View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18776_low_15 (Length: 397)

Name: NF18776_low_15
Description: NF18776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18776_low_15
NF18776_low_15
[»] chr3 (49 HSPs)
chr3 (3-256)||(27969459-27969716)
chr3 (8-156)||(33982983-33983130)
chr3 (17-230)||(6888603-6888829)
chr3 (17-128)||(42854288-42854398)
chr3 (17-113)||(19975781-19975876)
chr3 (19-130)||(21075881-21075991)
chr3 (17-144)||(43735985-43736110)
chr3 (19-130)||(43746276-43746387)
chr3 (19-130)||(46311861-46311971)
chr3 (307-388)||(42853893-42853969)
chr3 (22-130)||(27877532-27877639)
chr3 (74-150)||(50737916-50737992)
chr3 (307-388)||(27969809-27969885)
chr3 (19-130)||(46219100-46219211)
chr3 (337-388)||(6888349-6888400)
chr3 (17-115)||(2869006-2869103)
chr3 (307-388)||(33983314-33983390)
chr3 (74-143)||(50774862-50774931)
chr3 (47-130)||(54313359-54313441)
chr3 (8-130)||(21389735-21389856)
chr3 (8-101)||(24310793-24310885)
chr3 (70-130)||(32774455-32774515)
chr3 (196-256)||(42854139-42854194)
chr3 (254-353)||(6888425-6888534)
chr3 (85-131)||(21392693-21392739)
chr3 (70-130)||(3995071-3995131)
chr3 (70-130)||(7910172-7910232)
chr3 (70-130)||(26823061-26823121)
chr3 (87-131)||(49507922-49507966)
chr3 (87-131)||(54312851-54312895)
chr3 (196-231)||(33983180-33983215)
chr3 (279-330)||(33983237-33983288)
chr3 (47-130)||(51885324-51885406)
chr3 (47-116)||(1460313-1460381)
chr3 (90-131)||(12769203-12769244)
chr3 (47-116)||(42481043-42481111)
chr3 (70-130)||(1842581-1842641)
chr3 (70-130)||(3974746-3974806)
chr3 (86-130)||(9301074-9301118)
chr3 (70-130)||(10267882-10267942)
chr3 (70-130)||(10804550-10804610)
chr3 (70-130)||(12768643-12768703)
chr3 (70-130)||(26898261-26898321)
chr3 (86-130)||(29522812-29522856)
chr3 (87-131)||(32773955-32773999)
chr3 (70-130)||(41209399-41209459)
chr3 (70-130)||(41933320-41933380)
chr3 (86-130)||(43088028-43088072)
chr3 (70-130)||(55423759-55423819)
[»] chr7 (38 HSPs)
chr7 (8-156)||(47381447-47381594)
chr7 (8-138)||(33604547-33604676)
chr7 (17-116)||(7505238-7505336)
chr7 (8-157)||(2621406-2621554)
chr7 (17-113)||(31272129-31272224)
chr7 (19-130)||(23025165-23025275)
chr7 (17-130)||(35709894-35710006)
chr7 (8-115)||(10993178-10993285)
chr7 (19-130)||(1873639-1873749)
chr7 (19-130)||(39494039-39494150)
chr7 (71-150)||(49112592-49112671)
chr7 (22-142)||(17511285-17511404)
chr7 (22-142)||(17541810-17541929)
chr7 (71-150)||(4266913-4266992)
chr7 (19-130)||(16526191-16526301)
chr7 (19-141)||(41200226-41200347)
chr7 (71-130)||(17475732-17475791)
chr7 (71-130)||(17577423-17577482)
chr7 (70-130)||(8613796-8613856)
chr7 (87-131)||(13598659-13598703)
chr7 (91-131)||(22791284-22791324)
chr7 (70-130)||(32795757-32795817)
chr7 (70-130)||(37471532-37471592)
chr7 (70-130)||(47761697-47761757)
chr7 (47-130)||(8781506-8781588)
chr7 (47-130)||(33626938-33627020)
chr7 (89-131)||(8782350-8782392)
chr7 (47-116)||(13598094-13598162)
chr7 (90-131)||(32527488-32527529)
chr7 (90-131)||(33626416-33626457)
chr7 (73-130)||(35528391-35528448)
chr7 (70-130)||(3319048-3319108)
chr7 (86-130)||(15457200-15457244)
chr7 (87-131)||(18833720-18833764)
chr7 (86-130)||(34202669-34202713)
chr7 (86-130)||(36643395-36643439)
chr7 (87-131)||(36643894-36643938)
chr7 (70-130)||(39560548-39560608)
[»] chr6 (28 HSPs)
chr6 (17-156)||(20139215-20139353)
chr6 (17-156)||(22193516-22193654)
chr6 (10-126)||(31472486-31472601)
chr6 (18-115)||(27966762-27966858)
chr6 (19-130)||(15065930-15066040)
chr6 (2-150)||(12076616-12076761)
chr6 (19-108)||(12272224-12272312)
chr6 (19-115)||(10997743-10997838)
chr6 (16-143)||(31655511-31655637)
chr6 (27-125)||(3044290-3044387)
chr6 (25-130)||(11369572-11369677)
chr6 (71-116)||(17869271-17869316)
chr6 (47-130)||(29034499-29034581)
chr6 (70-130)||(2067187-2067247)
chr6 (70-130)||(4170942-4171002)
chr6 (70-130)||(15068028-15068088)
chr6 (70-129)||(26555226-26555285)
chr6 (86-130)||(2289981-2290025)
chr6 (70-130)||(2703004-2703064)
chr6 (70-130)||(9035107-9035167)
chr6 (70-130)||(12577331-12577391)
chr6 (86-130)||(13835980-13836024)
chr6 (70-130)||(15183754-15183814)
chr6 (70-130)||(17547541-17547601)
chr6 (86-130)||(22988178-22988222)
chr6 (86-130)||(23800174-23800218)
chr6 (70-130)||(29641053-29641113)
chr6 (70-130)||(31511232-31511292)
[»] chr8 (37 HSPs)
chr8 (3-150)||(42739335-42739481)
chr8 (19-144)||(2349696-2349819)
chr8 (8-114)||(3940661-3940767)
chr8 (19-130)||(30436457-30436568)
chr8 (19-130)||(35813426-35813537)
chr8 (17-130)||(15243774-15243886)
chr8 (27-143)||(28968204-28968319)
chr8 (17-143)||(9201110-9201235)
chr8 (19-115)||(3654313-3654408)
chr8 (16-113)||(29894474-29894570)
chr8 (47-145)||(34347002-34347100)
chr8 (8-130)||(40027727-40027848)
chr8 (62-116)||(6142940-6142994)
chr8 (71-132)||(957506-957567)
chr8 (70-130)||(5927122-5927182)
chr8 (70-130)||(6266315-6266375)
chr8 (70-130)||(7433453-7433513)
chr8 (70-130)||(11202196-11202256)
chr8 (87-131)||(22486816-22486860)
chr8 (70-130)||(24101762-24101822)
chr8 (70-130)||(26098317-26098377)
chr8 (70-130)||(31894949-31895009)
chr8 (70-130)||(37819255-37819315)
chr8 (70-130)||(38231742-38231802)
chr8 (86-130)||(40027567-40027611)
chr8 (70-129)||(20823518-20823577)
chr8 (70-131)||(38894759-38894820)
chr8 (70-130)||(7161614-7161674)
chr8 (70-130)||(15041379-15041439)
chr8 (70-130)||(21412488-21412548)
chr8 (70-130)||(21806980-21807040)
chr8 (70-130)||(29940108-29940168)
chr8 (87-131)||(38895250-38895294)
chr8 (87-131)||(40027046-40027090)
chr8 (70-130)||(41644191-41644251)
chr8 (70-126)||(41827572-41827628)
chr8 (70-130)||(44679170-44679230)
[»] chr4 (44 HSPs)
chr4 (3-150)||(43286235-43286381)
chr4 (8-150)||(52464069-52464210)
chr4 (8-126)||(32767574-32767691)
chr4 (8-196)||(3415158-3415327)
chr4 (19-144)||(32594047-32594171)
chr4 (19-130)||(20034291-20034401)
chr4 (19-130)||(27870026-27870136)
chr4 (16-150)||(51401315-51401448)
chr4 (19-116)||(44341197-44341293)
chr4 (19-143)||(1705187-1705309)
chr4 (19-130)||(39345835-39345946)
chr4 (19-130)||(45522504-45522614)
chr4 (19-130)||(47295568-47295678)
chr4 (19-115)||(17543751-17543847)
chr4 (17-101)||(19240771-19240854)
chr4 (27-143)||(34859040-34859155)
chr4 (19-130)||(9455330-9455440)
chr4 (23-130)||(54134485-54134591)
chr4 (19-115)||(951377-951472)
chr4 (19-130)||(34030301-34030410)
chr4 (17-100)||(41361259-41361341)
chr4 (29-115)||(2323804-2323889)
chr4 (8-143)||(50004729-50004862)
chr4 (17-106)||(1324945-1325033)
chr4 (351-386)||(3414964-3414999)
chr4 (47-130)||(16623483-16623565)
chr4 (70-130)||(15194522-15194582)
chr4 (71-123)||(16029785-16029837)
chr4 (70-130)||(56264420-56264480)
chr4 (47-130)||(19474703-19474785)
chr4 (85-132)||(34031115-34031162)
chr4 (70-129)||(56520011-56520070)
chr4 (89-131)||(41882644-41882686)
chr4 (127-156)||(32767706-32767735)
chr4 (70-127)||(39240444-39240501)
chr4 (70-130)||(401374-401434)
chr4 (70-130)||(6643310-6643370)
chr4 (87-131)||(16624059-16624103)
chr4 (70-130)||(26706924-26706984)
chr4 (70-130)||(35666626-35666686)
chr4 (70-130)||(41140648-41140708)
chr4 (70-126)||(51435595-51435651)
chr4 (70-130)||(54094003-54094063)
chr4 (86-130)||(56114210-56114254)
[»] chr1 (39 HSPs)
chr1 (8-150)||(46237569-46237710)
chr1 (17-152)||(32057557-32057691)
chr1 (19-150)||(48470402-48470532)
chr1 (19-130)||(33189029-33189139)
chr1 (19-130)||(12745580-12745691)
chr1 (19-130)||(12756569-12756680)
chr1 (19-150)||(6501612-6501742)
chr1 (19-130)||(9660818-9660928)
chr1 (19-130)||(43781162-43781272)
chr1 (19-130)||(45757233-45757343)
chr1 (19-130)||(42763244-42763354)
chr1 (19-150)||(49229138-49229267)
chr1 (71-150)||(45565814-45565893)
chr1 (16-130)||(31489496-31489609)
chr1 (71-130)||(45039032-45039091)
chr1 (41-131)||(15699305-15699394)
chr1 (8-149)||(4220876-4221015)
chr1 (21-115)||(47188574-47188665)
chr1 (70-130)||(1858793-1858853)
chr1 (3-130)||(17331248-17331375)
chr1 (70-130)||(19406689-19406749)
chr1 (87-131)||(40412020-40412064)
chr1 (70-130)||(41310546-41310606)
chr1 (70-130)||(44922234-44922294)
chr1 (70-130)||(50511998-50512058)
chr1 (71-130)||(5114949-5115008)
chr1 (15-110)||(30533392-30533486)
chr1 (47-130)||(35985510-35985592)
chr1 (90-131)||(700524-700565)
chr1 (70-130)||(20722232-20722292)
chr1 (70-130)||(21088547-21088607)
chr1 (87-131)||(25422779-25422823)
chr1 (86-130)||(28199276-28199320)
chr1 (70-130)||(30723343-30723403)
chr1 (86-130)||(39995477-39995521)
chr1 (70-130)||(40412536-40412596)
chr1 (70-130)||(42102233-42102293)
chr1 (70-130)||(48812557-48812617)
chr1 (47-115)||(48940828-48940895)
[»] chr5 (43 HSPs)
chr5 (3-130)||(38976239-38976365)
chr5 (10-152)||(33908097-33908238)
chr5 (8-130)||(9996232-9996353)
chr5 (19-130)||(6955782-6955892)
chr5 (19-130)||(35038743-35038853)
chr5 (20-123)||(37206036-37206138)
chr5 (19-130)||(38356016-38356126)
chr5 (3-130)||(1398351-1398478)
chr5 (19-130)||(6238185-6238296)
chr5 (19-130)||(6899895-6900006)
chr5 (19-130)||(35838110-35838221)
chr5 (19-130)||(10642036-10642146)
chr5 (19-130)||(21731717-21731827)
chr5 (40-130)||(4975787-4975876)
chr5 (10-116)||(31230247-31230352)
chr5 (19-130)||(4699920-4700031)
chr5 (19-130)||(24477286-24477397)
chr5 (72-147)||(3436694-3436769)
chr5 (65-130)||(3296166-3296231)
chr5 (40-116)||(38986610-38986685)
chr5 (19-130)||(20338499-20338609)
chr5 (19-130)||(42860306-42860416)
chr5 (2-116)||(36866102-36866215)
chr5 (33-130)||(36016288-36016384)
chr5 (27-150)||(17085407-17085529)
chr5 (47-130)||(24566246-24566328)
chr5 (47-130)||(24607282-24607364)
chr5 (47-130)||(26264399-26264481)
chr5 (48-130)||(17320389-17320470)
chr5 (17-81)||(74980-75043)
chr5 (70-130)||(20122748-20122808)
chr5 (70-130)||(28759379-28759439)
chr5 (70-130)||(39479386-39479446)
chr5 (71-130)||(40917897-40917956)
chr5 (70-116)||(17016523-17016569)
chr5 (57-130)||(1845459-1845532)
chr5 (87-132)||(17320977-17321022)
chr5 (47-132)||(21162679-21162763)
chr5 (87-124)||(37205272-37205309)
chr5 (70-126)||(2466319-2466375)
chr5 (87-127)||(7344243-7344283)
chr5 (70-130)||(8320504-8320564)
chr5 (86-130)||(19646966-19647010)
[»] chr2 (35 HSPs)
chr2 (17-130)||(15614149-15614261)
chr2 (8-144)||(5271064-5271199)
chr2 (20-150)||(9470828-9470957)
chr2 (62-150)||(20922740-20922828)
chr2 (19-130)||(15560566-15560676)
chr2 (19-130)||(25096307-25096417)
chr2 (8-123)||(38838045-38838159)
chr2 (19-129)||(21747420-21747529)
chr2 (19-130)||(29201406-29201516)
chr2 (19-130)||(42730715-42730824)
chr2 (19-130)||(40000787-40000896)
chr2 (20-116)||(17920791-17920886)
chr2 (17-87)||(17071256-17071325)
chr2 (28-130)||(40861035-40861136)
chr2 (18-87)||(17088255-17088323)
chr2 (19-87)||(17077328-17077395)
chr2 (47-130)||(10822287-10822369)
chr2 (47-130)||(31618103-31618185)
chr2 (17-130)||(4564919-4565030)
chr2 (70-130)||(13247770-13247830)
chr2 (70-130)||(27495925-27495985)
chr2 (70-130)||(30801215-30801275)
chr2 (70-130)||(35439545-35439605)
chr2 (120-154)||(4565034-4565068)
chr2 (86-130)||(1002514-1002558)
chr2 (70-130)||(1346287-1346347)
chr2 (70-130)||(2650097-2650157)
chr2 (87-127)||(10821741-10821781)
chr2 (87-131)||(13312112-13312156)
chr2 (86-130)||(27552032-27552076)
chr2 (87-131)||(27554001-27554045)
chr2 (70-130)||(28222955-28223015)
chr2 (87-131)||(30556199-30556243)
chr2 (87-131)||(34314322-34314366)
chr2 (70-130)||(36240761-36240821)
[»] scaffold0295 (1 HSPs)
scaffold0295 (27-154)||(6177-6303)
[»] scaffold0219 (1 HSPs)
scaffold0219 (29-130)||(16630-16730)
[»] scaffold1449 (1 HSPs)
scaffold1449 (17-87)||(1581-1650)
[»] scaffold0664 (1 HSPs)
scaffold0664 (70-130)||(7792-7852)
[»] scaffold0019 (1 HSPs)
scaffold0019 (70-116)||(103134-103180)
[»] scaffold0661 (1 HSPs)
scaffold0661 (47-116)||(1589-1657)
[»] scaffold0036 (1 HSPs)
scaffold0036 (70-130)||(27666-27726)
[»] scaffold0007 (2 HSPs)
scaffold0007 (70-130)||(56273-56333)
scaffold0007 (70-130)||(231680-231740)


Alignment Details
Target: chr3 (Bit Score: 128; Significance: 5e-66; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 3 - 256
Target Start/End: Original strand, 27969459 - 27969716
Alignment:
Q  3 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 102  Q
    |||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  27969459 ctagagctgtcaaaatggaccgacccgaaagcccgcataaaacgtagggcttgggcc-taataattggagcccgaatttttcccgggctttttagcccgg 27969557  T
Q  103 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga-tgggtcannnnnnnnnggtgtggtgtctgctgggcctgg------ 195  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||         |||||||||||||||||||||||          
T  27969558 accgaaaaagcccggagcccgttcgggccacgggcagcccgcaaaaaattaagagtgggtca----tttttggtgtggtgtctgctgggcctggattgga 27969653  T
Q  196 -------atattagggatccggcccaaattaaaataaccctaactcaactcacgtatgtgacatcagc 256  Q
           ||||||||||||||||||||||| ||||||||||     ||||||||||||||||||||||    
T  27969654 caacccaatattagggatccggcccaaattgaaataaccct-----aactcacgtatgtgacatcagc 27969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 156
Target Start/End: Original strand, 33982983 - 33983130
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  33982983 gctgtcaaaatgggccggcccgaaagcccaaataaaatgtagggcttgggcc-taataattggagcccgaatttttccagggctttttagcccggcccgg 33983081  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga 156  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  33983082 aaaagcccggagcccgtttgggccacgggcagctcgcaaaaaattaaga 33983130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 6888829 - 6888603
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6888829 atgggccggcccgaaagcccgcataaaatatagggcttgggcc-taataattggagcccgaatttttccagggctttttagcccggcccggaaaagcccg 6888731  T
Q  117 gagcccgttagggccacgggcag--------cccgcaaaaaattaagatgggtca------nnnnnnnnnggtgtggtgtctgctgggcctggatattag 202  Q
    ||||||||| |||||||||||||        ||||||||||||||| ||||||||                |||||||||||||||||||||||||||||    
T  6888730 gagcccgttcgggccacgggcagcccgacagcccgcaaaaaattaaaatgggtcatttttttttttttttcgtgtggtgtctgctgggcctggatattag 6888631  T
Q  203 ggatccggcccaaattaaaataacccta 230  Q
    |||||||||||||||||||| |||||||    
T  6888630 ggatccggcccaaattaaaaaaacccta 6888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 42854398 - 42854288
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||  ||||||||||    
T  42854398 atgggccagcccgaaagcccgcataaaacgtagggcttgggcc-taataattggagcccgaattttttcaaggctttttagcccggcctaaaaaagcccg 42854300  T
Q  117 gagcccgttagg 128  Q
