View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18770_high_5 (Length: 234)
Name: NF18770_high_5
Description: NF18770
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18770_high_5 |
 | |
|
| [»] scaffold0764 (1 HSPs) |
| | |
|
| [»] scaffold0313 (2 HSPs) |
| | |
|
| [»] scaffold0535 (1 HSPs) |
| | |
|
| [»] scaffold0811 (1 HSPs) |
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| [»] scaffold0262 (1 HSPs) |
| | |
|
| [»] scaffold0059 (1 HSPs) |
| | |
|
| [»] scaffold0004 (1 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
| | |
|
| [»] scaffold0142 (1 HSPs) |
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| [»] scaffold0072 (1 HSPs) |
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| [»] scaffold0057 (1 HSPs) |
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| [»] scaffold0015 (1 HSPs) |
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| [»] scaffold0406 (1 HSPs) |
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| [»] scaffold0277 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 31824561 - 31824364
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31824561 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
31824462 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31824461 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
31824364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 5615725 - 5615922
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5615725 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
5615824 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
5615825 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttcttggctttcat |
5615922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 13286014 - 13286208
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13286014 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
13286113 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggcttt |
214 |
Q |
| |
|
|| || |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13286114 |
gtattgaatgaacattgaagatgccccttttgactttaatcaaataaatgcctttattccttgattgatcttagtcatgtacttttctgggcttt |
13286208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 41027383 - 41027188
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
41027383 |
aatcctaatagtgaaatatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
41027284 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|| || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
41027283 |
gttttgaatgaacattgaagatgccccttttgactttaatcaaataaatgtctttattccttgattgatcttagtcaatgtactttactgggcttt |
41027188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 12827588 - 12827783
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12827588 |
aatcctaatagtgaaacattgatgaagtgcaacatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
12827687 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||||||| || |||||| |
|
|
| T |
12827688 |
gtcttgaatgaacattgaagatgccctttttgactttaatcaaataaatgcatttattgcttgattgatcttattcaatgtactttactaggcttt |
12827783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 15988898 - 15989093
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
15988898 |
aatcctaatagtgaaacattgatgaagtgcagcatggaaaacatctaggatgatattcttgatggaatattcctaatgttttgtacttcaaatattcata |
15988997 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || |||||| ||||||||| |
|
|
| T |
15988998 |
gtcttgaatgaatattgaagatgccccttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatatactttactgggcttt |
15989093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 42595196 - 42595001
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||| |
|
|
| T |
42595196 |
aatcctaatagtgaaacatttatgaagtgcagtatggaaaacatctaggatgatattcttaatggaatattcttaattttttgtacttcaaatgttcata |
42595097 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||| ||||||||| |
|
|
| T |
42595096 |
gtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgactgatcttagtcaatgcactttactgggcttt |
42595001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 25441927 - 25441775
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25441927 |
aatcctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatgatattcttaatggaatattcctaatgtcttgtacttcaattgttcata |
25441828 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgctt |
172 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25441827 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgctt |
25441775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 40701766 - 40701581
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||| |||||||| |||||||||| || | ||||||||| ||||||||||| |||||||||||||||| ||||| |||||| | ||||||| |
|
|
| T |
40701766 |
aatcctaataatgaaacatcattgaagtgcagtgtgtataacatctagaatgatattcttgatggaatattcctaatattttgcacttcattcgttcata |
40701667 |
T |
|
| Q |
120 |
g-tcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttt |
204 |
Q |
| |
|
|||| |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
40701666 |
aatcttgaatgaacactgaagatgtc-tttttgactttaatcaaataaatgcttttattccttgattgatctaagtcaatgtacttt |
40701581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 33091033 - 33090908
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttca-t |
118 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||| | |
|
|
| T |
