View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18769_high_11 (Length: 412)

Name: NF18769_high_11
Description: NF18769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18769_high_11
NF18769_high_11
[»] chr1 (15 HSPs)
chr1 (14-260)||(45010512-45010758)
chr1 (270-396)||(45010886-45011012)
chr1 (272-309)||(2492529-2492566)
chr1 (14-74)||(10303136-10303196)
chr1 (270-305)||(47969533-47969568)
chr1 (270-309)||(50503231-50503270)
chr1 (270-308)||(9590798-9590836)
chr1 (307-349)||(24981942-24981984)
chr1 (307-344)||(18353673-18353710)
chr1 (270-307)||(45639557-45639594)
chr1 (269-309)||(15278612-15278652)
chr1 (269-309)||(23575371-23575411)
chr1 (269-309)||(31998242-31998282)
chr1 (270-306)||(39362857-39362893)
chr1 (322-354)||(49586081-49586113)
[»] chr5 (9 HSPs)
chr5 (307-359)||(43117373-43117425)
chr5 (259-309)||(22650909-22650959)
chr5 (270-307)||(71307-71344)
chr5 (318-351)||(71373-71406)
chr5 (309-346)||(8717810-8717847)
chr5 (307-351)||(10437738-10437782)
chr5 (319-351)||(18033468-18033500)
chr5 (323-351)||(34867546-34867574)
chr5 (260-304)||(43482830-43482874)
[»] chr2 (13 HSPs)
chr2 (259-309)||(2050127-2050177)
chr2 (307-351)||(27331860-27331904)
chr2 (319-351)||(40204435-40204467)
chr2 (270-309)||(31101997-31102036)
chr2 (318-348)||(7079368-7079398)
chr2 (270-308)||(15859605-15859643)
chr2 (320-352)||(1961303-1961335)
chr2 (322-354)||(2050082-2050114)
chr2 (307-351)||(21183428-21183472)
chr2 (307-351)||(31024166-31024210)
chr2 (307-351)||(38465784-38465828)
chr2 (307-339)||(40874335-40874367)
chr2 (269-309)||(42263068-42263108)
[»] chr8 (5 HSPs)
chr8 (270-309)||(10117023-10117062)
chr8 (269-309)||(32016821-32016861)
chr8 (270-309)||(3225828-3225867)
chr8 (270-308)||(34580626-34580664)
chr8 (307-351)||(10934704-10934748)
[»] chr4 (12 HSPs)
chr4 (272-309)||(39235190-39235227)
chr4 (270-309)||(10572774-10572813)
chr4 (270-309)||(18626760-18626799)
chr4 (271-309)||(41654553-41654591)
chr4 (318-351)||(6975045-6975078)
chr4 (322-351)||(16537259-16537288)
chr4 (307-351)||(2582803-2582847)
chr4 (319-351)||(14450952-14450984)
chr4 (319-351)||(19934751-19934783)
chr4 (270-306)||(38298138-38298174)
chr4 (269-309)||(42911668-42911708)
chr4 (307-351)||(55935983-55936026)
[»] chr6 (7 HSPs)
chr6 (307-351)||(26527185-26527229)
chr6 (307-352)||(8449677-8449722)
chr6 (307-352)||(8458481-8458526)
chr6 (269-309)||(10731520-10731560)
chr6 (318-354)||(12104737-12104773)
chr6 (318-346)||(16121077-16121105)
chr6 (318-350)||(33689340-33689372)
[»] chr7 (6 HSPs)
chr7 (270-309)||(21586867-21586906)
chr7 (270-308)||(24280875-24280913)
chr7 (322-351)||(28228983-28229012)
chr7 (269-309)||(24936728-24936768)
chr7 (307-351)||(25245244-25245288)
chr7 (307-351)||(41404010-41404054)
[»] chr3 (15 HSPs)
chr3 (270-309)||(19810938-19810977)
chr3 (270-309)||(37807563-37807602)
chr3 (321-352)||(51253879-51253910)
chr3 (259-309)||(14756445-14756495)
chr3 (270-308)||(37897730-37897768)
chr3 (321-351)||(51253918-51253948)
chr3 (318-351)||(331794-331827)
chr3 (318-351)||(24694340-24694373)
chr3 (272-309)||(41253984-41254021)
chr3 (307-351)||(7823968-7824012)
chr3 (319-359)||(8504837-8504877)
chr3 (307-351)||(41254032-41254076)
chr3 (320-352)||(52215874-52215906)
chr3 (273-309)||(52215931-52215967)
chr3 (307-351)||(52215981-52216025)
[»] scaffold0002 (1 HSPs)
scaffold0002 (269-309)||(491903-491943)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-122; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 45010512 - 45010758
Alignment:
Q  14 ttctaagagttttaacgttgatacatgtctaaaattgcattcaaactcaagactttggttacgttgcaatatgacatgtatctataatgtgatacgtatc 113  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45010512 ttctaggaattttaacgttgatacatgtctaaaattgcattcaaactcaagactttggttacgttgcaatatgacatgtatctataatgtgatacgtatc 45010611  T
Q  114 taaaagaattgagtatacataaaatatcataaacacctttcaaaaaggaaaatcctaaacatatatgataatatatttattgttttaagaagctaaatta 213  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45010612 taaaagaattgagtatacaggaaatatcataaacacctttcaaaaaggaaaatcctaaacatatatgataatatatttattgttttaagaagcgaaatta 45010711  T
Q  214 gacgtctaaatcaacatcgaagagaatcaaacttgaaaccttgagga 260  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  45010712 gacgtctaaatcaacatcgaagagaatcaaacttaaaaccttgagga 45010758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 270 - 396
Target Start/End: Original strand, 45010886 - 45011012
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatctaaaattgtgatttttgcttataatagtgatcggaggatgtaaatcttaaagtatccaag 369  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  45010886 ttaatgatgtatatgatatttattataaaccatatacatctaaaattgtgatttttgcttataatagtgatcggatggtgtaaatcttaaagtatccaag 45010985  T
Q  370 gattattactatccgatatgtatctaa 396  Q
    |||||||||||||||||||||||||||    
T  45010986 gattattactatccgatatgtatctaa 45011012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 2492566 - 2492529
Alignment:
