcagactcaggcctatcaaagtctggcctgacctgacctattccca 44912603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 6305084 - 6305030
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||| |||||||||||||| | |||||||| |||||||||||||  |||||||||    
T  6305084 tttcataggccaggctcagacctatcaaagcctggcctggcctggcctattccca 6305030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 15849873 - 15849819
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||  |||||||||    
T  15849873 tttcgtaggccagactcaggcctatcaaatcctggcctggcctggcctattccca 15849819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 16452445 - 16452391
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||| ||||| |||||||||| |||||||| |||||||||||||  |||||||||    
T  16452445 tttcataggctaggctcaggcctatcaaagcctggcctggcctggcctattccca 16452391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 16461597 - 16461543
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||| ||||| |||||||||| |||||||| |||||||||||||  |||||||||    
T  16461597 tttcataggctaggctcaggcctatcaaagcctggcctggcctggcctattccca 16461543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 18342618 - 18342564
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||||||||||| || ||||||||||||| |||| |||  |||||||||    
T  18342618 tttcgtaggccaggctcaagcctatcaaagtctggtctggtctggcctattccca 18342564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 29523131 - 29523173
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||| | |||||||| ||||||||||||    
T  29523131 tttcgtaggccaggctcagacctatcaaagcctggcctggcct 29523173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 44779541 - 44779595
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||| |||| ||||||||||| |||||||| |||||||||||||  |||||||||    
T  44779541 tttcataggtcaggctcaggcctatcaaagcctggcctggcctggcctattccca 44779595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 44969087 - 44969045
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    |||||||||| |||||||||| |||||||| ||||||||||||    
T  44969087 tttcgtaggctaggctcaggcctatcaaagcctggcctggcct 44969045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 7109647 - 7109684
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcct 99  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  7109647 tttcgtaggccaggctcaggcctatcaaagcctggcct 7109684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 13253304 - 13253267
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcct 99  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  13253304 tttcgtaggccaggctcaggcctatcaaagcctggcct 13253267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 32239352 - 32239413
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    |||| ||||| |||||||||| |||||||  |||||||||||||| ||||||| || |||||    
T  32239352 tttcataggctaggctcaggcctatcaaaacctggcctggcctgacctattcctaaccctaa 32239413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 46846818 - 46846781
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcct 99  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  46846818 tttcgtaggccaggctcaggcctatcaaagcctggcct 46846781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 45372816 - 45372864
Alignment:
Q  69 ggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaa 117  Q
    ||||| |||||||| ||| |||| |||||||||||||| ||||||||||    
T  45372816 ggccatgctcaggcctataaaagcctggcctggcctgacctattcccaa 45372864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 9e-19; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 11877522 - 11877458
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaaaca 126  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| ||||||||    
T  11877522 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattcccaaccctaaaca 11877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 18158438 - 18158378
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| ||||    
T  18158438 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctattcccaacccta 18158378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 15397617 - 15397563
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  15397617 tttcgtaggccaggctcagacctatcaaagtctggcctggcctgacctattccca 15397563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 9163488 - 9163427
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  9163488 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 9163427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 38254752 - 38254699
Alignment:
Q  63 ttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  38254752 ttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattccca 38254699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 42062370 - 42062431
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  42062370 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 42062431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 40084043 - 40083983
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  40084043 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 40083983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 10017823 - 10017769
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  10017823 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 10017769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 14949588 - 14949642
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||| | |||||||| |||||||||||||| |||||||||    
T  14949588 tttcgtaggccaggctcagacctatcaaagcctggcctggcctgacctattccca 14949642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 491313 - 491253
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||||||| |||| |||||||| |||||||||||||  |||||||||| ||||    
T  491313 tttcgtaggccaggcttaggcctatcaaagcctggcctggcctggcctattcccaacccta 491253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 31271497 - 31271557
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||||||| |||| |||||||| |||||||||||||  |||||||||| ||||    
