View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18778_high_4 (Length: 472)

Name: NF18778_high_4
Description: NF18778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18778_high_4
NF18778_high_4
[»] chr6 (15 HSPs)
chr6 (30-286)||(6196939-6197196)
chr6 (29-286)||(2300148-2300406)
chr6 (30-255)||(29077098-29077324)
chr6 (30-255)||(29112070-29112296)
chr6 (30-284)||(1392028-1392274)
chr6 (30-283)||(2238809-2239055)
chr6 (112-287)||(7052287-7052474)
chr6 (30-148)||(28003013-28003134)
chr6 (173-285)||(23929297-23929409)
chr6 (215-284)||(3608052-3608121)
chr6 (227-287)||(10344924-10344984)
chr6 (157-286)||(30878756-30878885)
chr6 (239-284)||(5160950-5160995)
chr6 (158-209)||(25839837-25839888)
chr6 (181-267)||(8634703-8634789)
[»] chr1 (36 HSPs)
chr1 (30-286)||(6303774-6304030)
chr1 (28-287)||(28823880-28824141)
chr1 (30-286)||(730525-730782)
chr1 (30-279)||(47653843-47654093)
chr1 (30-286)||(45759457-45759714)
chr1 (34-287)||(49197759-49198013)
chr1 (30-286)||(19451280-19451527)
chr1 (30-288)||(47781106-47781356)
chr1 (32-288)||(35678758-35679014)
chr1 (30-286)||(35280117-35280365)
chr1 (68-284)||(50192072-50192288)
chr1 (34-284)||(31571845-31572097)
chr1 (28-267)||(49418416-49418647)
chr1 (30-224)||(21222602-21222797)
chr1 (30-284)||(955928-956165)
chr1 (34-212)||(45536443-45536623)
chr1 (34-284)||(48524947-48525178)
chr1 (34-283)||(29556419-29556639)
chr1 (30-199)||(33085441-33085591)
chr1 (157-286)||(1923095-1923224)
chr1 (185-285)||(29209444-29209543)
chr1 (112-284)||(31622268-31622452)
chr1 (83-173)||(47784703-47784793)
chr1 (83-173)||(9577219-9577308)
chr1 (205-278)||(37014327-37014400)
chr1 (215-286)||(47784807-47784878)
chr1 (122-198)||(33026064-33026139)
chr1 (177-283)||(26284304-26284410)
chr1 (181-279)||(42658579-42658677)
chr1 (215-284)||(32588244-32588312)
chr1 (215-284)||(46601403-46601472)
chr1 (82-173)||(46601520-46601613)
chr1 (30-65)||(50192323-50192358)
chr1 (221-281)||(33026152-33026212)
chr1 (177-243)||(27199065-27199131)
chr1 (115-148)||(41599836-41599869)
[»] chr2 (30 HSPs)
chr2 (30-288)||(24776716-24776975)
chr2 (30-287)||(44766296-44766554)
chr2 (30-286)||(35317528-35317786)
chr2 (30-286)||(16270190-16270449)
chr2 (30-284)||(9120534-9120788)
chr2 (30-279)||(14198189-14198438)
chr2 (30-284)||(43848018-43848274)
chr2 (30-284)||(305097-305351)
chr2 (107-287)||(22551372-22551552)
chr2 (30-286)||(21136588-21136835)
chr2 (34-285)||(12407810-12408043)
chr2 (107-279)||(31170101-31170273)
chr2 (30-288)||(32125707-32125947)
chr2 (68-285)||(12419905-12420103)
chr2 (30-148)||(1789855-1789974)
chr2 (158-273)||(1789960-1790075)
chr2 (93-285)||(11997194-11997375)
chr2 (215-286)||(20605528-20605599)
chr2 (30-99)||(31170252-31170322)
chr2 (28-99)||(22551531-22551603)
chr2 (30-136)||(26600979-26601088)
chr2 (175-267)||(13436091-13436183)
chr2 (181-268)||(26600885-26600972)
chr2 (157-286)||(20156343-20156472)
chr2 (157-285)||(34027517-34027645)
chr2 (225-288)||(21988327-21988389)
chr2 (181-244)||(21988247-21988310)
chr2 (185-287)||(1188674-1188776)
chr2 (187-273)||(10125005-10125091)
chr2 (221-287)||(11535697-11535762)
[»] chr7 (43 HSPs)
chr7 (30-285)||(39218882-39219138)
chr7 (30-286)||(40996128-40996385)
chr7 (32-286)||(8078502-8078757)
chr7 (30-286)||(44343000-44343255)
chr7 (28-283)||(7718802-7719058)
chr7 (30-289)||(43580612-43580872)
chr7 (30-283)||(7717871-7718126)
chr7 (30-284)||(977212-977467)
chr7 (34-284)||(43392026-43392277)
chr7 (30-284)||(727828-728082)
chr7 (30-286)||(47879551-47879799)
chr7 (30-286)||(47914629-47914877)
chr7 (30-287)||(12893808-12894056)
chr7 (68-284)||(34695748-34695964)
chr7 (105-288)||(18916441-18916624)
chr7 (25-285)||(30441556-30441809)
chr7 (30-284)||(31401781-31402029)
chr7 (30-279)||(34009414-34009645)
chr7 (84-284)||(20274900-20275090)
chr7 (30-284)||(7113788-7114025)
chr7 (119-204)||(31639126-31639211)
chr7 (85-285)||(3796702-3796913)
chr7 (177-284)||(19811092-19811199)
chr7 (82-273)||(10617260-10617462)
chr7 (30-148)||(43679633-43679742)
chr7 (205-282)||(448236-448313)
chr7 (221-286)||(12964033-12964098)
chr7 (157-285)||(3635094-3635222)
chr7 (219-282)||(835066-835129)
chr7 (219-282)||(1200246-1200309)
chr7 (82-173)||(19251910-19252000)
chr7 (177-268)||(43186964-43187055)
chr7 (83-161)||(9180231-9180309)
chr7 (223-284)||(9180353-9180414)
chr7 (28-65)||(34695675-34695712)
chr7 (157-288)||(40098444-40098574)
chr7 (238-284)||(31639220-31639266)
chr7 (221-286)||(10068952-10069017)
chr7 (87-173)||(10068845-10068930)
chr7 (175-273)||(19252014-19252111)
chr7 (216-278)||(43679777-43679839)
chr7 (82-148)||(44622996-44623062)
chr7 (30-62)||(727738-727770)
[»] chr3 (50 HSPs)
chr3 (30-288)||(33995987-33996246)
chr3 (30-283)||(33807165-33807419)
chr3 (30-279)||(51699054-51699304)
chr3 (30-279)||(20498648-20498898)
chr3 (28-285)||(29448436-29448693)
chr3 (30-286)||(995482-995737)
chr3 (33-288)||(44761615-44761871)
chr3 (30-284)||(6589932-6590187)
chr3 (30-281)||(54625926-54626179)
chr3 (30-286)||(16008097-16008345)
chr3 (34-284)||(19254340-19254581)
chr3 (31-288)||(53928645-53928894)
chr3 (30-286)||(3999147-3999385)
chr3 (68-284)||(35338161-35338377)
chr3 (31-284)||(25418803-25419053)
chr3 (30-273)||(1439525-1439763)
chr3 (30-203)||(3205599-3205762)
chr3 (68-284)||(10138725-10138931)
chr3 (98-273)||(6131020-6131185)
chr3 (30-266)||(52114962-52115181)
chr3 (52-287)||(52080431-52080651)
chr3 (30-282)||(40247160-40247424)
chr3 (82-285)||(6976081-6976295)
chr3 (173-286)||(7319063-7319175)
chr3 (30-139)||(52080331-52080430)
chr3 (82-173)||(23535747-23535838)
chr3 (173-288)||(45135682-45135797)
chr3 (177-288)||(50899249-50899360)
chr3 (177-287)||(46174719-46174829)
chr3 (177-285)||(15492404-15492512)
chr3 (215-283)||(6034692-6034760)
chr3 (83-279)||(12103940-12104148)
chr3 (139-198)||(37820392-37820451)
chr3 (115-174)||(38772465-38772524)
chr3 (235-284)||(12108120-12108169)
chr3 (177-287)||(539338-539445)
chr3 (221-284)||(37820323-37820386)
chr3 (222-273)||(38772534-38772585)
chr3 (177-279)||(5825996-5826097)
chr3 (83-173)||(12105134-12105223)
chr3 (82-143)||(38772399-38772459)
chr3 (215-274)||(28145617-28145677)
chr3 (30-65)||(10138968-10139003)
chr3 (112-163)||(27899695-27899746)
chr3 (115-173)||(6034805-6034863)
chr3 (221-287)||(31645362-31645427)
chr3 (185-287)||(46749965-46750066)
chr3 (235-284)||(39842119-39842168)
chr3 (83-147)||(5825891-5825954)
chr3 (68-100)||(22057989-22058021)
[»] chr4 (55 HSPs)
chr4 (30-286)||(22202485-22202742)
chr4 (30-281)||(25331503-25331757)
chr4 (30-284)||(7007709-7007964)
chr4 (30-282)||(30009296-30009548)
chr4 (30-283)||(3436948-3437204)
chr4 (30-286)||(24130460-24130708)
chr4 (30-287)||(34228158-34228406)
chr4 (30-284)||(28541916-28542161)
chr4 (30-284)||(41321119-41321365)
chr4 (30-284)||(55974989-55975233)
chr4 (30-284)||(49469639-49469886)
chr4 (30-286)||(32952067-32952314)
chr4 (30-285)||(25446513-25446749)
chr4 (28-286)||(31314422-31314662)
chr4 (30-284)||(37046093-37046339)
chr4 (30-284)||(27453708-27453964)
chr4 (30-283)||(41880594-41880831)
chr4 (30-284)||(40536566-40536812)
chr4 (30-284)||(42787043-42787289)
chr4 (37-228)||(1113564-1113756)
chr4 (76-279)||(46635241-46635435)
chr4 (95-273)||(47599235-47599413)
chr4 (105-267)||(39479144-39479306)
chr4 (112-284)||(23465400-23465573)
chr4 (26-284)||(16020490-16020725)
chr4 (34-198)||(53276203-53276358)
chr4 (30-196)||(7246785-7246942)
chr4 (93-287)||(42721861-42722044)
chr4 (177-287)||(44770482-44770592)
chr4 (93-283)||(26340475-26340654)
chr4 (173-288)||(5104924-5105039)
chr4 (68-190)||(1045210-1045323)
chr4 (196-284)||(7246547-7246635)
chr4 (82-288)||(8712251-8712436)
chr4 (30-148)||(7249645-7249754)
chr4 (181-282)||(9163671-9163773)
chr4 (115-285)||(11090684-11090867)
chr4 (177-286)||(20021923-20022032)
chr4 (180-283)||(41581433-41581536)
chr4 (181-283)||(28371399-28371501)
chr4 (235-287)||(12913886-12913938)
chr4 (157-288)||(28099681-28099812)
chr4 (177-260)||(36478837-36478920)
chr4 (205-287)||(45341586-45341667)
chr4 (174-287)||(21309038-21309151)
chr4 (93-173)||(45341502-45341582)
chr4 (177-240)||(16019849-16019912)
chr4 (181-286)||(37369431-37369535)
chr4 (30-65)||(1045139-1045174)
chr4 (216-278)||(7249548-7249610)
chr4 (235-285)||(56444379-56444429)
chr4 (215-267)||(1045321-1045374)
chr4 (235-288)||(36727576-36727629)
chr4 (177-281)||(7853813-7853917)
chr4 (80-135)||(39307010-39307066)
[»] chr8 (32 HSPs)
chr8 (30-284)||(42936794-42937049)
chr8 (30-287)||(5576132-5576389)
chr8 (30-286)||(10391693-10391950)
chr8 (68-287)||(33850823-33851042)
chr8 (30-283)||(24501324-24501578)
chr8 (30-286)||(42937845-42938093)
chr8 (30-283)||(23114771-23115025)
chr8 (30-286)||(42734814-42735052)
chr8 (34-288)||(26373868-26374112)
chr8 (68-281)||(41479646-41479850)
chr8 (30-283)||(43959912-43960156)
chr8 (68-284)||(7506439-7506645)
chr8 (116-284)||(32711129-32711297)
chr8 (30-170)||(2704387-2704529)
chr8 (179-284)||(24214690-24214795)
chr8 (30-147)||(8543752-8543861)
chr8 (177-262)||(33971920-33972005)
chr8 (177-286)||(39189449-39189558)
chr8 (30-108)||(33574725-33574803)
chr8 (215-284)||(37915543-37915612)
chr8 (80-145)||(41070369-41070434)
chr8 (28-65)||(41479573-41479610)
chr8 (177-273)||(29930316-29930412)
chr8 (85-173)||(29976858-29976945)
chr8 (30-65)||(7506681-7506716)
chr8 (82-137)||(13478038-13478093)
chr8 (215-289)||(16365302-16365375)
chr8 (80-169)||(2475534-2475622)
chr8 (235-284)||(4403592-4403641)
chr8 (239-284)||(13477816-13477861)
chr8 (234-283)||(18306589-18306638)
chr8 (112-148)||(33972062-33972098)
[»] chr5 (18 HSPs)
chr5 (30-283)||(7016268-7016522)
chr5 (30-287)||(33655579-33655838)
chr5 (30-286)||(21147573-21147827)
chr5 (28-287)||(849721-849972)
chr5 (36-286)||(5272437-5272688)
chr5 (30-286)||(43319227-43319475)
chr5 (30-288)||(139650-139900)
chr5 (30-284)||(4771768-4772013)
chr5 (30-232)||(32157573-32157775)
chr5 (30-273)||(6461170-6461405)
chr5 (152-284)||(27458680-27458812)
chr5 (181-283)||(9839977-9840079)
chr5 (177-280)||(8408686-8408789)
chr5 (174-284)||(30581995-30582104)
chr5 (181-286)||(28592999-28593104)
chr5 (210-273)||(43319584-43319647)
chr5 (177-265)||(28346554-28346641)
chr5 (221-285)||(7947134-7947197)
[»] scaffold0400 (1 HSPs)
scaffold0400 (30-268)||(14597-14837)
[»] scaffold0365 (1 HSPs)
scaffold0365 (30-268)||(15240-15480)
[»] scaffold0151 (2 HSPs)
scaffold0151 (30-284)||(24533-24789)
scaffold0151 (30-210)||(37124-37306)
[»] scaffold0113 (1 HSPs)
scaffold0113 (30-284)||(37666-37912)
[»] scaffold0002 (2 HSPs)
scaffold0002 (296-472)||(11574-11748)
scaffold0002 (382-428)||(11036-11082)
[»] scaffold0276 (1 HSPs)
scaffold0276 (30-198)||(213-372)
[»] scaffold0287 (1 HSPs)
scaffold0287 (157-285)||(10863-10991)


Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 6197196 - 6196939
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6197196 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 6197097  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  6197096 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttggaaagtcttttaaaa 6196997  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  6196996 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 6196939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 29 - 286
Target Start/End: Complemental strand, 2300406 - 2300148
Alignment:
Q  29 ttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  2300406 ttttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaatttataaaatctgttgaaatctcttgaaatccataaaat 2300307  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||    
T  2300306 catttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtattttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaa 2300207  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  2300206 atcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 2300148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 30 - 255
Target Start/End: Original strand, 29077098 - 29077324
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  29077098 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatcttttgaaatctcttgaaatccataaaatc 29077197  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  29077198 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaataatcttttaaaatcatcaaagtcatcaaaatcttgcaaagccttttaaaa 29077297  T
Q  229 tcctcaagacttttttaaacaaaaatt 255  Q
    ||||||| |||||||||||||||||||    
T  29077298 tcctcaacacttttttaaacaaaaatt 29077324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 30 - 255
Target Start/End: Original strand, 29112070 - 29112296
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  29112070 tttattgagattttgtgaaagagagtgagttatgatatttttttcaattatttcttaaaattcataaaatcttttgaaatctcttgaaatccataaaatc 29112169  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  29112170 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaataatcttttaaaatcatcaaagtcatcaaaatcttgcaaagccttttaaaa 29112269  T
Q  229 tcctcaagacttttttaaacaaaaatt 255  Q
    ||||||| |||||||||||||||||||    
T  29112270 tcctcaacacttttttaaacaaaaatt 29112296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 1392028 - 1392274
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||| |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  1392028 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattgtttcttaaaattcataaaatctattgaaatatcttgaaatccataaaatc 1392127  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||         ||||||||||  |  ||||| ||||||||    
T  1392128 atttcaaatcctttaaaatcttatgaattaaatctattgaaatccttaatagtcttttaaaa---------tcatcaaaatactccaaagtcttttaaaa 1392218  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||||||||||||||||||| ||| ||||||||| |||| ||||||||||    
T  1392219 tcctcaagacttttttaaacaaaaatcgtcatttaaaatcctaatccaatacaccc 1392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 30 - 283
Target Start/End: Original strand, 2238809 - 2239055
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta------------aattatttcttaaaattcataaaatctgttgaaatttcttgaaa 117  Q
    |||||||| |||||||||||||||||||||||||||| |||||             || |||||||||||||||||||||||||||||||| ||||||||    
T  2238809 tttattgaaattttgtgaaagagagtgtgttatgatatttttttcaactttttttcaactatttcttaaaattcataaaatctgttgaaatctcttgaaa 2238908  T
Q  118 tccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaa 217  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||                    
T  2238909 tccataaaatcatttcaaatcctttaaaatcttatgaattaaattcattgaaatccttaatagtcttttaaaatcatcaaagtc---------------- 2238992  T
Q  218 gttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
       ||||||||| || ||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  2238993 ---ttttaaaattctgaagacttttttaaacaaaagttgtcctttaaaatcgtaatccaatacacc 2239055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 112 - 287
Target Start/End: Original strand, 7052287 - 7052474
Alignment:
Q  112 ttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc------------ttaatagtcttttaaaatcatcaaag 199  Q
    |||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||            | ||| |||||| |||||||||||||    
T  7052287 ttgaaatccacaaaatcatttcaaatcctttaaaatcttatgagttaaatccattgaaatccaaattgtaaatctcaattgtctttcaaaatcatcaaag 7052386  T
Q  200 tcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||| |||||| || ||||| ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  7052387 tcattaaaatcatgcaaagtcttttaaaattcttaagacttttttaaacaaaaattgtcctttaaaatcctaattcaatacactccct 7052474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 28003013 - 28003134
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgtt--atgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    |||||||| ||||||||||||| |||||||   |||||| |||||  ||||||||||||||||||||||||| || |||||| |||||||||||||| |     
T  28003013 tttattgatattttgtgaaagacagtgtgtctaatgatatttttttcaattatttcttaaaattcataaaatttgctgaaatctcttgaaatccatagat 28003112  T
Q  127 tcatttcaaatcctttaaaatc 148  Q
    ||||||||||||||||||||||    
T  28003113 tcatttcaaatcctttaaaatc 28003134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 285
Target Start/End: Original strand, 23929297 - 23929409
Alignment:
Q  173 cttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaa 272  Q
    |||||||||||||||||||| | ||||| || ||||||||  ||||| ||||||||| | || |||||||||| |||||||||||| ||||||||| |||    
T  23929297 cttaatagtcttttaaaatcttaaaagttattaaaatctttcaaagtcttttaaaattcacaggacttttttatacaaaaattgtcttttaaaatcctaa 23929396  T
Q  273 ttcaatacacccc 285  Q
    | |||||||||||    
T  23929397 tccaatacacccc 23929409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 3608052 - 3608121
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  3608052 aaagtcttttaaaatcctaaagacttttttaaacaaaaattatcctttaaaatcctaattcaatacaccc 3608121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 10344984 - 10344924
Alignment:
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  10344984 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 10344924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 286
Target Start/End: Original strand, 30878756 - 30878885
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | |||||||||||| | |||||||| ||||||||| | | | |||||| |||| | ||||||||| | |||||||| |    
T  30878756 taaatcccttgaaatccttgagaatcttttaaaatcctaaaagtcattaaaatcttgcataatcttttaatatccactagactttttcatacaaaaatag 30878855  T
Q  257 tcctttaaaatcttaattcaatacaccccc 286  Q
    || ||||||||  ||||  |||||||||||    
T  30878856 tcttttaaaattctaatcaaatacaccccc 30878885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 5160995 - 5160950
Alignment:
Q  239 ttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||| |||||||||||||||||||| |||| ||||||||||    
T  5160995 ttttttaaataaaaattgtcctttaaaatcataatccaatacaccc 5160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 25839837 - 25839888
Alignment:
Q  158 aaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaat 209  Q
    ||||||||||||  | |||||||||| |||||||||||||||||||| ||||    
T  25839837 aaatccattgaatccgttaatagtctgttaaaatcatcaaagtcatccaaat 25839888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 8634789 - 8634703
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||| | ||||||||  |||||||  ||||| ||||||||| | ||||||||||||| | ||||| | || ||||||||    
T  8634789 tcttttaaaatcttaaaagtcattcaaatctttcaaagtcttttaaaattcacaagacttttttatagaaaaaatttcttttaaaat 8634703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 213; Significance: 1e-116; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 6304030 - 6303774
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  6304030 tttattgagattttgtgaaagagagtgtgttatgatattttttcaattattttttaaaattcataaaatctgttgaaatctcttgaaatccataaaatca 6303931  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  6303930 tttcaaatcctttaaaatcttatgaattaaatccattgaaatccttattagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaat 6303831  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  6303830 cctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 6303774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 28 - 287
Target Start/End: Complemental strand, 28824141 - 28823880
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgatagttttt--aaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaa 125  Q
    |||||||||||||||||||||||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  28824141 tttttattgagattttgtgaaagagaatgtgttatgatattttttttaaattatttcttaaaattcataaaatctgttgaaatctcttgaaatcaataaa 28824042  T
Q  126 atcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagtttttta 225  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  28824041 atcatttcaaatcctttaaaatcttataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttacaaagtctttta 28823942  T
Q  226 aaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  28823941 aaatcctcaagacttttttaaacaaaaattgtcctttgaaatattaatccaatacaccccct 28823880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 730525 - 730782
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  730525 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattattttttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 730624  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  730625 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaattatcaaagtcatcaaaatcttgcaaagtcttttaaaa 730724  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    || |||||| ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  730725 tcatcaagatttttttaaacaaaaattatcctttaaaatcctaattcaatacaccccc 730782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 30 - 279
Target Start/End: Complemental strand, 47654093 - 47653843
