View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18775_low_23 (Length: 266)

Name: NF18775_low_23
Description: NF18775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18775_low_23
NF18775_low_23
[»] chr1 (4 HSPs)
chr1 (1-248)||(19225404-19225651)
chr1 (46-248)||(19219147-19219351)
chr1 (1-223)||(19221374-19221594)
chr1 (151-219)||(361895-361963)
[»] chr2 (7 HSPs)
chr2 (1-229)||(27589322-27589550)
chr2 (74-224)||(27595372-27595522)
chr2 (4-236)||(27716969-27717204)
chr2 (89-211)||(27724312-27724437)
chr2 (89-238)||(27735527-27735679)
chr2 (151-212)||(13281090-13281151)
chr2 (151-212)||(44937794-44937855)
[»] chr8 (8 HSPs)
chr8 (134-212)||(14681969-14682047)
chr8 (151-219)||(27230281-27230349)
chr8 (158-216)||(13024762-13024820)
chr8 (151-193)||(13472941-13472983)
chr8 (151-212)||(15338146-15338207)
chr8 (151-212)||(15427211-15427272)
chr8 (151-212)||(15518515-15518576)
chr8 (151-212)||(27183902-27183963)
[»] chr5 (6 HSPs)
chr5 (154-216)||(37408347-37408409)
chr5 (150-238)||(9764509-9764597)
chr5 (154-200)||(24655526-24655572)
chr5 (154-200)||(29416809-29416855)
chr5 (151-212)||(39724568-39724629)
chr5 (156-201)||(41996231-41996276)
[»] chr3 (1 HSPs)
chr3 (154-215)||(2703734-2703795)
[»] chr6 (3 HSPs)
chr6 (151-212)||(29300096-29300157)
chr6 (151-201)||(29124166-29124216)
chr6 (151-212)||(29012850-29012911)
[»] chr4 (1 HSPs)
chr4 (151-216)||(48741978-48742043)


Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19225651 - 19225404
Alignment:
Q  1 tcatttaacttgagcaatgaaattcctgttaccactctcatacccgtagatttgcatgatttaggatgggtcgatagacacttggaggtgttaaatgggc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19225651 tcatttaacttgagcaatgaaattcctgttaccactctcatacctgtagatttgcatgatttaggatgggtcaatagacacttggaggtgttaaatgggc 19225552  T
Q  101 atgttgctatgatctcaaattgtgtaaagaccacttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctctt 200  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19225551 atgtcgctatgatctcaaattgtgtaaagaccacttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctctt 19225452  T
Q  201 cgatgttggacccttatctgacatcaagcatcctatcgatcttatcgg 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19225451 cgatgttggacccttatctgacatcaagcatcctatcgatcttatcgg 19225404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 46 - 248
Target Start/End: Complemental strand, 19219351 - 19219147
Alignment:
Q  46 gtagatttgcatgatttaggatgggtcgatagacacttggaggtgttaaatggg--catgttgctatgatctcaaattgtgtaaagaccacttcgttcca 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||    
T  19219351 gtagatttgcatgatttaggatgggtcgatagacacttggaggtgttaaatgggggcatgttgctatgatctcaaattgtgtaaaaaccacttcgttcca 19219252  T
Q  144 catatcaatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacccttatctgacatcaagcatcctatcgatctt 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19219251 catatcaatatcaattttgggtgaactcggtgtcaaggaatcatggactaagctcttcgatgttggacccttatctgacatcaagcatcctatcgatctt 19219152  T
Q  244 atcgg 248  Q
    |||||    
T  19219151 atcgg 19219147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19221374 - 19221594
Alignment:
Q  1 tcatttaacttgagcaatgaaattcctgttaccactctcatacccgtagatttgcatgatttaggatgggtcgatagacacttggaggtgttaaatgggc 100  Q
    |||||||||||||||| ||||    || |||||||| || ||||| ||||||||||| ||||| ||||| | ||||||| ||||||  |||||||||| |    
T  19221374 tcatttaacttgagcactgaagg--ctattaccactttcttacccttagatttgcataatttaagatggatagatagacgcttggatctgttaaatggac 19221471  T
Q  101 atgttgctatgatctcaaattgtgtaaagaccacttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctctt 200  Q