33091033 |
aatcctaatagtgaaacattgatgaagtgcagtatatgtaacatctaggatgatattcttgatagaatatttataatgttttgtacttcaaatgttcatt |
33090934 |
T |
|
| Q |
119 |
agtcttaaatgaacattgaagatgcc |
144 |
Q |
| |
|
||||||||||||||| | |||||||| |
|
|
| T |
33090933 |
agtcttaaatgaacaataaagatgcc |
33090908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 189
Target Start/End: Complemental strand, 9006707 - 9006586
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaa |
158 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||| ||||||||||||| || |||||||||| |||| |
|
|
| T |
9006707 |
aacatctaggatgatattctctttggaatatttcta-------gtatttcaagtgttcatagtcttgaatgaacattgaatat--cctttttgacattaa |
9006617 |
T |
|
| Q |
159 |
tcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
|| ||||| | |||||| ||||||||||| |
|
|
| T |
9006616 |
tcttgtaaatacctttattgcttgattgatc |
9006586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 14437214 - 14437017
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14437214 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttgatggaatattcctaatgttttgtacttcaattgttcata |
14437115 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14437114 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattctttgattgatcttagtcatgtacttttctgggctttcat |
14437017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 26362589 - 26362786
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26362589 |
aatcctaatagtgaagcatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
26362688 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
26362689 |
gtcttaaatgaacattgaagatgccctttttgactttaataaaataaatgctcttattctttgatttatcttagtcttgtacttttctgggctttcat |
26362786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 12841730 - 12841919
Alignment:
| Q |
23 |
cctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtc |
122 |
Q |
| |
|
||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
12841730 |
cctaatagtgaaacattgatgaagtgcagtatatgtaacatctagcatgatatccttgatggaatattcctaatgttttgtacttcaaatgttcatagtc |
12841829 |
T |
|
| Q |
123 |
ttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggc |
211 |
Q |
| |
|
|| || ||||||| |||||||||||| ||| |||||| |||||||| |||||| |||||||||||| |||| ||||||||| |||||| |
|
|
| T |
12841830 |
ttgaaggaacattcaagatgccctttatgaacttaatctaataaatgtctttatttcttgattgatctaagtcaatgtactttactgggc |
12841919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 18536428 - 18536262
Alignment:
| Q |
24 |
ctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-agtc |
122 |
Q |
| |
|
||||||||||||||| |||||||||| ||| | || |||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||| |||| |
|
|
| T |
18536428 |
ctaatagtgaaacatcaatgaagtgcactatgtataagatctaggatgatattcttgatggaatattcataatattttgtacttcaattgttcataagtc |
18536329 |
T |
|
| Q |
123 |
ttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatct |
190 |
Q |
| |
|
|| ||||| ||||||||||| ||||||| |||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
18536328 |
ttgaatgatcattgaagatg-cctttttaactttaatcaaataaatgtgtttattctttgattgatct |
18536262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 37295678 - 37295552
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaa |
158 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| | ||||||| ||| |
|
|
| T |
37295678 |
aacatctaggatgatattcttaatgaaatattcctaatgttttgtacttcaaatgtccatagtcttgaatgaacattgaagatgtcatttttgaacttac |
37295579 |
T |
|
| Q |
159 |
tcaaataaatgcttttattccttgatt |
185 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
37295578 |
tcaaataaatgcatttattccttgatt |
37295552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 5867653 - 5867770
Alignment:
| Q |
63 |
tctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaa |
162 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5867653 |
tctaggatgatattcttattggaatattccta-------gtacttcaaatgttcatagtcttaaatgaacattgaagat--cctttttgactttaatcct |
5867743 |
T |
|
| Q |
163 |
ataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
| |||||| |||||||||||||||||| |
|
|
| T |
5867744 |
aaaaatgcctttattccttgattgatc |
5867770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 20098559 - 20098494
Alignment:
| Q |
122 |
cttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
20098559 |
cttaaatgaacattgaatat--cttttttgacattaatcttgtaaatgcttttattgcttgattgatc |
20098494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 522447 - 522644
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
522447 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
522546 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
522547 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcat |
522644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 17421553 - 17421748
Alignment:
| Q |
22 |
tcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagt |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
17421553 |
tcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcatagt |
17421652 |
T |
|
| Q |
122 |
cttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17421653 |
cttgaatgaacattgaagatgtcctttttgactttaatcaaataaatggttttattccttgattgatcttagtcatgtacttttctaggctttcat |
17421748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 26458185 - 26457993
Alignment:
| Q |
22 |
tcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagt |
121 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
26458185 |
tcctaatagtgaaacatttatgaagtgctgcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcatagt |
26458086 |
T |
|
| Q |
122 |
cttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggcttt |
214 |
Q |
| |
|
||| ||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||| |
|
|
| T |
26458085 |
cttggatgaacattgaagatgctctttttaaatttaatcaaataaatgcctttattccttaattgatcttagtcatgtacttttatgagcttt |
26457993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 30651396 - 30651208
Alignment:
| Q |
24 |
ctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtct |
123 |
Q |
| |
|
||||||| | |||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||| |
|
|
| T |
30651396 |
ctaatagaggaacattgatgaagtgcagcatggaaaacatctaggatgatattcttaatggaat---cccaatgttttgtacttcaaatgttcatagtct |
30651300 |
T |
|
| Q |
124 |
taaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
30651299 |
tgaatgaacattgaagatgccctttttgactttaatcaaataaatgcgtttattccttgattgatcttagtcaatgtactttactgggcttt |
30651208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 16058083 - 16057872
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
16058083 |
aatcctaatagtggaacattgatgaaaaacagcatggaaaacatctaggatgatattcttaatggaatattcccaatattttgtacttcaaatgttcata |
16057984 |
T |
|
| Q |
120 |
gtcttaaatgaacat----------------tgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtact |
202 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| |
|
|
| T |
16057983 |
gtcttgaatgaacatagtcttgaatgaacattgaagatgccctttttgactttaatcaaataaatgcctttattccttgattgatcctagtcaatgtact |
16057884 |
T |
|
| Q |
203 |
tttctgggcttt |
214 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
16057883 |
ttactgggcttt |
16057872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 41525698 - 41525532
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat- |
118 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||| | ||||| || ||||||||||||| |||||||||||||| |||||| ||||||||||||| |
|
|
| T |
41525698 |
aatcctaatagtaaaacataaatgaagtgcatcatgtataacatttaagatgatattcttataggaatattcctaat-atttgtaattcaattgttcata |
41525600 |
T |
|
| Q |
119 |
agtcttaaatgaacattgaagatgccctttttgactttaat-caaataaatgcttttattccttgattgat |
188 |
Q |
| |
|
|||||| |||| ||| |||| |||| |||||||||| || |||||||||| |||| |||||||||||| |
|
|
| T |
41525599 |
agtctttaatgtacaatgaatatgc---ttttgacttttatccaaataaatgtctttaatccttgattgat |
41525532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 13403340 - 13403375
Alignment:
| Q |
102 |
gtacttcaattgttcatagtcttaaatgaacattgaa |
138 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13403340 |
gtacttcaat-gttcatagtcttaaatgaacattgaa |
13403375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 190; Significance: 1e-103; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 1974934 - 1975131
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1974934 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
1975033 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1975034 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcat |
1975131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 1982300 - 1982497
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1982300 |
aatcctaatagtgaagcatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
1982399 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1982400 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
1982497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 1989718 - 1989915
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1989718 |
aatcctaatagtgaagcatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
1989817 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1989818 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
1989915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 41208368 - 41208173
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
41208368 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
41208269 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
41208268 |
gtcttgaatgaacattgaagatgccctttttgactttaattaaataaatgcctttatttcttgattgatcttagtcaatgtactttactgggcttt |
41208173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 52955522 - 52955689
Alignment:
| Q |
24 |
ctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtct |
123 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
52955522 |
ctaatagtgaaacatttatgaagtgcagcgtggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatattcatagtct |
52955621 |
T |
|
| Q |
124 |
taaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatctta |
192 |
Q |
| |
|
| |||||||||| || || |||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
52955622 |
tgaatgaacattaaatataccctttttgactttaatcaaataaatgcctttatt-cttgattgatctta |
52955689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 13403943 - 13404065
Alignment:
| Q |
68 |
gatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaagatgccctttttgactttaat-caaata |
165 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||| || || |||||||||| || |||||| |
|
|
| T |
13403943 |
gatgatattcttataggagtattcctaatgttttgtacttcaattgttcataagtctttaatgaacaatgaatattcc--ttttgacttttatccaaata |
13404040 |
T |
|
| Q |
166 |
aatgcttttattccttgattgatct |
190 |
Q |
| |
|