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  47654093 tttattgagattttgtgaaagagagtgtgttatgatattttttcaattatttcttaaaattcataaaatctattgaaatctcttgaaatccataaaatca 47653994  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  47653993 tttcaaatcctttaaaatcttatgaattaaatccattgaaattcttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaat 47653894  T
Q  230 cctcaagac-ttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    |||||| || ||||||||||||||||||| |||||||||| |||| |||||    
T  47653893 cctcaaaactttttttaaacaaaaattgttctttaaaatcctaatccaata 47653843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 45759714 - 45759457
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||| |||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45759714 tttattgagattttgtgaaagagaatgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 45759615  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  45759614 atttcaaatcctttaaaatcttatgaattaaattcattgaattccttaatagtcttttaaaatcatcaaagtcatcaaaatgttgcaaagtcttttaaaa 45759515  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||| ||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  45759514 tcctcaaaactttttcaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 45759457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 34 - 287
Target Start/End: Complemental strand, 49198013 - 49197759
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcattt 132  Q
    |||||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  49198013 ttgagattttgtgaaatagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatatgttgaaatctcttgaaatccataaaatcattt 49197914  T
Q  133 caaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcct 232  Q
    |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  49197913 caaatcctttaaaatcttatgaattaaatctattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaattttgcaaagtcttttaaaatcct 49197814  T
Q  233 caagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    ||| |||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  49197813 caaaacttttttaaacaaaaattgtcttttaaaatcctaatccaatacaccccct 49197759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 19451527 - 19451280
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||          ||||||||||||||||||    
T  19451527 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatct----------cttgaaatccataaaatc 19451438  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  19451437 atttcaaatcctttaaaatcttttgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 19451338  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  19451337 tcctcaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccccc 19451280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 30 - 288
Target Start/End: Original strand, 47781106 - 47781356
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||          |||||||||||| |||||||    
T  47781106 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaat----------ttcttgaaatccttaaaatc 47781195  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| ||||||||    
T  47781196 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaaccctgcaaagtcttttaaaa 47781295  T
Q  229 tcctcaagacttttttaaac-aaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    |||||||||||||||||||| ||||||| || ||||||||| |||| ||||||||||||||    
T  47781296 tcctcaagacttttttaaacaaaaaattatcttttaaaatcctaatccaatacacccccta 47781356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 32 - 288
Target Start/End: Complemental strand, 35679014 - 35678758
Alignment:
Q  32 tattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    |||||| |||||||||||||||||||||||||||| |||||   |||||||| |||||||| ||||||||||||||||| ||||||||||| | ||||||    
T  35679014 tattgaaattttgtgaaagagagtgtgttatgatatttttttttaattattttttaaaatttataaaatctgttgaaatctcttgaaatccttcaaatca 35678915  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| ||| |||||    
T  35678914 ttttaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctacaaagtctttcaaaat 35678815  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    |||||||||  ||||||||||||||| ||| |||||||| |||| ||||||||||||||    
T  35678814 cctcaagac--ttttaaacaaaaattatccgttaaaatcctaatccaatacacccccta 35678758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 35280117 - 35280365
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||| ||||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||          ||||||||||||||||||    
T  35280117 tttatagagattttgtgaaagagagtgtgttatgatatttttttcaattattttttaaaattcataaaatct----------cttgaaatccataaaatc 35280206  T
Q  129 atttcaaatcctttaaaatcgtataaattaaa-tccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| |||| ||||| |||||||||||| ||||| |||||||    
T  35280207 atttcaaatcctttaaaatcttatgaattaaaatccattgaaatccttaatagtcttttaaattcataaaagtaatcaaaatcttgcaaagtcttttaaa 35280306  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  35280307 atcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 35280365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 68 - 284
Target Start/End: Complemental strand, 50192288 - 50192072
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  50192288 tttttcaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatccttttaaatcttatgaattaaatccattg 50192189  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||| | |||||||||||||||| | |||||||||    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  50192188 aaatccttaataatattttaaaatcatcaaattaatcaaaatccatcaaagtcttttaaaatccttaagacttttttaaacaaaaattgtcctttaaaat 50192089  T
Q  268 cttaattcaatacaccc 284  Q
    | |||| ||||||||||    
T  50192088 cctaatccaatacaccc 50192072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 34 - 284
Target Start/End: Complemental strand, 31572097 - 31571845
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatt 131  Q
    ||||||||||||||||||| ||||||||||||| |||||   |||||||| |||||||||||||||| ||| ||||| | ||||||||||||||||||||    
T  31572097 ttgagattttgtgaaagagggtgtgttatgatattttttttcaattattttttaaaattcataaaatttgtggaaatcttttgaaatccataaaatcatt 31571998  T
Q  132 tcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcc 231  Q
    ||||||||||||||||| ||  ||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| |  ||||| ||||||||| |    
T  31571997 tcaaatcctttaaaatcttactaattaaatccattgaaatctttaacagtcttttaaaatcatcaaagttatcaaaatcctccaaagtcttttaaaattc 31571898  T
Q  232 tcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||| |||||||||||||||||||||||||||||||  ||||  |||||||||    
T  31571897 tcaaaacttttttaaacaaaaattgtcctttaaaattctaatctaatacaccc 31571845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 28 - 267
Target Start/End: Original strand, 49418416 - 49418647
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    |||||||  |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  49418416 tttttatcaagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgtaatctcttgaaatccataaaa 49418515  T
Q  127 tcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaa 226  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         ||||||||||| |  ||||| ||||||    
T  49418516 tcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatccttcaaagtcttttaa 49418606  T
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  49418607 aatcctcaagatttttttaaacaaaaattatcctttaaaat 49418647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 30 - 224
Target Start/End: Original strand, 21222602 - 21222797
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||| ||||||||||||||||||||| |||||  |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  21222602 tttattgagattttgcgaaagagagtgtgttatgatatttttttcaattattttttaaaattcataaaatatgttgaaatctcttgaaatccataaaatc 21222701  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagtttttt 224  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  21222702 atttcaaatcctttaaaatcttattaattaaatccattgaaatccttaatagtcttttaaaatcatcaaaatcatcaaaatcttgcaaagtatttt 21222797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 955928 - 956165
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||                       
T  955928 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttgaaat------------------- 956008  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  956009 cattttaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaa 956108  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||| ||||||||||    
T  956109 atcctcaagacttttttaaacaaaaattgtcttttaaaattctaatccaatacaccc 956165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 34 - 212
Target Start/End: Original strand, 45536443 - 45536623
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatt 131  Q
    ||||||||||||||||||||||||||||||||| |||||   | ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  45536443 ttgagattttgtgaaagagagtgtgttatgatattttttttcagttatttcttaaaattcataaaatctgttgaaatctctttaaatccagaaaatcatt 45536542  T
Q  132 tcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatctt 212  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  45536543 tcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtattttaaaatcatcaaagtcataaaaatctt 45536623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 34 - 284
Target Start/End: Original strand, 48524947 - 48525178
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttc 133  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||      ||||   ||||||||||||||| ||||||||||||||||||||||||    
T  48524947 ttgagattttgtgaaagagaatgtgttatgata-tttttcaattatt------aatt---aaaatctgttgaaatctcttgaaatccataaaatcatttc 48525036  T
Q  134 aaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctc 233  Q
    ||||||||||||||| ||| ||||||||| |||||||| ||||||||||||||||||         ||||||||||| || ||| | |||||||||||||    
T  48525037 aaatcctttaaaatcttatgaattaaatctattgaaattcttaatagtcttttaaaa---------tcatcaaaatcctgcaaaatcttttaaaatcctc 48525127  T
Q  234 aagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||| | |||||||||||||||| |||||||||||| |||| ||||||||||    
T  48525128 aagtcatttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 48525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 34 - 283
Target Start/End: Original strand, 29556419 - 29556639
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcattt 132  Q
    ||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||| |||||||||| ||||||| ||||    
T  29556419 ttgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttaaaatctcttgaaatctataaaataattt 29556518  T
Q  133 caaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcct 232  Q
     |||| ||||||| || |||||||||||         ||||||||||||||||||||||| ||||| | ||                    |||||| ||    
T  29556519 aaaatactttaaa-tcttataaattaaa---------atccttaatagtcttttaaaatcttcaaaattat--------------------taaaattct 29556588  T
Q  233 caagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  29556589 caagacttttttaaacaaaaattgttctttaaaatcctaattcaatacacc 29556639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 33085591 - 33085441
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgata-gtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||          ||||||||||||||         
T  33085591 tttattgagattttgtgaaagagagtgtgttatgatatattttttaattatttcttaaaattcataaaatc----------tcttgaaatccata----- 33085507  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaag 199  Q
         ||||||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  33085506 -----aaatcctttaaaatcttatgaattaaaactattgaaatccttaatagtcttttaaaatcatcaaag 33085441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 157 - 286
Target Start/End: Complemental strand, 1923224 - 1923095
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | |||||||||||| | |||||||| ||||||||| | | | ||||||||||| | ||||||||| | |||||||| |    
T  1923224 taaatcccttgaaatccttgagaatcttttaaaatcctaaaagtcattaaaatcttgcataatcttttaaaatccactagactttttcatacaaaaatag 1923125  T
Q  257 tcctttaaaatcttaattcaatacaccccc 286  Q
    || ||||||||| |||| ||||||||||||    
T  1923124 tcttttaaaatcctaatccaatacaccccc 1923095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 29209444 - 29209543
Alignment:
Q  185 ttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||| ||| |||| |||||| || ||||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||||  |||||||||    
T  29209444 ttaaaatcatgaaaatcattaaaatcatgcaaagtcttttaaaatccttaaga-ttttttaaacaaaaattgtcctttaaaatcctaatctaatacaccc 29209542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 284
Target Start/End: Complemental strand, 31622452 - 31622268
Alignment:
Q  112 ttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc------------ttaatagtcttttaaaatcatcaaag 199  Q
    ||||||| |||||||||||||||||| | |||||||| ||| | ||||||| ||||||||||            | ||||||||||||||||||||||||    
T  31622452 ttgaaattcataaaatcatttcaaattcattaaaatcttatgagttaaatctattgaaatccaaattgtaaatctgaatagtcttttaaaatcatcaaag 31622353  T
Q  200 tcatcaaaatcttgtaaagttttttaaaatcc-tcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    | ||||||||| |  ||||| ||||||||||| ||| |||||||||||| ||| ||| | |||||||||| ||| |||||||||||    
T  31622352 taatcaaaatcctacaaagtcttttaaaatccttcaggacttttttaaataaagatttttctttaaaatcctaa-tcaatacaccc 31622268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 47784703 - 47784793
Alignment:
Q  83 ttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    |||||||||||||||||| ||||||| |  | ||||||||||||||||||||||| |||||||||| ||| |  |||||||||||||||||    
T  47784703 ttaaaattcataaaatcttttgaaatcttataaaatccataaaatcatttcaaattctttaaaatcttatgatctaaatccattgaaatcc 47784793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 9577308 - 9577219
Alignment:
Q  83 ttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    |||||||||||||||| | ||||||| |  | |||||||||||||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  9577308 ttaaaattcataaaatattttgaaatcttat-aaatccataaaatcattttaaatcctttaaaatcttataatgtaaatccattgaaatcc 9577219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 37014400 - 37014327
Alignment:
Q  205 aaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaat 278  Q
    |||||| || ||||| |||||||||||| |||||||||||||||||||||||||||| |||||| |||| ||||    
T  37014400 aaaatcatgcaaagtcttttaaaatccttaagacttttttaaacaaaaattgtccttcaaaatcctaatccaat 37014327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 47784807 - 47784878
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||||||||||| |  | ||||||||||||    
T  47784807 aaagtcttttaaaatccataagacttttttaaacaaaaattgtcctttaaaatcctggtccaatacaccccc 47784878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Original strand, 33026064 - 33026139
Alignment:
Q  122 taaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaa 198  Q
    ||||||||||| ||||||||||||||  | | ||||||||||||||||||| |  ||||||||||||||||||||||    
T  33026064 taaaatcattt-aaatcctttaaaattttttgaattaaatccattgaaatcgtggatagtcttttaaaatcatcaaa 33026139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 26284304 - 26284410
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||| | ||||| || ||||||||| ||||| || |||||| | ||||| ||||||  | ||||| |||| ||||||| | |||||||    
T  26284304 atagtcttttaaaatcttaaaagtaattaaaatcttgcaaagtcttataaaatgcacaagatttttttttaaaaaaaatgtcttttaaaaacctaattca 26284403  T
Q  277 atacacc 283  Q
    |||||||    
T  26284404 atacacc 26284410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 42658579 - 42658677
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    |||||||||||| | ||||||||  |||||||| | ||| ||||||||||| | ||||||||| |  ||||||||||| ||||||||| |||| |||||    
T  42658579 tcttttaaaatcttaaaagtcattgaaatcttgcatagtcttttaaaatccactagactttttcatgcaaaaattgtcttttaaaatcctaatccaata 42658677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 32588312 - 32588244
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||| |||||||||||| |||||||||||||||||||||| || ||||| ||| |||| ||||||||||    
T  32588312 aaagtcttttaaaatcct-aagacttttttaaacaaaaattatcttttaagatcctaatccaatacaccc 32588244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 46601472 - 46601403
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||| ||||||||| ||||| |||| ||||    
T  46601472 aaagtctttcaaaatcttcaagacttttttaaataaaaattgtcttttaaaatcctaattgaatataccc 46601403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 46601613 - 46601520
Alignment:
Q  82 cttaaaattcataaaatctgttgaaat-ttcttg-aaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    ||||||||| ||||||||| ||||||| || | | |||| ||||||||||||||||||||||||||||  ||| |  |||||||||||||||||    
T  46601613 cttaaaattaataaaatcttttgaaatcttatagtaaattcataaaatcatttcaaatcctttaaaattttatgacgtaaatccattgaaatcc 46601520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 50192358 - 50192323
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgat 65  Q
    ||||||||||||||||||||||||||||||||||||    
T  50192358 tttattgagattttgtgaaagagagtgtgttatgat 50192323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 33026152 - 33026212
Alignment:
Q  221 ttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaataca 281  Q
    ||||||||| ||||| |   |||||||||||||||||||||||||||| |||| |||||||    
T  33026152 ttttaaaattctcaaaaaaattttaaacaaaaattgtcctttaaaatcctaatccaataca 33026212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 27199065 - 27199131
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttt 243  Q
    |||||||||||||||| | |||||||| ||||||||| | ||| ||| ||||||| | |||||||||    
T  27199065 atagtcttttaaaatcttaaaagtcattaaaatcttgcatagtctttcaaaatccactagacttttt 27199131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 41599869 - 41599836
Alignment:
Q  115 aaatccataaaatcatttcaaatcctttaaaatc 148  Q
    ||||||||||||||||||||||||||| ||||||    
T  41599869 aaatccataaaatcatttcaaatccttcaaaatc 41599836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 30 - 288
Target Start/End: Original strand, 24776716 - 24776975
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  24776716 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctcttgaaatctcttgaaatccataaaatc 24776815  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  24776816 atttcaaatcctttaaaatcttataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 24776915  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  24776916 tcctcaagacttttttaaagaaaaattgtcctttaaaatcctaatccaatacacccccta 24776975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 30 - 287
Target Start/End: Original strand, 44766296 - 44766554
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||    
T  44766296 tttattgagattttgtgaaagaaagtgtgttatgatatttttttcaattatttcttaaaatttataaaatcagttgaaatctgttgaaatccataaaatc 44766395  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  44766396 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaaatcttttaaaa 44766495  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  44766496 tcctcaagacttttttaaacaaaaattgtcttttaaaatcctaattcaatacaccccct 44766554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 35317528 - 35317786
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  35317528 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttgaaatctgttgaaatccataaaat 35317627  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  ||||| |||||||    
T  35317628 catttcaaatcctttaaaatcttattaattaaatccattgaaatccttaatagttttttaaaatcatcaaagtaatcaaaatcttacaaagtcttttaaa 35317727  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  35317728 atcctcaatacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 35317786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 16270190 - 16270449
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16270190 tttattgagattttgtgaaagagagtgcgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 16270289  T
Q  129 atttcaaatcctttaaaatcgtataaattaaa-tccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  16270290 atttcaaattctttaaaatcttatgaattaaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaa 16270389  T
Q  228 atcctcaagactttttt-aaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||| ||| ||||||| |||||||||||| |||| ||||||||||||    
T  16270390 atcctcaagacttttttaaaaaaaaaattatcctttaaaatcctaatccaatacaccccc 16270449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 9120534 - 9120788
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| |||| |||||||||| |||||||||||||| ||| |    
T  9120534 tttattgagattttgtgaaagagagtgtgttgtgatattttttcaattatttcttaaaattcacaaaacctgttgaaatctcttgaaatccatacaatta 9120633  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||| |||||||||    
T  9120634 tttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaattatcaaaatcatcaaaatctttaaaagtcttttaaaat 9120733  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||||||||||||||||||| |||||||||||| ||||  |||||||||    