Q  272 aatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  2492566 aatgatgtatatgatctttattataaaccacatacatc 2492529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 10303196 - 10303136
Alignment:
Q  14 ttctaagagttttaacgttgatacatgtctaaaattgcattcaaactcaagactttggtta 74  Q
    |||||||||||||||||||| | ||||||||||  || |||| ||||||||||||| ||||    
T  10303196 ttctaagagttttaacgttgttgcatgtctaaagctggattcgaactcaagactttagtta 10303136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 47969533 - 47969568
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacata 305  Q
    ||||||||||||||||||||||||||| ||||||||    
T  47969533 ttaatgatgtatatgatatttattatagaccacata 47969568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 50503231 - 50503270
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  50503231 ttaatgatgtatatgatctttattatagaccacatacatc 50503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 9590836 - 9590798
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacat 308  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  9590836 ttaatgatgtatatgatctttattatataccacatacat 9590798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 349
Target Start/End: Original strand, 24981942 - 24981984
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatg 349  Q
    |||||||||  |||||||||||||||||||||| |||||||||    
T  24981942 atctaaaatgttgatttttgcttataatagtgaccggaggatg 24981984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 344
Target Start/End: Original strand, 18353673 - 18353710
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcgga 344  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  18353673 atctaaaattatgatttttgcttataatagtgaccgga 18353710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 45639557 - 45639594
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacataca 307  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  45639557 ttaatgatgtatatgatctttattatagaccacataca 45639594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 15278612 - 15278652
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||| |||| | ||||||||||||||||||||    
T  15278612 tttaatgatgtatgtgatctatattataaaccacatacatc 15278652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 23575411 - 23575371
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||| ||||||| ||||||||| ||||||||||||    
T  23575411 tttaatgatgcatatgatctttattatagaccacatacatc 23575371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 31998282 - 31998242
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||||||||||| ||||||||| | ||||||||||    
T  31998282 tttaatgatgtatatgatctttattatagatcacatacatc 31998242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 39362857 - 39362893
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatac 306  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  39362857 ttaatgatgtatatgatctttattatagaccacatac 39362893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 354
Target Start/End: Complemental strand, 49586113 - 49586081
Alignment:
Q  322 ttttgcttataatagtgatcggaggatgtaaat 354  Q
    |||||||||||||||||| ||||||||||||||    
T  49586113 ttttgcttataatagtgaccggaggatgtaaat 49586081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 43117425 - 43117373
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgtaaatcttaa 359  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  43117425 atctaaaatattgatttttgcttataatagtgatcggagggtgtaaatcttaa 43117373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 22650959 - 22650909
Alignment:
Q  259 gatttattgttttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||  |||||||||||||||| | ||||||||| ||||||||||||    
T  22650959 gatttatttatttaatgatgtatatggtctttattatagaccacatacatc 22650909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 71307 - 71344
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacataca 307  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  71307 ttaatgatgtatatgatctttattatagaccacataca 71344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 351
Target Start/End: Original strand, 71373 - 71406
Alignment:
Q  318 tgatttttgcttataatagtgatcggaggatgta 351  Q
    ||||||||||||||||||||||||||||| ||||    
T  71373 tgatttttgcttataatagtgatcggagggtgta 71406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 346
Target Start/End: Original strand, 8717810 - 8717847
Alignment:
Q  309 ctaaaattgtgatttttgcttataatagtgatcggagg 346  Q
    |||||| | |||||||||||||||||||||||||||||    
T  8717810 ctaaaaatttgatttttgcttataatagtgatcggagg 8717847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 10437738 - 10437782
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||    
T  10437738 atctaaaatgttgatttttgcttataatagtgaccggagggtgta 10437782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 351
Target Start/End: Original strand, 18033468 - 18033500
Alignment:
Q  319 gatttttgcttataatagtgatcggaggatgta 351  Q
    ||||||||||||||||||||| |||||||||||    
