View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18767_low_2 (Length: 296)
Name: NF18767_low_2
Description: NF18767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18767_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 279
Target Start/End: Complemental strand, 28020413 - 28020147
Alignment:
| Q |
8 |
gagatgaagagaaaacgcaacaatggggaacaattcatccattttcttctgatcggagatttgattaaggttttaggtgaaaatggtaatggaaatggcg |
107 |
Q |
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| T |
28020413 |
gagaagaagagaaaacgcaacaatggggaacaattcatccattttcttctgatcggagatttgattaaggttttaggtgaaaatggtaatggaaatggcg |
28020314 |
T |
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| Q |
108 |
gggttttatatgaggtggacgatggaagaaagagcaggattgtacacgtggaatattgctacactcttcatctttaatttggtaaaaaagaaaattcaga |
207 |
Q |
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| T |
28020313 |
gggttttatatgaggtggacgatggaagaaagagcaggattgtacacgtggaatattgctacactctccatctttaatttggtaaaaaagaaaattcaga |
28020214 |
T |
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| Q |
208 |
caaataataataaataatattgttctgaatacaacaagataacatatgatcattaa-aatgatagtcttaata |
279 |
Q |
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|||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
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| T |
28020213 |
caaata---ataaataatattgttctgaat---acaagataacatatgatcattaataatgatagtcttaata |
28020147 |
T |
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