    ||| ||||||||    
T  42854299 gagtccgttagg 42854288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 19975781 - 19975876
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagc 113  Q
    |||||||||||  |||||||| |||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  19975781 atgggccggccgaaaagcccgaataaaatgtagggcttgggtc-taataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagc 19975876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 21075991 - 21075881
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  21075991 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 21075893  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  21075892 gcccgttagggc 21075881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 144
Target Start/End: Original strand, 43735985 - 43736110
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||| ||||||||||||| |||||||| ||||| ||||||  || ||||||||||| |||||| | ||||||||||||||||||||| |||||||||    
T  43735985 atgggccagcccgaaagcccgaataaaacgcagggcctgggccgaaa-aattggagcccaaatttt-ctagggctttttagcccggcccgtaaaagcccg 43736082  T
Q  117 gagcccgttagggccacgggcagcccgc 144  Q
     | ||| || ||||| ||||||||||||    
T  43736083 taacccattcgggcctcgggcagcccgc 43736110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 43746387 - 43746276
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  43746387 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 43746289  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  43746288 ggcccgttagggc 43746276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 46311861 - 46311971
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||||||||||||| || ||    ||||||||||||||||||||| ||||||||       
T  46311861 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccaaaattgaagagggctttttagcccggcccgtaaaagcccttg 46311959  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  46311960 gcccgttagggc 46311971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 42853969 - 42853893
Alignment:
Q  307 cacgcgattccgattccgcgattccattcatcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 388  Q
    |||||||||||||||||||||||||  |||||||||||| ||     |||||||||||||||||||||||||||||||||||    
T  42853969 cacgcgattccgattccgcgattccgatcatcaagctcaggc-----gattccgattctggcagctgaaatcacacaggttc 42853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 27877532 - 27877639
Alignment:
Q  22 ccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcc 121  Q
    |||| ||||||||||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||   |||    
T  27877532 ccggtccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttggcc 27877630  T
Q  122 cgttagggc 130  Q
    |||||||||    
T  27877631 cgttagggc 27877639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 74 - 150
Target Start/End: Complemental strand, 50737992 - 50737916
Alignment:
Q  74 ccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||| | | |||||||||||||||    
T  50737992 ccgaattttttcagggttttttagcccggcccgaaaaagcccgaagctcgttagggctaagagcagcccgcaaaaaa 50737916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 27969809 - 27969885
Alignment:
Q  307 cacgcgattccgattccgcgattccattcatcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 388  Q
    |||||||||||||||| ||||||||  |||||||||||||||     ||||| |||||||||||||||||||||||||||||    
T  27969809 cacgcgattccgattctgcgattccgatcatcaagctcacgc-----gattctgattctggcagctgaaatcacacaggttc 27969885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 46219100 - 46219211
Alignment:
Q  19 gggccggcccgaaa-gcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgg 117  Q
    |||||||||||||| ||||| |||||| ||||||||||||||  ||||||||||||||||| ||    |||||||||||||| |||||| ||||||||      
T  46219100 gggccggcccgaaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagccgggcccgtaaaagccctt 46219198  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  46219199 ggcccgttagggc 46219211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 337 - 388
Target Start/End: Complemental strand, 6888400 - 6888349
Alignment:
Q  337 tcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 388  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  6888400 tcaagctcacaccgtgcgattccgattctggcagctgaaatcacacaggttc 6888349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 2869006 - 2869103
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    |||||| |||||||||||||| ||||||||||| ||||||| ||| | ||||| ||||||||||| |  ||||||||||| |||||||||  |||||||    
T  2869006 atgggctggcccgaaagcccgaataaaacgtagagcttggg-cctgaaaattgcagcccgaatttctttagggctttttaacccggcccgtgaaagccc 2869103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 33983314 - 33983390
Alignment:
Q  307 cacgcgattccgattccgcgattccattcatcaagctcacgccgcgcgattccgattctggcagctgaaatcacacaggttc 388  Q
    ||||||||||||||||||||||||   ||||||||||||     ||||||||||||| ||| ||||||||||||||||||||    
T  33983314 cacgcgattccgattccgcgattcgtatcatcaagctca-----cgcgattccgattatggaagctgaaatcacacaggttc 33983390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 50774862 - 50774931
Alignment:
Q  74 ccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccg 143  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||| | | ||||||||    
T  50774862 ccgaattttttcagggttttttagcccggcccgaaaaagcccgaagctcgttagggctaagagcagcccg 50774931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 54313441 - 54313359
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||||||||  |||||||||||    
T  54313441 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccgttagggc 54313359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 21389735 - 21389856
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||| |||||||| |||||||| | | |||| |||||||||||| ||||| ||| | ||||| |||||    |||| ||||| |||| |||||     
T  21389735 gctgtcaaaacgggccggctcgaaagcctgaaaaaaatgtagggcttggg-cctaaaaatggcagcccaaatttaaatagggttttttggcccagcccgt 21389833  T
Q  108 aaaagcccggagcccgttagggc 130  Q
    ||||||||| |||||||||||||    
T  21389834 aaaagcccgaagcccgttagggc 21389856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 24310793 - 24310885
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 101  Q
    |||||||||| |||||||||||||| |||| ||||||||||||| ||  | ||||| ||||| |||||||||||||  |||  |||||||||||    
T  24310793 gctgtcaaaacgggccggcccgaaaacccgaataaaacgtaggg-tttagacctaaaaattgcagcccgaatttttttaggattttttagcccg 24310885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 32774515 - 32774455
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||| |||||||||||  |||||||||||    
T  32774515 gagcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccgttagggc 32774455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 42854194 - 42854139
Alignment:
Q  196 atattagggatccggcccaaattaaaataaccctaactcaactcacgtatgtgacatcagc 256  Q
    ||||||||||||||||||||||| ||||||||||||     ||||||||||||||||||||    
T  42854194 atattagggatccggcccaaattgaaataaccctaa-----ctcacgtatgtgacatcagc 42854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 353
Target Start/End: Complemental strand, 6888534 - 6888425
Alignment:
Q  254 agcggcctcactctctca---ctcacagtcacacaccgtca-------aactcttttcttctccacgc-----gattccgattccgcgattccattcatc 338  Q
    ||||||||||||||||||   ||||||||||||||||||||       ||||||||||||||||||||     |||||||||||     |||||||||||    
T  6888534 agcggcctcactctctcagttctcacagtcacacaccgtcatccgtcaaactcttttcttctccacgccacgcgattccgattc-----ttccattcatc 6888440  T
Q  339 aagctcacgccgcgc 353  Q
    |||||||||||||||    
T  6888439 aagctcacgccgcgc 6888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 21392693 - 21392739
Alignment:
Q  85 cagggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  21392693 cagggctttttggcccggcccgataaagcccgaagcccgttagggcc 21392739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 3995071 - 3995131
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  3995071 gagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 3995131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 7910232 - 7910172
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  7910232 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 7910172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 26823061 - 26823121
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  26823061 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 26823121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 49507922 - 49507966
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  49507922 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 49507966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 54312895 - 54312851
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  54312895 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 54312851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 33983180 - 33983215
Alignment:
Q  196 atattagggatccggcccaaattaaaataaccctaa 231  Q
    ||||||||||||||||||||||| ||||||||||||    
T  33983180 atattagggatccggcccaaattgaaataaccctaa 33983215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 33983237 - 33983288
Alignment:
Q  279 tcacacaccgtcaaactcttttcttctccacgcgattccgattccgcgattc 330  Q
    |||||||| |||| ||||||||||||||||||||||||  ||||| ||||||    
T  33983237 tcacacacggtcacactcttttcttctccacgcgattcacattccacgattc 33983288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 51885406 - 51885324
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||| |||   |||||||||||    
T  51885406 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagtccgctacccgttagggc 51885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 1460381 - 1460313
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||| |||  |||| ||||||||||||   || ||||||||||||||||| ||||||||||    
T  1460381 tagggcttgggccttaaatattg-agcccgaattttaatagagctttttagcccggccctaaaaagcccg 1460313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 12769203 - 12769244
Alignment:
Q  90 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    |||||| ||||||||||| |||||||| ||||||||||||||    
T  12769203 ctttttggcccggcccgataaagcccgaagcccgttagggcc 12769244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 42481111 - 42481043
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||| |||  |||| |||||| |||||   |||||||||||||||||||| ||||||||||    
T  42481111 tagggcttgggccttaaatattg-agcccggattttaatagggctttttagcccggccctaaaaagcccg 42481043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 1842581 - 1842641
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   | ||||||||||||||||||  ||||||||||  |||||||||||    
T  1842581 gagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgttagggc 1842641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 3974806 - 3974746
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||| ||||| ||||   |||||||||||    
T  3974806 gagcccgaattttaatagggctttttagcccggccctaaaaatcccgctacccgttagggc 3974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 9301118 - 9301074
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  9301118 agggctttttagcccggcccttaaaagcccggtacccgttagggc 9301074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 10267882 - 10267942
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  10267882 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgttacccgttagggc 10267942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 10804610 - 10804550
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||||| |  |||||||||||    
T  10804610 gagcccgaattttaatagggctttttagcccggcccttaaaagcccagtacccgttagggc 10804550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 12768643 - 12768703
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||| ||||| |||||||||||   ||||||||||    
T  12768643 gagcccgaattttaatagggctttttagcctggccctaaaaagcccggtatccgttagggc 12768703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 26898261 - 26898321
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||| ||||  |||||||||||    
T  26898261 gagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttagggc 26898321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 29522856 - 29522812
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||||||||| ||||||||||   |||||||||||    
T  29522856 agggctttttagcccggccctaaaaagcccgctacccgttagggc 29522812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 32773999 - 32773955
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  32773999 gggcttttttgcccggcccgataaaggccgaagcccgttagggcc 32773955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 41209459 - 41209399
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||| ||| |||||| ||||  |||||||||||    
T  41209459 gagcccgaattttaatagggctttttagcccgaccctaaaaagtccggtacccgttagggc 41209399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 41933320 - 41933380
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||| ||||||||||  ||||||||||  |||||||||||    
T  41933320 gagcccgaattttaatagggcttttcagcccggcccttaaaagcccggtacccgttagggc 41933380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 43088028 - 43088072
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  43088028 agggctttttagcccggcccttaaaagcccggtacccgttagggc 43088072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 55423759 - 55423819
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||| |||||||||||||||  ||||||||||  |||||||||||    
T  55423759 gagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgttagggc 55423819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 3e-64; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 8 - 156
Target Start/End: Complemental strand, 47381594 - 47381447
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  47381594 gctgtcaaaatgggccggcccgaaaatccgcataaaacgtagggcttgggcc-taataattggagcccgaatttttccagggctttttagcccggcccaa 47381496  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga 156  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47381495 aaaagcccggagcccgttcgggccacgggcagcccgcaaaaaattaaga 47381447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 33604547 - 33604676
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    ||||||||||  |||||||||||||| |||  |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  33604547 gctgtcaaaacaggccggcccgaaagtccgagtaaaacgtagggcttgggcc-taataattgtagcccgaatttttccagggctttttagcccgacccga 33604645  T
Q  108 aaaagcccggagcccgttagggccacgggca 138  Q
    ||||||||  |||||||||||||||||||||    
T  33604646 aaaagcccatagcccgttagggccacgggca 33604676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 7505238 - 7505336