T  9120734 cctcaagacttttttaaacaaaaattatcctttaaaatcctaatctaatacaccc 9120788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 30 - 279
Target Start/End: Complemental strand, 14198438 - 14198189
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||||||||||||||||||  |||||||||||| |||||   ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  14198438 tttattgagattttgtgaaagag--tgtgttatgatatttttttctaattatttcttaaaattcataaaatctattgaaatcttttgaaatccataaaat 14198341  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  14198340 catttcaaatcctttaaaatcttatgaattaaatccattaaaatccttaatagtcttttaaaatcatcaaagtcatcaaaattttgtaaagtcttttaaa 14198241  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||| |||||    
T  14198240 atcctcaaaacttttttaaacaaaaattgttctttaaaatcctaatccaata 14198189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 43848018 - 43848274
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||| | |||||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||||| |||||| ||||||||||||||| ||    
T  43848018 tttatttaaattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgatgaaatctcttgaaatccataatat 43848117  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  43848118 catttcaaatcctttaaaatcttatgaattaaatctattgaaatccttaatagtcttttaaaatcatctaagtcatcaaaatcctgtaaagtcttttaaa 43848217  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    || ||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||    
T  43848218 attctcaagatttttttaaacaaaaattgtcttttaaaatcataatccaatacaccc 43848274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 305351 - 305097
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatag-tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||| | ||||||||||  ||||| ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||    
T  305351 tttattgagattttgtgaaagagattatgttatgatatctttttcaattatttcgtaaaattcataaaatccgttgaaatctcttgaaatccataaaatc 305252  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | || ||||| ||||||||    
T  305251 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcttcaaagttatcaaaaccctgcaaagtcttttaaaa 305152  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||    
T  305151 tcctcaagatttttttaaacaaaaattgt-ctttaaaatcctaatccaatacaccc 305097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 107 - 287
Target Start/End: Complemental strand, 22551552 - 22551372
Alignment:
Q  107 atttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaa 206  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22551552 atttcttaaaattcataaaatcatttcaaatcctttaaaatcttataaattaaatccattgaaatccttaatggtcttttaaaatcatcaaagtcatcaa 22551453  T
Q  207 aatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22551452 aatcttgcaaagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaatccaatacaccccct 22551372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 21136835 - 21136588
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||| |||||||||||||||| |||||  |||||||| | ||||||||||||||||||||||||          || |||||||    
T  21136835 tttattgagattttgtgaaaaagagtgtgttatgatatttttttcaattatttttaaaaattcataaaatctgttgaaat----------ccttaaaatc 21136746  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||    
T  21136745 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctacaaagtcttttaaaa 21136646  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||| ||||||||    
T  21136645 tcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaaaacaccccc 21136588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 34 - 285
Target Start/End: Original strand, 12407810 - 12408043
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcattt 132  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||          |||||||||||||||||    
T  12407810 ttgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttga----------aatccataaaatcattt 12407899  T
Q  133 caaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcct 232  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||| ||||||||||||    
T  12407900 caaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatcttgcaaagtcttttaaaatcct 12407990  T
Q  233 caagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
    ||||||||||||||||||||||| |||||||||||| |||| |||||||||||    
T  12407991 caagacttttttaaacaaaaattatcctttaaaatcctaatccaatacacccc 12408043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 107 - 279
Target Start/End: Complemental strand, 31170273 - 31170101
Alignment:
Q  107 atttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaa 206  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31170273 atttcttaaaattcataaaatcatttcaaatcctttaaaatcttatgaattaaatctattgaaatccttaatagtcttttaaaatcatcaaagtcatcaa 31170174  T
Q  207 aatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    ||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  31170173 aatcttgcaaagtcttttaaaatcctcaagactttttaaaacaaaaattgtcctttaaaatcctaatccaata 31170101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 30 - 288
Target Start/End: Original strand, 32125707 - 32125947
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||| ||||| |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||                   |    
T  32125707 tttattgaaattttatgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctcttgaaat-------------------c 32125787  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |  ||||| ||||||||    
T  32125788 atttcaaatcctttaaaatcttatgaattaaatctattgacatccttaatagtcttttaaaatcatcaaagtcatcaaaattctacaaagtcttttaaaa 32125887  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  32125888 tcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacacccccta 32125947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 68 - 285
Target Start/End: Original strand, 12419905 - 12420103
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  12419905 tttttcaattatttcttaaaattcataaaatctgttga----------aatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattg 12419994  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||||||||||||||         |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  12419995 aaatccttaatagtcttttaaaa---------tcatcaaaatcttgcaaagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaat 12420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 1789855 - 1789974
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  1789855 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaacc 1789954  T
Q  129 atttcaaatcctttaaaatc 148  Q
    ||||||||||||||||||||    
T  1789955 atttcaaatcctttaaaatc 1789974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 158 - 273
Target Start/End: Original strand, 1789960 - 1790075
Alignment:
Q  158 aaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgt 257  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  1789960 aaatcctttaaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttacaaagtcttttaaaatcctcaagacttttttaaacaaaaattgt 1790059  T
Q  258 cctttaaaatcttaat 273  Q
    ||||||||||| ||||    
T  1790060 cctttaaaatcctaat 1790075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 285
Target Start/End: Complemental strand, 11997375 - 11997194
Alignment:
Q  93 taaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatc 192  Q
    |||||||| ||||||| |  | |||||||||||||| ||||||||||||||||||| ||| |  ||||||| ||||||||| |          |||||||    
T  11997375 taaaatcttttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatccat----------taaaatc 11997286  T
Q  193 atcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
    || |||||||| |||||| || ||||| |||||||||||| || ||||||| ||||||||||| |||||||||||| |||| |||||||||||    
T  11997285 atgaaagtcattaaaatcatgcaaagtcttttaaaatccttaaaacttttt-aaacaaaaattatcctttaaaatcataatccaatacacccc 11997194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 20605528 - 20605599
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  20605528 aaagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccccc 20605599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 31170322 - 31170252
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgata-gtttttaaattatttcttaaaattcataaaatc 99  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  31170322 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatc 31170252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 22551603 - 22551531
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgata-gtttttaaattatttcttaaaattcataaaatc 99  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  22551603 tttttattgagattttgcgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatc 22551531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 26601088 - 26600979
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatag---tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    |||||||||||||||||||||||| || ||| ||||     ||||| |||||||||||||||||||||||||||| |||||| | || |||| |||||||    
T  26601088 tttattgagattttgtgaaagagaatgcgttttgatcccttttttttaattatttcttaaaattcataaaatctgatgaaatcttttaaaattcataaaa 26600989  T
Q  127 tcatttcaaa 136  Q
    ||||||||||    
T  26600988 tcatttcaaa 26600979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 175 - 267
Target Start/End: Complemental strand, 13436183 - 13436091
Alignment:
Q  175 taatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    ||||||| |||||||||||| |||||||| |||||| | |||| |||||||||| | | ||||||||||||||||||| || |||||||||||    
T  13436183 taatagttttttaaaatcatgaaagtcattaaaatcctataaatttttttaaaaccttgaagacttttttaaacaaaatttatcctttaaaat 13436091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 26600972 - 26600885
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatc 268  Q
    ||||||||||| |||||| ||||  |||||||| ||| | || |||||||||||||| ||||||||||||||||| ||||||||||||    
T  26600972 tcttttaaaataatcaaaatcatggaaatcttgcaaaatcttgtaaaatcctcaagatttttttaaacaaaaattatcctttaaaatc 26600885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 157 - 286
Target Start/End: Complemental strand, 20156472 - 20156343
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | |||||||||||| | |||||||| ||||||||  | | | ||||||||||  | ||||||||| | |||||||| |    
T  20156472 taaatcccttgaaatccttgagaatcttttaaaatcctaaaagtcattaaaatcttacataatcttttaaaatctactagactttttcatacaaaaatag 20156373  T
Q  257 tcctttaaaatcttaattcaatacaccccc 286  Q
    || ||||||||| |||| ||||||||||||    
T  20156372 tcttttaaaatcctaatccaatacaccccc 20156343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 34027645 - 34027517
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | |||||||||||| | |||||||| ||||||||| | | | ||||||||| | | ||| ||||| | ||||||||      
T  34027645 taaatcccttgaaatccttgagaatcttttaaaatcctaaaagtcattaaaatcttgcataatcttttaaaattcactagattttttcatacaaaaataa 34027546  T
Q  257 tcctttaaaatcttaattcaatacacccc 285  Q
    || ||||||||| ||||  ||||||||||    
T  34027545 tcttttaaaatcctaatcaaatacacccc 34027517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 21988327 - 21988389
Alignment:
Q  225 aaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||  |||| |||||||||||||    
T  21988327 aaaatccacaagacttttt-atacaaaaattgtcctttaaaatccaaattgaatacacccccta 21988389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 21988247 - 21988310
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagactttttt 244  Q
    |||||||||||| | |||||||| ||||||||  ||||| ||||||||||| ||| ||||||||    
T  21988247 tcttttaaaatcttaaaagtcattaaaatctttcaaagtcttttaaaatccacaacactttttt 21988310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 1188776 - 1188674
Alignment:
Q  185 ttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||| | ||||||||  |||||||| | | | ||||||||| |   ||||||||| | ||||||||| || ||||||||| |||| ||||||||||    
T  1188776 ttaaaatcttaaaagtcattcaaatcttgcataatcttttaaaattcattagactttttcatacaaaaattttcttttaaaatcctaatccaatacaccc 1188677  T
Q  285 cct 287  Q
    |||    
T  1188676 cct 1188674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 10125091 - 10125005
Alignment:
Q  187 aaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    |||||||| |||||||| |||||| |  ||| | |||||||||  |  | |||||||||| ||||||||||||||||||||| ||||    
T  10125091 aaaatcatgaaagtcattaaaatcctacaaaatcttttaaaatatttgaaacttttttaagcaaaaattgtcctttaaaatcctaat 10125005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 11535697 - 11535762
Alignment:
Q  221 ttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||||||| |||||||||||||   ||||| | ||| |||||||||| |||||||||||||||||    
T  11535697 ttttaaaatcttcaagactttttttgtcaaaa-tagtcttttaaaatctcaattcaatacaccccct 11535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 30 - 285
Target Start/End: Complemental strand, 39219138 - 39218882
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||| |||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39219138 tttattgagattttatgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 39219039  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  39219038 atttcaaatcctttaaaatcttattaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtaatcaaaatcttgcaaagtcttttaaaa 39218939  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39218938 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaattcaatacacccc 39218882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 40996385 - 40996128
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40996385 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 40996286  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  40996285 atttcaaatcctttaaaatcttatgaattaaatccattgaaatctttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 40996186  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||| |||||||| |||||||||||| |||| ||||||||||||    
T  40996185 tcctcaagacttttttaatcaaaaattatcctttaaaatcctaatacaatacaccccc 40996128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 32 - 286
Target Start/End: Original strand, 8078502 - 8078757
Alignment:
Q  32 tattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcat 130  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||| |||||||| | ||||||||||    
T  8078502 tattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttaaaatctcttgaaaactataaaatcat 8078601  T
Q  131 ttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatc 230  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8078602 ttcaaatcctttaaaatcttattaattaaattcattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagtcttttaaaatc 8078701  T
Q  231 ctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  8078702 ctcaagacttttttaaacaaaaattgtcctttaaaatcctatttcaatacaccccc 8078757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 44343255 - 44343000
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||| |  |||||| ||||||||||||||||||     
T  44343255 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaattt--tgaaatctcttgaaatccataaaatt 44343158  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  44343157 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatgaaaatcttgcaaagtcttttaaaa 44343058  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  44343057 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 44343000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 28 - 283
Target Start/End: Complemental strand, 7719058 - 7718802
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||  |||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  7719058 tttttattgagattttgtgaaaaagagtgtattatgatatttttttcaattatttcttaaaattcataaaatctgatgaaatcccttgaaatccataaaa 7718959  T
Q  127 tcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaa 226  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  7718958 tcatttcaaatcctttaaaatcttatgaattaaatccattgaaatcattaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaa 7718859  T
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||    
T  7718858 aatcctcaagacttttttaaacaaaaattgttctttaaaatcctaatccaatacacc 7718802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 289
Target Start/End: Complemental strand, 43580872 - 43580612
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttt--aaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||| |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  43580872 tttattgaaattttgtgaaagagagtgtgttatgatatttttttcaaattatttcttaaaattcataaaatctgttaaaatctcttgaaatccataaaat 43580773  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||    
T  43580772 catttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagttatcaaaatcttgcaaagtcttttaaa 43580673  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccctag 289  Q
    ||| |||| | |||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  43580672 atcgtcaaaatttttttaaacaaaaattgtcctttaaaatcctaa-tccatacaccccctag 43580612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 7718126 - 7717871
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||||||||||||||| | |||||||||||||| |||||   |||||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  7718126 tttattgagattttgtgaaaaaaagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgatgaaatcccttgaaatccataaaat 7718027  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  7718026 catttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaa 7717927  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||    
T  7717926 atcctcaagacttttttaaacaaaaattgttctttaaaatcctaatctaatacacc 7717871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 977212 - 977467
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  977212 tttattgagattttgtgaaagagagtgtgttgtgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 977311  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  977312 atttcaaatcctttaaaatcttatgaattaaatccattgaaatcattaaaaatcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 977411  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    || ||||||||||||||||||||||||||| ||||||||| |||  ||||||||||    
T  977412 tcttcaagacttttttaaacaaaaattgtcttttaaaatcctaaaccaatacaccc 977467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 34 - 284
Target Start/End: Complemental strand, 43392277 - 43392026
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcattt 132  Q
    |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  43392277 ttgagattttgtaaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctattgaaatctcttgaaatccataaaatcattt 43392178  T
Q  133 caaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcct 232  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||    
T  43392177 caaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaattctgcaaagtcttttaaaatcct 43392078  T
Q  233 caagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||| ||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  43392077 caatacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 43392026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 727828 - 728082
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  727828 tttattgagattttgtgtaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttcaaatctcttgaaatctataaaatc 727927  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||| |||||||| |  ||| ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  727928 atttcaaaacctttaaa-tattatgaattaaatctattgaaattcttaatagttttttaaaatcatcaaagtcatcaaaatattgcaaagtcttttaaaa 728026  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  728027 tcctcaagacttttttaaacaaaaattctcctttaaaatcctaattcaatacaccc 728082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 47879551 - 47879799
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||| |||||||||         |    
T  47879551 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgatgaaatctcttgaaat---------c 47879641  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||    
T  47879642 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaaa 47879741  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||    
T  47879742 tcctcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacaccccc 47879799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 47914629 - 47914877
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||| |||||||||         |    
T  47914629 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgatgaaatctcttgaaat---------c 47914719  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||    
T  47914720 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaaa 47914819  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||    
T  47914820 tcctcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacaccccc 47914877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 30 - 287
Target Start/End: Original strand, 12893808 - 12894056
