View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18780_low_2 (Length: 527)

Name: NF18780_low_2
Description: NF18780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18780_low_2
NF18780_low_2
[»] chr3 (89 HSPs)
chr3 (211-515)||(9243993-9244304)
chr3 (112-211)||(46597465-46597566)
chr3 (112-210)||(46610009-46610109)
chr3 (112-209)||(10615276-10615375)
chr3 (112-213)||(15086219-15086323)
chr3 (159-213)||(37977512-37977566)
chr3 (159-210)||(54567749-54567800)
chr3 (159-212)||(10616779-10616833)
chr3 (159-212)||(18142203-18142256)
chr3 (159-208)||(48044276-48044325)
chr3 (162-212)||(18140938-18140988)
chr3 (112-215)||(22256197-22256303)
chr3 (112-211)||(28208102-28208203)
chr3 (158-212)||(11359455-11359509)
chr3 (158-212)||(45291418-45291472)
chr3 (159-212)||(7248863-7248916)
chr3 (158-210)||(22257337-22257390)
chr3 (159-211)||(28206981-28207034)
chr3 (161-210)||(29184989-29185038)
chr3 (159-212)||(31835847-31835900)
chr3 (156-216)||(2305506-2305566)
chr3 (158-210)||(12210028-12210080)
chr3 (156-208)||(24910934-24910986)
chr3 (159-215)||(38343179-38343235)
chr3 (163-211)||(46596094-46596142)
chr3 (164-212)||(51460774-51460822)
chr3 (112-197)||(3190585-3190670)
chr3 (112-197)||(3207510-3207595)
chr3 (159-209)||(4218872-4218923)
chr3 (160-211)||(12066228-12066279)
chr3 (156-211)||(49872952-49873007)
chr3 (164-210)||(47115573-47115619)
chr3 (156-214)||(49265294-49265352)
chr3 (178-211)||(6510214-6510247)
chr3 (112-145)||(10616728-10616761)
chr3 (179-212)||(20957195-20957228)
chr3 (180-213)||(27497796-27497829)
chr3 (164-213)||(27760286-27760335)
chr3 (161-210)||(29183732-29183781)
chr3 (159-211)||(38843555-38843608)
chr3 (164-209)||(52396454-52396499)
chr3 (159-211)||(15093720-15093772)
chr3 (164-216)||(17261019-17261071)
chr3 (164-212)||(25110072-25110120)
chr3 (159-207)||(31173591-31173638)
chr3 (164-212)||(49263027-49263075)
chr3 (178-210)||(49880762-49880794)
chr3 (159-214)||(51252290-51252346)
chr3 (160-207)||(4217679-4217726)
chr3 (368-419)||(7975927-7975978)
chr3 (156-210)||(8355569-8355624)
chr3 (161-211)||(24729638-24729689)
chr3 (161-212)||(24909378-24909429)
chr3 (163-210)||(31172299-31172346)
chr3 (159-217)||(37975962-37976021)
chr3 (156-211)||(39846583-39846638)
chr3 (178-212)||(14241212-14241246)
chr3 (159-212)||(18704951-18705005)
chr3 (178-208)||(22949248-22949278)
chr3 (164-210)||(41749386-41749432)
chr3 (178-212)||(53806821-53806855)
chr3 (178-214)||(4699971-4700008)
chr3 (178-207)||(8827450-8827479)
chr3 (180-221)||(9322108-9322149)
chr3 (160-197)||(12072871-12072908)
chr3 (112-145)||(14824818-14824851)
chr3 (112-145)||(14826032-14826065)
chr3 (156-193)||(19111260-19111297)
chr3 (164-213)||(19624021-19624070)
chr3 (164-209)||(29313789-29313834)
chr3 (159-212)||(43112024-43112077)
chr3 (166-203)||(43113050-43113087)
chr3 (164-221)||(45334036-45334093)
chr3 (179-212)||(51549581-51549614)
chr3 (163-212)||(54566510-54566558)
chr3 (180-212)||(7584249-7584281)
chr3 (159-210)||(11360353-11360405)
