View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18776_low_37 (Length: 274)
Name: NF18776_low_37
Description: NF18776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18776_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 32875008 - 32874769
Alignment:
| Q |
18 |
ataaggtaatatcgtgcgaacgtatattaacgcaaggcacacaacttaagacaaagtgatttcatatattgaaaatgactaccatcttgaagacaaatta |
117 |
Q |
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| T |
32875008 |
ataaggtaaaatcgtgcgaacgtatattaacgcaaggcacacaacttaagacaaagtgatttcatatattgaaaatgactaccatcttgaagacaaatta |
32874909 |
T |
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| Q |
118 |
caataaatccatgacaataatctatgtcctaataatttcaaaaaatagaatttatgttgtagccacgcttacacgatcattcagttgattctctatcaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32874908 |
caataaatccatgacaataatctatgtcctaataatttcaaaaaatagaatttatgttgtagccacgcttacacgatcattcagttgattctctatcaat |
32874809 |
T |
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| Q |
218 |
tatgtatgatatgggaaacgtattaattcaggaggttctt |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
32874808 |
tatgtatgatatgggaaacgtattaattcaggaggttctt |
32874769 |
T |
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