T  18033468 gatttttgcttataatagtgaccggaggatgta 18033500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 351
Target Start/End: Complemental strand, 34867574 - 34867546
Alignment:
Q  323 tttgcttataatagtgatcggaggatgta 351  Q
    |||||||||||||||||||||||||||||    
T  34867574 tttgcttataatagtgatcggaggatgta 34867546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 43482874 - 43482830
Alignment:
Q  260 atttattgttttaatgatgtatatgatatttattataaaccacat 304  Q
    |||||||  |||||||||||||||||| ||||||||| |||||||    
T  43482874 atttattcatttaatgatgtatatgatctttattatagaccacat 43482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 2050127 - 2050177
Alignment:
Q  259 gatttattgttttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  2050127 gatttatttatttaatgatgtatatgatctttattataaaccacatacatc 2050177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 27331860 - 27331904
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||||||| |||||||||||    
T  27331860 atctaaaatgttgatttttgcttataatagtgaccggaggatgta 27331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 351
Target Start/End: Complemental strand, 40204467 - 40204435
Alignment:
Q  319 gatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||||||||||||||||||||||||||    
T  40204467 gatttttgcttataatagtgatcggaggatgta 40204435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 31101997 - 31102036
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  31101997 ttaatgatatatatgatctttattataaaccacatacatc 31102036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 348
Target Start/End: Complemental strand, 7079398 - 7079368
Alignment:
Q  318 tgatttttgcttataatagtgatcggaggat 348  Q
    |||||||||||||||||||||||||||||||    
T  7079398 tgatttttgcttataatagtgatcggaggat 7079368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 15859643 - 15859605
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacat 308  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  15859643 ttaatgatgtatatgatatttattatagacaacatacat 15859605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 1961335 - 1961303
Alignment:
Q  320 atttttgcttataatagtgatcggaggatgtaa 352  Q
    ||||||||||||||||||||||||||| |||||    
T  1961335 atttttgcttataatagtgatcggagggtgtaa 1961303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 354
Target Start/End: Complemental strand, 2050114 - 2050082
Alignment:
Q  322 ttttgcttataatagtgatcggaggatgtaaat 354  Q
    ||||||||||||||||||||||| |||||||||    
T  2050114 ttttgcttataatagtgatcggatgatgtaaat 2050082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 21183428 - 21183472
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||| ||||| |||||||||||    
T  21183428 atctaaaatgttgatttttgcttataacagtgaccggaggatgta 21183472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 31024210 - 31024166
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||||||| || ||||||||    
T  31024210 atctaaaatgttgatttttgcttataatagtgaccgtaggatgta 31024166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 38465828 - 38465784
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||    
T  38465828 atctaaaatgttgatttttgcttataatagtgaccggagggtgta 38465784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 40874335 - 40874367
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtga 339  Q
    ||||||||| |||||||||||||||||||||||    
T  40874335 atctaaaatagtgatttttgcttataatagtga 40874367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 42263108 - 42263068
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  42263108 tttaatgatgtatatgatctatattatgaaccacatacatc 42263068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 10117062 - 10117023
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  10117062 ttaatgatgtatatgatatttattatagaccacatacatc 10117023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 32016821 - 32016861
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  32016821 tttaatgatgtatatgatacatattataaaccacatacatc 32016861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 3225828 - 3225867
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  3225828 ttaatgatgtatatgatctttattatagaccacatacatc 3225867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 34580664 - 34580626
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacat 308  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  34580664 ttaatgatgtatatggtctttattataaaccacatacat 34580626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 10934704 - 10934748
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||    
T  10934704 atctaaaatgttgatttttgcttataatagtgaccggagggtgta 10934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 39235227 - 39235190
Alignment:
Q  272 aatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  39235227 aatgatgtatatgatctttattataaaccacatacatc 39235190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 10572813 - 10572774