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||| ||| |||||  |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  12893808 tttattgagattttgtgaaagagagtgtgttataatatttttttcaattattttttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 12893907  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
     |||          |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  12893908 tttt----------aaaatcttatgaattaaatccattgaaattcttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 12893997  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  12893998 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 12894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 68 - 284
Target Start/End: Original strand, 34695748 - 34695964
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  34695748 tttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattg 34695847  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||| | |||||||||||||||| | |||||||||    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  34695848 aaatccttaataatattttaaaatcatcaaattaatcaaaatccatcaaagtcttttaaaatccttaagacttttttaaacaaaaattgtcctttaaaat 34695947  T
Q  268 cttaattcaatacaccc 284  Q
    | |||| ||||||||||    
T  34695948 cctaatccaatacaccc 34695964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 105 - 288
Target Start/End: Complemental strand, 18916624 - 18916441
Alignment:
Q  105 aaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatc 204  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18916624 aaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatc 18916525  T
Q  205 aaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  18916524 aaaatcttgcaaagtcttttaaaatcttcaagacttttttaaacaaaaattgtcctttaaaatcataatccaatacacccccta 18916441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 25 - 285
Target Start/End: Original strand, 30441556 - 30441809
Alignment:
Q  25 gattttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccata 123  Q
    |||| ||||||||||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||||||||||||||||          |||||    
T  30441556 gattctttattgagattttgtgaaagagagtgt--tatgatatttttttcaattatttcttaaaattcataaaatctgttgaaat----------ccata 30441643  T
Q  124 aaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatc----atcaaagtcatcaaaatcttgtaaagt 219  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||    ||||||||||||||||||||| |||||    
T  30441644 aaatcatttcaaatcctttaaaatcttatgaattaaatcccttgaaatccttaatagtcttttaaaatcaatcatcaaagtcatcaaaatcttgcaaagt 30441743  T
Q  220 tttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  30441744 attttaaaatcctcaagacttttttaaacaaaaattgtactttaaaatcttaatccaataaacccc 30441809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 31401781 - 31402029
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttat---gatagtttttaa-attatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaa 125  Q
    |||||||||||||||||||||||||||||||||   |||| |||||   |||||||| |||||||||||||||||          |||||||||||||||    
T  31401781 tttattgagattttgtgaaagagagtgtgttattatgatatttttttcgattatttcataaaattcataaaatct----------cttgaaatccataaa 31401870  T
Q  126 atcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagtttttta 225  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||| || ||||| |||||    
T  31401871 atcatttcaaatcctttaaaatcatatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaggttatcaaaatcctgcaaagtctttta 31401970  T
Q  226 aaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  31401971 aaatcctcaagacttttttaaacaaaaattgtcctttaaaattctaattcaatacaccc 31402029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 34009414 - 34009645
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||| |||||||||||||||||| |||||  |||||||||||||||||||||||||||          ||||||||||||||||||    
T  34009414 tttattgagattttgtgacagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatct----------cttgaaatccataaaatc 34009503  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||| ||||||||    
T  34009504 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatcttgcaaagtcttttaaaa 34009594  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  34009595 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaata 34009645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 84 - 284
Target Start/End: Complemental strand, 20275090 - 20274900
Alignment:
Q  84 taaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtct 183  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||    
T  20275090 taaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttttgaattaaatccattgaaatccttaatagtct 20274991  T
Q  184 tttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    |||||||||||         ||||||| |  ||||| |||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  20274990 tttaaaatcat---------caaaatcctccaaagtcttttaaaatcctcaagac-tttttaaacaaaaattgtactttaaaatcctaattcaatacacc 20274901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 7113788 - 7114025
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||||||||||||||||||| ||| |||||||| |||||   ||||||||||||||||||||||||||||||||||||          ||||||||    
T  7113788 tttattgagattttgtgaaagagaatgtcttatgatattttttttcaattatttcttaaaattcataaaatctgttgaaatt----------cataaaat 7113877  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||         ||||||||||| |  ||||| |||||||    
T  7113878 catttcaaatcctttaaaatattatgaattaaatccattgaaatctttaatagtcttttaaaa---------tcatcaaaatcctccaaagtcttttaaa 7113968  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    || || ||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  7113969 attcttaagacttttttaaacaaaaattgtcctttaaaatcataaaccaatacaccc 7114025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 31639126 - 31639211
Alignment:
Q  119 ccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatc 204  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  31639126 ccataaaatcatttcaaatcctttaaaatcttatgaattaaattcattgaaatccttaatagtcttttaaaatcattaaagtcatc 31639211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 85 - 285
Target Start/End: Complemental strand, 3796913 - 3796702
Alignment:
Q  85 aaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcctta-------- 176  Q
    |||||||||||||||| ||||||| |  | ||||||||||||||||||||||| |||||||||  | | |  |||||||||||||||||  |            
T  3796913 aaaattcataaaatcttttgaaatcttat-aaatccataaaatcatttcaaattctttaaaattatctgatgtaaatccattgaaatccaaattgtaaat 3796815  T
Q  177 ----atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaa 272  Q
        |||||||||||||||||| ||||||||  ||||| |  ||| | |||||||||| |  |||||||||||  ||||||||||||||||||||| |||    
T  3796814 cctgatagtcttttaaaatcataaaagtcatttaaatcctacaaaatcttttaaaatctttgagacttttttactcaaaaattgtcctttaaaatcctaa 3796715  T
Q  273 ttcaatacacccc 285  Q
    |||||||||||||    
T  3796714 ttcaatacacccc 3796702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 19811092 - 19811199
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||| ||||||| |||||||| |||||| |  ||| | ||||||||||||| |||||||||||| |||||||| ||||| |||||| |||||||    
T  19811092 atagtcttttgaaatcataaaagtcattaaaatcctacaaaatcttttaaaatcctcgagacttttttaagcaaaaattatccttcaaaatcctaattca 19811191  T
Q  277 atacaccc 284  Q
    ||||||||    
T  19811192 atacaccc 19811199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 82 - 273
Target Start/End: Original strand, 10617260 - 10617462
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaat---------- 171  Q
    ||||||||||||||| ||| |||||||||  | |||||||||||||||||||||||||||||||||  ||| |  |||||||||||||||              
T  10617260 cttaaaattcataaactcttttgaaattttat-aaatccataaaatcatttcaaatcctttaaaattttatgatgtaaatccattgaaattcaaattgta 10617358  T
Q  172 --ccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatct 269  Q
       | | ||| ||| |||||||||| |||||||| |||||| |   |||| |||||||||| |||||| ||||||||  ||||||||||||||||||| |    
T  10617359 aatcatgataatctcttaaaatcatgaaagtcattaaaatcctacgaagtcttttaaaatcttcaagatttttttaagtaaaaattgtcctttaaaattt 10617458  T
Q  270 taat 273  Q
    ||||    
T  10617459 taat 10617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 43679633 - 43679742
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||| |||||||||||||||||||||||||||  |||||   ||||||||||||||||||||| ||||||          ||||||||||||||||    
T  43679633 tttattga-attttgtgaaagagagtgtgttatgatcatttttttcaattatttcttaaaattcatagaatctg----------ttgaaatccataaaat 43679721  T
Q  128 catttcaaatcctttaaaatc 148  Q
    |||||||||||||||||||||    
T  43679722 catttcaaatcctttaaaatc 43679742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 448236 - 448313
Alignment:
Q  205 aaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacac 282  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||    
T  448236 aaaatcctgcaaagtcttttaaaatcctcaagacttttttaaacaaaaattattctttaaaatcataattcaacacac 448313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 12964033 - 12964098
Alignment:
Q  221 ttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  12964033 ttttaaaatcttcaagacttttttaagcaaaaattgtcctttaaaatcctaatccaatacaccccc 12964098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 3635094 - 3635222
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | |||||||||||| | |||||||| | ||||||| | | | |||| |||||| | ||||||||| | | ||||||||    
T  3635094 taaatcccttgaaatccttgagaatcttttaaaatcctaaaagtcattacaatcttgcataatctttttaaatccactagactttttcatataaaaattg 3635193  T
Q  257 tcctttaaaatcttaattcaatacacccc 285  Q
    || ||||||||| |||| |||||||||||    
T  3635194 tcttttaaaatcctaatccaatacacccc 3635222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 835066 - 835129
Alignment:
Q  219 ttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacac 282  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||| |||| ||||||||    
T  835066 ttttttaaaatcatcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacac 835129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 1200246 - 1200309
Alignment:
Q  219 ttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacac 282  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||| |||| ||||||||    
T  1200246 ttttttaaaatcatcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacac 1200309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 19251910 - 19252000
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    ||||||||||||||||||| ||||||| |  | |||| ||||||||||||||| ||||||||||||| ||| |  |||||||||||||||||    
T  19251910 cttaaaattcataaaatcttttgaaatcttat-aaattcataaaatcatttcacatcctttaaaatcttatgatgtaaatccattgaaatcc 19252000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 268
Target Start/End: Complemental strand, 43187055 - 43186964
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatc 268  Q
    |||||||||||||||||| |||||||| |||||| | |||| | ||| |||||| |  |||||||||||| ||||||||||||| |||||||    
T  43187055 atagtcttttaaaatcatgaaagtcattaaaatcctctaaaatctttaaaaatctttgagacttttttaatcaaaaattgtcctctaaaatc 43186964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 9180231 - 9180309
Alignment:
Q  83 ttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaat 161  Q
    |||||||||||||| ||||||||||| | |||||||||| |||||||||| ||| | ||||||||||||| | ||||||    
T  9180231 ttaaaattcataaagtctgttgaaatcttttgaaatccacaaaatcattttaaaacttttaaaatcgtatgagttaaat 9180309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 9180353 - 9180414
Alignment:
Q  223 ttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||| |||| |||||    
T  9180353 ttaaaatccttaacacttttttaaacaaaaattgtcctttaaaatcctaatccaattcaccc 9180414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 34695675 - 34695712
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgat 65  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34695675 tttttattgagattttgtgaaagagagtgtgttatgat 34695712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 288
Target Start/End: Original strand, 40098444 - 40098574
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | |||||||||||| | |||||||| ||||||||| | | | ||||||||| | |  |||||||| | ||||||||      
T  40098444 taaatcccttgaaatccttgagaatcttttaaaatcctaaaagtcattaaaatcttgcataatcttttaaaattcac-tgactttttcatacaaaaataa 40098542  T
Q  257 tcctttaaaatcttaattcaatacacccccta 288  Q
    || ||||||||| ||||  |||||||||||||    
T  40098543 tcttttaaaatcctaatcaaatacacccccta 40098574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 31639220 - 31639266
Alignment:
Q  238 cttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||    
T  31639220 cttttttaaacaaaaattgtcctttaaaattataatccaatacaccc 31639266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 10068952 - 10069017
Alignment:
Q  221 ttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||  |||||||||||| |||||||| |||||||||||| || |  |||||||||||    
T  10068952 ttttaaaatccttgagacttttttaagcaaaaattatcctttaaaatcctagtctaatacaccccc 10069017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 10068845 - 10068930
Alignment:
Q  87 aattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    |||||||||||||| ||||||| |  | |||| ||||| |||||||| |||||||||||||| | | |  |||||||||||||||||    
T  10068845 aattcataaaatcttttgaaatcttat-aaattcataatatcatttccaatcctttaaaatcttgtgatgtaaatccattgaaatcc 10068930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 273
Target Start/End: Original strand, 19252014 - 19252111
Alignment:
Q  175 taatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    ||| |||||||||||||||| |||||||| ||||||||  ||| | ||||||||||    |||  ||||||| |||||||||||||||| |||| ||||    
T  19252014 taagagtcttttaaaatcatgaaagtcattaaaatcttacaaaatcttttaaaatcacttaga-atttttaagcaaaaattgtcctttagaatcctaat 19252111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 278
Target Start/End: Original strand, 43679777 - 43679839
Alignment:
Q  216 aagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaat 278  Q
    |||| ||||||||| || |||| ||||||||||||||||| ||| |||||||| |||| ||||    
T  43679777 aagtcttttaaaatactaaagatttttttaaacaaaaattatccattaaaatcctaatccaat 43679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 44623062 - 44622996
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatc 148  Q
    |||||||||||| |||||| ||||||| |  | |||| |||| |||| |||||||||||||||||||    
T  44623062 cttaaaattcattaaatcttttgaaatcttataaaattcatacaatcttttcaaatcctttaaaatc 44622996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 727738 - 727770
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttat 62  Q
    ||||||||||||||||| |||||||||||||||    
T  727738 tttattgagattttgtgtaagagagtgtgttat 727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-113; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 30 - 288
Target Start/End: Complemental strand, 33996246 - 33995987
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  33996246 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatacataaaatc 33996147  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  33996146 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaattttgcaaagtcttttaaaa 33996047  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33996046 ttctcaagacttttttaaacaaaaattgtcctttaaaatcttaatccaatacacccccta 33995987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 33807419 - 33807165
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttt-ttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33807419 tttattgagattttgtgaaagagagtgtgttatgatattttgttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 33807320  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  33807319 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaaatcttttaaaa 33807220  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||||||    
T  33807219 tcctcaagacttttttaaataaaaattgtcctttaaaatcctaatccaatacacc 33807165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 30 - 279
Target Start/End: Complemental strand, 51699304 - 51699054
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  51699304 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 51699205  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  51699204 atttcaaatcctttaaaatcttattaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 51699105  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  51699104 tccttaagacttttttaaacaaaaattgtcctttaaaatcataatccaata 51699054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 20498648 - 20498898
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  20498648 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatcagttgaaatctcttgaaatccataaaatc 20498747  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  20498748 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttattattcttttaaaatcatcaaagtcatcataatcttgcaaagtcttttaaaa 20498847  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  20498848 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaata 20498898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 28 - 285
Target Start/End: Complemental strand, 29448693 - 29448436
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  29448693 tttttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatatcttgaaattcataaaa 29448594  T
Q  127 tcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaa 226  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||    
T  29448593 tcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatc-tcaaagtcatcaaaatcttgcaaagtcttttaa 29448495  T
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
    ||| |||||||||||||||||||||||||||  ||||||||| |||| |||||||||||    
T  29448494 aattctcaagacttttttaaacaaaaattgttttttaaaatcctaatccaatacacccc 29448436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 995737 - 995482
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||| |||| |||||||||||||  ||||||| |||||  ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  995737 tttattgagtttttatgaaagagagtgt--tatgatatttttttcaattatttctttaaattcataaaatctgttgaaatatcttgaaatccataaaatc 995640  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  995639 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 995540  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  995539 tcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 995482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 33 - 288
Target Start/End: Complemental strand, 44761871 - 44761615
Alignment:
Q  33 attgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatt 131  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  44761871 attgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccttaaaatcatt 44761772  T
Q  132 tcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcc 231  Q
    |||||  |||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| |||||||||||    
T  44761771 tcaaaatctttaaaatcttatgaattaaatctattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctacaaagtcttttaaaatcc 44761672  T
Q  232 tcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  44761671 tcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacacccccta 44761615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 6589932 - 6590187
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||| |||||||||||  |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  6589932 tttattgagattttgtgaaagagaatgtgttatgatgtttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatt 6590031  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| | |||||| ||||||||    
T  6590032 atttcaaatcctttaaaatcttatgaattaaatcgattgaaatccttaatagtctttaaaaaccatcaaagtcatcaaaatcctctaaagtcttttaaaa 6590131  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  6590132 tcctcaagactttcttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 6590187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 30 - 281
Target Start/End: Original strand, 54625926 - 54626179
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||   ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  54625926 tttattgtgattttgtgaaagagagtgtgttctgatattttttttcaattatttcttaaaattcataaaatctgttgaaatctctttaaatccttaaaat 54626025  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  54626026 catttcaaattctttaaaatcttatgaattaaatccattgaaatccttagtagtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaa 54626125  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaataca 281  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||||||    
T  54626126 atcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaataca 54626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 16008345 - 16008097
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16008345 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 16008246  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||||| |||||||||||||||         |||||||||| ||||| ||||||||    