||||| |||| |||||||||||||| |
|
|
| T |
13404041 |
aatgcctttaatccttgattgatct |
13404065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 19868880 - 19869008
Alignment:
| Q |
62 |
atctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaagatgccctttttgactttaat- |
159 |
Q |
| |
|
||||||||||||||||||| |||||||||||| || |||||| |||| |||||||| |||||| |||||||| |||| ||| ||||||||||| || |
|
|
| T |
19868880 |
atctaggatgatattcttagaggaatattcctattg-tttgtaattcatttgttcataagtctttaatgaacaatgaatatg-tttttttgacttttatc |
19868977 |
T |
|
| Q |
160 |
caaataaatgcttttattccttgattgatct |
190 |
Q |
| |
|
||||||| || |||| |||||||||||||| |
|
|
| T |
19868978 |
caaataagtgtctttaatccttgattgatct |
19869008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 34822791 - 34822706
Alignment:
| Q |
102 |
gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||||||| | |||||||| |||||| ||||| | |||||| ||||||||||| |
|
|
| T |
34822791 |
gtacttcaaatgttcatagtcttaaatgaacaatgaagat--cttttttgacattaatcttgtaaattcctttattgcttgattgatc |
34822706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 189
Target Start/End: Complemental strand, 30210597 - 30210492
Alignment:
| Q |
83 |
ggaatattcctaatgttttgtacttcaattgttcata-gtcttaaatgaacattgaagatgccctttttgactttaatc-aaataaatgcttttattcct |
180 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||| || ||||| |||||||| |||| |||| |||||||||| ||| ||||||||| |||| |||| |
|
|
| T |
30210597 |
ggaatattcctaatgttt-gtacttcatttgttcgtaagtctttaatgaacaatgaatatgca--ttttgacttttatccaaataaatgtctttaatcct |
30210501 |
T |
|
| Q |
181 |
tgattgatc |
189 |
Q |
| |
|
||||||||| |
|
|
| T |
30210500 |
tgattgatc |
30210492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 18062516 - 18062600
Alignment:
| Q |
102 |
gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||||||||| |||| | ||||||| |||||| ||| ||||||| |
|
|
| T |
18062516 |
gtacttcaat-gttcatagtcttaaatgaacattgaatat--cctttttgacattaaccttataaatgtctttattgcttcattgatc |
18062600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 22956357 - 22956292
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaac |
132 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||| |
|
|
| T |
22956357 |
aacatctaggatgatattcttattggaatattc-------ttagtacttcaa-tgttcatagtcttaaatgaac |
22956292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 138
Target Start/End: Original strand, 1186679 - 1186750
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaa |
138 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1186679 |
aacatctaggatgatattctctttggaatatttcta-------gtacttcaat-gttcatagtcttaaatgaacattgaa |
1186750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 21782455 - 21782371
Alignment:
| Q |
102 |
gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
||||||||| |||| |||||||| ||||||| ||||||| |||||||||| ||| || ||||||| |||||| ||||||||||| |
|
|
| T |
21782455 |
gtacttcaagtgtttatagtcttgaatgaaccttgaaga---cctttttgacattattcttgtaaatgcctttattgcttgattgatc |
21782371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 25019309 - 25019198
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattct-taatggaatattcctaatgttttgtacttcaattgttcat |
118 |
Q |
| |
|
|||||||||||||||||| | |||||| |||| || ||||||||||||||||||| | || |||||||||| |||||||||| |||||| |
|
|
| T |
25019309 |
aatcctaatagtgaaacaatgatgaagagcagtgataataacatctaggatgatattcccttgtgaaatattccta-------gtacttcaat-gttcat |
25019218 |
T |
|
| Q |
119 |
agtcttaaatgaacattgaa |
138 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
25019217 |
agtcttaaatgaacattgaa |
25019198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0764 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0764
Description:
Target: scaffold0764; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 1029 - 1226
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1029 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
1128 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1129 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcat |
1226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 5580 - 5383
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5580 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
5481 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5480 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcat |
5383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 19737 - 19540
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19737 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
19638 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
19637 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcat |
19540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 34765168 - 34764971
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34765168 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
34765069 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
34765068 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgtttttattccttgattgatctcagtcatgtacttttctgggctttcat |
34764971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 24370554 - 24370744
Alignment:
| Q |
24 |
ctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtct |
123 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
24370554 |
ctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcatagtct |
24370653 |
T |
|
| Q |
124 |
taaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggcttt |
214 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24370654 |
tgaatgaacattgaagatgccctttttgactttaatcaaataaatgtctttattccttgattgatcttagtcatgtacttttctgggcttt |
24370744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 8563470 - 8563665
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8563470 |
aatcctaatattgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
8563569 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
8563570 |
gtctagaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtactttactgggcttt |
8563665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 22223820 - 22224015
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
22223820 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaattttttgtacttcaaatgttcata |
22223919 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
22223920 |
gtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttaattgatcttagtcaatgtactttactgggcttt |
22224015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 22249655 - 22249850
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
22249655 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaattttttgtacttcaaatgttcata |
22249754 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
22249755 |
gtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttaattgatcttagtcaatgtactttactgggcttt |
22249850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 9761675 - 9761817
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat- |
118 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||||| || | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9761675 |
aatcttaacagtaaaacatcaatgaagtgcagtgtgtataacatctaggatgatattcttagaggaatattcctaatgttttgtacttcaattgttcata |
9761774 |
T |
|
| Q |
119 |
agtcttaaatgaacattgaagatgccctttttgactttaatcaaa |
163 |
Q |
| |
|
|||||| |||||||| |||| ||||| |||||||||| |||||| |
|
|
| T |
9761775 |
agtctttaatgaacaatgaatatgcc--ttttgacttttatcaaa |
9761817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 27787864 - 27787948
Alignment:
| Q |
102 |
gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| || |||||||||| |||| | ||||||| |||||| ||||||||||| |
|
|
| T |
27787864 |
gtacttcaat-gttcatagtcttaaatgaacattgaatat--cctttttgacattaaccttgtaaatgcctttattgcttgattgatc |
27787948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 24922220 - 24922277
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc |
77 |
Q |
| |
|
|||||||||||||||||| | |||||| |||| | || ||||||||||||||||||| |
|
|
| T |
24922220 |
aatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc |
24922277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 24931256 - 24931313
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc |
77 |
Q |
| |
|
|||||||||||||||||| | |||||| |||| | || ||||||||||||||||||| |
|
|
| T |
24931256 |
aatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc |
24931313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 27160161 - 27160358
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27160161 |
aatcctaatagtgaaacatctatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
27160260 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27160261 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcat |
27160358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 27170530 - 27170727
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27170530 |
aatcctaatagtgaaacatctatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
27170629 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27170630 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctgggctttcat |
27170727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 22901925 - 22901730
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22901925 |
aatcctaatagtgaaacatttatgaagtgcaacatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
22901826 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| ||| ||||| |
|
|
| T |
22901825 |
atcttaaatgaacattgaagatgccctttttgactttaatcaaataaattcatttattccttgattgatcttagtcaatgtactttactgagcttt |
22901730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 22909013 - 22909198
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
22909013 |
aatcctaataatgaaacatttatgaagtggagcatggaaaacatctaggatgatattcttaatggaatattcctaattttttatacttcaaatgttcata |
22909112 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttt |
204 |
Q |
| |
|
||||| ||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
22909113 |
gtcttgaatgaacattgaagatgccatttttgtctttaatcaaataaatgcctttattccttgattgatcttagtcaatgtacttt |
22909198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 19342087 - 19341939
Alignment:
| Q |
67 |
ggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataa |
166 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19342087 |
ggatgatattcttaatagaatattcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgacctttttgactttaatcaaataa |
19341988 |
T |
|
| Q |
167 |
atgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|||| ||||||||||||||||||| |||| ||||||||| ||||||||| |
|
|
| T |
19341987 |
atgcctttattccttgattgatctcagtcaatgtactttactgggcttt |
19341939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 23721752 - 23721565