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||||||||| | |||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  7505238 atgggccggcccgaaagcctgaataaaatgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccgtaaaagcccg 7505336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 2621554 - 2621406
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||| ||| | ||  ||||||||| ||||||||||||| ||| ||| ||||||||| ||||||||||||  || ||| |||||  ||||||| |    
T  2621554 gctgtcaaaacgggtcagcttgaaagcccgaataaaacgtagggtttgagcc-taataattgcagcccgaattttctcaaggccttttaatccggcccaa 2621456  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaagat 157  Q
    ||||||||| |||||||| ||||||||| |||||||| ||||||||||||    
T  2621455 aaaagcccgtagcccgtttgggccacggacagcccgcgaaaaattaagat 2621406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 31272224 - 31272129
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagc 113  Q
    |||||||| ||| |||||||| |||||| |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||    
T  31272224 atgggccgacccaaaagcccgaataaaatgtagggcttgggcc-taataattgcagcacgaatttttccagggctttttagcccggcccgtaaaagc 31272129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 23025165 - 23025275
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||  |    
T  23025165 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccctta 23025263  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  23025264 gcccgttagggc 23025275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 35709894 - 35710006
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||| ||||||||||||| |||||||| |||||||||||| ||| ||||| |||||  |||||  ||||||||||||||||||||||||||||||||    
T  35709894 atgggccagcccgaaagcccgaataaaacgcagggcttgggcc-taaaaattgcagcccatattttatcagggctttttagcccggcccgaaaaagcccg 35709992  T
Q  117 gagcccgttagggc 130  Q
     | |||||| ||||    
T  35709993 caacccgttcgggc 35710006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 10993178 - 10993285
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccg 106  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||| |||| |||    |||||||||||||||||||||    
T  10993178 gctgtcaaaatgggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagctcgaaatttgaagagggctttttagcccggcccg 10993276  T
Q  107 aaaaagccc 115  Q
     ||||||||    
T  10993277 taaaagccc 10993285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 1873639 - 1873749
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  1873639 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 1873737  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  1873738 gcccgttagggc 1873749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 39494150 - 39494039
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||| | ||||||||      
T  39494150 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcctgtaaaagccctt 39494052  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  39494051 ggcccgttagggc 39494039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 49112592 - 49112671
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||  | |||||| |||| | |||||||||||||||||    
T  49112592 agcccgaattttttcagggctttttagcccgacccgaaaaagcccaaaacccgttcgggctaagggcagcccgcaaaaaa 49112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 17511404 - 17511285
Alignment:
Q  22 ccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcc 121  Q
    |||||||||||||| | |||||| ||||| | ||||||   | ||| | ||||||||||||| ||||| |||||||||||||||||||||||||| |||     
T  17511404 ccggcccgaaagcctgaataaaatgtaggtcctgggccgata-aatagtagcccgaattttttcagggttttttagcccggcccgaaaaagcccgaagct 17511306  T
Q  122 cgttagggccacgggcagccc 142  Q
    |||| |||| | |||||||||    
T  17511305 cgttcgggctaagggcagccc 17511285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 17541810 - 17541929
Alignment:
Q  22 ccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcc 121  Q
    |||||||||||||| | |||||| ||||| | ||||||   | ||| | ||||||||||||| ||||| |||||||||||||||||||||||||| |||     
T  17541810 ccggcccgaaagcctgaataaaatgtaggtcctgggccgata-aatagtagcccgaattttttcagggttttttagcccggcccgaaaaagcccgaagct 17541908  T
Q  122 cgttagggccacgggcagccc 142  Q
    |||| |||| | |||||||||    
T  17541909 cgttcgggctaagggcagccc 17541929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 4266913 - 4266992
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||||||||||||| |||||||||||||||| || |||||| ||||| ||| |||| |||| | |||||||||||||||||    
T  4266913 agcccgaattttttcagggctttttagcccagcacgaaaatgcccgaagctcgttcgggctaagggcagcccgcaaaaaa 4266992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 16526191 - 16526301
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||| ||| |||||| |||||||||| | || ||||||||||||||||| ||    |||||||||||| |||||||| ||||||||       
T  16526191 gggccggcccgaaagtccgaataaaatgtagggcttgag-ccgaataattggagcccgaaattgaagagggctttttagtccggcccgtaaaagcccttg 16526289  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  16526290 gcccgttagggc 16526301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 41200226 - 41200347
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||  |||||| ||||||| || |||   | ||| | ||||||||||||| ||||| |||||||||||| ||||||||||||| |    
T  41200226 gggccggcccgaaagcccaaataaaatgtagggcctgagccgata-aatagcagcccgaattttttcagggttttttagcccggtccgaaaaagcccgaa 41200324  T
Q  119 gcccgttagggccacgggcagcc 141  Q
    || |||| |||| | ||||||||    
T  41200325 gcacgttcgggctaagggcagcc 41200347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 17475791 - 17475732
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  17475791 agcccgaattttttcagggttttttagcccgacccgaaaaagcccgaagctcgttagggc 17475732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 17577423 - 17577482
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  17577423 agcccgaattttttcagggttttttagcccgacccgaaaaagcccgaagctcgttagggc 17577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 8613796 - 8613856
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  8613796 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 8613856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 13598659 - 13598703
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  13598659 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 13598703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 22791324 - 22791284
Alignment:
Q  91 tttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  22791324 tttttagcccggcccgataaagcccgaagcccgttagggcc 22791284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 32795757 - 32795817
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  32795757 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 32795817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 37471592 - 37471532
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  37471592 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 37471532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 47761757 - 47761697
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  47761757 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 47761697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 8781506 - 8781588
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   ||||||||||||||||| || ||||||||||   |||||||||||    
T  8781506 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggtcctaaaaagcccgctacccgttagggc 8781588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 33627020 - 33626938
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| ||||| ||||   |||||||||||    
T  33627020 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaaccccgctacccgttagggc 33626938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 8782350 - 8782392
Alignment:
Q  89 gctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||    
T  8782350 gctttttggcccggcccgataaagcccgaagcccgttagggcc 8782392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 13598094 - 13598162
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||| |||  |||| || |||||||||   |||||||||||||||||||| ||||||||||    
T  13598094 tagggcttgggccttaaatattg-agtccgaattttaatagggctttttagcccggccctaaaaagcccg 13598162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 32527529 - 32527488
Alignment:
Q  90 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    |||||| ||||||||||| |||||||| ||||||||||||||    
T  32527529 ctttttggcccggcccgataaagcccgaagcccgttagggcc 32527488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 33626457 - 33626416
Alignment:
Q  90 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    |||||| ||||||||||| |||||||| ||||||||||||||    
T  33626457 ctttttggcccggcccgataaagcccgaagcccgttagggcc 33626416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 35528448 - 35528391
Alignment:
Q  73 cccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||   |||| ||||||||||||||| |||||||||||  |||||||||||    
T  35528448 cccgaattttaatagggttttttagcccggccctaaaaagcccggtacccgttagggc 35528391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 3319108 - 3319048
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||  |||||||||||||| |||||||||||  |||||||||||    
T  3319108 gagcccgaattttaatagggtcttttagcccggccctaaaaagcccggtacccgttagggc 3319048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 15457244 - 15457200
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||| ||||| |||||||||||  |||||||||||    
T  15457244 agggctttttagccgggccctaaaaagcccggtacccgttagggc 15457200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 18833764 - 18833720
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||| ||| |||||||| ||||||||||||||    
T  18833764 gggctttttggcccggcacgataaagcccgaagcccgttagggcc 18833720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 34202713 - 34202669
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  34202713 agggctttttagcccggcccttaaaagcccggtacccgttagggc 34202669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 36643395 - 36643439
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||| |||||||| |||||||||||  |||||||||||    
T  36643395 agggctttttaccccggccctaaaaagcccggtacccgttagggc 36643439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 36643894 - 36643938
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  36643894 gggctttttggcccggcccgataaagtccgaagcccgttagggcc 36643938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 39560548 - 39560608
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||| |||  |||||||||||    
T  39560548 gagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgttagggc 39560608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 20139215 - 20139353
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20139215 atgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 20139313  T
Q  117 gagcccgttagggccacgggcagcccgcaaaaaattaaga 156  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  20139314 gagcccgttcgggccacgggcagcccgcaaaaaattaaga 20139353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 22193654 - 22193516
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22193654 atgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 22193556  T
Q  117 gagcccgttagggccacgggcagcccgcaaaaaattaaga 156  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  22193555 gagcccgttcgggccacgggcagcccgcaaaaaattaaga 22193516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 31472601 - 31472486
Alignment:
Q  10 tgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaa 109  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  31472601 tgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttctagggctttttagccaggcccgaaa 31472503  T
Q  110 aagcccggagcccgtta 126  Q
    ||||| |||||||||||    
T  31472502 aagccaggagcccgtta 31472486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 27966858 - 27966762
Alignment:
Q  18 tgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    ||||||||||||||||||||  ||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||    
T  27966858 tgggccggcccgaaagcccgagtaaaatgtagggcttgggcc-taataattgcagcccaaatttttccagggctttttagcccggcccataaaagccc 27966762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 15065930 - 15066040
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  15065930 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 15066028  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  15066029 gcccgttagggc 15066040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 12076761 - 12076616
Alignment:
Q  2 actagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 101  Q
    ||||| ||||| ||||||| ||| |||||||||||| |||||| ||||||| ||| |  |||  || | ||||| ||||||| |||||||||||| ||||    
T  12076761 actagagctgttaaaatggaccg-cccgaaagcccgaataaaatgtagggcctggccgataa--atagcagcccaaattttttcagggctttttaacccg 12076665  T
Q  102 gcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||||||||||||||| || |||||||||| | |||||||| ||| ||||    
T  12076664 gcccgaaaaagcccgaagtccgttagggctaagggcagcctgcagaaaa 12076616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 12272312 - 12272224
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaa 108  Q
    ||||||||||||||||||| |||||| ||||||| ||||||   | ||| | ||||||||||||| ||||||||||||||||||||||||    
T  12272312 gggccggcccgaaagcccgaataaaatgtagggcctgggccgata-aatagcagcccgaattttttcagggctttttagcccggcccgaa 12272224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 10997743 - 10997838
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    |||||| |||||||||||| |||||| | ||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||    
T  10997743 gggccgacccgaaagcccgaataaaatggagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 10997838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 31655637 - 31655511
Alignment:
Q  16 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    |||||||| ||||||||||||| ||||||| ||||| ||||||| ||| ||||  |||||||||   | | |||||||||||||||| ||||||||||||    
T  31655637 aatgggccagcccgaaagcccgaataaaacatagggtttgggcc-taaaaattacagcccgaataaattccgggctttttagcccggtccgaaaaagccc 31655539  T
Q  116 ggagcccgttagggccacgggcagcccg 143  Q
    |  ||||||| ||||  |||| ||||||    
T  31655538 gttgcccgttcgggcttcgggtagcccg 31655511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 3044290 - 3044387
Alignment:
Q  27 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtt 125  Q
    ||||||||||| |||||| | ||||| ||||||  |||||| | ||||||||||||| ||||| ||||||||||||||||||||  |||| ||||||||    