T  31271497 tttcgtaggccaggcttaggcctatcaaagcctggcctggcctggcctattcccaacccta 31271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 12880519 - 12880476
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctg 105  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  12880519 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctg 12880476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 17870105 - 17870147
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  17870105 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 17870147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 18295244 - 18295192
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcc 114  Q
    ||||||||||||| |||| || ||||||||||||||||| ||||| |||||||    
T  18295244 tttcgtaggccagactcaagcctatcaaagtctggcctgacctgacctattcc 18295192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 27332561 - 27332621
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| | |||||| |||| ||||||||  |||||||||| ||||    
T  27332561 tttcgtaggccaggctcaggcatttcaaagcctggtctggcctggcctattcccaacccta 27332621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 32298676 - 32298718
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||| | |||||||| ||||||||||||    
T  32298676 tttcgtaggccaggctcagacctatcaaagcctggcctggcct 32298718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 4049505 - 4049566
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||| ||  ||||| | ||||||||| ||||||||||||| |||||||||| |||||    
T  4049505 tttcgtaggtcaaactcagacctatcaaagtgtggcctggcctgacctattcccaaccctaa 4049566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 10931678 - 10931617
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||| ||||||| ||||||| ||||||||| || |  |||||||||| |||||    
T  10931678 tttcgtaggccagactcaggcctatcaaaatctggcctgaccaggcctattcccaaccctaa 10931617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 27054561 - 27054598
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcct 99  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  27054561 tttcgtaggccaggctcaggcctatcaaagcctggcct 27054598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 370216 - 370164
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcc 114  Q
    ||||||||  ||||||||||| ||||||||||| | ||||||||| |||||||    
T  370216 tttcgtagatcaggctcaggcctatcaaagtcttgtctggcctgacctattcc 370164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 6644221 - 6644281
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| ||| |||| |||| |||| |||  |||||||||| ||||    
T  6644221 tttcgtaggccaggctcaggcctattaaagcctggtctggtctggcctattcccaacccta 6644281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 7079050 - 7078990
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||||||||| || |||||||| |||||||| ||||  | |||||||| ||||    
T  7079050 tttcgtaggccaggctcaagcctatcaaagcctggcctgacctggcccattcccaacccta 7078990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 33069489 - 33069550
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||    
T  33069489 tttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattcccaaccctaa 33069550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 1782750 - 1782811
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  1782750 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 1782811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 39391110 - 39391049
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  39391110 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 39391049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 40000845 - 40000906
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  40000845 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 40000906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 13596221 - 13596161
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  13596221 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 13596161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 19421022 - 19420962
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  19421022 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 19420962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 20647861 - 20647921
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||| ||||    
T  20647861 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctatttccaacccta 20647921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 28793708 - 28793648
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||| ||||    
T  28793708 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctgacctatttccaacccta 28793648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 29076924 - 29076864
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  29076924 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 29076864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 4357088 - 4357142
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  4357088 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 4357142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 26994825 - 26994879
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||||||||||||| |||  |||||||||    
T  26994825 tttcgtaggccaggctcaggcctatcaaagtctggcctggtctggcctattccca 26994879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 34705379 - 34705437
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaaa 124  Q
    ||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||||    
T  34705379 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaaa 34705437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 9338326 - 9338387
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||| ||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  9338326 tttcgcaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 9338387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 4481709 - 4481649