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  10572813 ttaatgatgtatatgatctttattatagaccacatacatc 10572774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 18626799 - 18626760
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  18626799 ttaatgatgcatatgatctttattataaaccacatacatc 18626760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 309
Target Start/End: Complemental strand, 41654591 - 41654553
Alignment:
Q  271 taatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  41654591 taatgatgtatatgatatttattatagaccatatacatc 41654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 351
Target Start/End: Original strand, 6975045 - 6975078
Alignment:
Q  318 tgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||||||||||||||| |||||||||||    
T  6975045 tgatttttgcttataatagtgaccggaggatgta 6975078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 351
Target Start/End: Complemental strand, 16537288 - 16537259
Alignment:
Q  322 ttttgcttataatagtgatcggaggatgta 351  Q
    ||||||||||||||||||||||||||||||    
T  16537288 ttttgcttataatagtgatcggaggatgta 16537259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 2582847 - 2582803
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||| ||||||||| |||||    
T  2582847 atctaaaatattgatttttgcttataataatgatcggagaatgta 2582803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 351
Target Start/End: Complemental strand, 14450984 - 14450952
Alignment:
Q  319 gatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||||||||||||||||||||| ||||    
T  14450984 gatttttgcttataatagtgatcggagggtgta 14450952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 351
Target Start/End: Original strand, 19934751 - 19934783
Alignment:
Q  319 gatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||||||||||||||||||||| ||||    
T  19934751 gatttttgcttataatagtgatcggagggtgta 19934783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 38298138 - 38298174
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatac 306  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38298138 ttaatgatgtatatggtctttattataaaccacatac 38298174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 42911708 - 42911668
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||||||||| | | ||||||||||||||||||||    
T  42911708 tttaatgatgtatatggtgtatattataaaccacatacatc 42911668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 55936026 - 55935983
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||| || ||||||||||||||||||| |||||||||||    
T  55936026 atctaaaattatg-tttttgcttataatagtgaccggaggatgta 55935983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 26527229 - 26527185
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||    
T  26527229 atctaaaatgttgatttttgcttataatagtgatcggagggtgta 26527185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 8449677 - 8449722
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgtaa 352  Q
    |||||||||  | |||||||||||||||||||| ||||||||||||    
T  8449677 atctaaaatattaatttttgcttataatagtgaccggaggatgtaa 8449722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 8458481 - 8458526
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgtaa 352  Q
    |||||||||  | |||||||||||||||||||| ||||||||||||    
T  8458481 atctaaaatattaatttttgcttataatagtgaccggaggatgtaa 8458526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 10731520 - 10731560
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||| |||| | ||||||||||||||||||||    
T  10731520 tttaatgatgtatgtgatctatattataaaccacatacatc 10731560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 12104773 - 12104737
Alignment:
Q  318 tgatttttgcttataatagtgatcggaggatgtaaat 354  Q
    |||||||||||||||||||||| |||| |||||||||    
T  12104773 tgatttttgcttataatagtgaccggaagatgtaaat 12104737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 346
Target Start/End: Original strand, 16121077 - 16121105
Alignment:
Q  318 tgatttttgcttataatagtgatcggagg 346  Q
    |||||||||||||||||||||||||||||    
T  16121077 tgatttttgcttataatagtgatcggagg 16121105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 350
Target Start/End: Original strand, 33689340 - 33689372
Alignment:
Q  318 tgatttttgcttataatagtgatcggaggatgt 350  Q
    |||||||||||| ||||||||||||||||||||    
T  33689340 tgatttttgcttttaatagtgatcggaggatgt 33689372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000009; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 21586906 - 21586867
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  21586906 ttaatgatgtatatgatctttattatagaccacatacatc 21586867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Complemental strand, 24280913 - 24280875
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacat 308  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  24280913 ttaatgatgtatataatatttattatagaccacatacat 24280875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 351
Target Start/End: Complemental strand, 28229012 - 28228983
