View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18775_high_16 (Length: 315)
Name: NF18775_high_16
Description: NF18775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18775_high_16 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 13 - 293
Target Start/End: Original strand, 44144777 - 44145057
Alignment:
| Q |
13 |
gacatcatcaatgcaaagaaacgttactgctaaaaggaaaacaagacaaagttaaaaggctccggggattagtgtttcttgcagctggttttgtagcacc |
112 |
Q |
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| T |
44144777 |
gacatcatcagtgcaaagaaacgtaactgctaaaaggaaaacaagacaaagttaaaaggctccggggattagtgtttcttggagctggtttggtagcacc |
44144876 |
T |
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| Q |
113 |
accattctcctcatctgaaacacgagaaacatagatggcggtataagaacgctctataggataaattccagaagttccttgagatggttgagaggattac |
212 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44144877 |
accattctcctcatctgaaacacaagaaacatagatggcggtataagaacgctctataggataaattccagaagttccttgagatggttgagaggattac |
44144976 |
T |
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| Q |
213 |
tttcctcttatttgattgctagtagcctataaatcagctgtaatatacaaaaccaaatgtaccaagatctctgcagaactt |
293 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
44144977 |
tttcctcttatttgattgctaatagcctataaatcagctgtaatatacaaaaccaaatgtaccaagatctctgtagaactt |
44145057 |
T |
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