View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18772_high_18 (Length: 234)
Name: NF18772_high_18
Description: NF18772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18772_high_18 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 908223 - 908443
Alignment:
| Q |
14 |
gaagatgagttcaccttcaattttagcaattttgttccatgtagagctttaatataagaactctgaagaaattccatcgaatgttttctagcgtactttg |
113 |
Q |
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| T |
908223 |
gaagatgagttcaccttcaattttagcaattttgttccatgtagagctttaatataagaactctgaagaaattccatcgaaggttttctagcgtactttg |
908322 |
T |
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| Q |
114 |
taattgaacaaatgctttacatatgaatttgtttatttcttaaaaaataaattaaaactaaattggtttggaacatgtaaattcctgatcatttgattgg |
213 |
Q |
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| T |
908323 |
taattgaacaaatgctttacatttgaatttgtttatttcttaaaaaataaattaaaactaaattggtttggaacatgtaaattcctgatcatttgattgg |
908422 |
T |
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| Q |
214 |
tttatgtatataagatctaac |
234 |
Q |
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| T |
908423 |
tttatgtatataagatctaac |
908443 |
T |
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