View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18780_high_12 (Length: 259)
Name: NF18780_high_12
Description: NF18780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18780_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 7553683 - 7553430
Alignment:
| Q |
1 |
acatcttagcagccctcatatgataatactcaagaaattagcacctcatttttatagctgacaggcttttgaaataaaaggagtccacatgactacatgc |
100 |
Q |
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| T |
7553683 |
acattttagcagccctcatatgataatactcaagaaattagcacctcatttttatagctaacaggcttttgaaataaaaggagtccacatgactacatgc |
7553584 |
T |
|
| Q |
101 |
tttcaaaatctctaactacagttctgccagtttcttctgtgcatcttttgcaacattttaaaggccaaaaatattccaccatattggcatacatgctaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
7553583 |
tttcaaaatctctaactacagttctgccagtttcttctgtgcatcttttgcaacattttaaaggccaaaattattccaccatattggcatacatgctaca |
7553484 |
T |
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| Q |
201 |
ttaacttgtataaaaactactaatatactttaaaattcttttacctttgctact |
254 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
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| T |
7553483 |
ttaacttgtataaaaactactaatatactttaaaactcttttacctttgttact |
7553430 |
T |
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