T  16008245 atttcaaatcctttaaaatcttgtgaattaaatccattgaaatccttaattgtcttttaaaatcat---------caaaatcttgcaaagtcttttaaaa 16008155  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| |||||| |||||    
T  16008154 tcctcaagacttttttaaacaaaaattgacctttaaaatcctaatccaatacgccccc 16008097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 34 - 284
Target Start/End: Original strand, 19254340 - 19254581
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcattt 132  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||          |||||||||||||    
T  19254340 ttgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaatttataaaatctgttgaaatt----------cataaaatcattt 19254429  T
Q  133 caaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcct 232  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |    
T  19254430 caaatcatttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaatctt 19254529  T
Q  233 caagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  19254530 caagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 19254581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 31 - 288
Target Start/End: Complemental strand, 53928894 - 53928645
Alignment:
Q  31 ttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    |||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  53928894 ttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaatttataaaatctgttgaaatctcttgaaatccataaaatca 53928795  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    |||||| |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||         |||||||||| ||||| |||||||||    
T  53928794 tttcaactcctttaaaatcttattaattaaatccattgaaatccttaataatcttttaaaatcat---------caaaatcttgcaaagtcttttaaaat 53928704  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
     ||||| ||||||||||||||||||| |||||||||||  |||| ||||||||||||||    
T  53928703 tctcaacacttttttaaacaaaaattatcctttaaaattctaatccaatacacccccta 53928645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 3999385 - 3999147
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||                   |    
T  3999385 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctcttgaaat-------------------c 3999305  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  3999304 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 3999205  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  3999204 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 3999147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 68 - 284
Target Start/End: Original strand, 35338161 - 35338377
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35338161 tttttcaattatttcttaaaattcataaaatctattgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttataaattaaatccattg 35338260  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||| | |||||||||||||||| | |||||||||    ||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  35338261 aaatccttaataatattttaaaatcatcaaattaatcaaaatccatcaaagtcttttaaaatcattaagacttttttaaacaaaaattgtcctttaaaat 35338360  T
Q  268 cttaattcaatacaccc 284  Q
    | |||| ||||||||||    
T  35338361 cctaatccaatacaccc 35338377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 31 - 284
Target Start/End: Original strand, 25418803 - 25419053
Alignment:
Q  31 ttattgagattttgtgaaagagagtgtgttatgatagttttta------aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataa 124  Q
    |||||||||||||||||||||||||||||||||||| |||||       || | ||||||||||||||||||||||||| |||| |||||||||||||||    
T  25418803 ttattgagattttgtgaaagagagtgtgttatgatattttttttttttcaaatgtttcttaaaattcataaaatctgtttaaatctcttgaaatccataa 25418902  T
Q  125 aatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagtttttt 224  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         ||||| ||||| |  ||||| ||||    
T  25418903 aatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatccaaatcctccaaagtctttt 25418993  T
Q  225 aaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  25418994 aaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 25419053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 30 - 273
Target Start/End: Complemental strand, 1439763 - 1439525
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta----aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaa 125  Q
    |||||||||||||||||||||||| |||||||||||| |||||     |||| |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  1439763 tttattgagattttgtgaaagagaatgtgttatgatattttttttttcaattgtttcttaaaattcataaaatttgttgaaatctcttgaaatccataaa 1439664  T
Q  126 atcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagtttttta 225  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||         |||| ||||| | |||||| |||||    
T  1439663 atcatttcaaatcctttaaaatcttataaattaaatacattgaaatccttaatagtcttttaaaat---------catccaaatcctctaaagtctttta 1439573  T
Q  226 aaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  1439572 aaatccttaagatttttttaaacaaaaattgtcctttaaaatcctaat 1439525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 30 - 203
Target Start/End: Complemental strand, 3205762 - 3205599
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||          |||||||||||||||||||    
T  3205762 tttattgagattttgtgaaagagagtgtgttatgatattttttcaattatttcttaaaattcataaaatct----------cttgaaatccataaaatca 3205673  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcat 203  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3205672 tttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaaatcat 3205599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 68 - 284
Target Start/End: Complemental strand, 10138931 - 10138725
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  10138931 tttttcaattatttcttaaaattcataaaatctgttgaaat----------ccataaaatcatttcaaatcctttataatcttatgaattaaatccattg 10138842  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||| |||||||||||||||||| | |||||||||    ||||| |||||||||||| |||| |||||||||||||||||||||||||||||    
T  10138841 aaatccttaataatcttttaaaatcatcaaattaatcaaaatccatcaaagtcttttaaaatccttaagaattttttaaacaaaaattgtcctttaaaat 10138742  T
Q  268 cttaattcaatacaccc 284  Q
    | |||| ||||||||||    
T  10138741 cctaatccaatacaccc 10138725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 98 - 273
Target Start/End: Complemental strand, 6131185 - 6131020
Alignment:
Q  98 tctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaa 197  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |          || ||||||||||||| ||||||||||||||||||||||||||||||    
T  6131185 tctgttgaaatctcttgaaattcataaaatcatttcaaatctt----------atgaattaaatccatttaaatccttaatagtcttttaaaatcatcaa 6131096  T
Q  198 agtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    ||||||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6131095 agtcatcaaaatcctgcaaagtcttttaaaatcctaaagacttttttaaacaaaaattgtcctttaaaatcttaat 6131020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 30 - 266
Target Start/End: Original strand, 52114962 - 52115181
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgata--gtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||||          |||||||| |||||||    
T  52114962 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctg----------ttgaaatctataaaat 52115051  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| | | |||||||| |||||||||| | |||| ||||||||||         ||||||||||| | |||||| |||||||    
T  52115052 catttcaaatcctttaaaatcttgtgaattaaatacattgaaatcttcaataatcttttaaaa---------tcatcaaaatcctataaagtcttttaaa 52115142  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaa 266  Q
    || || |||||||||||||||||||||||||||||||||    
T  52115143 attcttaagacttttttaaacaaaaattgtcctttaaaa 52115181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 52 - 287
Target Start/End: Original strand, 52080431 - 52080651
Alignment:
Q  52 gagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgta 151  Q
    ||||||||||||||| ||||| |||||||| |||||||| |||||||||          |||||||||||||||||||||||||||||||||||||| ||    
T  52080431 gagtgtgttatgatattttttcaattattttttaaaatttataaaatct----------cttgaaatccataaaatcatttcaaatcctttaaaatctta 52080520  T
Q  152 taaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagactttt----ttaaa 247  Q
    | |||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||| |||||||||| |||||||||||      |||    
T  52080521 tgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatcttgcaaagtcttttaaaatcttcaagacttttaaaaaaaaa 52080611  T
Q  248 caaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
     |||||||||||||||||||| |||| |||||||||||||    
T  52080612 aaaaaattgtcctttaaaatcataatccaatacaccccct 52080651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 30 - 282
Target Start/End: Original strand, 40247160 - 40247424
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatcca------- 121  Q
    ||||||||| |||||||||||||||| ||||||| || |||||  |||| |||||||||||||||||||||||||||||| | ||||||||||           
T  40247160 tttattgagtttttgtgaaagagagtatgttatggtatttttttcaattgtttcttaaaattcataaaatctgttgaaatctgttgaaatccataaaatc 40247259  T
Q  122 -------------taaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaa 208  Q
                 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         |||||||||    
T  40247260 atttcaaatcctttaaaatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaa 40247350  T
Q  209 tcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacac 282  Q
    || |  ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||  ||| ||||||||    
T  40247351 tcctccaaagtcttttaaaatcctcaacacttttttaaacaaaaattatcctttaaaatccaaatccaatacac 40247424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 82 - 285
Target Start/End: Original strand, 6976081 - 6976295
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc-------- 173  Q
    ||||||||||||||||||| |||||||||  | |||| || |||||||||||||||||||||||||| ||| |  |||||||||||||||||            
T  6976081 cttaaaattcataaaatcttttgaaattttat-aaattcacaaaatcatttcaaatcctttaaaatcttatgatgtaaatccattgaaatccaaattgta 6976179  T
Q  174 ----ttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatct 269  Q
        || |||||||||||||||||| |||||||| |||||| |  ||||| ||||||||||||  |||||||||||| |||||||||||||||||||||     
T  6976180 aatcttgatagtcttttaaaatcataaaagtcattaaaatcctacaaagtcttttaaaatccttgagacttttttaagcaaaaattgtcctttaaaatca 6976279  T
Q  270 taattcaatacacccc 285  Q
    ||||  ||||||||||    
T  6976280 taatcaaatacacccc 6976295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 286
Target Start/End: Original strand, 7319063 - 7319175
Alignment:
Q  173 cttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaa 272  Q
    |||||||||||||||||||| | |||||||| ||||||||  ||||| ||||||||||| ||||| ||||||| || ||||||||| ||||||||| |||    
T  7319063 cttaatagtcttttaaaatcttaaaagtcattaaaatctttcaaagtcttttaaaatccacaagatttttttatac-aaaattgtcttttaaaatcctaa 7319161  T
Q  273 ttcaatacaccccc 286  Q
    | ||||||||||||    
T  7319162 tccaatacaccccc 7319175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 52080331 - 52080430
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||          |||||||||||||||||||    
T  52080331 tttattgaaattttgtgaaagagagtgtgttatgatattttttcaattattttttaaaatttataaaatct----------cttgaaatccataaaatca 52080420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 23535838 - 23535747
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    ||||||||||||||||||| ||||||| |  | |||| ||||||||||||||||||||||||||||| ||||   |||||||||||||||||    
T  23535838 cttaaaattcataaaatcttttgaaatcttataaaattcataaaatcatttcaaatcctttaaaatcttatagtgtaaatccattgaaatcc 23535747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 45135682 - 45135797
Alignment:
Q  173 cttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaa 272  Q
    |||||||||||||||||||  | |||||||| ||||||||  ||||| ||||||||| | |||||||||||| |   ||||||||| ||||||||| |||    
T  45135682 cttaatagtcttttaaaattttaaaagtcattaaaatctttcaaagtcttttaaaatacacaagactttttttatacaaaattgtcttttaaaatcctaa 45135781  T
Q  273 ttcaatacacccccta 288  Q
    |  |||||||||||||    
T  45135782 tcaaatacacccccta 45135797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 50899360 - 50899249
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||||| ||| |||| |||||| |  ||| | |||||||||| |  |||||||||||| ||||||||||||||| ||||| ||||  |    
T  50899360 atagtcttttaaaatcataaaaatcattaaaatcctacaaaatcttttaaaatctttgagacttttttaagcaaaaattgtcctttgaaatcctaatcta 50899261  T
Q  277 atacacccccta 288  Q
    ||||||||||||    
T  50899260 atacacccccta 50899249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 46174719 - 46174829
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||| | |||||| | |||||| || ||| | ||||||||| ||||| ||||||||||||||||||| || ||||||||| ||||  |    
T  46174719 atagtcttttaaaatcttaaaagtccttaaaatcatgcaaaatcttttaaaattctcaaaacttttttaaacaaaaattatcttttaaaatcctaatcga 46174818  T
Q  277 atacaccccct 287  Q
    |||||| ||||    
T  46174819 atacactccct 46174829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 15492512 - 15492404
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||||| ||| |||| |||||| |  ||| | |||||||||| |  | |||||||||| ||||||||||||||||||||  |||| ||    
T  15492512 atagtcttttaaaatcatgaaaatcattaaaatcatacaaaatcttttaaaatctttgaaacttttttaagcaaaaattgtcctttaaaattctaatcca 15492413  T
Q  277 atacacccc 285  Q
    |||||||||    
T  15492412 atacacccc 15492404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 6034760 - 6034692
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||| ||||||||||| | |||||||||||| |||| |||||| ||||||||| ||||||||||||||    
T  6034760 aaagtcttttaaaatccacgagacttttttaagcaaacattgtcttttaaaatcctaattcaatacacc 6034692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 279
Target Start/End: Original strand, 12103940 - 12104148
Alignment:
Q  83 ttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcctta------ 176  Q
    |||||||| ||||||||| ||||||| |  | |||||||||||||| ||| ||||||||||||||| ||| |  |||||||||||||||||  |          
T  12103940 ttaaaattgataaaatcttttgaaatcttat-aaatccataaaatcttttaaaatcctttaaaatcttatgatgtaaatccattgaaatccaaattgaaa 12104038  T
Q  177 ------atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaag-acttttttaaacaaaaattgtcctttaaaatct 269  Q
          |||||||||||||||||| |||||||| |||||| | |||| | |||||||||| |  || | |||||||| |||||||| |||| |||||| |    
T  12104039 atcccgatagtcttttaaaatcatgaaagtcattaaaatcctataaaatcttttaaaatctttgagaatttttttaagcaaaaattttcctctaaaattt 12104138  T
Q  270 taattcaata 279  Q
    |||| |||||    
T  12104139 taatccaata 12104148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 198
Target Start/End: Complemental strand, 37820451 - 37820392
Alignment:
Q  139 ctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaa 198  Q
    |||| ||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||    
T  37820451 ctttcaaatcttatgaattaaatccattgaaatccttaataatcttttaaaataatcaaa 37820392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 38772465 - 38772524
Alignment:
Q  115 aaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcct 174  Q
    ||||||||||||| |||||||||||||||||||| ||| |  ||||||||||||||||||    
T  38772465 aaatccataaaattatttcaaatcctttaaaatcttatgatgtaaatccattgaaatcct 38772524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 12108120 - 12108169
Alignment:
Q  235 agacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  12108120 agacttttttaagcaaaaattgtcctttaaaatcctaatccaatacaccc 12108169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 539445 - 539338
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||||| |||||||| |||  |    ||||| |||||||||| || |||||||||||| |||||||| ||||| |||||  |||| ||    
T  539445 atagtcttttaaaatcatgaaagtcattaaatccac--aaagtcttttaaaatcttcgagacttttttaagcaaaaatt-tccttaaaaatgctaatcca 539349  T
Q  277 atacaccccct 287  Q
    |||||||||||    
T  539348 atacaccccct 539338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 37820386 - 37820323
Alignment:
Q  221 ttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||| |||||| | ||||||||||||| ||||  ||||||||| |||||||||||||||    
T  37820386 ttttaaaattctcaaggcctttttaaacaaaatttgttatttaaaatcctaattcaatacaccc 37820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 38772534 - 38772585
Alignment:
Q  222 tttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||| ||||    
T  38772534 tttaaaattcttgagacttttttaaacaaaaattgtcctttaaaatcctaat 38772585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 279
Target Start/End: Original strand, 5825996 - 5826097
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||| ||||||||||||| ||| |||| ||||| ||  ||| | ||||||||| ||||||||  ||||||||||||||||||| ||| |||| ||||| |    
T  5825996 ataggcttttaaaatcatgaaaatcattaaaattttacaaaatcttttaaaattctcaagac-cttttaaacaaaaattgtcccttacaatcctaattaa 5826094  T
Q  277 ata 279  Q
    |||    
T  5826095 ata 5826097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 12105134 - 12105223
Alignment:
Q  83 ttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    |||||||||||||||||| ||||||| |  |||| ||||||||||| ||| |||| |||||||||  ||| |  |||||||||||||||||    
T  12105134 ttaaaattcataaaatcttttgaaatcttatgaa-tccataaaatccttttaaattctttaaaatattatgatgtaaatccattgaaatcc 12105223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 38772399 - 38772459
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatccttta 143  Q
    ||||||||||||||||||| ||||||| |  | |||| ||||||||||||||||||||||||    
T  38772399 cttaaaattcataaaatcttttgaaatcttat-aaattcataaaatcatttcaaatccttta 38772459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 28145677 - 28145617
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaa-acaaaaattgtcctttaaaatcttaatt 274  Q
    ||||| ||||||||||| |||||||||||| | |||||||||||| ||||||||| |||||    
T  28145677 aaagtcttttaaaatccacaagactttttttatacaaaaattgtcttttaaaatcctaatt 28145617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 10139003 - 10138968
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgat 65  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10139003 tttattgagattttgtgaaggagagtgtgttatgat 10138968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 27899695 - 27899746
Alignment:
Q  112 ttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatcc 163  Q
    |||||||  |||||||||||||||||||||||||||| ||| | ||||||||    
T  27899695 ttgaaatttataaaatcatttcaaatcctttaaaatcttatgagttaaatcc 27899746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 6034863 - 6034805
Alignment:
Q  115 aaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    ||||||||||||| ||||||||||||||||||||  || |  || ||||||||||||||    
T  6034863 aaatccataaaattatttcaaatcctttaaaatctcatgatgtatatccattgaaatcc 6034805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 31645427 - 31645362
Alignment:
Q  221 ttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||||||| | ||||||||||| |  |||| ||||| |||||||||||||| |||||||||||||    
T  31645427 ttttaaaatcttaaagactttttttattaaaa-ttgtcttttaaaatcttaatccaatacaccccct 31645362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 46749965 - 46750066
Alignment:
Q  185 ttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||| | |||||||| ||||||||  | | | ||||||||||| |  |||||||| |  ||||||||||| ||||||||| |||| ||||||||||    
T  46749965 ttaaaatcgtaaaagtcattaaaatcttcaataatcttttaaaatccactggactttttcat-caaaaattgtcttttaaaatcgtaatccaatacaccc 46750063  T
Q  285 cct 287  Q
    |||    
T  46750064 cct 46750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 39842168 - 39842119
Alignment:
Q  235 agacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||| ||||| |||||||| |||||||||||| |||| ||||||||||    
T  39842168 agacttctttaagcaaaaattatcctttaaaatcctaatccaatacaccc 39842119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 5825891 - 5825954
Alignment:
Q  83 ttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaat 147  Q
    |||||||||||||||||| ||||||| | |  |||| ||||||||| ||| ||||||||||||||    
T  5825891 ttaaaattcataaaatcttttgaaatct-tataaattcataaaatcgttttaaatcctttaaaat 5825954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 22057989 - 22058021
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatct 100  Q
    ||||| |||||||||||||||||||||||||||    
T  22057989 tttttcaattatttcttaaaattcataaaatct 22058021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 22202485 - 22202742
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  22202485 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaatttataaaatctgttgaaatctcttgaaatccataaaatc 22202584  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  22202585 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 22202684  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  22202685 tcctcaagacttctttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 22202742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 30 - 281