T  3044290 ccgaaagcccgaataaaatgcagggcctgggccg-aataatagcagcccgaattttttcagggttttttagcccggcccgaaaatacccgtagcccgtt 3044387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 11369677 - 11369572
Alignment:
Q  25 gcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccggagcccg 123  Q
    ||||||||||||| |||||| |||| | |||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||   |||||    
T  11369677 gcccgaaagcccgaataaaatgtagagtttgggccg-aataattggagcccgaaatttaaagagggctttttagcccggcccgtaaaagcccttggcccg 11369579  T
Q  124 ttagggc 130  Q
    |||||||    
T  11369578 ttagggc 11369572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 17869316 - 17869271
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17869316 agcccgaattttttcagggttttttagcccggcccgaaaaagcccg 17869271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 29034581 - 29034499
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||||||||  ||| |||||||    
T  29034581 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggc 29034499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 2067187 - 2067247
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  2067187 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 2067247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 4171002 - 4170942
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  4171002 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 4170942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 15068088 - 15068028
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  15068088 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 15068028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 26555285 - 26555226
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttaggg 129  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  ||||||||||    
T  26555285 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttaggg 26555226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 2289981 - 2290025
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||||||||| ||||||| |||  |||||||||||    
T  2289981 agggctttttagcccggccctaaaaagctcggtacccgttagggc 2290025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 2703064 - 2703004
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||||| |  |||||||||||    
T  2703064 gagcccgaattttaatagggctttttagcccggcccttaaaagcccagtacccgttagggc 2703004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 9035167 - 9035107
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||| ||||||  ||||||||||  |||||||||||    
T  9035167 gagcccgaattttaatagggctttttagcacggcccttaaaagcccggtacccgttagggc 9035107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 12577391 - 12577331
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||| |||| |||||||| ||  |||||||||||    
T  12577391 gagcccgaattttaatagggctttttagcccagccctaaaaagcctggtacccgttagggc 12577331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 13835980 - 13836024
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||||||||| ||||||||||   |||||||||||    
T  13835980 agggctttttagcccggccctaaaaagcccgatacccgttagggc 13836024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 15183814 - 15183754
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||   ||||||||||  |||||||||||    
T  15183814 gagcccgaattttaatagggctttttagcccggcctttaaaagcccggttcccgttagggc 15183754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 17547541 - 17547601
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||| ||||||||||||||||  ||||||||||  |||||||||||    
T  17547541 gagcccgaattttaataggactttttagcccggcccttaaaagcccggtacccgttagggc 17547601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 22988222 - 22988178
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  22988222 agggctttttagcccggcccttaaaagcccggtacccgttagggc 22988178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 23800174 - 23800218
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  23800174 agggctttttagcccggcccttaaaagcccggtacccgttagggc 23800218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 29641113 - 29641053
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  29641113 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgatacccgttagggc 29641053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 31511292 - 31511232
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  31511292 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgatacccgttagggc 31511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 7e-59; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 42739481 - 42739335
Alignment:
Q  3 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 102  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  42739481 ctagagctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccgg 42739383  T
Q  103 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  42739382 cccaaaaaagcccggagcccgttcgggccacgggcagcccgcaaaaaa 42739335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 2349696 - 2349819
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||  |||||||| ||| |||||||||| |||||||||||||||||||| |||||||||| |    
T  2349696 gggccagcccgaaagcccgaataaaatgtagggcctgggccg-aataattgcagctcgaatttttc-agggctttttagcccggcccaaaaaagcccgta 2349793  T
Q  119 gcccgttagggccacgggcagcccgc 144  Q
    |||||||  ||| |||||||||||||    
T  2349794 gcccgttcaggctacgggcagcccgc 2349819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 3940661 - 3940767
Alignment:
Q  8 gctgtcaaaatgggccggccc-gaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccg 106  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    |||||||||||||||||||||    
T  3940661 gctgtcaaaatgggccggccccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccg 3940759  T
Q  107 aaaaagcc 114  Q
     |||||||    
T  3940760 taaaagcc 3940767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 30436568 - 30436457
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  30436568 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 30436470  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  30436469 ggcccgttagggc 30436457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 35813537 - 35813426
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  35813537 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 35813439  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  35813438 ggcccgttagggc 35813426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 15243774 - 15243886
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||||||||| |  ||||| ||||||| ||||||  |||||||| |||||||||| || |||||||||||||||||| |||  ||||||||    
T  15243774 atgggccggcccgaaagcctgagtaaaatgtagggcctgggccg-aataattgcagcccgaattctttcagggctttttagcccggaccgttaaagcccg 15243872  T
Q  117 gagcccgttagggc 130  Q
     |||||||| ||||    
T  15243873 tagcccgtttgggc 15243886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 28968204 - 28968319
Alignment:
Q  27 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 126  Q
    |||||| |||| |||||| | ||||| ||||||  |||||| | |||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  28968204 ccgaaaacccgaataaaatgcagggcctgggccg-aataatagaagcctgaattttttcagggctttttagcccggcccaaaaaagcccgtagcccgtta 28968302  T
Q  127 gggccacgggcagcccg 143  Q
    ||||   ||||||||||    
T  28968303 gggctgagggcagcccg 28968319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 9201110 - 9201235
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||| |||||||||||| ||| ||||||||||||| ||||| || |||||||| |||| ||||| || ||| |||||||||||||| ||  |||||||||    
T  9201110 atggaccggcccgaaagtccgaataaaacgtagggtttggg-ccgaataattgcagcctgaattctttcagagctttttagcccggtccataaaagcccg 9201208  T
Q  117 gagcccgttagggccacgggcagcccg 143  Q
     | ||| || |||| | ||||||||||    
T  9201209 taaccctttcgggctaagggcagcccg 9201235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 3654408 - 3654313
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    ||||||| || |||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||| ||||||| ||||||||    
T  3654408 gggccggtccaaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagctcggcccgtaaaagccc 3654313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 29894570 - 29894474
Alignment:
Q  16 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagc 113  Q
    ||||||||||||| |||||||| |||||||||||| ||| || ||||| ||||| |||||||||   | ||||  |||||||||||| ||||||||||    
T  29894570 aatgggccggcccaaaagcccgaataaaacgtaggactt-ggacctaaaaattgcagcccgaataaattcaggattttttagcccggtccgaaaaagc 29894474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 34347100 - 34347002
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta-gggccacgggcagcccgca 145  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||| ||| |||||||||||  ||||||| ||||| |||| ||||||||    
T  34347100 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggggccgcgggtagcccgca 34347002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 40027727 - 40027848
Alignment:
Q  8 gctgtcaaaatgggccggcccgaa-agcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccg 106  Q
    ||||||||||||||||||||||   |||||| |||||   |||||||||||||  ||  |||| ||||||||||||   ||||||||||||||||||||     
T  40027727 gctgtcaaaatgggccggcccgtttagcccgaataaata-tagggcttgggcctaaaatattg-agcccgaattttaatagggctttttagcccggccct 40027824  T
Q  107 aaaaagcccggagcccgttagggc 130  Q
     ||||||||||  |||||||||||    
T  40027825 taaaagcccggtacccgttagggc 40027848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 6142940 - 6142994
Alignment:
Q  62 aataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||| |||| ||||    
T  6142940 aataattgcagcccggattcttccagggctttttagcccggcccgtaaaaacccg 6142994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 957506 - 957567
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcca 132  Q
    ||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||||    
T  957506 agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggcca 957567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 5927122 - 5927182
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  5927122 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 5927182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 6266315 - 6266375
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  6266315 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 6266375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 7433453 - 7433513
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  7433453 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgttagggc 7433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 11202256 - 11202196
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  11202256 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 11202196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 22486860 - 22486816
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  22486860 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 22486816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 24101822 - 24101762
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  24101822 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 24101762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 26098317 - 26098377
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  26098317 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 26098377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 31895009 - 31894949
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  31895009 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 31894949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 37819255 - 37819315
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  37819255 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 37819315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 38231802 - 38231742
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  38231802 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 38231742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 40027611 - 40027567
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||||||||| |||||||||||  |||||||||||    
T  40027611 agggctttttagcccggccctaaaaagcccggtacccgttagggc 40027567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 20823577 - 20823518
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttaggg 129  Q
    |||||||||||||   |||||||||||||||| ||| |||||||||||  ||||||||||    
T  20823577 gagcccgaattttagtagggctttttagcccgaccctaaaaagcccggtacccgttaggg 20823518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 38894759 - 38894820
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    |||||||||||||   |||||||||||||||| ||| ||||||||||   ||||||||||||    
T  38894759 gagcccgaattttaatagggctttttagcccgaccctaaaaagcccgctacccgttagggcc 38894820  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 7161614 - 7161674
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||| |||  ||||||||||  |||||||||||    
T  7161614 gagcccgaattttaatagggctttttagcccgtcccttaaaagcccggtacccgttagggc 7161674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 15041379 - 15041439
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||||||   |||||||||||    
T  15041379 gagcccgaattttaatagggctttttagcccggcccttaaaagcccgatacccgttagggc 15041439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 21412488 - 21412548
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||   ||||||||||  |||||||||||    
T  21412488 gagcccgaattttaatagggctttttagcccggccatcaaaagcccggtacccgttagggc 21412548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 21806980 - 21807040
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||   ||||||||||  |||||||||||    
T  21806980 gagcccgaattttaatagggctttttagcccggccatcaaaagcccggtacccgttagggc 21807040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 29940168 - 29940108
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||| |||| ||||||||||   |||||||||||    
T  29940168 gagcccgaattttaatagggctttttagcccagccctaaaaagcccgctacccgttagggc 29940108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 38895250 - 38895294
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||||| | ||||||||||||    
T  38895250 gggctttttcgcccggcccgataaagcccgaaacccgttagggcc 38895294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 40027090 - 40027046
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| |||| |||||| |||||||| ||||||||||||||    