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| | |||||| |||||||||||||  |||||||||| ||||    
T  4481709 tttcgtaggccaggctcaggcctttcaaagcctggcctggcctggcctattcccaacccta 4481649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 24541042 - 24541102
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||  |||||||||| ||||    
T  24541042 tttcgtaggccaggctcaggcctatcaaagcctggcctggcttggcctattcccaacccta 24541102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 33249472 - 33249412
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||  |||||||||| ||||    
T  33249472 tttcgtaggccaggctcaggcctatcaaagcctggcttggcctggcctattcccaacccta 33249412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 47597150 - 47597210
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||  |||||||||| ||||    
T  47597150 tttcgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccaacccta 47597210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 2222148 - 2222190
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  2222148 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 2222190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 7046801 - 7046855
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||| ||| ||| ||||||||||| ||||||||||| |||||||||    
T  7046801 tttcgtaggccagactctggcctatcaaagtctagcctggcctgacctattccca 7046855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 24133816 - 24133774
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  24133816 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 24133774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 41129787 - 41129829
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  41129787 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 41129829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 41636343 - 41636289
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||  |||||||||    
T  41636343 tttcgtaggccagactcaggcctatcaaagcctggcctggcctggcctattccca 41636289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 42294169 - 42294127
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  42294169 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 42294127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 51302421 - 51302367
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||  |||||||||    
T  51302421 tttcgtaggccaggctcaggcctatcaaagcctggcctagcctggcctattccca 51302367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 40489111 - 40489171
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||| ||||||||||||| |||||||| |||| |||||||   |||||||||||||||    
T  40489111 tttcgtaagccaggctcaggcctatcaaagcctggtctggcctagcctattcccaatccta 40489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 34636397 - 34636354
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctg 105  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||    
T  34636397 tttcgtaggccaggctcaggcctatcaaagcctgacctggcctg 34636354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 25593737 - 25593791
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||||  |||||||||    
T  25593737 tttcgtaggccaggctcaggcctatcaaagcctgacctgccctggcctattccca 25593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 34422732 - 34422774
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||    
T  34422732 tttcgtaggccaggctcgggcctatcaaagcctggcctggcct 34422774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 39889381 - 39889327
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||| |||| |||  |||||||||    
T  39889381 tttcgtaggccaggctcaggcctatcaaagcctggtctggtctggcctattccca 39889327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 46136428 - 46136470
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||    
T  46136428 tttcgtaggccagactcaggcctatcaaagcctggcctggcct 46136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 52174871 - 52174913
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||    
T  52174871 tttcgtaggccagactcaggcctatcaaagcctggcctggcct 52174913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 54447641 - 54447587
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||| ||||||||||||| |||||||| |||||||||| ||  |||||||||    
T  54447641 tttcgtatgccaggctcaggcctatcaaagcctggcctggcttggcctattccca 54447587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 54650501 - 54650459
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||| | |||||||| ||||||||||||    
T  54650501 tttcgtaggccaggctcagacctatcaaagcctggcctggcct 54650459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 43010300 - 43010361
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||| | ||||||||||| |||||  |||  |||||||||| |||||    
T  43010300 tttcgtaggccaggctcagacctatcaaagtctagcctgatctggcctattcccaaccctaa 43010361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 6420021 - 6420073
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcc 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  6420021 tttcgtaggccaggctcaggcctatcaaagtctggcctggcctgacctattcc 6420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 34726389 - 34726450
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  34726389 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 34726450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 40737860 - 40737799
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  40737860 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 40737799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 13029170 - 13029230
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  13029170 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 13029230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 21198200 - 21198260
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  21198200 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 21198260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 36985444 - 36985511