Target Start/End: Original strand, 25331503 - 25331757
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta---aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||| |||||    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25331503 tttattgagattttgtgaaagagagtgtgttatgatatttttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaa 25331602  T
Q  127 tcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaa 226  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  25331603 tcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaa 25331702  T
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaataca 281  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  25331703 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaataca 25331757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 7007709 - 7007964
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  7007709 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctcttgaaatctcttgaaatccttaaaatc 7007808  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||    
T  7007809 atttcaaatcctttaaaatcttatgaattaaatctattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaattctgcaaagtcttttaaaa 7007908  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||||||||||||| || ||||||||| |||| ||||||||||    
T  7007909 tcctcaagacttttttaaacaaaaattatcttttaaaatcctaatccaatacaccc 7007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 30 - 282
Target Start/End: Complemental strand, 30009548 - 30009296
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    |||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  30009548 tttattgagattttgtaaaagagagtgtgttatgattttttttcaattatttcttaaaattcataaaatctattgaaatctcttgaaatccataaaatca 30009449  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |  ||||| |||||||||    
T  30009448 tttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaacagtcttttaaaatcatcaaagtcatcaaaatcctccaaagtcttttaaaat 30009349  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacac 282  Q
     ||||| ||||||||||| |||||||||||||||||||| |||| ||||||||    
T  30009348 tctcaaaacttttttaaataaaaattgtcctttaaaatcctaatccaatacac 30009296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 30 - 283
Target Start/End: Original strand, 3436948 - 3437204
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgtt--atgatag-tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    |||||||||||| ||||||||||||||||||  ||||||  ||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  3436948 tttattgagattatgtgaaagagagtgtgttttatgatatattttttaattatttcttaaaattcataaaatatgttgaaatctcttgaaatccataaaa 3437047  T
Q  127 tcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaa 226  Q
    | |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | ||||| ||||||    
T  3437048 ttatttcaaatcatttaaaatcttatgaattaaatccattgaaatccttaatagtcatttaaaatcatcaaagtcatcaaaatccagcaaagtcttttaa 3437147  T
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  3437148 aatcctcaagacttttttaaacaaaaattgtcttttaaaatcctaattcaatacacc 3437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 24130708 - 24130460
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  24130708 tttattgagattttgtgaaagaaagtgtgttatgatatttttttcaattatttcttaaaattcataaaatttgttgaaatctcttgaaatccataaaatc 24130609  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||         ||||||| || ||||| ||||||||    
T  24130608 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcat---------caaaatcatgcaaagtcttttaaaa 24130518  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  24130517 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 24130460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 30 - 287
Target Start/End: Complemental strand, 34228406 - 34228158
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||| |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||        |||||||    
T  34228406 tttattaagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaat--ctt--------taaaatc 34228317  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||    
T  34228316 atttcaaatcctttaaaatcttatgaattaaattcattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaaa 34228217  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  34228216 tcctcaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccccct 34228158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 28541916 - 28542161
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  28541916 tttattgagattttgtgaaagagagtgtgttatgatattttttcaattatttcttaaaattcataaaatccgttgaaatctcttgaaatccataaaatca 28542015  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||         ||||||||||||||| |  ||||| |||||||||    
T  28542016 tttcaaatcctttaaaatcttatgaattaaatccattgaaatctttaatagtctttt---------aaagtcatcaaaatcctccaaagtcttttaaaat 28542106  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
     ||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  28542107 tctcaatacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 28542161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 41321119 - 41321365
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  41321119 tttattgagattttgtgaaagagagtgtgttatgatagttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgcaatccataaaatc 41321218  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||         |||||||||||||  ||||| ||||||||    
T  41321219 atttcaaatcctttaaaatcttttgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatcttccaaagtcttttaaaa 41321309  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||| |||||||||||||||||||||  || ||||||||| |||| ||||||||||    
T  41321310 tccttaagacttttttaaacaaaaatcatcttttaaaatcctaatccaatacaccc 41321365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 55974989 - 55975233
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||||||||| ||||||||  |||||||||||| |||||   ||||||||||||||||||||||||||| ||||          ||||||||||||    
T  55974989 tttattgagattttatgaaagag--tgtgttatgatattttttttcaattatttcttaaaattcataaaatcttttga----------aatccataaaat 55975076  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  55975077 catttcaaatcctttaaaatcttatcaattaaatccattgaaatctttaatagtcttttaaaatcatcaaagtcatcaaaatcatctaaagtcttttaaa 55975176  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  55975177 atcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 55975233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 49469639 - 49469886
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  49469639 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatcttttgaaatctcttgaaatccataaaat 49469738  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||         ||||||||||| |  |||||  ||||||    
T  49469739 catttcaaatcctttaaaatcttatgaattaaattcattgaaatcgttaatagtcttttaaaa---------tcatcaaaatccttcaaagtcctttaaa 49469829  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  49469830 atcctcaagacttttttaaacaaaaattgtcctttaaaattctaatccaatacaccc 49469886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 32952067 - 32952314
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||         |||||||| ||||||||    
T  32952067 tttattgagattttgtgaaagagagtgtgttatgatattttttcaattatttcttaaaatttataaaatctgtt---------tgaaatccttaaaatca 32952157  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |  ||||| |||||||||    
T  32952158 tttcaaatcctttaaaatcttatgaattaaatccattgaaatcttttatagtcttttaaaattatcaaagtcatcaaaatcctacaaagtcttttaaaat 32952257  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||| |||||||||||||| |||||||||||  | || ||||||||||||    
T  32952258 cctcaagacttatttaaacaaaaattatcctttaaaattcttatccaatacaccccc 32952314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 30 - 285
Target Start/End: Original strand, 25446513 - 25446749
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25446513 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 25446612  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||                    ||||||||||||||||||||||||||||| ||||| ||||||||    
T  25446613 atttcaaatcctttaaaatcttatgaattaaatcca--------------------ttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 25446692  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  25446693 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacacccc 25446749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 28 - 286
Target Start/End: Complemental strand, 31314662 - 31314422
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||||||||||||          |||||||    
T  31314662 tttttattgagattttgtgaaagagagtgtgttatcatatttttttcaattatttcttaaaattcataaaatctgttgaaatt----------cataaaa 31314573  T
Q  127 tcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaa 226  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||         |||||||||  ||||| ||||||    
T  31314572 tcatttcaaatcctttaaaatcttataaattaaatccattgaaatccttaatagttttttaaaatcat---------caaaatcttacaaagtcttttaa 31314482  T
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31314481 aatcctcaatacttttttaaacaaaaattgtcctttaaaatcttaatccaatacaccccc 31314422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 37046339 - 37046093
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||| |||| || |||||||||||    
T  37046339 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaatttataaaatctgttgaaatctcttaaattccataaaatc 37046240  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||         ||||||| |  ||||| ||||||||    
T  37046239 atttcaaatcctttaaaatcttatgaattaaatctattgaaatccttaacagtcttttaaaatcat---------caaaatcctccaaagtcttttaaaa 37046149  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    || |||| |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  37046148 tcatcaatacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 37046093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 27453964 - 27453708
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||  |||||   |||||||| |||| |||||||||||||| |||| | ||||||||||||||||||    
T  27453964 tttattgagattttgtgaaagagagtgtgttatgattttttttttcaattatttattaatattcataaaatctgctgaagtctcttgaaatccataaaat 27453865  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||| ||||||||||||| | ||| ||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||  ||  |||| |||||||    
T  27453864 cattttaaatcctttaaaaccttatgaattaaatctattgaaatctttaatagtcttttaaaataattaaagtcatcaaaattatgctaagtcttttaaa 27453765  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||| |||| ||||||||||||||||||| || ||||||||| |||||||||||||||    
T  27453764 atcttcaaaacttttttaaacaaaaattatcatttaaaatcctaattcaatacaccc 27453708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 41880831 - 41880594
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||      ||   |||||||||||||||| ||||||||          |||||||||||    
T  41880831 tttattgagattttgtgaaagagagtgtgttatgatatttttt------ttcaataaaattcataaaatcagttgaaat----------ccataaaatca 41880748  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||  ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  41880747 tttcaaattttttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaat 41880648  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  41880647 cctcatgacttttttaaacaaaaattgtcctttaaaatcctaatccaatacacc 41880594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 40536812 - 40536566
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||| ||  |||||   |||||||||||||||||||||||||||||||||||          |||||||||    
T  40536812 tttattgagattttgtgaaagagagtgtgttataatcatttttttcaattatttcttaaaattcataaaatctgttgaaat----------ccataaaat 40536723  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
     |||||||| ||||||||||| ||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  40536722 aatttcaaagcctttaaaatcttatgaattaaatccattgaaatcttatatagtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaa 40536623  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  40536622 atccccaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccc 40536566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 42787043 - 42787289
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||||||||||||||||||| |||||||||||  || ||   ||||||||||||||| |||||||||||          ||||||||||| |||||    
T  42787043 tttattgagattttgtgaaagagaatgtgttatgatcattctttccaattatttcttaaaagtcataaaatct----------cttgaaatccacaaaat 42787132  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || ||| | |||||||    
T  42787133 catttcaaatcctttaaaattttataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcataaaaattctgcaaaatcttttaaa 42787232  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||| ||||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  42787233 atcttcaagacttttttaaacaaaaattgtcctttaaaattctaatccaatacaccc 42787289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 37 - 228
Target Start/End: Original strand, 1113564 - 1113756
Alignment:
Q  37 agattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaa 135  Q
    ||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  1113564 agattttgtaaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatatgttgaaatatcttgaaatccataaaatcattttaa 1113663  T
Q  136 atcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    ||||||||||||| ||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||    
T  1113664 atcctttaaaatcttatgaattaaatccattaaaatgtttaatagtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaaa 1113756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 76 - 279
Target Start/End: Complemental strand, 46635435 - 46635241
Alignment:
Q  76 ttatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcctt 175  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  46635435 ttatttcttaaaatttataaaatctattgaaatctcttgaaatccataaaatcatttcaaattctttaaaatcttatgaattaaatccattgaaatcctt 46635336  T
Q  176 aatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattc 275  Q
    |||||||||||||||||||         |||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||| |    
T  46635335 aatagtcttttaaaatcat---------caaaatcttgcaaagtcttttaaaatcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatcc 46635245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 95 - 273
Target Start/End: Original strand, 47599235 - 47599413
Alignment:
Q  95 aaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcat 194  Q
    |||||||||||||| |||||||||  ||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  47599235 aaatctgttgaaatctcttgaaatttataaaatcatttcaaatgctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcat 47599334  T
Q  195 caaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    |||||||||||||||| |   |||| |||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  47599335 caaagtcatcaaaatcctccgaagtcttttaaaatccttaagacttttttaagcaaaaattgtcctttaaaatcctaat 47599413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 105 - 267
Target Start/End: Complemental strand, 39479306 - 39479144
Alignment:
Q  105 aaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatc 204  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  39479306 aaatctcttgaaatccataaaattatttcaaatcctttaaaatcttaagaattaaatccattaaaatccttaatagtcttttataatcatcaaagtcatc 39479207  T
Q  205 aaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||| | |||| | ||||||||||||||||||||||||||||||||||| |||||||||||    
T  39479206 aaaatcctctaaaatcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaat 39479144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 112 - 284
Target Start/End: Original strand, 23465400 - 23465573
Alignment:
Q  112 ttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatct 211  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||     
T  23465400 ttgaaatccataaaatcatttcaaattctttaaaatcttatgaattaaatctattgaaatccttaataatcttttaaaatcatcaaattaatcaaaatcc 23465499  T
Q  212 tgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtccttt-aaaatcttaattcaatacaccc 284  Q
    || | ||| ||||||||| || ||||||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  23465500 tgcagagtcttttaaaattcttaagacttttttaaacaaaaattgtcctttaaaaatcctaatccaatacaccc 23465573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 26 - 284
Target Start/End: Original strand, 16020490 - 16020725
Alignment:
Q  26 attttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataa 124  Q
    |||||||||||||||||||||||| ||||||||||||  || |||||  |||| |||||||||||||||||||||||||||          |||||||||    
T  16020490 attttttattgagattttgtgaaatagagtgtgttattgtatttttttcaattgtttcttaaaattcataaaatctgttga----------aatccataa 16020579  T
Q  125 aatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagtttttt 224  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         ||||| ||||| |  ||||| ||||    
T  16020580 aatcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatctaaatcctccaaagtctttt 16020670  T
Q  225 aaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||     ||||||||||||||||||||||||||||||  |||| ||||||||||    
T  16020671 aaaatcct-----cttttttaaacaaaaattgtcctttaaaattctaatccaatacaccc 16020725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 198
Target Start/End: Original strand, 53276203 - 53276358
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcattt 132  Q
    |||||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  53276203 ttgagattttgtgaaagatagtgtgttatgatatttttttcaattatttcttaaaattcataatatctgttgaaatctcttgaaatccataaaatcattt 53276302  T
Q  133 caaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaa 198  Q
    ||||| |||||||||| ||| ||||||||          |||||||||||||||||||||||||||    
T  53276303 caaattctttaaaatcttatgaattaaat----------ccttaatagtcttttaaaatcatcaaa 53276358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 30 - 196
Target Start/End: Complemental strand, 7246942 - 7246785
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||| ||||| |||||  |||||  |||||||||||||||||||||||||| ||||||||          ||||||||||    
T  7246942 tttattgagattttgtgaaagagaatgtgtaatgatttttttttcaattatttcttaaaattcataaaatccgttgaaat----------ccataaaatc 7246853  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatca 196  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||| ||||||    
T  7246852 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccataataatcttttaaagtcatca 7246785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 93 - 287
Target Start/End: Original strand, 42721861 - 42722044
Alignment:
Q  93 taaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatc 192  Q
    |||||||| ||||||| |  | |||||||||||||| ||||||||||||||||||| ||| |  ||||||| ||||||||| |          |||||||    
T  42721861 taaaatcttttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatccat----------taaaatc 42721950  T
Q  193 atcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    || |||||||| |||||| || ||||| |||||||||||| |||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||    
T  42721951 atgaaagtcattaaaatcatgcaaagtcttttaaaatccttaagacttttt-aaataaaaaatgtcctttaaaatcttaatccaatacaccccct 42722044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 44770592 - 44770482
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    ||||||||||||||||||||||||||| ||||||    ||| | |||||||||| | || |||||||||||||||||||||||||||||||| |||||||    
T  44770592 atagtcttttaaaatcatcaaagtcattaaaatccaacaaaatcttttaaaatctttaaaacttttttaaacaaaaattgtcctttaaaatcataattca 44770493  T
Q  277 atacaccccct 287  Q
    |||||||||||    
T  44770492 atacaccccct 44770482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 93 - 283
Target Start/End: Original strand, 26340475 - 26340654
Alignment:
Q  93 taaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatc 192  Q
    |||||||| ||||||| |  | |||||||||||||| ||||||||||||||||||| ||| |  ||||||| ||||||||          | ||||||||    
T  26340475 taaaatcttttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatc----------tattaaaatc 26340564  T
Q  193 atcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    || |||||||| |||||| || ||||| |||||||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||||||    
T  26340565 atgaaagtcattaaaatcatgcaaagtcttttaaaatccttaagac-tttttaaataaaaattgtcctttaaaatcctaatccaatacacc 26340654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 5104924 - 5105039
Alignment:
Q  173 cttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaa 272  Q
    |||||||||||||||||||| | |||||||| ||||||||  ||||| ||||||||||| |||||||||||| |   ||||||||| ||||||||| |||    
T  5104924 cttaatagtcttttaaaatcttaaaagtcattaaaatctttcaaagtcttttaaaatccacaagactttttttatacaaaattgtcttttaaaatcctaa 5105023  T