chr3 (113-145)||(12071582-12071614)
chr3 (159-210)||(14824750-14824802)
chr3 (159-211)||(14826081-14826133)
chr3 (159-212)||(23539260-23539315)
chr3 (164-212)||(30271542-30271590)
chr3 (159-211)||(34062344-34062396)
chr3 (164-212)||(35434083-35434131)
chr3 (112-144)||(37977466-37977498)
chr3 (178-214)||(47117579-47117615)
chr3 (183-219)||(49116864-49116900)
chr3 (178-210)||(51252049-51252081)
chr3 (164-212)||(54012599-54012647)
[»] chr2 (92 HSPs)
chr2 (112-213)||(23834578-23834681)
chr2 (159-216)||(38937514-38937571)
chr2 (159-214)||(16670495-16670550)
chr2 (112-210)||(38815050-38815150)
chr2 (159-212)||(23835778-23835831)
chr2 (112-211)||(1902929-1903031)
chr2 (112-211)||(1904365-1904467)
chr2 (112-210)||(7576325-7576426)
chr2 (112-213)||(18250846-18250950)
chr2 (159-212)||(19686185-19686238)
chr2 (159-213)||(7577782-7577837)
chr2 (112-211)||(18249630-18249731)
chr2 (112-210)||(44366867-44366968)
chr2 (112-210)||(38935945-38936044)
chr2 (112-210)||(5970713-5970810)
chr2 (156-211)||(22116154-22116209)
chr2 (164-211)||(38877032-38877079)
chr2 (164-214)||(28141684-28141734)
chr2 (163-212)||(15747749-15747798)
chr2 (159-211)||(22468230-22468283)
chr2 (159-211)||(22474451-22474504)
chr2 (164-220)||(18701541-18701597)
chr2 (159-211)||(30371384-30371436)
chr2 (158-213)||(3364566-3364621)
chr2 (164-211)||(19493459-19493506)
chr2 (163-209)||(22466982-22467029)
chr2 (162-212)||(28462502-28462553)
chr2 (156-211)||(39150225-39150280)
chr2 (160-211)||(41305880-41305930)
chr2 (159-210)||(44242361-44242412)
chr2 (161-215)||(5969720-5969774)
chr2 (156-210)||(12028198-12028252)
chr2 (178-212)||(17328090-17328124)
chr2 (159-212)||(21903921-21903975)
chr2 (164-214)||(22535450-22535500)
chr2 (156-212)||(85437-85494)
chr2 (159-212)||(15749014-15749067)
chr2 (178-211)||(16577372-16577405)
chr2 (180-213)||(19052200-19052233)
chr2 (156-209)||(22535686-22535739)
chr2 (178-211)||(34635705-34635738)
chr2 (157-210)||(37147551-37147604)
chr2 (163-212)||(44241095-44241144)
chr2 (164-208)||(15809386-15809430)
chr2 (178-210)||(19641446-19641478)
chr2 (178-210)||(19840039-19840071)
chr2 (178-214)||(23260316-23260352)
chr2 (178-210)||(29835102-29835134)
chr2 (164-208)||(30371607-30371651)
chr2 (178-214)||(38385931-38385967)
chr2 (112-144)||(38936998-38937030)
chr2 (112-144)||(38937465-38937497)
chr2 (156-208)||(43301882-43301934)
chr2 (161-213)||(45161389-45161440)
chr2 (156-211)||(14793458-14793513)
chr2 (164-214)||(15481485-15481536)
chr2 (156-211)||(24952058-24952113)
chr2 (164-207)||(28484603-28484646)
chr2 (178-209)||(38210865-38210896)
chr2 (115-145)||(7577736-7577766)
chr2 (158-212)||(17328330-17328384)
chr2 (159-213)||(25927127-25927181)
chr2 (156-210)||(28149669-28149723)
chr2 (156-198)||(29640775-29640817)
chr2 (164-210)||(33641132-33641178)
chr2 (164-214)||(34404601-34404651)
chr2 (159-212)||(38875986-38876040)
chr2 (156-213)||(7327765-7327822)
chr2 (159-212)||(8237987-8238040)
chr2 (112-145)||(16670566-16670599)