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaaacatgt 129  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||  |||||||||| |||||| ||||    
T  36985444 tttcgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattcccaaccctaaatatgt 36985511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 2182783 - 2182837
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||  |||||||||    
T  2182783 tttcgtaggccaggctcaggcctatcaaagtctggcctgacctggcctattccca 2182837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 2995107 - 2995161
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||    
T  2995107 tttcgtaggccaggctcaggcctatcaaagtctggtctggcctggcctattccca 2995161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 6283392 - 6283338
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||| |||| || ||||||||||||||||||||||| |||||||||    
T  6283392 tttcgtaggccagactcaagcctatcaaagtctggcctggcctgacctattccca 6283338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 6431576 - 6431522
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||    
T  6431576 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctgacctattccca 6431522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 29044165 - 29044111
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  29044165 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 29044111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 12033892 - 12033948
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||| |||||||||||||||||||||   |||||||||| ||||    
T  12033892 gtaggccaggctcaggcctatcaaagtctggcctggcctagcctattcccaacccta 12033948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 26260330 - 26260390
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||  |||||||||| ||||    
T  26260330 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaacccta 26260390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 38448096 - 38448156
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||| ||| ||||    
T  38448096 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattctcaacccta 38448156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 29768350 - 29768307
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctg 105  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  29768350 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctg 29768307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 35959389 - 35959335
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||  |||||||||    
T  35959389 tttcgtaggccaggctcaggcctatcaaagcttggcctggcctggcctattccca 35959335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 32084178 - 32084238
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||  |||||| ||| ||||    
T  32084178 tttcgtaggccagactcaggcctatcaaagtctgccctggcctggcctattctcaacccta 32084238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 17852818 - 17852869
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaa 117  Q
    ||||||||| ||||||| |||||||||||| |||||||||  ||||||||||    
T  17852818 gtaggccagactcaggcctatcaaagtctgacctggcctggcctattcccaa 17852869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 5936835 - 5936877
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||    
T  5936835 tttcgtaggccaggctcgggcctatcaaagcctggcctggcct 5936877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 7592607 - 7592649
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||    
T  7592607 tttcgtaggccaggctcaggcgtatcaaagcctgacctggcct 7592649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 44092872 - 44092926
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||| | |||||||  |||||||||||||  |||||||||    
T  44092872 tttcgtaggccaggctcagacctatcaaaacctggcctggcctggcctattccca 44092926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 31452946 - 31452999
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccc 115  Q
    ||||||||||||  ||||||| ||||||||||||||||| ||||  ||||||||    
T  31452946 tttcgtaggccaaactcaggcctatcaaagtctggcctgacctggcctattccc 31452999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 95
Target Start/End: Complemental strand, 43616365 - 43616332
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctg 95  Q
    ||||||||||||||||||||| ||||||||||||    
T  43616365 tttcgtaggccaggctcaggcctatcaaagtctg 43616332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 23950348 - 23950293
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaa 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  23950348 tttcgtaggccaggctcaggcttatcaaagcctggcctggcctggcctattcccaa 23950293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 24580501 - 24580447
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  |||||||||    
T  24580501 tttcgtaggccaggctcaggcctatcaaagtctggcctggcctggcctattccca 24580447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 26241327 - 26241267
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  26241327 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 26241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 32551637 - 32551697
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| ||||||||| |||| |||||||||| ||||    
T  32551637 tttcgtaggccaggctcaggcctatcaaagcctggcctggtctgacctattcccaacccta 32551697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 12638045 - 12637991
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||||||||| |||| |||||||| |||||||||||||| |||||||||    
T  12638045 tttcgtaggccaggcttaggcctatcaaagcctggcctggcctgacctattccca 12637991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 14921426 - 14921372
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  14921426 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 14921372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 16365045 - 16365099
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||    
T  16365045 tttcgtaggccagactcaggcctatcaaagtctggcctggcctggcctattccca 16365099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 38600891 - 38600945