Q  273 ttcaatacacccccta 288  Q
    | ||||||||||||||    
T  5105024 tccaatacacccccta 5105039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 1045210 - 1045323
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaat-taaatccatt 166  Q
    ||||| |||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||| ||| |||  |||||||||    
T  1045210 tttttcaattatttcttaaagttcataaaatctgttga----------aatccataaaatcatttcaaatcctttaaaatcttatgaatcaaaatccatt 1045299  T
Q  167 gaaatccttaatagtcttttaaaa 190  Q
    ||||||||||||| ||||||||||    
T  1045300 gaaatccttaataatcttttaaaa 1045323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 284
Target Start/End: Complemental strand, 7246635 - 7246547
Alignment:
Q  196 aaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||  |  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  7246635 aaagtcatcaaaattctccaaagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcataatccaatacaccc 7246547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 8712251 - 8712436
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagt 181  Q
    ||||||||| ||||||| | ||||||| |  | ||||| |||||||||||||||||||||||||||| ||| |  ||||||||||||||||| | |||||    
T  8712251 cttaaaattaataaaatattttgaaatcttat-aaatcgataaaatcatttcaaatcctttaaaatcttatgatgtaaatccattgaaatcc-tgatagt 8712348  T
Q  182 cttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaataca 281  Q
    ||||||||||||| ||||||                   |||||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  8712349 cttttaaaatcatgaaagtc-------------------ttttaaaatcttcaagacttttttaagcaaaaattgtcctttaaaatcataatccaataca 8712429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 7249754 - 7249645
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||||| |||||||||||||||||||||||||||  |||||   ||||||||||||||||||||| |||||||||          |||||||||||||    
T  7249754 tttattga-attttgtgaaagagagtgtgttatgatcatttttttcaattatttcttaaaattcatagaatctgttg----------aaatccataaaat 7249666  T
Q  128 catttcaaatcctttaaaatc 148  Q
    |||||||||||||||||||||    
T  7249665 catttcaaatcctttaaaatc 7249645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 9163671 - 9163773
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctc-aagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    |||||||||||||| |||||||| |||||| || ||| | ||||||||||||| ||||| |||||||||||||||| || ||||||||| |||| |||||    
T  9163671 tcttttaaaatcataaaagtcattaaaatcatggaaaatcttttaaaatcctcaaagacatttttaaacaaaaattatcttttaaaatcataatccaata 9163770  T
Q  280 cac 282  Q
    |||    
T  9163771 cac 9163773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 115 - 285
Target Start/End: Original strand, 11090684 - 11090867
Alignment:
Q  115 aaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc------------ttaatagtcttttaaaatcatcaaagtca 202  Q
    ||||| |||||||||||| ||||||||||||||| ||| |  |||||||||||||||||            || |||||||||||||||||| |||||||    
T  11090684 aaatctataaaatcattttaaatcctttaaaatcttatgatgtaaatccattgaaatccaaattataaaacttcatagtcttttaaaatcatgaaagtca 11090783  T
Q  203 tcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaa-atcttaattcaatacacccc 285  Q
    |  ||||| |  ||| | |||||||||| ||||||||||||||| |||| ||||||||||||| ||  |||| |||||||||||    
T  11090784 ttgaaatcatacaaaatcttttaaaatcttcaagacttttttaagcaaacattgtcctttaaagattctaatccaatacacccc 11090867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 20021923 - 20022032
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||||| |||||||| |||||| |  ||| | |||||||||| |  |||||||||||| |||||||||| ||||||| || |||| ||    
T  20021923 atagtcttttaaaatcatgaaagtcattaaaatcctacaaaatcttttaaaatctttgagacttttttaagcaaaaattgttctttaaagtcataatcca 20022022  T
Q  277 atacaccccc 286  Q
    ||||||||||    
T  20022023 atacaccccc 20022032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 41581536 - 41581433
Alignment:
Q  180 gtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaata 279  Q
    ||||||||||||||| | |||||| |||||  |  ||||| ||||||| | ||||||||||||||||| |||||||||  ||||||||| ||||||||||    
T  41581536 gtcttttaaaatcatgagagtcattaaaattatacaaagtcttttaaatttctcaagacttttttaaataaaaattgttatttaaaatcataattcaata 41581437  T
Q  280 cacc 283  Q
    ||||    
T  41581436 cacc 41581433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 283
Target Start/End: Original strand, 28371399 - 28371501
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatac 280  Q
    |||||||||| |||||||||||| |||||  |  ||| | |||||||||  | || |||||||||| ||||||||||||||||||||| |||||||||||    
T  28371399 tcttttaaaaccatcaaagtcattaaaattctagaaaatattttaaaatgtttaaaacttttttaagcaaaaattgtcctttaaaatcctaattcaatac 28371498  T
Q  281 acc 283  Q
    |||    
T  28371499 acc 28371501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 12913886 - 12913938
Alignment:
Q  235 agacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  12913886 agacttttttaagcaaaaattgtcctttaaaatcttaatccaatacaccccct 12913938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 157 - 288
Target Start/End: Complemental strand, 28099812 - 28099681
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | | |||||||||  | |||||||| ||||||||| | | | |||||||||     ||||||||| | ||||||||||    
T  28099812 taaatcccttgaaatccttgagaattttttaaaattctaaaagtcattaaaatcttgcataatcttttaaaatttattagactttttcatacaaaaattg 28099713  T
Q  257 tcctttaaaatcttaattcaatacacccccta 288  Q
    || ||||||||| |||||||||||||||||||    
T  28099712 tcttttaaaatcctaattcaatacacccccta 28099681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 36478920 - 36478837
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcct 260  Q
    |||||||||||||| | | |||||||| |||||| |  ||||| |||||||||| ||||||||||||||| |||||||||||||    
T  36478920 atagtcttttaaaaccgtgaaagtcattaaaatcctacaaagtcttttaaaatcttcaagacttttttaagcaaaaattgtcct 36478837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 205 - 287
Target Start/End: Original strand, 45341586 - 45341667
Alignment:
Q  205 aaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||| || ||||| ||||||||| || ||||| |||| |||||||||||||||||||||||  |||| |||||||||||||    
T  45341586 aaaatcatgcaaagtcttttaaaattcttaagacctttt-aaacaaaaattgtcctttaaaattctaatgcaatacaccccct 45341667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 21309151 - 21309038
Alignment:
Q  174 ttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    |||||||| |||||||||| | |||||||| ||||| ||  || || |||||||| |  || || ||||||||| |||| || || ||||||||||||||    
T  21309151 ttaatagtgttttaaaatcttaaaagtcattaaaattttacaatgtcttttaaaacctacatgatttttttaaataaaatttatcttttaaaatcttaat 21309052  T
Q  274 tcaatacaccccct 287  Q
     |||||||||||||    
T  21309051 ccaatacaccccct 21309038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 45341502 - 45341582
Alignment:
Q  93 taaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    |||||||| ||||||| |  | |||||||||||||| ||||||||||||||||||| ||| |  ||||||| |||||||||    
T  45341502 taaaatcttttgaaatcttataaaatccataaaatcttttcaaatcctttaaaatcttatgatgtaaatccgttgaaatcc 45341582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 16019849 - 16019912
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagactt 240  Q
    |||||||||||||||| | |||||||| ||||||||| ||||| ||||||||||| | ||||||    
T  16019849 atagtcttttaaaatcttaaaagtcatgaaaatcttgcaaagtcttttaaaatccactagactt 16019912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 37369535 - 37369431
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatac 280  Q
    |||||||||||| | |||||||| ||||||||| | ||| ||||||||||| | ||||||||| |   |||| ||||  ||||||||| |||| ||||||    
T  37369535 tcttttaaaatcttaaaagtcattaaaatcttgcatagtcttttaaaatccactagactttttcatgtaaaa-ttgttttttaaaatcctaatccaatac 37369437  T
Q  281 accccc 286  Q
    ||||||    
T  37369436 accccc 37369431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 1045139 - 1045174
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgat 65  Q
    |||||||||||||||||||||| |||||||||||||    
T  1045139 tttattgagattttgtgaaagaaagtgtgttatgat 1045174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 7249610 - 7249548
Alignment:
Q  216 aagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaat 278  Q
    |||| ||||||||| || |||| ||||||||||||||||| ||| |||||||| |||| ||||    
T  7249610 aagtcttttaaaatactaaagatttttttaaacaaaaattatccattaaaatcctaatccaat 7249548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 56444429 - 56444379
Alignment:
Q  235 agacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
    |||||||||||   |||||||||||||||||||  ||||||||||||||||    
T  56444429 agacttttttatgtaaaaattgtcctttaaaatgctaattcaatacacccc 56444379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 1045321 - 1045374
Alignment:
Q  215 aaagttttttaaaatcctcaa-gacttttttaaacaaaaattgtcctttaaaat 267  Q
    ||||| |||||||||||| || |||||||||||||||||||| ||| |||||||    
T  1045321 aaagtcttttaaaatccttaaagacttttttaaacaaaaattatccattaaaat 1045374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 288
Target Start/End: Complemental strand, 36727629 - 36727576
Alignment:
Q  235 agacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    |||||||||||| |||||||| |||| ||||||  |||| ||||||||||||||    
T  36727629 agacttttttaagcaaaaattttcctctaaaatactaatccaatacacccccta 36727576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 7853917 - 7853813
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||| | |||||||| ||||| ||| | | | ||||||||| | | ||| ||||| |  | ||||||||| |||||||| ||||| ||    
T  7853917 atagtcttttaaaatcttaaaagtcattaaaattttgcatattcttttaaaattcactagattttttcatgctaaaattgtcttttaaaatattaatcca 7853818  T
Q  277 ataca 281  Q
    |||||    
T  7853817 ataca 7853813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 39307066 - 39307010
Alignment:
Q  80 ttcttaaaattcataaaatctgttgaaattt-cttgaaatccataaaatcatttcaa 135  Q
    ||||||||||||||||||||| |||||||||   | |||||||||||||| ||||||    
T  39307066 ttcttaaaattcataaaatcttttgaaatttgaataaaatccataaaatcttttcaa 39307010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 42937049 - 42936794
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42937049 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 42936950  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  42936949 atttcaaatcttttaaaatcttatgaattaaatccattgaaatccttaatagtctttcaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 42936850  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  42936849 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccc 42936794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 287
Target Start/End: Complemental strand, 5576389 - 5576132
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    |||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  5576389 tttattgagattttgtgaaagatagtgtgttatgatattttttcaattattttttaaaattcataaaatccgttgaaatctcttgaaattcataaaatca 5576290  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  5576289 tttcaaatcctttaaaatcttatgaattaaatccattgaaatctttaatagtcttttaaaatcatcaaagtcgtcaaaatcttgcaaagtcttttaaaat 5576190  T
Q  230 cctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    || |||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  5576189 ccccaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 5576132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 10391950 - 10391693
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||| ||||||||  |||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10391950 tttattgagattttatgaaagaggatgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 10391851  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  10391850 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 10391751  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||    
T  10391750 tcctcaagacttttttaaacaaaaattatcctttaaaattctaatccaatacaccccc 10391693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 68 - 287
Target Start/End: Original strand, 33850823 - 33851042
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  33850823 tttttcaattatttcttaaaattcataaaatctgttgaaatatcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattg 33850922  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33850923 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 33851022  T
Q  268 cttaattcaatacaccccct 287  Q
    | |||| |||||||||||||    
T  33851023 cctaatccaatacaccccct 33851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 24501578 - 24501324
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||| ||||||| |||||||| ||||||| |||||||||||||||||||    
T  24501578 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttctaaaaattcgtaaaatctcttgaaatctcttgaaatccataaaatc 24501479  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  24501478 atttcaaatcctttaaaatcttatgaattaaatcaattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaaatcttttaaaa 24501379  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  24501378 tcctcaagatttttttaaacaaaaattgtcctttaaaatcctaatccaatacacc 24501324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 42937845 - 42938093
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42937845 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 42937944  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||| ||||||||    
T  42937945 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatcttgcaaagtcttttaaaa 42938035  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  42938036 tcctcaagacttttttaaacaaaaattgtccattaaaatcctaatccaatacaccccc 42938093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 23115025 - 23114771
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||||||||||||| || |||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23115025 tttattgagattttgtgaaagagagtgtgttatggtatttttttcaattgtttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 23114926  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |   |||| ||||||||    
T  23114925 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaaatcatccaaatcctcccaagtcttttaaaa 23114826  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||    
T  23114825 tcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatctaatacacc 23114771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 42735052 - 42734814
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42735052 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 42734953  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||                   ||||||||    
T  42734952 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtc-------------------ttttaaaa 42734872  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||    
T  42734871 tcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccccc 42734814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 34 - 288
Target Start/End: Complemental strand, 26374112 - 26373868
Alignment:
Q  34 ttgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcattt 132  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||| |||||||| ||||||||          ||||||||||||||    
T  26374112 ttgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaatttataaaatccgttgaaat----------ccataaaatcattt 26374023  T
Q  133 caaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcct 232  Q
    |||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  26374022 caaatcatttcaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaag-tttttaaaatctt 26373924  T
Q  233 caagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    |||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  26373923 caagacttttttaaacaaaaattgtcctttaaaatcctaatccagtacacccccta 26373868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 68 - 281
Target Start/End: Original strand, 41479646 - 41479850
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||     
T  41479646 tttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatcatttcaaatcctttaaaatcttatgaattaaatccatta 41479745  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||| ||||||||||||||||||         |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  41479746 aaattcttaatagtcttttaaaa---------tcatcaaaatcttacaaagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaat 41479836  T
Q  268 cttaattcaataca 281  Q
    | |||| |||||||    
T  41479837 cctaatccaataca 41479850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 30 - 283
Target Start/End: Original strand, 43959912 - 43960156
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||| ||||||||||||||||||||| || |||||| |||||  |||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  43959912 tttatagagattttgtgaaagagagtgcgt-atgatatttttttcaattgttttttaaaattcataaaatctgttgaaatctcttaaaatccataaaatc 43960010  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         ||||||||||| |  ||||| ||||||||    
T  43960011 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatcctccaaagtcttttaaaa 43960101  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    || |||||| |||||||||||||||||||||||||||||| || | |||||||||    
T  43960102 tcttcaagatttttttaaacaaaaattgtcctttaaaatcctagtccaatacacc 43960156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 68 - 284
Target Start/End: Complemental strand, 7506645 - 7506439
Alignment:
Q  68 tttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattg 167  Q
    ||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  7506645 tttttcaattatttcttaaaattcataaaatctgttgaaat----------ccataaaatcatttcaaatcctttaaaatcttatgaattaaatccattg 7506556  T
Q  168 aaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaat 267  Q
    |||||||||||| |||||||||||||||||| | ||||||||||   ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  7506555 aaatccttaataatcttttaaaatcatcaaattaatcaaaatctatcaaagtcttttaaaatccttaagacttttttaaacaaaaattgtcctttaaaat 7506456  T
Q  268 cttaattcaatacaccc 284  Q
    | |||| ||||||||||    
T  7506455 cctaatccaatacaccc 7506439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 116 - 284
Target Start/End: Complemental strand, 32711297 - 32711129
Alignment:
Q  116 aatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgta 215  Q
    ||||||||||||||||||||||||||| |||||  || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  32711297 aatccataaaatcatttcaaatcctttcaaatctcatgaattaaatctattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctgca 32711198  T
Q  216 aagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||    
T  32711197 aagtcttttaaaatcctcaagacttttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 32711129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 2704529 - 2704387
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  2704529 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttgaaatatcttaaaatccataaaat 2704430  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaa 170  Q
     |||||||||||||||||||| ||| |||||||||||||||||    
T  2704429 tatttcaaatcctttaaaatcttatgaattaaatccattgaaa 2704387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 24214795 - 24214690
Alignment:
Q  179 agtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaat 278  Q
    |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  24214795 agtcttttaaaatcatcaaagtcatcaaaatcctgcaaagtcttttaaaatcctcaaggcttttttaaacaaaaattgtcttttaaaatcctaattcaat 24214696  T
Q  279 acaccc 284  Q
    ||||||    
T  24214695 acaccc 24214690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 147
Target Start/End: Original strand, 8543752 - 8543861
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgat--agtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||    ||||| ||||||||||||||| || |||||||          | ||||||||||||||||    
T  8543752 tttattgagattttgtgaaagagagtgtgttatgatcatttttttcaattatttcttaaaaatcgtaaaatc----------tattgaaatccataaaat 8543841  T
Q  128 catttcaaatcctttaaaat 147  Q
    ||||||||||||||||||||    
T  8543842 catttcaaatcctttaaaat 8543861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 262
Target Start/End: Complemental strand, 33972005 - 33971920
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtccttt 262  Q
    |||||||||||||| |||||||||||| |||||  || | ||| |||||||||||| |||||||||||||| ||||||||||||||    
T  33972005 atagtcttttaaaaccatcaaagtcattaaaattctgcagagtcttttaaaatccttaagacttttttaaataaaaattgtccttt 33971920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 286
Target Start/End: Complemental strand, 39189558 - 39189449
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||||| |||||||| |||||| |  ||| | |||||||||| |  |||||||||||| | ||||||||||||||||||| ||||  |    
T  39189558 atagtcttttaaaatcatgaaagtcattaaaatcctacaaaatcttttaaaatctttgagacttttttaagctaaaattgtcctttaaaatcctaatcta 39189459  T
Q  277 atacaccccc 286  Q
    ||||||||||    