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
23721752 |
aatcctaatagtgaaacatttatgaagtgcaacatggaaaatc-cta-------attattaatggaatattcctaatgttttgtacttcaaatgttcata |
23721661 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| |||||||||||||||||| | ||| ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| | ||||||| |
|
|
| T |
23721660 |
gtcttgaatgaacattgaagatgctcctttggactttagtcaaataaatgcctttattccttgattgatcttagtcaatgtactttacggggcttt |
23721565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 40409265 - 40409430
Alignment:
| Q |
24 |
ctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtct |
123 |
Q |
| |
|
||||||||||||||| |||||||| || ||| ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
40409265 |
ctaatagtgaaacatcaatgaagtgtagtatgtgtaacatctaggatgatattcttgatggaatattcctaatgtttcctacttgaattgttcatggtct |
40409364 |
T |
|
| Q |
124 |
taaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatct |
190 |
Q |
| |
|
| |||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
40409365 |
tgaatgaacattaaagatg-tctttttgactttaatcaaataaatggctttattccttgattgatct |
40409430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 15475617 - 15475711
Alignment:
| Q |
121 |
tcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|||| |||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
15475617 |
tcttgaatgaacattgaagatgctcattttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtacttttctggacttt |
15475711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 16135423 - 16135489
Alignment:
| Q |
83 |
ggaatattcctaatgttttgtacttcaattgttcata-gtcttaaatgaacattgaagatgcccttt |
148 |
Q |
| |
|
|||||||| | ||||| ||||||||||| |||| ||| || |||||||||||||||||||||||||| |
|
|
| T |
16135423 |
ggaatatttcaaatgtattgtacttcaaatgtttataagttttaaatgaacattgaagatgcccttt |
16135489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 72429 - 72465
Alignment:
| Q |
102 |
gtacttcaattgttcatagtcttaaatgaacattgaa |
138 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
72429 |
gtacttcaagtgttcataatcttaaatgaacattgaa |
72465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 20947632 - 20947435
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20947632 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
20947533 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
20947532 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctaggccttcat |
20947435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 20958021 - 20957824
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20958021 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
20957922 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |
|
|
| T |
20957921 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatctcagtcatgtacttttctaggccttcat |
20957824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 19548698 - 19548893
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19548698 |
aatcctaatagtgaaacatttatgaagtgcaacatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
19548797 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
19548798 |
gtcttaaatgaacattgaagatgccctttttgacttaaatcaaataaatgtctttattccttgattgatcttagtcaatatacttttctgggcttt |
19548893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 210
Target Start/End: Complemental strand, 36316201 - 36316010
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
36316201 |
aatcctaatagtggaacatcgatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattccaaatgttttgtacttcaaatgttcata |
36316102 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctggg |
210 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
36316101 |
gtcttgaatgaacattgaagatgccctttttgactttaatcaaataaatgtctttattccttgattgatcttagtcaatgtactttactggg |
36316010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 31105168 - 31105093
Alignment:
| Q |
112 |
tgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||| | |||||| |||||| |||||| ||||||||||| |
|
|
| T |
31105168 |
tgttcatagtcttaaatgaacattgaatat--cctttttggcattaatcttgtaaatgactttattgcttgattgatc |
31105093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 20 - 217
Target Start/End: Original strand, 49387603 - 49387800
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49387603 |
aatcctaatagtgaaacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
49387702 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggctttcat |
217 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
49387703 |
gtcttaaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgattgatcttagtcatgtacttttttgggctttcat |
49387800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 24873487 - 24873682
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24873487 |
aatcctaatagtgatacatttatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
24873586 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
24873587 |
gtcttaaatgaacattgaagatgtcctctttgacttttatcaaataaatgcctttattccttgattgatcttagtcaatgtactttactgggcttt |
24873682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 24793290 - 24793114
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
24793290 |
aatcctaatagtgaaacatttatgaagtgcagcatagaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
24793191 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtca |
196 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