    ||||| ||||||| ||||  | || ||     ||||| | ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  19221472 atgttactatgatatcaagctatgaaacccgtacttcttaccatatatcaatatcaattttgggtgagctcgatgtgaaggaatcatggactaagctctt 19221571  T
Q  201 cgatgttggacccttatctgaca 223  Q
     ||||||||||||||||| ||||    
T  19221572 tgatgttggacccttatccgaca 19221594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Original strand, 361895 - 361963
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacccttatct 219  Q
    ||||||||| | |||||  ||||||| |||||||||||||  |||||||||  ||||||||| ||||||    
T  361895 atatcaattcttggtgaaatcggtgtgaaggaatcatggataaagctcttcattgttggaccattatct 361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 2e-52; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 27589550 - 27589322
Alignment:
Q  1 tcatttaacttgagcaatgaaattcctgttaccactctcatacccgtagatttgcatgatttaggatgggtcgatagacacttggaggtgttaaatgggc 100  Q
    |||||||||||||||| |||| |  |||||||| ||||||| |||  ||| |||  | |||||  |||||| |||||| |||||| ||||||||||||||    
T  27589550 tcatttaacttgagcactgaagtgtctgttaccgctctcattccctcagaattgtttaatttaaaatgggttgatagagacttggcggtgttaaatgggc 27589451  T
Q  101 atgttgctatgatctcaaattgtgtaaagaccacttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctctt 200  Q
    ||||   |||||||||   || ||||||||||||||| |||||||||||||||||||| |||||||||| ||| ||||| |||||||||| |||||||||    
T  27589450 atgtaattatgatctcccgttatgtaaagaccacttctttccacatatcaatatcaatgttgggtgagcccggggtcaatgaatcatggattaagctctt 27589351  T
Q  201 cgatgttggacccttatctgacatcaagc 229  Q
    |||||||||||||||||||||||| ||||    
T  27589350 cgatgttggacccttatctgacattaagc 27589322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 74 - 224
Target Start/End: Complemental strand, 27595522 - 27595372
Alignment:
Q  74 atagacacttggaggtgttaaatgggcatgttgctatgatctcaaattgtgtaaagaccacttcgttccacatatcaatatcaattttgggtgagctcgg 173  Q
    ||||| |||||| ||||||||||||||||||   |||||||||   || ||| ||||||||||| |||||||||||||||||||| |||||||||| |||    
T  27595522 atagagacttggcggtgttaaatgggcatgtaattatgatctcccgttatgtgaagaccacttctttccacatatcaatatcaatgttgggtgagcccgg 27595423  T
Q  174 tgtcaaggaatcatggactaagctcttcgatgttggacccttatctgacat 224  Q
     ||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  27595422 ggtcaatgaatcatggattaagctcttcgatgttggacccttatctgacat 27595372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 236
Target Start/End: Complemental strand, 27717204 - 27716969
Alignment:
Q  4 tttaacttgagcaatgaaattcctgttaccactctcatacccgtagatttgcatgatttaggatgggtcgatagacacttggaggtgttaaatgggcatg 103  Q
    ||||| |||||||||||  | || |||||||||||| |||||   |||||||||||||||   |||||  ||||| ||||||  || ||||||| |||||    
T  27717204 tttaatttgagcaatgaggtaccagttaccactctcttaccctctgatttgcatgatttaaagtgggtttatagatacttggcagtcttaaatgagcatg 27717105  T
Q  104 ttgctatgatctcaaattgtgtaaagacca---cttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctctt 200  Q
    |||||||||||||||||| || |||||| |   |||| ||  ||| ||||||||| ||||||||||| |  ||||||||||||||||||| |||||||||    
T  27717104 ttgctatgatctcaaattatgcaaagactacttcttctttgtacacatcaatatccattttgggtgaacctggtgtcaaggaatcatggattaagctctt 27717005  T
Q  201 cgatgttggacccttatctgacatcaagcatcctat 236  Q
     ||| |||| ||||| |||  |||  ||||||||||    
T  27717004 tgatattggtcccttgtcttgcatggagcatcctat 27716969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 27724437 - 27724312
Alignment:
Q  89 tgttaaatgggcatgttgctatgatctcaaattgtgtaaagacca---cttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatc 185  Q
    |||||||||||  ||||||||||||   || || || ||||||||   |||| |||||||||||||||||| ||||||| || | ||||||| |||||||    