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  38600891 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 38600945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 44755604 - 44755550
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  44755604 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 44755550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 36684732 - 36684671
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||  |||||||||| |||||    
T  36684732 tttcgtaggccaggctcaggcctatcaaagcgtggcctggcctggcctattcccaaccctaa 36684671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 7323255 - 7323315
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||  |||||||||| ||||    
T  7323255 tttcgtaggctaggctcaggcctattaaagtctggcctggcctggcctattcccaacccta 7323315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 16383970 - 16384025
Alignment:
Q  67 taggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  16383970 taggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 16384025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 7383235 - 7383289
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||||| |||||||  |||||||||    
T  7383235 tttcgtaggccaggctcaggcctatcaaagcctggcttggcctggcctattccca 7383289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 103
Target Start/End: Original strand, 33303845 - 33303886
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcc 103  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  33303845 tttcgtaggccaggctcaggcctatcaaagcctggcctggcc 33303886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 11989089 - 11989029
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||| |||||||||||||| ||||||||  ||||||||||||  |||||||||| ||||    
T  11989089 tttcgttggccaggctcaggcctatcaaagcatggcctggcctggcctattcccaacccta 11989029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 26106438 - 26106378
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||| |||||||| | |||||| |||||||||||||  |||||||||| ||||    
T  26106438 tttcgtaggccaagctcaggcctttcaaagcctggcctggcctggcctattcccaacccta 26106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 36054707 - 36054767
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||  ||  |||||||||| ||||    
T  36054707 tttcgtaggccaggctcaggcctatcaaagcctggcctggtatggcctattcccaacccta 36054767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 39506693 - 39506753
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||  ||||| |||| ||||    
T  39506693 tttcgtaggccaggctcaggcctttcaaagtctggtctggcctggcctatttccaacccta 39506753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 8000076 - 8000034
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| || |||||||||    
T  8000076 tttcgtaggccaggctcaggcctatcaaagcctagcctggcct 8000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 12615180 - 12615138
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||    
T  12615180 tttcgtaggtcaggctcaggcctatcaaagcctggcctggcct 12615138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 32983265 - 32983319
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||  |||||||||  |||||||||    
T  32983265 tttcgtaggccaggctcaggcctatcaaagcctaacctggcctggcctattccca 32983319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 35056239 - 35056185
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||||  |||||||||    
T  35056239 tttcgtaggccaggctcaggcctatcaaagcctgacctgacctggcctattccca 35056185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 44710137 - 44710083
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||| |||||||||| ||||||||||||| ||| ||||  |||||||||    
T  44710137 tttcgtaggcgaggctcaggcctatcaaagtctggtctgacctggcctattccca 44710083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 10921128 - 10921087
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcc 103  Q
    ||||||||| ||||||||||| |||||||| |||||||||||    
T  10921128 tttcgtaggtcaggctcaggcctatcaaagcctggcctggcc 10921087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 44848076 - 44848022
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||  |||||||||    
T  44848076 tttcgtaggccaggctcaggcttatcaaagcctggcctggcctggcctattccca 44848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 14776247 - 14776308
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  14776247 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 14776308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 41892183 - 41892122
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||  |||||||||| |||||    
T  41892183 tttcgtaagccaggctcaggcctatcaaagtctggcctggcctggcctattcccaaccctaa 41892122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 2732350 - 2732290
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  2732350 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 2732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 3357020 - 3356960
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  3357020 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 3356960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 11410581 - 11410521
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  11410581 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 11410521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 15943183 - 15943243
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  15943183 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 15943243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 10227918 - 10227875
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctg 105  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  10227918 tttcgtaggccaggctcaggcctatcaaagtctggcctggcctg 10227875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 12419217 - 12419271
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  12419217 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 12419271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 15757709 - 15757763