T  39189458 atacaccccc 39189449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 33574725 - 33574803
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaat 108  Q
    |||||||| |||||||||||||||||||  |   ||| ||||| |||||||| ||||||||||||||||||||||||||    
T  33574725 tttattgaaattttgtgaaagagagtgttatgatatattttttcaattattttttaaaattcataaaatctgttgaaat 33574803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 37915543 - 37915612
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||| |||| ||||| ||||    
T  37915543 aaagtcttttaaaatcctctagaattttttaaacaaaaattgtcatttaaaatcctaatccaatataccc 37915612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 145
Target Start/End: Original strand, 41070369 - 41070434
Alignment:
Q  80 ttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaa 145  Q
    |||||||||||||||||| || ||||||| |  | ||||||||||||| |||||||||||||||||    
T  41070369 ttcttaaaattcataaaaacttttgaaatcttataaaatccataaaattatttcaaatcctttaaa 41070434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 41479573 - 41479610
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgat 65  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41479573 tttttattgagattttgtgaaagagagtgtgttatgat 41479610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 29930412 - 29930316
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    ||||||||||||||| |  |||||| | |||||| |  ||| | |||||||||||  | |||||||||||||||||||| |||||||||||| ||||    
T  29930412 atagtcttttaaaattactaaagtcgttaaaatcctacaaaatcttttaaaatccaaatgacttttttaaacaaaaattatcctttaaaatcctaat 29930316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 173
Target Start/End: Complemental strand, 29976945 - 29976858
Alignment:
Q  85 aaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaaatcc 173  Q
    ||||||||||||||||  |||||| | |  ||||||||||||| |||||||||||||||||||| ||| |  |||||| ||||||||||    
T  29976945 aaaattcataaaatcttgtgaaatct-taaaaatccataaaataatttcaaatcctttaaaatcttatgatgtaaatctattgaaatcc 29976858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 7506716 - 7506681
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgat 65  Q
    ||||||||||||||||||||||||||||||||||||    
T  7506716 tttattgagattttgtgaaagagagtgtgttatgat 7506681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 13478093 - 13478038
Alignment:
Q  82 cttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaat 137  Q
    ||||||||||||||||||| |||||||||  | |||| ||||||||||||||||||    
T  13478093 cttaaaattcataaaatcttttgaaattttataaaattcataaaatcatttcaaat 13478038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 16365302 - 16365375
Alignment:
Q  215 aaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccctag 289  Q
    ||||| |||||||||| | ||||||||||| |  |||| ||||| ||||||||| ||||||||||||||||||||    
T  16365302 aaagtcttttaaaatcttaaagactttttttattaaaa-ttgtcttttaaaatcctaattcaatacaccccctag 16365375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 2475534 - 2475622
Alignment:
Q  80 ttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttcaaatcctttaaaatcgtataaattaaatccattgaa 169  Q
    ||||||||||| ||||||||| || |||| |  |||| |||||||||||| || |||| |||||||||| ||| | ||||||||||||||    
T  2475534 ttcttaaaatttataaaatcttttaaaatattgtgaa-tccataaaatcaatttaaatactttaaaatcttatgatttaaatccattgaa 2475622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 4403592 - 4403641
Alignment:
Q  235 agacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||||||| || ||||| |||||||||||| |||||||||||||||    
T  4403592 agacttttttaagcacaaattatcctttaaaatcataattcaatacaccc 4403641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 13477861 - 13477816
Alignment:
Q  239 ttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||    
T  13477861 ttttttaaacaaaaattatcctttaaaatcctaatccaatacaccc 13477816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 234 - 283
Target Start/End: Complemental strand, 18306638 - 18306589
Alignment:
Q  234 aagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||| |||||||||||| |||||||||||||||| ||||| ||||||||    
T  18306638 aagacatttttaaacaaatattgtcctttaaaatcctaattgaatacacc 18306589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 33972098 - 33972062
Alignment:
Q  112 ttgaaatccataaaatcatttcaaatcctttaaaatc 148  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33972098 ttgaaatccataaaatcatttcaaattctttaaaatc 33972062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 30 - 283
Target Start/End: Complemental strand, 7016522 - 7016268
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7016522 tttattgagattttgtgaaaaagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 7016423  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  7016422 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaa 7016323  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacc 283  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||    
T  7016322 tcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatcaaatacacc 7016268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 30 - 287
Target Start/End: Complemental strand, 33655838 - 33655579
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    |||||| |||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  33655838 tttattaagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatctgttgaaatctcttaaaatccataaaat 33655739  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  33655738 catttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaa 33655639  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||    
T  33655638 atcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatctaatacactccct 33655579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 30 - 286
Target Start/End: Original strand, 21147573 - 21147827
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  21147573 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgt---aatctcttgaaatccataaaatc 21147669  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  21147670 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttggaaaatcttttaaaa 21147769  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  21147770 tcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 21147827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 28 - 287
Target Start/End: Original strand, 849721 - 849972
Alignment:
Q  28 tttttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaa 126  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  849721 tttttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaa 849820  T
Q  127 tcatttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaa 226  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||| || |||    
T  849821 tcatttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaa---------tcatcaaaatcttgcaaagtcttataa 849911  T
Q  227 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccct 287  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  849912 aatcctcaagacttttttaaacaaaaattgtcctttaaaatcctaatccaatacaccccct 849972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 36 - 286
Target Start/End: Complemental strand, 5272688 - 5272437
Alignment:
Q  36 gagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatcatttca 134  Q
    ||||||||||||||||||||||||||| ||| |||||  |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  5272688 gagattttgtgaaagagagtgtgttataatatttttttcaattattttttaaaatttataaaatctgttgaaatctcttgaaatccataaaatcatttca 5272589  T
Q  135 aatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctca 234  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  5272588 aatcctttaaaatcttattaattaaatccattgaaatctttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaagtcttttaaaatcctca 5272489  T
Q  235 agacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    | |    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  5272488 aaaaaaatttaaacaaaaattgtcctttaaaatcctaatccaatacaccccc 5272437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 30 - 286
Target Start/End: Complemental strand, 43319475 - 43319227
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  43319475 tttattgagattttgtgaaagagagtttgttatgatatttttttcaattatttcttaaaatttataaaatctgttgaaatctcttgaaatccataaaatc 43319376  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||         |||||||||| ||||| ||||||||    
T  43319375 atttcaaatccttcaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcat---------caaaatcttgcaaagtcttttaaaa 43319285  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccccc 286  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||    
T  43319284 tcctcaagacttttttaaacaaaaattgtcttttaaaatcctaatccaatacatcccc 43319227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 30 - 288
Target Start/End: Original strand, 139650 - 139900
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  139650 tttattgagattttgtgaaagagagtgtgttatgatatttttttcaattatttcttaaaattcataaaatctgttgaaatctcttgaaatctataaaatc 139749  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||   ||       ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||||    
T  139750 atttcaaat---tt-------tatgaattaaatctattgaaatccttaatagtcttttaaaattatcaaagtcatcaaaatcctgcaaagtcttttaaaa 139839  T
Q  229 tcctc-aagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccccta 288  Q
    || || |||||||||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  139840 tcttcaaagacttttttaaacaaaaattatcctttaaaatcataatccaatacacccccta 139900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 4772013 - 4771768
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||| |||||||||||||| |||||  |||||||| |||||||| || ||||||||||||||          ||||||||||    
T  4772013 tttattgagattttgtgaaagatagtgtgttatgatattttttttaattattttttaaaatttatgaaatctgttgaaat----------ccataaaatc 4771924  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||||||    
T  4771923 atttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcattaaaattctgtaaagtcttttaaaa 4771824  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||  |||||||||    
T  4771823 tcctcaaaacttttttaaacaaaaattgtcctttaaaatcctaatcaaatacaccc 4771768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 30 - 232
Target Start/End: Complemental strand, 32157775 - 32157573
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagtttttaaattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatca 129  Q
    |||||||||||||||||||||| |||||||||||||| ||| | ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  32157775 tttattgagattttgtgaaagaaagtgtgttatgatattttgtcaattatttcttaaaattcataaaaattgttgaaatatcttgaaatccataaaatca 32157676  T
Q  130 tttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaat 229  Q
    ||||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    ||||| |||||||||    
T  32157675 tttcaaatcttttaaaatctcatgaattaaatccattgaaatccttaatagtcttttaaaataatcaaaatcatcaaaatcacacaaagtcttttaaaat 32157576  T
Q  230 cct 232  Q
    |||    
T  32157575 cct 32157573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 30 - 273
Target Start/End: Original strand, 6461170 - 6461405
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||| |||||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||   || |||||| |||||||    
T  6461170 tttattgagattttatgaaagagagtgtgttatgatatttttttcaattattttttaaaattcataaaatctgttgaaatcctttaaaatccttaaaatc 6461269  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaa 228  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||         ||||||||||| || ||| | ||||||||    
T  6461270 atttcaaatcctttaaaatcttatgaattaaatccattgaaatctttaatagtcttttaaaa---------tcatcaaaatcctgcaaaatcttttaaaa 6461360  T
Q  229 tcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    | ||||| ||||||||||||||||||| |||||||||||| ||||    
T  6461361 ttctcaaaacttttttaaacaaaaattatcctttaaaatcctaat 6461405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 27458812 - 27458680
Alignment:
Q  152 taaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaa 251  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  27458812 taaaataaatacattgaaatccttaataatcttttaaaatcatcaaagtcatcaaaatctttaaaagtcttttaaaatcctcaagacttttttaaacaaa 27458713  T
Q  252 aattgtcctttaaaatcttaattcaatacaccc 284  Q
    ||||||||||||||||| |||| ||||||||||    
T  27458712 aattgtcctttaaaatcctaatccaatacaccc 27458680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 9840079 - 9839977
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatac 280  Q
    |||||||||||| | ||||||||  |||||||  ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||  |||| |||||    
T  9840079 tcttttaaaatcttaaaagtcattcaaatctttcaaagttttttaaaatccacaagacttttttatacaaaaattgtcttttaaaatccaaattaaatac 9839980  T
Q  281 acc 283  Q
    |||    
T  9839979 acc 9839977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 8408686 - 8408789
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattca 276  Q
    |||||||||||||||||| |||||||| ||| || |  ||||| |||||||||| ||||||| |||||||   ||| ||||||||||||||  |||||||    
T  8408686 atagtcttttaaaatcatgaaagtcattaaattcatacaaagtcttttaaaatcttcaagacatttttaagtgaaagttgtcctttaaaattctaattca 8408785  T
Q  277 atac 280  Q
    ||||    
T  8408786 atac 8408789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 30582104 - 30581995
Alignment:
Q  174 ttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    |||||||||||||||| || | ||| |||  |||||  |||| ||| ||||||||||| ||||||||||| | |||||||||||| |||||| || ||||    
T  30582104 ttaatagtcttttaaagtcttaaaaatcactaaaattatgtatagtcttttaaaatccacaagactttttcatacaaaaattgtcttttaaattc-taat 30582006  T
Q  274 tcaatacaccc 284  Q
    |||||||||||    
T  30582005 tcaatacaccc 30581995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 28593104 - 28592999
Alignment:
Q  181 tcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatac 280  Q
    |||||||||||| | |||||||| ||||||||  | ||| ||||||||||| |||||| ||||| |   ||||||||| ||||||||| |||| ||||||    
T  28593104 tcttttaaaatcttaaaagtcattaaaatctttcatagtattttaaaatccacaagacctttttcatgtaaaattgtcttttaaaatcctaatccaatac 28593005  T
Q  281 accccc 286  Q
    ||||||    
T  28593004 accccc 28592999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 43319584 - 43319647
Alignment:
Q  210 cttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaat 273  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||| || ||||||||| ||||    
T  43319584 cttgcaaagtcttttaaaatcctcaaaacttttttaaacaaaaattatcttttaaaatcctaat 43319647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 28346641 - 28346554
Alignment:
Q  177 atagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaa 265  Q
    |||||||||||||||| | |||||||| ||||||||| | ||   |||||||||| ||||||||||||| ||||||||| || ||||||    
T  28346641 atagtcttttaaaatcttaaaagtcattaaaatcttgcatag-agtttaaaatccacaagacttttttatacaaaaattatcttttaaa 28346554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 7947197 - 7947134
Alignment:
Q  221 ttttaaaatcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacacccc 285  Q
    |||||||||| | ||||||||||| || |||| | ||| ||||||||| ||||||||||||||||    
T  7947197 ttttaaaatcttaaagactttttttaataaaa-tagtcttttaaaatcctaattcaatacacccc 7947134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 14837 - 14597
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14837 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaactatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaat 14738  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  14737 catttcaaatcctttaaaatcttatgaattaaatccatttaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaaatcttttaaa 14638  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatc 268  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14637 atcctcaagacttttttaaacaaaaattgtcctttaaaatc 14597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 30 - 268
Target Start/End: Complemental strand, 15480 - 15240
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15480 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaactatttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaat 15381  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||    
T  15380 catttcaaatcctttaaaatcttatgaattaaatccatttaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgcaaaatcttttaaa 15281  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatc 268  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15280 atcctcaagacttttttaaacaaaaattgtcctttaaaatc 15240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 24789 - 24533
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  24789 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatcttttgaaattttttgaaatccataaaat 24690  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||| |||||||    
T  24689 catttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcctccaaagtcttttaaa 24590  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    |||||||| |||||||||||||||||||||||||||||||  |||| ||||||||||    
T  24589 atcctcaatacttttttaaacaaaaattgtcctttaaaattctaatccaatacaccc 24533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 30 - 210
Target Start/End: Complemental strand, 37306 - 37124
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta--aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaat 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  37306 tttattgagattttgtgaaagagagtgtgttatgatattttttttcaattatttcttaaaattcataaaatcttttgaaattttttgaaatccataaaat 37207  T
Q  128 catttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatc 210  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37206 catttcaaatcctttaaaatcttatgaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatc 37124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 37912 - 37666
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||||||||||||| || |||||  || | |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37912 tttattgagattttgtgaaagagagtgtgttatggtatttttttcaaatgtttcttaaaattcataaaatctgttgaaatctcttgaaatccataaaatc 37813  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaagtcat-caaaatcttgtaaagttttttaaa 227  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||          |||||||    
T  37812 atttcaaatcctttaaaatcttatgaattaaatccattgaaattcttaatagtcttttaaaatcatcaaaatcatccaaaatc----------ttttaaa 37723  T
Q  228 atcctcaagacttttttaaacaaaaattgtcctttaaaatcttaattcaatacaccc 284  Q
    || ||||||||||||||||||||||||| |||||||||||  |||| ||||||||||    
T  37722 attctcaagacttttttaaacaaaaattatcctttaaaattctaatccaatacaccc 37666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 296 - 472
Target Start/End: Complemental strand, 11748 - 11574
Alignment:
Q  296 ttgattttctcaatttgcatttcagacagaggatccaaatctaggttaggtcatgacattcacatgtaaaacatcatattgatatcttagtaagtgtgtg 395  Q
    |||||||||||||| | ||||| |  |||||||||||||||||||||||||| |||||||||||||||| |  ||||||| |||||||||||||||||||    
T  11748 ttgattttctcaatgtacattttaatcagaggatccaaatctaggttaggtcgtgacattcacatgtaata--tcatattaatatcttagtaagtgtgtg 11651  T
Q  396 actgttcttgatgagattggagatatttcatatgacatttatgtgaagtccttgaaaaatatcgatggtcttgaact 472  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11650 actgttcttgatgagattggagatatttcatatgacatttatgtgaagtccttgaaaaatatcgattgtcttgaact 11574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 11082 - 11036
Alignment:
Q  382 ttagtaagtgtgtgactgttcttgatgagattggagatatttcatat 428  Q
    |||||||||||||| ||||||||||  || |||||||||||||||||    
T  11082 ttagtaagtgtgtggctgttcttgaaaagtttggagatatttcatat 11036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 372 - 213
Alignment:
Q  30 tttattgagattttgtgaaagagagtgtgttatgatagttttta-aattatttcttaaaattcataaaatctgttgaaatttcttgaaatccataaaatc 128  Q
    |||||||||||||||||||||||| |||||||||||| |||||  |||| ||||||||||||||||||||||          |||||||||  |||||||    
T  372 tttattgagattttgtgaaagagaatgtgttatgatatttttttcaattgtttcttaaaattcataaaatct----------cttgaaatctttaaaatc 283  T
Q  129 atttcaaatcctttaaaatcgtataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaa 198  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  282 atttcaaatcttttaaaatcttataaattaaatccattgaaatccttaatagtcttttaaaatcatcaaa 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 10991 - 10863
Alignment:
Q  157 taaatccattgaaatccttaatagtcttttaaaatcatcaaagtcatcaaaatcttgtaaagttttttaaaatcctcaagacttttttaaacaaaaattg 256  Q
    ||||||| ||||||||||| | | |||||||||||| | |||||||| | ||||||| | | | |||| |||||| | ||||||||| | | ||||||||    
T  10991 taaatcccttgaaatccttgagaatcttttaaaatcctaaaagtcattacaatcttgcataatctttttaaatccactagactttttcatataaaaattg 10892  T
Q  257 tcctttaaaatcttaattcaatacacccc 285  Q
    || ||||||||| |||| |||||||||||    
T  10891 tcttttaaaatcctaatccaatacacccc 10863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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