T  27724437 tgttaaatgggtttgttgctatgattgtaacttatgcaaagaccagtccttctttccacatatcaatatcagttttgggagaacccggtgtcgaggaatc 27724338  T
Q  186 atggactaagctcttcgatgttggac 211  Q
    ||||| |||||| |||||||||||||    
T  27724337 atggattaagcttttcgatgttggac 27724312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 27735679 - 27735527
Alignment:
Q  89 tgttaaatgggcatgttgctatgatctcaaattgtgtaaagacca---cttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatc 185  Q
    ||||||||||   |||||||||||||  || || || ||||||||   |||| |||||||||||||||||| ||||||| || |  |||||||| |||||    
T  27735679 tgttaaatggttttgttgctatgatcgtaacttatgaaaagaccagtccttcattccacatatcaatatcagttttgggagaacctggtgtcaatgaatc 27735580  T
Q  186 atggactaagctcttcgatgttggacccttatctgacatcaagcatcctatcg 238  Q
    ||||| |||||| ||||||||||||||  | |||| |||| | ||||||||||    
T  27735579 atggattaagcttttcgatgttggacctatgtctggcatcgaccatcctatcg 27735527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 13281090 - 13281151
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    |||||||||||||||||  | ||||| || |||||||||||||  |||||||||||||||||    
T  13281090 atatcaattttgggtgaaattggtgttaaagaatcatggactagactcttcgatgttggacc 13281151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 44937855 - 44937794
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    ||||||||||||||||| ||||| || || |||||||||||||| ||||| | |||||||||    
T  44937855 atatcaattttgggtgaactcggcgtgaaagaatcatggactaaactctttgttgttggacc 44937794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 212
Target Start/End: Complemental strand, 14682047 - 14681969
Alignment:
Q  134 cttcgttccacatatcaatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    |||| |||| ||||||||||||| ||||||| || | ||||||||| ||||||||||||||||| ||||||||||||||    
T  14682047 cttctttccgcatatcaatatcagttttgggagaacccggtgtcaatgaatcatggactaagcttttcgatgttggacc 14681969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 27230349 - 27230281
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacccttatct 219  Q
    |||||||||||||||||| | ||||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  27230349 atatcaattttgggtgagattggtgtcaaggaatcatggactagactcttcgatattggacctttatct 27230281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 13024820 - 13024762
Alignment:
Q  158 ttttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggaccctta 216  Q
    |||||||||| ||||||||||| ||||| ||||||||  |||| | |||||||||||||    
T  13024820 ttttgggtgaactcggtgtcaaagaatcgtggactaaattctttgttgttggaccctta 13024762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 13472983 - 13472941
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggacta 193  Q
    |||||||||||||||||  |||||||||| |||||||||||||    
T  13472983 atatcaattttgggtgaaatcggtgtcaaagaatcatggacta 13472941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 15338207 - 15338146
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    ||||||||||||||||| ||||| || || |||||||||||||| || || | |||||||||    
T  15338207 atatcaattttgggtgaactcggcgtgaaagaatcatggactaaactatttgttgttggacc 15338146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 15427272 - 15427211
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    ||||||||||||||||| ||||| || || |||||||||||||| || || | |||||||||    
T  15427272 atatcaattttgggtgaactcggcgtgaaagaatcatggactaaactatttgttgttggacc 15427211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 15518576 - 15518515
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    ||||||||||||||||| ||||| || || |||||||||||||| || || | |||||||||    
T  15518576 atatcaattttgggtgaactcggcgtgaaagaatcatggactaaactatttgttgttggacc 15518515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 27183902 - 27183963