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||    
T  15757709 tttcgtaggccaggctcaggcctatcaaagcctgacctggcctgacctattccca 15757763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 1411586 - 1411647
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    |||||||||||| |||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  1411586 tttcgtaggccaagctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 1411647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 2196104 - 2196043
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    |||||||||||||  |||||| ||||||||||||| ||||||||| |||||||||| |||||    
T  2196104 tttcgtaggccagattcaggcctatcaaagtctggtctggcctgacctattcccaaccctaa 2196043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 43596239 - 43596294
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaa 117  Q
    |||||||||||| |||||||| |||||||| |||||||||||||  ||||||||||    
T  43596239 tttcgtaggccaagctcaggcctatcaaagcctggcctggcctggcctattcccaa 43596294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 2941197 - 2941247
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||| ||||||||||| ||||||||||||||||||||||  |||||||||    
T  2941197 gtaggtcaggctcaggcctatcaaagtctggcctggcctggcctattccca 2941247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 13391110 - 13391060
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  13391110 gtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 13391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 18533428 - 18533470
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  18533428 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 18533470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 21806560 - 21806506
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||  |||||||||    
T  21806560 tttcgtaggccaggctcaggcctatcaaagcctggtctggcctggcctattccca 21806506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 23671210 - 23671264
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||| || |||| ||||||||||||||||||||||  |||||||||    
T  23671210 tttcgtaggccagacttaggcctatcaaagtctggcctggcctggcctattccca 23671264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 31377425 - 31377371
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    |||||||||||||| |||||| |||||||| |||||||||||||  |||||||||    
T  31377425 tttcgtaggccaggttcaggcctatcaaagcctggcctggcctggcctattccca 31377371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 41902902 - 41902956
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||||||||  |||||||  |||||||||    
T  41902902 tttcgtaggccaggctcaggcctatcaaagtctggtatggcctggcctattccca 41902956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 34521308 - 34521369
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||| ||||||||||| |||||||| |||||||| ||||  |||||||||| |||||    
T  34521308 tttcgtaggtcaggctcaggcctatcaaagcctggcctgacctggcctattcccaaccctaa 34521369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 41399775 - 41399834
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| | |||||||||||  |||||||||| ||||    
T  41399775 tttcgtaggccaggctcaggcctatcaaag-ccggcctggcctggcctattcccaacccta 41399834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 12077256 - 12077201
Alignment:
Q  67 taggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||| | ||||| ||||||||||||||||||||||  |||||||||| ||||    
T  12077256 taggccagacccaggcctatcaaagtctggcctggcctggcctattcccaacccta 12077201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 31673598 - 31673556
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||    
T  31673598 tttcgtaggtcaggctcaggcctatcaaagtctagcctggcct 31673556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 8485973 - 8486010
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcct 99  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  8485973 tttcgtaggccaggctcaggcctatcaaagcctggcct 8486010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 1101248 - 1101187
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  1101248 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 1101187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 4111448 - 4111509
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  4111448 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 4111509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 13276620 - 13276559
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  13276620 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 13276559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 28890972 - 28891033
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  28890972 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 28891033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 3027348 - 3027408
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  3027348 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 3027408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 3729116 - 3729176
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  3729116 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 3729176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 5153376 - 5153316
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||| |||||||||| |||||||||||||  |||||||||| ||||    
T  5153376 tttcgtaggccaggctcagacttatcaaagcctggcctggcctggcctattcccaacccta 5153316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 8437636 - 8437696
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||| ||||    
T  8437636 tttcgtaggccagactcaggcctatcaaagtctggcctggcctggcctattcccaacccta 8437696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 479243 - 479297
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||    
T  479243 tttcgtaggccaggctcaggcctatcaaagcctggtctggcctgacctattccca 479297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 1558666 - 1558612
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||    