T  40027090 gggctttttggccctgcccgataaagcccgaagcccgttagggcc 40027046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 41644251 - 41644191
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||| ||||||||||||||||  ||||||||||  |||||||||||    
T  41644251 gagcccgaattttaataggcctttttagcccggcccttaaaagcccggtacccgttagggc 41644191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 41827628 - 41827572
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 126  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||    
T  41827628 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 41827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 44679230 - 44679170
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||| ||  ||||||||||  |||||||||||    
T  44679230 gagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgttagggc 44679170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 7e-59; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 43286381 - 43286235
Alignment:
Q  3 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 102  Q
    |||| |||||||||| |||| ||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  43286381 ctagagctgtcaaaacgggctggcccgagagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccgg 43286283  T
Q  103 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43286282 cccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 43286235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 52464210 - 52464069
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||| || ||||||||||||||| |||    
T  52464210 gctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattacagcccgaatttttcaagagctttttagcccggctcga 52464112  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  52464111 aaaagcccggagtccgttcgggccacgggcagcccgcaaaaaa 52464069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 32767574 - 32767691
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||| ||||||||||||||||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  32767574 gctgtcaaaacgggccggcccgaaagcccgaataaaatatagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccggcccga 32767672  T
Q  108 aaaagcccggagcccgtta 126  Q
    ||||||||||| |||||||    
T  32767673 aaaagcccggaacccgtta 32767691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 3415327 - 3415158
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||                
T  3415327 gctgtcaaaatgggccggcccgaaagcccgaataaaacgtagggcttggg-cctaataattggagcccgaatttttccagggcttttt------------ 3415241  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaattaaga-tgggtcannnnnnnnnggtgtggtgtctgctgggcctgga 196  Q
       ||||||||||||||| |||||||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||    
T  3415240 ---agcccggagcccgttcgggccacgggcagcccgcaaaaaattaagagtgggtca----tttttggtgtggtgtctgctgggcctgga 3415158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 32594047 - 32594171
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| ||||| | ||| ||  |||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| |    
T  32594047 gggccggcccgaaagcccgaataaaatgtaggacctggaccg-aataattgcagcccgaattttttcagggctttttaacccgacccgaaaaagcccgta 32594145  T
Q  119 gcccgttagggccacgggcagcccgc 144  Q
    |||||||   || |||||||||||||    
T  32594146 gcccgttcaagctacgggcagcccgc 32594171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 20034401 - 20034291
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  20034401 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 20034303  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  20034302 gcccgttagggc 20034291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 27870026 - 27870136
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  27870026 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccaaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 27870124  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  27870125 gcccgttagggc 27870136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 51401448 - 51401315
Alignment:
Q  16 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    ||||||||||||||  ||||||  |||||| ||||| |||||| | || ||||  ||||||||||||||||| ||||||||||||||||||||||| |||    
T  51401448 aatgggccggcccgttagcccgagtaaaacttagggtttgggctcaaa-aattccagcccgaatttttccagagctttttagcccggcccgaaaaaaccc 51401350  T
Q  116 ggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    | | |||| | |||| | |||||||||||||||||    
T  51401349 gcaacccgctcgggctaagggcagcccgcaaaaaa 51401315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 44341197 - 44341293
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||| ||||||||||| |||||| ||||||||||||||  |||||||| || ||| ||| ||||||||||||||||||||||||| |||||||||    
T  44341197 gggccggtccgaaagcccgaataaaatgtagggcttgggccg-aataattgcagtccggattcttccagggctttttagcccggcccgtaaaagcccg 44341293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 1705309 - 1705187
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| | ||||  ||||||  |||||| | |||||||||||||| |||||||||||||||||||||||||||| || |    
T  1705309 gggccggcccgaaagcccgaataaaatgcagggtctgggcca-aataatagcagcccgaatttttc-agggctttttagcccggcccgaaaaagctcgta 1705212  T
Q  119 gcccgttagggccacgggcagcccg 143  Q
    ||||||| ||||   ||||||||||    
T  1705211 gcccgttcgggctgagggcagcccg 1705187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 39345835 - 39345946
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  39345835 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 39345933  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  39345934 ggcccgttagggc 39345946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 45522504 - 45522614
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    || |||||||||||||||||| ||||||||       
T  45522504 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagagctttttagcccggcccgtaaaagcccttg 45522602  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  45522603 gcccgttagggc 45522614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 47295568 - 47295678
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| ||||||||| || || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  47295568 gggccggcccgaaagcccgaataaaatgtagggctt-ggaccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 47295666  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  47295667 gcccgttagggc 47295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 17543751 - 17543847
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagccc 115  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||    
T  17543751 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccc 17543847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 19240771 - 19240854
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 101  Q
    |||| |||||||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||||||| |||||| ||||||||||    
T  19240771 atggaccggcccgaaagcccgaataaaatgtagggtttgggcc-taataattgcagcccgaattttttcagggcattttagcccg 19240854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 34859155 - 34859040
Alignment:
Q  27 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 126  Q
    |||||| |||| |||||| | ||||| ||||||  |||||| | |||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  34859155 ccgaaaacccgaataaaatgcagggcctgggccg-aataatagaagcctgaattttttcagggctttttagcccggcccaaaaaagcccgtagcccgtta 34859057  T
Q  127 gggccacgggcagcccg 143  Q
    ||||   ||||||||||    
T  34859056 gggctgagggcagcccg 34859040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 9455440 - 9455330
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||| ||||||||||| |||||| ||||||  ||| |   |||||||| ||||||||||||| ||||||||||||||  |||||||||||| ||| |    
T  9455440 gggccggtccgaaagcccgaataaaatgtagggactggactg-aataattgcagcccgaattttttcagggctttttagctgggcccgaaaaaggccgta 9455342  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  9455341 gcccgttagggc 9455330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 54134591 - 54134485
Alignment:
Q  23 cggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagccc 122  Q
    ||||||||||||||| |||||| ||||||||||||||  |||||||||||||| || ||    ||||||||||||||||||||| ||||||||   ||||    
T  54134591 cggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccaaaattgaagagggctttttagcccggcccgtaaaagcccttggccc 54134493  T
Q  123 gttagggc 130  Q
    ||||||||    
T  54134492 gttagggc 54134485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 951377 - 951472
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    ||||||||||||||||||| |||||| ||| |||||||| || ||||| ||||||||||| ||    ||||||||||||||||||||| ||||||||    
T  951377 gggccggcccgaaagcccgaataaaatgtaaggcttggg-ccgaataagtggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 34030301 - 34030410
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    |||||| |||||||||||| | ||||||||||||||||||| ||| ||| | |||| ||||||   ||||||||||| |||||||||| ||||||||| |    
T  34030301 gggccgacccgaaagcccgaa-aaaacgtagggcttgggcc-taaaaatggcagcctgaatttaaacagggctttttggcccggcccgtaaaagcccgaa 34030398  T
Q  119 gcccgttagggc 130  Q
    |||| |||||||    
T  34030399 gcccattagggc 34030410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 41361259 - 41361341
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagccc 100  Q
    ||||||||||||||||||||| |||||||| | |||||||| ||||| ||||| |||||| |||||  ||||||||||||||||    
T  41361259 atgggccggcccgaaagcccgaataaaacgcatggcttggg-cctaaaaattgcagcccgtattttagcagggctttttagccc 41361341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 2323889 - 2323804
Alignment:
Q  29 gaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    ||||||||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||    
T  2323889 gaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagccc 2323804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 50004729 - 50004862
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    ||||||||||| |||||||||| ||||| | || ||| ||||||| ||||||  || ||| | ||||||||||||  ||||||||||||||| | |||||    
T  50004729 gctgtcaaaataggccggcccggaagcctgaattaaatgtagggcctgggccgaaaaaatagcagcccgaatttt--cagggctttttagcctgccccga 50004826  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccg 143  Q
    ||| ||||  |||||| | |||| | ||||||||||    
T  50004827 aaaggcccacagcccgctcgggctaagggcagcccg 50004862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 1325033 - 1324945
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccg 106  Q
    |||| |||| ||||||| ||| |||||| ||| |||||||||   || |||| ||||||||||||||||||||||||||||||| |||||    
T  1325033 atggaccggaccgaaagtccgaataaaatgtaaggcttgggctgaaa-aattagagcccgaatttttccagggctttttagcccagcccg 1324945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 386
Target Start/End: Complemental strand, 3414999 - 3414964
Alignment:
Q  351 cgcgattccgattctggcagctgaaatcacacaggt 386  Q
    ||||||||||||||||||||||||||||||||||||    
T  3414999 cgcgattccgattctggcagctgaaatcacacaggt 3414964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 16623483 - 16623565
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  16623483 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 16623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 15194522 - 15194582
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  15194522 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 15194582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 16029785 - 16029837
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccg 123  Q
    |||| |||||||| ||||||||||||||||||||| |||||||| | ||||||    
T  16029785 agcctgaattttttcagggctttttagcccggcccaaaaaagccggcagcccg 16029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 56264480 - 56264420
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  56264480 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 56264420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 19474785 - 19474703
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||| ||||||||   |||||||||||||||||||| |||||||||||  ||| |||||||    
T  19474785 tagggcttgggccttaaatattg-agctcgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggc 19474703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 34031115 - 34031162
Alignment:
Q  85 cagggctttttagcccggcccgaaaaagcccggagcccgttagggcca 132  Q
    ||||||||||| | ||||||||| |||||||| |||||||||||||||    
T  34031115 cagggctttttggtccggcccgataaagcccgaagcccgttagggcca 34031162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 56520011 - 56520070
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttaggg 129  Q
    |||||||||||||   |||||||||||||||| ||| |||||||||||  ||||||||||    
T  56520011 gagcccgaattttaatagggctttttagcccgaccctaaaaagcccggtacccgttaggg 56520070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 41882686 - 41882644
Alignment:
Q  89 gctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||    
T  41882686 gctttttggcccggcccgataaagcccgaagcccgttagggcc 41882644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 32767706 - 32767735
Alignment:
Q  127 gggccacgggcagcccgcaaaaaattaaga 156  Q
    ||||||||||||||||||||||||||||||    
T  32767706 gggccacgggcagcccgcaaaaaattaaga 32767735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 39240501 - 39240444
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttag 127  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  ||||||||    
T  39240501 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttag 39240444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 401434 - 401374
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||| ||||||  ||||||||||  |||||||||||    
T  401434 gagcccgaattttaatagggctttttagctcggcccttaaaagcccggtacccgttagggc 401374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 6643370 - 6643310
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||| |||||||||||||||  ||||||||||  |||||||||||    
T  6643370 gagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgttagggc 6643310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 16624059 - 16624103
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  16624059 gggctttttggcccgacccgataaagcccgaagcccgttagggcc 16624103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 26706984 - 26706924
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   | ||||||||||||||||||  ||||||||||  |||||||||||    
T  26706984 gagcccgaattttaatatggctttttagcccggcccttaaaagcccggtacccgttagggc 26706924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 35666626 - 35666686