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    ||||| |||||||||||  | |||||||| |||||||||| ||| ||||||||| |||||||    
T  27183902 atatcgattttgggtgaaattggtgtcaaagaatcatggattaaactcttcgatattggacc 27183963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 37408409 - 37408347
Alignment:
Q  154 tcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggaccctta 216  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||||||||||    
T  37408409 tcaattttgggtgagctcggtgtaaaggaatcatggacgaagctattcgttgttggaccctta 37408347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 9764509 - 9764597
Alignment:
Q  150 aatatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacccttatctgacatcaagcatcctatcg 238  Q
    |||||||||||||||||| || ||||||||||||||||||| ||  |||||| ||||||  ||||| |||  |||  ||||||||||||    
T  9764509 aatatcaattttgggtgaacttggtgtcaaggaatcatggattagactcttctatgttgagcccttgtcttgcattgagcatcctatcg 9764597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 24655526 - 24655572
Alignment:
Q  154 tcaattttgggtgagctcggtgtcaaggaatcatggactaagctctt 200  Q
    ||||||||||| || |||||||| |||||||||||||||||| ||||    
T  24655526 tcaattttgggagaactcggtgtaaaggaatcatggactaagatctt 24655572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 29416855 - 29416809
Alignment:
Q  154 tcaattttgggtgagctcggtgtcaaggaatcatggactaagctctt 200  Q
    ||||||||||| || |||||||| |||||||||||||||||| ||||    
T  29416855 tcaattttgggagaactcggtgtaaaggaatcatggactaagatctt 29416809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 39724629 - 39724568
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    |||||||||||||| || |||||| | || |||||||||||||| ||||||  |||||||||    
T  39724629 atatcaattttgggggaactcggtataaaagaatcatggactaaactcttcattgttggacc 39724568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 41996276 - 41996231
Alignment:
Q  156 aattttgggtgagctcggtgtcaaggaatcatggactaagctcttc 201  Q
    |||||||||||| || | ||| ||||||||||||||||||||||||    
T  41996276 aattttgggtgaacttgatgtaaaggaatcatggactaagctcttc 41996231  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 2703734 - 2703795
Alignment:
Q  154 tcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggaccctt 215  Q
    |||||||||||||| || ||||||||||||||||||| ||| ||||| ||||||| ||||||    
T  2703734 tcaattttgggtgaacttggtgtcaaggaatcatggattaaactctttgatgttgaaccctt 2703795  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 29300096 - 29300157
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    ||||||||||||||||||||| || | |||||||| ||||| || |||||| ||||||||||    
T  29300096 atatcaattttgggtgagctcagtataaaggaatcgtggaccaatctcttcaatgttggacc 29300157  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 29124166 - 29124216
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttc 201  Q
    ||||||||| |||||||| ||||| | |||||||||||||| |||||||||    
T  29124166 atatcaattctgggtgagatcggtatgaaggaatcatggaccaagctcttc 29124216  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 29012850 - 29012911
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggacc 212  Q
    |||||||||||||| ||  ||||||| |||||||||||||| || ||||||  |||||||||    
T  29012850 atatcaattttgggggatttcggtgtgaaggaatcatggaccaaactcttcattgttggacc 29012911  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 48742043 - 48741978
Alignment:
Q  151 atatcaattttgggtgagctcggtgtcaaggaatcatggactaagctcttcgatgttggaccctta 216  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||| ||||||  | |||||||||||    
T  48742043 atatcaattttaggtgaactcggtgtgaaggaatcttggactaaactcttcatttttggaccctta 48741978  T

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