View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18780_high_17 (Length: 239)
Name: NF18780_high_17
Description: NF18780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18780_high_17 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 221
Target Start/End: Original strand, 26640646 - 26640853
Alignment:
| Q |
14 |
cagaaccaaacacgcatttaaccaaaattgcctaaatagaaatgtgtgccaataaaatgaaattttcagtttacagaaacaaaaacttggagggtttaac |
113 |
Q |
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| T |
26640646 |
cagaaccaaacacgcatttaaccaaaattgcctaaatagaaatgtgtgccaataaaatgaaattttcagtttacagaaacaaaaacttggagggtttaac |
26640745 |
T |
|
| Q |
114 |
tgtataaggaacattcctacttacatcatgtgtcaaaacacataactatagaagttagagacgtaacctgcaattcatgtattgtctttgacaccaacgt |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
26640746 |
tgtataaggaacattcctacttacatcatgtgtcaaaacacataactatagaagttagagacgtaacctgcaattcatgtattatctttgacaccaacgt |
26640845 |
T |
|
| Q |
214 |
gaacaaca |
221 |
Q |
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|||||||| |
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| T |
26640846 |
gaacaaca |
26640853 |
T |
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