24793190 |
gtcttgaatgaacattgaagatgtcctttttgactttaatcaaataaatgcctttattccttgattgatcttagtca |
24793114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 17733951 - 17733773
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
17733951 |
aatcataatagtgaaacatttatgaagtgtagcatggaaagcatctaggatcatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
17733852 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccct--ttttgactttaatcaaataaatgcttttattccttgattgatcttagtca |
196 |
Q |
| |
|
|||| ||| ||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
17733851 |
atcttgaataaacattgaagatgccctttttttgactttaaccaaataaatgtctttattccttgattgatcttagtca |
17733773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 19035220 - 19035042
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
19035220 |
aatcataatagtgaaacatttatgaagtgtagcatggaaagcatctaggatcatattcttaatggaatattcctaatgttttgtacttcaaatgttcata |
19035121 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccct--ttttgactttaatcaaataaatgcttttattccttgattgatcttagtca |
196 |
Q |
| |
|
|||| ||| ||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19035120 |
atcttgaataaacattgaagatgccctttttttgactttaaccaaataaatgtctttattccttgattgatcttagtca |
19035042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 59 - 214
Target Start/End: Original strand, 21542547 - 21542702
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttc-atagtcttaaatgaacattgaagatgccctttttgacttta |
157 |
Q |
| |
|
||||||||||||||||||| | || ||||||||||||| |||||||||| || ||||| | |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21542547 |
aacatctaggatgatattcatgatcgaatattcctaatattttgtactttaaatgttcaaaagtcttaaatgaacattgaagatgcc---tttgacttta |
21542643 |
T |
|
| Q |
158 |
at-caaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|| ||||||||||| |||||||||| |||||||| |||| |||||||||||| |||||| |
|
|
| T |
21542644 |
atccaaataaatgcctttattcctttattgatctaagtcaatgtacttttctaggcttt |
21542702 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 29709513 - 29709602
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttca |
109 |
Q |
| |
|
|||||||||||| |||| || |||||||||| ||| | |||||||||||||||||| | | ||||||||| ||||||||||||||||| |
|
|
| T |
29709513 |
aatcctaatagtaaaacgttaatgaagtgcaatatgtataacatctaggatgatattgtgagaggaatattcttaatgttttgtacttca |
29709602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 8435868 - 8435918
Alignment:
| Q |
60 |
acatctaggatgatattcttaatggaatattcctaatgttttgtacttcaa |
110 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
8435868 |
acatctaggatgatattcttagaggaatattcctaatgtattgtacttcaa |
8435918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 8439413 - 8439463
Alignment:
| Q |
60 |
acatctaggatgatattcttaatggaatattcctaatgttttgtacttcaa |
110 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
8439413 |
acatctaggatgatattcttataggaatattcctaatgtattgtacttcaa |
8439463 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 11044673 - 11044751
Alignment:
| Q |
41 |
atgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||||||| || ||| | |||||||||||||||| ||||| ||||||| |||||||||| || |||||||||||||| |
|
|
| T |
11044673 |
atgaagtgtagtatgcataacatctaggatgatactcttagaagaatatttctaatgttttatatttcaattgttcata |
11044751 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 6422143 - 6422086
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc |
77 |
Q |
| |
|
|||||||||||||||||| | |||||| |||| | || ||||||||||||||||||| |
|
|
| T |
6422143 |
aatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc |
6422086 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0535 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0535
Description:
Target: scaffold0535; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 1154 - 1344
Alignment:
| Q |
25 |
taatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtctt |
124 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
1154 |
taatagtgaaacattgatgaagtgcagcatggaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaaatgttcatagtcat |
1253 |
T |
|
| Q |
125 |
aaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||| |
|
|
| T |
1254 |
gaatgaacattgaagatgccctttttgactttaatcaaataaatgcctttattccttgatttatcttagtcaatgtactttactgggcttt |
1344 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0811 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0811
Description:
Target: scaffold0811; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 214
Target Start/End: Original strand, 3760 - 3955
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcata |
119 |
Q |
| |
|
|||| ||||||||||||| | |||||||||| |||| ||||||||||||||||||||||| || |||| |||||||||||||||||||||| | |||||| |
|
|
| T |
3760 |
aatcgtaatagtgaaacaatgatgaagtgcatcatggaaaacatctaggatgatattcttgatcgaatgttcctaatgttttgtacttcaaatattcata |
3859 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| ||||| |
|
|
| T |
3860 |
gtcttgaatgaatattgaagatgccctttttgactttaatcaaataaatgcctttattccttgattgatcttagtcaatgtactttactgagcttt |
3955 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 1399 - 1242
Alignment:
| Q |
57 |
aaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgacttt |
156 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
1399 |
aaaacatctaggatgatattcttgatggaatattcctaatgttttgtacttcaaatgttcatagtcttgaatgaacattgaagatgccctttttgacttg |