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||| ||||||||  ||||||||||  |||||||||||    
T  35666626 gagcccgaattttaatagggctttttaccccggcccttaaaagcccggtacccgttagggc 35666686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 41140648 - 41140708
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||| |||||||| ||||||||| |  |||||||||||    
T  41140648 gagcccgaattttaatagggctttttaacccggccctaaaaagccccgtacccgttagggc 41140708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 51435651 - 51435595
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 126  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||    
T  51435651 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 51435595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 54094063 - 54094003
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||| ||||  |||||||||||    
T  54094063 gagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttagggc 54094003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 56114254 - 56114210
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||| || |||||||||||  |||||||||||    
T  56114254 agggctttttagcccggtcctaaaaagcccggtacccgttagggc 56114210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 9e-49; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 46237710 - 46237569
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||| |||||| || ||||||||| ||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  46237710 gctgtcaaaacgggccgacctgaaagcccgaataaaatatagggcttgggcc-taataattgcagcccgaatttttccagggctttttagctcggcccga 46237612  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  46237611 aaaagcccggagcccgttcgggccacgggcagcccgcaaaaaa 46237569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 32057557 - 32057691
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||||||||||||||| |||| |||||||| ||||| ||||||  || |||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  32057557 atgggccggcccgaaatcccgaataaaacgcagggcctgggccgaaa-aattggagcccgaatttttctagggctttttagcccggtccgtaaaagcccg 32057655  T
Q  117 gagcccgttagggccacgggcagcccgcaaaaaatt 152  Q
     | |||||| ||||| |||||||||||| |||||||    
T  32057656 taacccgttcgggcctcgggcagcccgccaaaaatt 32057691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 48470532 - 48470402
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    |||||||||| |||||||| |||||| ||||||  ||||||   | ||| | ||||||||||||| |||| ||||||||||||||||||||||||||| |    
T  48470532 gggccggcccaaaagcccgaataaaatgtagggtctgggccgata-aatagcagcccgaattttttcaggactttttagcccggcccgaaaaagcccgaa 48470434  T
Q  119 gcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||||||| |||| | |||||||||||||||||    
T  48470433 gcccgttcgggctaagggcagcccgcaaaaaa 48470402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 33189029 - 33189139
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  33189029 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 33189127  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  33189128 gcccgttagggc 33189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 12745580 - 12745691
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  12745580 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 12745678  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  12745679 ggcccgttagggc 12745691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 12756569 - 12756680
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  12756569 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 12756667  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  12756668 ggcccgttagggc 12756680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 6501612 - 6501742
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    |||||| |||||||||||| |||||| | ||||| ||||||   | ||| | ||||| ||||||| ||| |||||||||||||||||||||||||||| |    
T  6501612 gggccgacccgaaagcccgaataaaatgcagggcctgggccgata-aatagaagcccaaattttttcagagctttttagcccggcccgaaaaagcccgaa 6501710  T
Q  119 gcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||||||| |||| | |||||||||| ||||||    
T  6501711 gcccgtttgggctaagggcagcccgaaaaaaa 6501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 9660928 - 9660818
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    |||||||||||||| |||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  9660928 gggccggcccgaaatcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 9660830  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  9660829 gcccgttagggc 9660818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 43781272 - 43781162
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    |||| |||||||||||||||| ||||||||       
T  43781272 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggttttttagcccggcccgtaaaagcccttg 43781174  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  43781173 gcccgttagggc 43781162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 45757343 - 45757233
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||  ||||||||       
T  45757343 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccataaaagcccttg 45757245  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  45757244 gcccgttagggc 45757233  T

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Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 42763354 - 42763244
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || |||||||| |||||||| ||    ||||||||||||||||| ||| ||||||||       
T  42763354 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattgaagcccgaaattgaagagggctttttagcccggtccgtaaaagcccttg 42763256  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  42763255 gcccgttagggc 42763244  T

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Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 49229267 - 49229138
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||| ||||||||||||| |||||| | |||| |||||||   | ||| | |||||| |||||| ||||||||||||||||| |||||||||||||| |    
T  49229267 gggccagcccgaaagcccgaataaaatgcagggtttgggccgata-aatagcagcccggattttttcagggctttttagcccg-cccgaaaaagcccgaa 49229170  T
Q  119 gcccgttagggccacgggcagcccgcaaaaaa 150  Q
    ||||||| |||| | ||||||||| |||||||    
T  49229169 gcccgttcgggctaagggcagccctcaaaaaa 49229138  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 45565814 - 45565893
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    |||||||| |||| ||||||||||||||||||||||||||| || | |||||||| |||| | |||||||||| ||||||    
T  45565814 agcccgaaatttttcagggctttttagcccggcccgaaaaaacctgaagcccgttcgggctaagggcagcccgtaaaaaa 45565893  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 31489609 - 31489496
Alignment:
Q  16 aatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    |||||||| ||||||||||||| ||||||| ||||||||||| ||||| ||||  |||||||||   | | |||||||||| ||||||||||||| ||||    
T  31489609 aatgggccagcccgaaagcccgaataaaacatagggcttggg-cctaaaaattacagcccgaataaattccgggctttttaacccggcccgaaaaggccc 31489511  T
Q  116 ggagcccgttagggc 130  Q
    |   |||||||||||    
T  31489510 gttacccgttagggc 31489496  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 45039032 - 45039091
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||| | |||||| ||||    
T  45039032 agcccgaatttttccagggttttttagcccgacccgaaaaagcccgcaacccgtttgggc 45039091  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 15699394 - 15699305
Alignment:
Q  41 aaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    |||| |||||||||||||| ||| ||| | |||||||||||   ||||||||||| ||||||||||| |||| ||| ||||||||||||||    
T  15699394 aaaaggtagggcttgggcc-taaaaatggcagcccgaatttaaacagggctttttggcccggcccgataaagtccgaagcccgttagggcc 15699305  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 4220876 - 4221015
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||| ||||||||||||| ||||||||||| | |||| | ||||| ||||||  || ||| |  |||| |||||||  |||||||||||||| ||||||     
T  4220876 gctgccaaaatgggccggtccgaaagcccgaaaaaaatgcagggcctgggccgaaa-aatggccgcccaaatttttttagggctttttagcctggcccg- 4220973  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgcaaaaa 149  Q
    ||||||||| |||||| | || | | ||||||||||||||||    
T  4220974 aaaagcccgcagcccgctcggactaagggcagcccgcaaaaa 4221015  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 47188665 - 47188574
Alignment:
Q  21 gccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    ||||||| ||||||||| |||||| |||||||||||||   ||||||||||||| ||| ||    ||| ||||||||||||||||| ||||||||    
T  47188665 gccggcctgaaagcccgaataaaatgtagggcttgggc---aataattggagcctgaaattgaagaggactttttagcccggcccgtaaaagccc 47188574  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 1858853 - 1858793
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  1858853 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 1858793  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 17331248 - 17331375
Alignment:
Q  3 ctagggctgtcaaaatgggccggcccgaa-agcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 101  Q
    |||| ||||||||||||||||||||  || |||||| |||||| ||||||| ||| ||   | ||| | ||| | | ||||| ||||||||||||| | |    
T  17331248 ctagagctgtcaaaatgggccggccgtaagagcccgaataaaatgtagggcctggaccgata-aatagcagctcaagttttttcagggctttttaggctg 17331346  T
Q  102 gcccgaaaaagcccggagcccgttagggc 130  Q
    | ||||||||||||| |||||||||||||    
T  17331347 gtccgaaaaagcccgaagcccgttagggc 17331375  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 19406689 - 19406749
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  19406689 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 19406749  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 40412064 - 40412020
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  40412064 gggctttttggcccggcccgataaagcccgaagcccgttagggcc 40412020  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 41310606 - 41310546
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  41310606 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggcacccgttagggc 41310546  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 44922234 - 44922294
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  44922234 gagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 44922294  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 50512058 - 50511998
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||   |||||||||||    
T  50512058 gagcccgaattttaatagggctttttagcccggccctaaaaagcccgctacccgttagggc 50511998  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 5114949 - 5115008
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  5114949 agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 5115008  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 30533392 - 30533486
Alignment:
Q  15 aaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaa 110  Q
    ||||||| ||||||||||||||| |||||| ||||| |||||| ||||| ||||  |||||| ||   |   ||||||||||||||||||||||||    
T  30533392 aaatgggtcggcccgaaagcccgaataaaatgtaggtcttggg-cctaaaaattacagcccggatagattatgggctttttagcccggcccgaaaa 30533486  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 35985592 - 35985510
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| || |||||||||   |||||||||||||||||||| |||||||||||  ||| |||||||    
T  35985592 tagggcttgggccttaaatattg-agtccgaattttaatagggctttttagcccggccctaaaaagcccggtacccattagggc 35985510  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 700524 - 700565
Alignment:
Q  90 ctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    |||||| ||||||||||| ||||||||||||| |||||||||    
T  700524 ctttttggcccggcccgataaagcccggagcctgttagggcc 700565  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 20722232 - 20722292
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||  |||||||| ||  |||||||||||    
T  20722232 gagcccgaattttaatagggctttttagcccggccttaaaaagcctggtacccgttagggc 20722292  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 21088607 - 21088547
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||  |||| |||||||||||||||   ||||||||||  |||||||||||    
T  21088607 gagcccgaattttaacaggcctttttagcccggcctttaaaagcccggtacccgttagggc 21088547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 25422823 - 25422779
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  25422823 gggctttttggcccgacccgataaagcccgaagcccgttagggcc 25422779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 28199276 - 28199320
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  28199276 agggctttttagcccggcccttaaaagcccggtacccgttagggc 28199320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 30723343 - 30723403
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||| |||||||||||||||  ||||||||||  |||||||||||    
T  30723343 gagcccgaattttaatagggttttttagcccggcccttaaaagcccggtacccgttagggc 30723403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 39995521 - 39995477
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  39995521 agggctttttagcccggcccttaaaagcccggtacccgttagggc 39995477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 40412596 - 40412536
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||| |||||||| ||||||||||   |||||||||||    
T  40412596 gagcccgaattttaatagggctttttaacccggccctaaaaagcccgctacccgttagggc 40412536  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 42102233 - 42102293
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||||| |||  |||||||||||    
T  42102233 gagcccgaattttaatagggctttttagcccggcccttaaaagctcggtacccgttagggc 42102293  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 48812617 - 48812557
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||| |||  ||||||||||  |||||||||||    
T  48812617 gagcccgaattttaatagggctttttagcccgacccttaaaagcccggtacccgttagggc 48812557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 48940828 - 48940895
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagccc 115  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||| ||| |||||||||    
T  48940828 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccgaccctaaaaagccc 48940895  T

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Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 38976365 - 38976239
Alignment:
Q  3 ctagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccgg 102  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| | | |||||||||||||||    
T  38976365 ctagagctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttgggcc-taataattgcagcccgaattttccaaaggctttttagcccgg 38976267  T