Alignment:
Q  322 ttttgcttataatagtgatcggaggatgta 351  Q
    ||||||||||||||||||||||||||||||    
T  28229012 ttttgcttataatagtgatcggaggatgta 28228983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 24936728 - 24936768
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||||| ||| ||||| |||||||||||||    
T  24936728 tttaatgatgtatatgacattaattatgaaccacatacatc 24936768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 25245244 - 25245288
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||    
T  25245244 atctaaaatgttgatttttgcttataatagtgaccggagggtgta 25245288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 41404054 - 41404010
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  | |||||||||||||||||||| |||||||||||    
T  41404054 atctaaaatgataatttttgcttataatagtgaccggaggatgta 41404010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000009; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 19810938 - 19810977
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  19810938 ttaatgatgtatatggtctttattataaaccacatacatc 19810977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 37807602 - 37807563
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  37807602 ttaatgatgtatatggtctttattataaaccacatacatc 37807563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 321 - 352
Target Start/End: Complemental strand, 51253910 - 51253879
Alignment:
Q  321 tttttgcttataatagtgatcggaggatgtaa 352  Q
    ||||||||||||||||||||||||||||||||    
T  51253910 tttttgcttataatagtgatcggaggatgtaa 51253879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 14756445 - 14756495
Alignment:
Q  259 gatttattgttttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    ||||||||  |||||||||||||||| | ||||||||| ||||||||||||    
T  14756445 gatttattcatttaatgatgtatatggtctttattatagaccacatacatc 14756495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 37897730 - 37897768
Alignment:
Q  270 ttaatgatgtatatgatatttattataaaccacatacat 308  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  37897730 ttaatgatgtatatgatctttattatagaccacatacat 37897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 351
Target Start/End: Original strand, 51253918 - 51253948
Alignment:
Q  321 tttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||||||||||||||||||||||||    
T  51253918 tttttgcttataatagtgatcggaggatgta 51253948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 351
Target Start/End: Complemental strand, 331827 - 331794
Alignment:
Q  318 tgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||||||||||||||| |||||||||||    
T  331827 tgatttttgcttataatagtgaccggaggatgta 331794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 351
Target Start/End: Original strand, 24694340 - 24694373
Alignment:
Q  318 tgatttttgcttataatagtgatcggaggatgta 351  Q
    ||||||||| ||||||||||||||||||||||||    
T  24694340 tgatttttgtttataatagtgatcggaggatgta 24694373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 41254021 - 41253984
Alignment:
Q  272 aatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||| | |||||||||||||||||||||||||    
T  41254021 aatgatgtatgtaatatttattataaaccacatacatc 41253984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 7823968 - 7824012
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  | ||||| ||||||||||||||||||||||||||    
T  7823968 atctaaaatgttaattttagcttataatagtgatcggaggatgta 7824012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 8504877 - 8504837
Alignment:
Q  319 gatttttgcttataatagtgatcggaggatgtaaatcttaa 359  Q
    ||||||||||||||||||||| |||||| ||||||| ||||    
T  8504877 gatttttgcttataatagtgaccggagggtgtaaattttaa 8504837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 41254032 - 41254076
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||    
T  41254032 atctaaaatgttgatttttgcttataataatgatcggagggtgta 41254076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 52215906 - 52215874
Alignment:
Q  320 atttttgcttataatagtgatcggaggatgtaa 352  Q
    |||||||||||||||||||| ||||||||||||    
T  52215906 atttttgcttataatagtgaccggaggatgtaa 52215874  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 52215931 - 52215967
Alignment:
Q  273 atgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  52215931 atgatgtatatgatctttattatagaccacatacatc 52215967  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 351
Target Start/End: Original strand, 52215981 - 52216025
Alignment:
Q  307 atctaaaattgtgatttttgcttataatagtgatcggaggatgta 351  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||    
T  52215981 atctaaaatgttgatttttgcttataatagtgaccggagggtgta 52216025  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 491943 - 491903
Alignment:
Q  269 tttaatgatgtatatgatatttattataaaccacatacatc 309  Q
    |||||||||||||||||| | |||||| |||||||||||||    
T  491943 tttaatgatgtatatgatctatattatgaaccacatacatc 491903  T

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