T  1558666 tttcgtaggccaggctcaggcctatcaaagcctgacctggcctgacctattccca 1558612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 12296990 - 12297050
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||  |||||||||| ||||    
T  12296990 tttcgtaggccagactcagacctatcaaagtctggcctggcctggcctattcccaacccta 12297050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 4229895 - 4229938
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctg 105  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  4229895 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctg 4229938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 24011991 - 24011949
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  24011991 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 24011949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 32187348 - 32187402
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| ||||||||  ||||||||||||  |||||||||    
T  32187348 tttcgtaggccaggctcaggcctatcaaagcatggcctggcctggcctattccca 32187402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 24848948 - 24848888
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||  ||||| |||| ||||    
T  24848948 tttcgtaggccagactcaggcctatcaaagtctggcctcgcctggcctatttccaacccta 24848888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 4174286 - 4174336
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||| |||||||| ||||| |||||||  |||||||||    
T  4174286 gtaggccaggctcaggcctatcaaagcctggcatggcctggcctattccca 4174336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 13041759 - 13041813
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||| ||||||| |||||||| || ||||||||||  |||||||||    
T  13041759 tttcgtaggccagactcaggcctatcaaagcctagcctggcctggcctattccca 13041813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 17156284 - 17156242
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||  ||||||||||||    
T  17156284 tttcgtaggccaggctcaggcctatcaaaacctggcctggcct 17156242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 34858188 - 34858146
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||| | |||||||| ||||||||||||    
T  34858188 tttcgtaggccaggctcagacctatcaaagcctggcctggcct 34858146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 7458762 - 7458726
Alignment:
Q  86 tcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  7458762 tcaaagtctggcctggcctgacctattcccaacccta 7458726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 11845419 - 11845480
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  11845419 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 11845480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 37011048 - 37011109
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||||||||||||||||   |||||||||| |||||    
T  37011048 tttcgtaggccaggctcaggcctatcaaagtctggcctggcctagcctattcccaaccctaa 37011109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 40730502 - 40730563
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| |||||    
T  40730502 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaaccctaa 40730563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 38308137 - 38308197
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  38308137 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 38308197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 48826060 - 48826000
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  48826060 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 48826000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 517608 - 517554
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| |||||||||    
T  517608 tttcgtaggccaggctcagacctatcaaagtctggcctgacctgacctattccca 517554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 3097928 - 3097982
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  3097928 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 3097982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 17981363 - 17981417
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||    
T  17981363 tttcgtaggccaggctcaggcctatcaaagtctggtctggcctggcctattccca 17981417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 29590535 - 29590589
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||    
T  29590535 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattccca 29590589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 36488831 - 36488777
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||| | ||||||||||||||||||||||  |||||||||    
T  36488831 tttcgtaggccaggctcagacctatcaaagtctggcctggcctggcctattccca 36488777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 47691638 - 47691596
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  47691638 tttcgtaggccaggctcaggcctatcaaagtctggcctggcct 47691596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 10010932 - 10010993
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||  |||||||||| |||||    
T  10010932 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaaccctaa 10010993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 10018073 - 10018134
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||  |||||||||| |||||    
T  10018073 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctggcctattcccaaccctaa 10018134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 8753851 - 8753911
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||||||||| || |||||||| |||||||||||||  |||||||||| ||||    
T  8753851 tttcgtaggccaggctcatgcctatcaaagcctggcctggcctggcctattcccaacccta 8753911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 48089856 - 48089916
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||  |||||||||| ||||    
T  48089856 tttcgtaggccaggctcaggcctatcaaagcctgacctggcctggcctattcccaacccta 48089916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 4422120 - 4422066