Q  103 cccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||| |||||||||||||    
T  38976266 cccgaaaaagcccgtagcccgttagggc 38976239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 33908238 - 33908097
Alignment:
Q  10 tgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaa 109  Q
    |||||||||||||||| ||||||||||| |||||||  ||||| ||||||  || |||||||||||||||||||| ||||||||||||||||||||| ||    
T  33908238 tgtcaaaatgggccggtccgaaagcccgaataaaacacagggcctgggccgaaa-aattggagcccgaatttttctagggctttttagcccggcccgtaa 33908140  T
Q  110 aagcccggagcccgttagggccacgggcagcccgcaaaaaatt 152  Q
    ||||||| | |||||| |||| ||||||||||||| |||||||    
T  33908139 aagcccgtaacccgttcgggctacgggcagcccgccaaaaatt 33908097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 9996232 - 9996353
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    |||||||||||||||||||||     
T  9996232 gctgtcaaaatgggccgggccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgt 9996330  T
Q  108 aaaagcccggagcccgttagggc 130  Q
    ||||||||   ||||||||||||    
T  9996331 aaaagcccttggcccgttagggc 9996353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 6955892 - 6955782
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  6955892 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 6955794  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  6955793 gcccgttagggc 6955782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 35038853 - 35038743
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  35038853 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 35038755  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  35038754 gcccgttagggc 35038743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 37206138 - 37206036
Alignment:
Q  20 ggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggag 119  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||||| | ||||| |||||  ||||||||||||| ||||||| ||||||||| ||    
T  37206138 ggccggcccgaaagcccgaataaaacgtagggcttggg-cctaaaaattgcaacccgattttttttagggctttttagctcggcccgtaaaagcccgtag 37206040  T
Q  120 cccg 123  Q
    ||||    
T  37206039 cccg 37206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 38356126 - 38356016
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  38356126 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 38356028  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  38356027 gcccgttagggc 38356016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 1398478 - 1398351
Alignment:
Q  3 ctagggctgtcaaaatgggccggcccgaaagcccg-cataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 101  Q
    |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||| ||| | |||||||||||    |||||||||| |||||    
T  1398478 ctagagctgtcaaaatgggccggcccgaaagcccgaaaaaaaacgtagggcttggg-cctaaaaatggcagcccgaatttaaatagggctttttggcccg 1398380  T
Q  102 gcccgaaaaagcccggagcccgttagggc 130  Q
    ||||| ||||  ||| |||||||||||||    
T  1398379 gcccgtaaaaatccgaagcccgttagggc 1398351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 6238185 - 6238296
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  6238185 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 6238283  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  6238284 ggcccgttagggc 6238296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 6899895 - 6900006
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  6899895 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 6899993  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  6899994 ggcccgttagggc 6900006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 35838110 - 35838221
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  35838110 gggccggcccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 35838208  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  35838209 ggcccgttagggc 35838221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 10642146 - 10642036
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| |||||| |       
T  10642146 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagctcttg 10642048  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  10642047 gcccgttagggc 10642036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 21731717 - 21731827
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||| ||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  21731717 gggccgggccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 21731815  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  21731816 gcccgttagggc 21731827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 4975876 - 4975787
Alignment:
Q  40 taaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||| ||||||| ||||||||| ||| |||||||||| | | ||||||||||||| |||||||||||||||| ||||||||||    
T  4975876 taaaacgtagggtttgggcc-taataattgtagctcgaatttttctaagactttttagcccggtccgaaaaagcccggagtccgttagggc 4975787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 31230247 - 31230352
Alignment:
Q  10 tgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaa 109  Q
    ||||||||||| |||| | ||||||||| |||||||| ||||| ||||||  || |  ||||||||||||||||||||||||||||||||||||||| ||    
T  31230247 tgtcaaaatggaccgggctgaaagcccgaataaaacgcagggcctgggccgaaa-agctggagcccgaatttttccagggctttttagcccggcccgtaa 31230345  T
Q  110 aagcccg 116  Q
    || ||||    
T  31230346 aatcccg 31230352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 4700031 - 4699920
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| |||||| |||||||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  4700031 gggccggcccgaaagcccgaataaaatgtagggtttgggccg-aataattggagcccgaaatttgaatagggctttttagcccggcccgtaaaagccctt 4699933  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  4699932 ggcccgttagggc 4699920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 24477286 - 24477397
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttcc-agggctttttagcccggcccgaaaaagcccgg 117  Q
    ||||||||||||||||||| |||||| |||||||||| |||  ||||||||||||||||| |||    ||||||||||||||||||||| ||||||||      
T  24477286 gggccggcccgaaagcccgaataaaatgtagggcttgagccg-aataattggagcccgaaatttgaagagggctttttagcccggcccgtaaaagccctt 24477384  T
Q  118 agcccgttagggc 130  Q
     ||||||||||||    
T  24477385 ggcccgttagggc 24477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 3436769 - 3436694
Alignment:
Q  72 gcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaa 147  Q
    ||||||||||||  |||||||||||||||||| |||||||||||| |||||||| |||| | ||||||||||||||    
T  3436769 gcccgaatttttttagggctttttagcccggctcgaaaaagcccgaagcccgttcgggctaagggcagcccgcaaa 3436694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 3296166 - 3296231
Alignment:
Q  65 aattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||| |||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||    
T  3296166 aattgcagcccgaattgtttcagggctttttagcccggcccaaaaaagcccggagctcgttagggc 3296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 38986685 - 38986610
Alignment:
Q  40 taaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||||| |||||||||||| | || ||||  |||||||||||||| |||||||||||||||||||||||||||||||    
T  38986685 taaaacttagggcttgggctcaaa-aatttcagcccgaatttttctagggctttttagcccggcccgaaaaagcccg 38986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 20338609 - 20338499
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||| ||| |||||| ||||||| | ||||   | ||| | ||||||||||||| ||||| |||||||||||| ||||||||||||| |    
T  20338609 gggccggcccgaaagtccgaataaaatgtagggcctaggccgata-aatagcagcccgaattttttcagggatttttagcccggtccgaaaaagcccgaa 20338511  T
Q  119 gcccgttagggc 130  Q
    || |||||||||    
T  20338510 gctcgttagggc 20338499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 42860416 - 42860306
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||| ||||| || ||||||||||||||||| ||    |||| |||||||||| ||||| ||||||||       
T  42860416 gggccggcccgaaagcccgaataaaatgtagggtttggg-ccgaataattggagcccgaaattgaagagggttttttagcccagcccgtaaaagcccttg 42860318  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  42860317 gcccgttagggc 42860306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 36866102 - 36866215
Alignment:
Q  2 actagggctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccg 101  Q
    ||||| |||||||||| ||||||   ||||||| || ||||||||||| | ||||| |  ||||| || ||||||||||||| |||||||||||| ||||    
T  36866102 actagagctgtcaaaacgggccgaatcgaaagctcgaataaaacgtagagtttgggtcg-aataagtgcagcccgaattttttcagggctttttatcccg 36866200  T
Q  102 gcccgaaaaagcccg 116  Q
     |||| |||||||||    
T  36866201 acccgtaaaagcccg 36866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 36016288 - 36016384
Alignment:
Q  33 gcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||| |||||| ||||||||||||||  |||||||||||||| || ||    ||||||||||||||||||||| ||||||||   ||||||||||||    
T  36016288 gcccgaataaaatgtagggcttgggccg-aataattggagcccaaaattgaagagggctttttagcccggcccgtaaaagcccttggcccgttagggc 36016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 17085407 - 17085529
Alignment:
Q  27 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 126  Q
    ||||||||||| |||||| ||||||  ||||||  |||||||| |||||||||||| | |||  ||||||| ||  ||| |||||||||| | ||||||     
T  17085407 ccgaaagcccgaataaaatgtagggtctgggccg-aataattgaagcccgaattttccaaggtttttttagtccaacccaaaaaagcccgcaacccgttc 17085505  T
Q  127 gggccacgggcagcccgcaaaaaa 150  Q
    |||| ||||||||| | |||||||    
T  17085506 gggctacgggcagctcacaaaaaa 17085529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 24566246 - 24566328
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||| ||||  |||||||||||    
T  24566246 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagtccggtacccgttagggc 24566328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 24607282 - 24607364
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| |||||| ||||  |||||||||||    
T  24607282 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaagtccggtacccgttagggc 24607364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 26264481 - 26264399
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||  ||| |||| ||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  26264481 tagggcttgggcctaaattattg-agcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 26264399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 17320389 - 17320470
Alignment:
Q  48 agggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||| |||  |||| |||||| |||||   |||||||||||||||||||| |||||||||||  |||||||||||    
T  17320389 agggcttgggccttaaatattg-agcccggattttaatagggctttttagcccggccctaaaaagcccggtacccgttagggc 17320470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 74980 - 75043
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaattt 81  Q
    ||||| ||| ||||||||||| ||||||||||||||||||| ||||| ||||| |||||| ||||    
T  74980 atgggtcggtccgaaagcccgaataaaacgtagggcttggg-cctaaaaattgcagcccgtattt 75043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 20122748 - 20122808
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  20122748 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 20122808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 28759439 - 28759379
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  28759439 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 28759379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 39479386 - 39479446
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   | |||||||||||||||||| |||||||||||  |||||||||||    
T  39479386 gagcccgaattttaatatggctttttagcccggccctaaaaagcccggtacccgttagggc 39479446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 40917956 - 40917897
Alignment:
Q  71 agcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| ||| ||||||||||| |||| |||||||| || ||| |||||||||    
T  40917956 agcccgaattttttcagagctttttagcctggcctgaaaaagctcgaagctcgttagggc 40917897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 17016523 - 17016569
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||    
T  17016523 gagcccgaattttaatagggctttttagcccggccctaaaaagcccg 17016569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 1845459 - 1845532
Alignment:
Q  57 gccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||| ||||||||||| ||||| ||    ||||||||||||||||||||| ||||||||   ||||||||||||    
T  1845459 gcccgaataattggagtccgaaattgaagagggctttttagcccggcccgtaaaagcccttggcccgttagggc 1845532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 17320977 - 17321022
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcca 132  Q
    ||||||||| ||||||||||| |||||| | |||||||||||||||    
T  17320977 gggctttttggcccggcccgataaagcctgaagcccgttagggcca 17321022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 21162763 - 21162679
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggcca 132  Q
    ||||||||||||| |||  |||| |||||||||||    ||||||||||||||||| || ||||||||||   |||||||||||||    
T  21162763 tagggcttgggccttaaatattg-agcccgaatttcaatagggctttttagcccggacctaaaaagcccgctacccgttagggcca 21162679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 37205309 - 37205272
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgt 124  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  37205309 gggctttttagcccggccctaaaaagcccgaagcccgt 37205272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 2466375 - 2466319
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 126  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||    
T  2466375 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgtta 2466319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 7344283 - 7344243
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttag 127  Q
    ||||||||| ||||||||||| |||||||| ||||||||||    
T  7344283 gggctttttggcccggcccgataaagcccgaagcccgttag 7344243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 8320564 - 8320504
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||| ||||||| |||  | |||||||||    
T  8320564 gagcccgaattttaatagggctttttagcccggccctaaaaagctcggtactcgttagggc 8320504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 19647010 - 19646966
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||||||||| ||||||||||   |||||||||||    
T  19647010 agggctttttagcccggccctaaaaagcccgctacccgttagggc 19646966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 15614261 - 15614149
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||||||||||| ||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  15614261 atgggccggcccgaaagcccgaataaaatatagggcttgggcc-taataattgcagcccgaatttttccagggctttttagcccgccccgaaaaagcccg 15614163  T
