View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18774_low_5 (Length: 443)
Name: NF18774_low_5
Description: NF18774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18774_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 417; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 3 - 423
Target Start/End: Complemental strand, 41860065 - 41859645
Alignment:
| Q |
3 |
tatcaaagattttaaacatggtggattagaaaaatatattatataaaaagggataagtaattgtctatatttagggaggaaattacttaccaagatgaaa |
102 |
Q |
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| T |
41860065 |
tatcaaagattttaaccatggtggattagaaaaatatattatataaaaagggataagtaattgtctatatttagggaggaaattacttaccaagatgaaa |
41859966 |
T |
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| Q |
103 |
acgttgagatctttatctgagatgttgactgcatcttgattctcatttctttggaactcaagcaagacatccaagaaatctcttgatttctcatcacgtt |
202 |
Q |
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| T |
41859965 |
acgttgagatctttatctgagatgttgactgcatcttgattctcatttctttggaactcaagcaagacatccaagaaatctcttgatttctcatcacgtt |
41859866 |
T |
|
| Q |
203 |
ccacttccaaatccaaacgctctttcacaaacgtggaagcaatttcaatagcttttcccatatccctgtccatttttctccttagaccttgtggatccaa |
302 |
Q |
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| T |
41859865 |
ccacttccaaatccaaacgctctttcacaaacgtggaagcaatttcaatagcttttcccatatccctgtccatttttctccttagaccttgtggatccaa |
41859766 |
T |
|
| Q |
303 |
ccaccttaaccatggaaacaaatccgacacattggcatgtccggtccattccaacaaccccataaccgcagtgaaaaactcggaaccactctcagatttc |
402 |
Q |
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| T |
41859765 |
ccaccttaaccatggaaacaaatccgacacattggcatgtccggtccattccaacaaccccataaccgcagtgaaaaactcggaaccactctcagatttc |
41859666 |
T |
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| Q |
403 |
atatcaaacatatcacgcgac |
423 |
Q |
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| T |
41859665 |
atatcaaacatatcacgcgac |
41859645 |
T |
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