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||||||  |||||||| |||||||||||||  |||||||||    
T  4422120 tttcgtaggccaggctcaggtctatcaaagcctggcctggcctggcctattccca 4422066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 41487509 - 41487467
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  41487509 tttcgtaggccaggctcaggcctatcaaagcctggcctggcct 41487467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 46903957 - 46904011
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||| ||||||||||| ||||||||  |||||||||||| ||||||||||    
T  46903957 tttcgtaggtcaggctcaggcctatcaaagcatggcctggcctggtctattccca 46904011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 12582159 - 12582116
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctg 105  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||    
T  12582159 tttcgtaggccagactcaggcctatcaaagcctggcctggcctg 12582116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 31842906 - 31842863
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctg 105  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||    
T  31842906 tttcgtaggccaggctcaggcctatcaaagcctggcctgacctg 31842863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 40412838 - 40412893
Alignment:
Q  67 taggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||| || ||||||| |||||||| |||||||||||||| |||||||||| ||||    
T  40412838 taggctagactcaggcctatcaaagcctggcctggcctgacctattcccaacccta 40412893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 34553973 - 34554015
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    |||||||||||||||||| || |||||||| ||||||||||||    
T  34553973 tttcgtaggccaggctcaagcctatcaaagcctggcctggcct 34554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 41324477 - 41324519
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||    
T  41324477 tttcgtaggccagactcaggcctatcaaagcctggcctggcct 41324519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 48801301 - 48801343
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    |||||| |||||||||||||| |||||||| ||||||||||||    
T  48801301 tttcgttggccaggctcaggcctatcaaagcctggcctggcct 48801343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Complemental strand, 49389492 - 49389450
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcct 104  Q
    ||||||||||||||||||||| |||||||  ||||||||||||    
T  49389492 tttcgtaggccaggctcaggcctatcaaaacctggcctggcct 49389450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 9627587 - 9627486
Alignment:
Q  20 gcctatgaaaggtcataagtcagactcagatctgcnnnnnnntttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatc 119  Q
    |||||||||||| |||| |||||||||||  ||||       ||| ||||||||||||||||| |||||||| |||||||| ||||  ||||| |||| |    
T  9627587 gcctatgaaaggccataggtcagactcaggcctgcaaattctttt-gtaggccaggctcaggcctatcaaagcctggcctgacctggcctatttccaacc 9627489  T
Q  120 cta 122  Q
    |||    
T  9627488 cta 9627486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 20039719 - 20039756
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcct 99  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  20039719 tttcgtaggccaggctcaggcctatcaaagcctggcct 20039756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 25040254 - 25040306
Alignment:
Q  64 tcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||| |||| || ||||||||||||  ||||||||| |||||||||    
T  25040254 tcgtaggccagactcaagcctatcaaagtctgatctggcctgacctattccca 25040306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 35041845 - 35041881
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggc 102  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  35041845 gtaggccaggctcaggcctatcaaagtctggtctggc 35041881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 40960 - 40900
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||||||||||| |||||||| |||||||||||||  |||||||||| ||||    
T  40960 tttcgtaggccaggctcaggcctatcaaagcctggcctggcctggcctattcccaacccta 40900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 81404 - 81464
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||||||||| || |||||||| |||||||||||||  |||||||||| ||||    
T  81404 tttcgtaggccaggctcaagcctatcaaagcctggcctggcctggcctattcccaacccta 81464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 24863 - 24807
Alignment:
Q  67 taggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatcctaa 123  Q
    ||||||||||||||||||||||||| ||||| ||| |||  |||||||||| |||||    
T  24863 taggccaggctcaggcttatcaaagcctggcttggtctggcctattcccaaccctaa 24807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 14403 - 14463
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    ||||||||||||| ||||||| |||||||| |||||||| ||||  |||||||||| ||||    
T  14403 tttcgtaggccagactcaggcctatcaaagcctggcctgacctggcctattcccaacccta 14463  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 9207 - 9157
Alignment:
Q  66 gtaggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||||| |||||||| |||| ||||||||  |||||||||    
T  9207 gtaggccaggctcaggcctatcaaagcctggtctggcctggcctattccca 9157  T

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Target: scaffold0886 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 1851 - 1888
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcct 99  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  1851 tttcgtaggccaggctcaggcctatcaaagcctggcct 1888  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 10692 - 10644
Alignment:
Q  68 aggccaggctcaggcttatcaaagtctggcctggcctgatctattccca 116  Q
    ||||||||||||||| |||||||| |||||||| ||||  |||||||||    
T  10692 aggccaggctcaggcctatcaaagcctggcctgacctggcctattccca 10644  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 40034 - 39974
Alignment:
Q  62 tttcgtaggccaggctcaggcttatcaaagtctggcctggcctgatctattcccaatccta 122  Q
    |||||||||||||||||| || |||||||| ||| ||||| |||  |||||||||| ||||    
T  40034 tttcgtaggccaggctcaagcctatcaaagcctgacctggtctggcctattcccaacccta 39974  T

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