Q  117 gagcccgttagggc 130  Q
    ||||| ||||||||    
T  15614162 gagcctgttagggc 15614149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 5271064 - 5271199
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||| ||||||||||||||||||| |||||| | ||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||     
T  5271064 gctgtcaaaacgggccggcccgaaagcccgaataaaatgcagggcttgggccgaaa-aattggagcccgaatttttccaggactttttagcccggcccgc 5271162  T
Q  108 aaaagcccggagcccgttagggccacgggcagcccgc 144  Q
    |||| |||| | ||||||||||| |||||||||||||    
T  5271163 aaaaccccgtaacccgttagggctacgggcagcccgc 5271199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 150
Target Start/End: Original strand, 9470828 - 9470957
Alignment:
Q  20 ggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggag 119  Q
    |||||||||||||||||| |||||| |||||| |||||||   | ||| | ||||||||||||| ||||||||||||||||||||||||||| |||| ||    
T  9470828 ggccggcccgaaagcccgaataaaatgtagggtttgggccgata-aatagcagcccgaattttttcagggctttttagcccggcccgaaaaatcccgaag 9470926  T
Q  120 cccgttagggccacgggcagcccgcaaaaaa 150  Q
    | |||| |||| | |||||||||||||||||    
T  9470927 cacgttcgggctaagggcagcccgcaaaaaa 9470957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 20922828 - 20922740
Alignment:
Q  62 aataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggccacgggcagcccgcaaaaaa 150  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  ||| ||| ||||||||| |||||    
T  20922828 aataattgcagcccgaattttttcagggctttttagcccggcccgaaaaagcccgtagcccgttcaggctacgagcagcccgccaaaaa 20922740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 15560676 - 15560566
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  15560676 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 15560578  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  15560577 gcccgttagggc 15560566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 25096307 - 25096417
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  25096307 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 25096405  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  25096406 gcccgttagggc 25096417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 123
Target Start/End: Complemental strand, 38838159 - 38838045
Alignment:
Q  8 gctgtcaaaatgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccga 107  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| ||||| || ||||||||||  | ||||| |||||||| |||      
T  38838159 gctgtcaaaacgggccggcccgaaagcccgaataaaacgtagggcttggg-cctaaaaattgcagtccgaatttttttaaggcttgttagcccgacccat 38838061  T
Q  108 aaaagcccggagcccg 123  Q
    ||||||||| ||||||    
T  38838060 aaaagcccgtagcccg 38838045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 21747420 - 21747529
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  21747420 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 21747518  T
Q  119 gcccgttaggg 129  Q
    |||||||||||    
T  21747519 gcccgttaggg 21747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 29201516 - 29201406
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||| ||||||||||| |||||| ||||||||||||||  ||||||||||||||||| ||    ||||||||||||||||||||| ||||||||       
T  29201516 gggccgggccgaaagcccgaataaaatgtagggcttgggccg-aataattggagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 29201418  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  29201417 gcccgttagggc 29201406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 42730824 - 42730715
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||| ||||||||||| |||||| | ||||||||||||  |||||| | ||||||||||||| ||||||||||||||||| |||| ||||||||| |    
T  42730824 gggccgggccgaaagcccgaataaaatgcagggcttgggccg-aataatagcagcccgaattttttcagggctttttagcccgacccg-aaaagcccgta 42730727  T
Q  119 gcccgttagggc 130  Q
    ||| ||||||||    
T  42730726 gcctgttagggc 42730715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 40000896 - 40000787
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccgga 118  Q
    ||||||||||||||||||| |||||| |||||||||||| || ||||||||| ||||||| ||    ||||||||||||||||||||| ||||||||       
T  40000896 gggccggcccgaaagcccgaataaaatgtagggcttggg-ccgaataattgg-gcccgaaattgaagagggctttttagcccggcccgtaaaagcccttg 40000799  T
Q  119 gcccgttagggc 130  Q
    ||||||||||||    
T  40000798 gcccgttagggc 40000787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 17920791 - 17920886
Alignment:
Q  20 ggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||||||||||||||| | |||||| |||||| |||||||   | ||| | |||| ||||||||  |||||||||||||||||||||||||||||||    
T  17920791 ggccggcccgaaagcctgaataaaatgtagggtttgggccgata-aatagcagcctgaatttttttagggctttttagcccggcccgaaaaagcccg 17920886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 17071325 - 17071256
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 87  Q
    ||||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  17071325 atgggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataatttcagcccgaatttttccag 17071256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 40861136 - 40861035
Alignment:
Q  28 cgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttag 127  Q
    |||||||||| |||||| |||||||||| |||  ||||||||||||||||| ||    |||||||||||||| |||||| ||||||||   |||||||||    
T  40861136 cgaaagcccgaataaaatgtagggcttgagccg-aataattggagcccgaaattgaagagggctttttagcctggcccgtaaaagcccttggcccgttag 40861038  T
Q  128 ggc 130  Q
    |||    
T  40861037 ggc 40861035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 17088323 - 17088255
Alignment:
Q  18 tgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 87  Q
    |||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  17088323 tgggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataattttagcccgaatttttccag 17088255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 17077395 - 17077328
Alignment:
Q  19 gggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 87  Q
    ||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  17077395 gggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataatttcagcccgaatttttccag 17077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 10822369 - 10822287
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||||| ||||| |||||  |||||||||||    
T  10822369 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggccctaaaaaacccggtacccgttagggc 10822287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 31618185 - 31618103
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||| |||  |||| ||||||||||||   |||||||||||||||||| | |||||||||||  |||||||||||    
T  31618185 tagggcttgggccttaaatattg-agcccgaattttaatagggctttttagcccggctctaaaaagcccggtacccgttagggc 31618103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 4564919 - 4565030
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||| |||||| ||| || || |||||| |||||||||| ||| ||| ||||| |||||||| |||||||| | |||||| |||  ||||||||||||||    
T  4564919 atggaccggcctgaacgctcgaataaaatgtagggcttgtgcc-taaaaattgcagcccgaaattttccagag-tttttaacccaacccgaaaaagcccg 4565016  T
Q  117 gagcccgttagggc 130  Q
     ||||||| |||||    
T  4565017 tagcccgtcagggc 4565030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 13247770 - 13247830
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  13247770 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 13247830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 27495925 - 27495985
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  27495925 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 27495985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 30801275 - 30801215
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  30801275 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 30801215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 35439605 - 35439545
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  35439605 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 35439545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 4565034 - 4565068
Alignment:
Q  120 cccgttagggccacgggcagcccgcaaaaaattaa 154  Q
    |||||| ||||||||||||||||||||||||||||    
T  4565034 cccgtttgggccacgggcagcccgcaaaaaattaa 4565068  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 1002558 - 1002514
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||    
T  1002558 agggctttttagcccggcccataaaagcccggtacccgttagggc 1002514  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 1346347 - 1346287
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||| ||||  |||||||||||    
T  1346347 gagcccgaattttaatagggctttttagcccggcccttaaaagtccggtacccgttagggc 1346287  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 2650157 - 2650097
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||| ||  ||||||||||  |||||||||||    
T  2650157 gagcccgaattttaatagggctttttagcccggtccttaaaagcccggtacccgttagggc 2650097  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 10821781 - 10821741
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttag 127  Q
    ||||||||| ||||||||||| |||||||| ||||||||||    
T  10821781 gggctttttggcccggcccgataaagcccgaagcccgttag 10821741  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 13312112 - 13312156
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||| | ||||||||||||||    
T  13312112 gggctttttggcccggcccgataaagcctgaagcccgttagggcc 13312156  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 27552032 - 27552076
Alignment:
Q  86 agggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||||||||| |||||||||||  ||| |||||||    
T  27552032 agggctttttagcccggccctaaaaagcccggtacccattagggc 27552076  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 27554001 - 27554045
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| ||||| || ||||||||||||||    
T  27554001 gggctttttggcccggcccgataaagcacgaagcccgttagggcc 27554045  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 28222955 - 28223015
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||| |  ||||||||||  |||||||||||    
T  28222955 gagcccgaattttaatagggctttttagcccggctcttaaaagcccggtacccgttagggc 28223015  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 30556199 - 30556243
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||    
T  30556199 gggctttttggcccggtccgataaagcccgaagcccgttagggcc 30556243  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 34314322 - 34314366
Alignment:
Q  87 gggctttttagcccggcccgaaaaagcccggagcccgttagggcc 131  Q
    ||||||||| ||||||||||| |||||| | ||||||||||||||    
T  34314322 gggctttttggcccggcccgataaagcctgaagcccgttagggcc 34314366  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 36240821 - 36240761
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||| |||  ||||||||||  |||||||||||    
T  36240821 gagcccgaattttaatagggctttttagcccgacccttaaaagcccggtacccgttagggc 36240761  T

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Target: scaffold0295 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 6177 - 6303
Alignment:
Q  27 ccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgtta 126  Q
    |||| |||||| |||||| ||||||| |||||   |||||||| || |||||||||| |||||||||||||||||||||| ||||| ||| | |||||||    
T  6177 ccgatagcccgaataaaatgtagggcctgggcgg-aataattgcagtccgaattttttcagggctttttagcccggcccgcaaaagtccgtaacccgtta 6275  T
Q  127 gggccacgggcagcccgcaaaaaattaa 154  Q
    |||| |||||||||| | || |||||||    
T  6276 gggctacgggcagcctgaaataaattaa 6303  T

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Target: scaffold0219 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 16730 - 16630
Alignment:
Q  29 gaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagg 128  Q
    ||||||||| |||||| ||||||||||||||  |||||||| |||||||| ||    ||||||||||||||||||||| ||||||||   ||||||||||    
T  16730 gaaagcccgaataaaatgtagggcttgggccg-aataattgtagcccgaaattgaagagggctttttagcccggcccgtaaaagcccttggcccgttagg 16632  T
Q  129 gc 130  Q
    ||    
T  16631 gc 16630  T

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Target: scaffold1449 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1449
Description:

Target: scaffold1449; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 1650 - 1581
Alignment:
Q  17 atgggccggcccgaaagcccgcataaaacgtagggcttgggccctaataattggagcccgaatttttccag 87  Q
    ||||||||||||||||||||| |||||| |||||| ||||| | ||||||||  |||||||||||||||||    
T  1650 atgggccggcccgaaagcccgaataaaatgtagggtttggg-cttaataattttagcccgaatttttccag 1581  T

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Target: scaffold0664 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 7852 - 7792
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  ||||||||||  |||||||||||    
T  7852 gagcccgaattttaatagggctttttagcccggcccttaaaagcccggtacccgttagggc 7792  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 103180 - 103134
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    |||||||||||||   |||||||||||||||||||| ||||||||||    
T  103180 gagcccgaattttaatagggctttttagcccggccctaaaaagcccg 103134  T

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Target: scaffold0661 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0661
Description:

Target: scaffold0661; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 1657 - 1589
Alignment:
Q  47 tagggcttgggccctaataattggagcccgaatttttccagggctttttagcccggcccgaaaaagcccg 116  Q
    ||||||||||||| |||  |||| ||||||||||||    ||||||||||||||||||| ||||||||||    
T  1657 tagggcttgggccttaaatattg-agcccgaattttaattgggctttttagcccggccctaaaaagcccg 1589  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 27666 - 27726
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||| |||||||||  ||||||||||  |||||||||||    
T  27666 gagcccgaattttaatagggctttttcgcccggcccttaaaagcccggtacccgttagggc 27726  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 56273 - 56333
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   ||||||||||||||||||||  |||| |||||  |||||||||||    
T  56273 gagcccgaattttaatagggctttttagcccggcccttaaaatcccggtacccgttagggc 56333  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 231740 - 231680
Alignment:
Q  70 gagcccgaatttttccagggctttttagcccggcccgaaaaagcccggagcccgttagggc 130  Q
    |||||||||||||   |||||||||||||||||||| |||||||| |   |||||||||||    
T  231740 gagcccgaattttaatagggctttttagcccggccctaaaaagcctgctacccgttagggc 231680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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