1300 |
T |
|
| Q |
157 |
aatcaaataaatgcttttattccttgattgatcttagtcatgtacttttctgggcttt |
214 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||||| |
|
|
| T |
1299 |
aatcaaataaatgtctttattcactgattgatcttagttatgtacttttctgcgcttt |
1242 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 41 - 214
Target Start/End: Original strand, 40842 - 41016
Alignment:
| Q |
41 |
atgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaaga |
140 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| | |||| | || |||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
40842 |
atgaagtgcaatatgaaaaacatctaggatgatattcttaatgaactattgcgaaggttttgtacttcaaatgttcatagtcttgaatgaacattgaaga |
40941 |
T |
|
| Q |
141 |
tgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtc-atgtacttttctgggcttt |
214 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| |
|
|
| T |
40942 |
tgccttttttgactttaatcaaataaatgcttttattccttgattgctcttagtcaatgtactttattgggcttt |
41016 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 241913 - 242089
Alignment:
| Q |
21 |
atcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-a |
119 |
Q |
| |
|
||||||||||| | |||| |||||||| || || | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| | |
|
|
| T |
241913 |
atcctaatagtaatacatcaatgaagtgtagtgtgtataacatctaggatgatattcttagagaaatattcctaatgttttgtacttcaattgttcataa |
242012 |
T |
|
| Q |
120 |
gtcttaaatgaacattgaagatgccctttttgactttaat-caaataaatgcttttattccttgattgatcttagtcat |
197 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||||| || |||||||||| |||| |||||||| |||| |||||| |
|
|
| T |
242013 |
gtcttaaatgaacattgaatatgcc--ttttcacttttatccaaataaatgtgtttaaaccttgattaatctaagtcat |
242089 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 267239 - 267322
Alignment:
| Q |
112 |
tgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatcttagtca |
196 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
267239 |
tgttcatagtcttta-tgaacattgaagatgccctttttgactttaatcaaataaatacctttattccttgattgatcttagtca |
267322 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0142 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0142
Description:
Target: scaffold0142; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 29027 - 29145
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaa |
158 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| ||| ||| |||||| |||||||||||||||||||||||||| || |||||||||| |||| |
|
|
| T |
29027 |
aacatctaggatgatattctcattggaatattgcta-------gtatttcaat-gttcatagtcttaaatgaacattgaatat--cctttttgacattaa |
29116 |
T |
|
| Q |
159 |
tcaaataaatgcttttattccttgattga |
187 |
Q |
| |
|
| ||||||| |||||| ||||||||| |
|
|
| T |
29117 |
ccttgtaaatgcatttattgcttgattga |
29145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0072 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0072
Description:
Target: scaffold0072; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 28630 - 28727
Alignment:
| Q |
41 |
atgaagtgcagcatgaaaaacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcat-agtcttaaatgaacattgaa |
138 |
Q |
| |
|
|||||||||| |||| | ||||||||| |||| |||||| |||||||||||||| ||||||||||| |||||||| |||||| |||||||| |||| |
|
|
| T |
28630 |
atgaagtgcaacatgtataacatctagaatgaaattctttgatgaatattcctaatg-tttgtacttcatttgttcataagtctttaatgaacaatgaa |
28727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0057 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0057
Description:
Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 65488 - 65370
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaa |
158 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||| ||||||||| ||||||||||||| |||||||| ||||||| | |||||||| |||| |
|
|
| T |
65488 |
aacatctaggatgatattcttgttcgaatattccta-------gtacttcaaatgttcatagtcttgaatgaacactgaagat--cttttttgacattaa |
65398 |
T |
|
| Q |
159 |
tcaaataaatgcttttattccttgattg |
186 |
Q |
| |
|
|| |||||| |||||| |||||||| |
|
|
| T |
65397 |
tcttgtaaatgtatttattgcttgattg |
65370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 198959 - 199024
Alignment:
| Q |
59 |
aacatctaggatgatattcttaatggaatattcctaatgttttgtacttcaattgttcatagtcttaaatgaac |
132 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||| |
|
|
| T |
198959 |
aacatctaggatgatattcttattggaatattcata-------gtacttcaa-tgttcatagtcttaaatgaac |
199024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0406 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0406
Description:
Target: scaffold0406; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 15146 - 15062
Alignment:
| Q |
102 |
gtacttcaattgttcatagtcttaaatgaacattgaagatgccctttttgactttaatcaaataaatgcttttattccttgattgatc |
189 |
Q |
| |
|
||||||||| ||||||||||||| ||||||| |||||||| ||||||||| ||| || |||||| |||||| ||||||||||| |
|
|
| T |
15146 |
gtacttcaagtgttcatagtcttgaatgaaccttgaagat---ctttttgacattagtcttgtaaatgtctttatttcttgattgatc |
15062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 19603 - 19660
Alignment:
| Q |
20 |
aatcctaatagtgaaacatttatgaagtgcagcatgaaaaacatctaggatgatattc |
77 |
Q |
| |
|
|||||||||||||||||| | |||||| |||| | || ||||||||||||||||||| |
|
|
| T |
19603 |
aatcctaatagtgaaacaatgatgaagagcagtaataataacatctaggatgatattc |
19660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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