chr2 (112-145)||(21903992-21904025)
chr2 (112-141)||(23835730-23835759)
chr2 (159-211)||(25227822-25227875)
chr2 (180-209)||(34428638-34428667)
chr2 (112-145)||(36565303-36565336)
chr2 (112-145)||(38813643-38813676)
chr2 (112-145)||(38876057-38876090)
chr2 (112-145)||(41305949-41305982)
chr2 (112-145)||(44368341-44368374)
chr2 (113-145)||(5969796-5969828)
chr2 (159-214)||(15808721-15808777)
chr2 (156-212)||(16139119-16139175)
chr2 (156-210)||(19299762-19299818)
chr2 (156-216)||(20182258-20182318)
chr2 (178-210)||(20182519-20182551)
chr2 (180-212)||(27866192-27866224)
chr2 (163-211)||(28461067-28461114)
chr2 (164-211)||(31551908-31551956)
chr2 (156-211)||(33868474-33868530)
chr2 (156-211)||(34635945-34636001)
chr2 (159-211)||(38528504-38528556)
chr2 (178-214)||(39094195-39094230)
[»] chr5 (63 HSPs)
chr5 (112-211)||(15061780-15061881)
chr5 (112-210)||(30796579-30796679)
chr5 (112-212)||(11956137-11956240)
chr5 (163-211)||(15615102-15615150)
chr5 (112-211)||(41064143-41064245)
chr5 (112-210)||(21776863-21776964)
chr5 (159-220)||(9751682-9751743)
chr5 (112-211)||(11439756-11439855)
chr5 (159-211)||(11957654-11957707)
chr5 (112-212)||(15060161-15060264)
chr5 (112-212)||(15616456-15616559)
chr5 (112-212)||(41065613-41065716)
chr5 (159-209)||(13948588-13948638)
chr5 (159-209)||(28819537-28819587)
chr5 (112-210)||(10012764-10012863)
chr5 (112-213)||(8367955-8368057)
chr5 (112-211)||(30798535-30798636)
chr5 (159-209)||(10011619-10011669)
chr5 (159-212)||(19599968-19600022)
chr5 (162-211)||(11438338-11438387)
chr5 (158-214)||(35600543-35600600)
chr5 (164-212)||(38482316-38482364)
chr5 (164-211)||(889067-889114)
chr5 (156-211)||(10976750-10976805)
chr5 (159-210)||(11890105-11890155)
chr5 (162-212)||(19601275-19601326)
chr5 (158-213)||(23932460-23932515)
chr5 (159-214)||(26034841-26034896)
chr5 (159-210)||(37274748-37274799)
chr5 (112-197)||(40434004-40434087)
chr5 (165-211)||(15395543-15395589)
chr5 (178-212)||(29104442-29104476)
chr5 (163-211)||(9750446-9750495)
chr5 (112-145)||(21775529-21775562)
chr5 (178-211)||(22551521-22551554)
chr5 (112-145)||(29521386-29521419)
chr5 (156-211)||(711236-711292)
chr5 (178-210)||(12399611-12399643)
chr5 (159-210)||(35599312-35599364)
chr5 (156-211)||(20698523-20698578)
chr5 (164-211)||(24098674-24098721)
chr5 (178-213)||(31861488-31861523)
chr5 (156-211)||(33052816-33052871)
chr5 (158-212)||(4060457-4060511)
chr5 (164-210)||(12330854-12330900)
chr5 (164-210)||(34407904-34407950)
chr5 (184-214)||(39418766-39418796)
chr5 (112-145)||(15615170-15615203)
chr5 (156-213)||(16920659-16920716)
chr5 (164-212)||(18229747-18229796)
chr5 (178-207)||(20689053-20689082)
chr5 (164-209)||(21149112-21149156)
chr5 (158-187)||(21775485-21775514)
chr5 (158-210)||(29520136-29520186)
chr5 (112-145)||(29520202-29520235)
chr5 (178-210)||(2870909-2870941)
chr5 (159-211)||(26888463-26888515)
chr5 (164-216)||(31312782-31312834)
chr5 (112-144)||(33750986-33751018)
chr5 (164-212)||(35798694-35798742)
chr5 (178-210)||(36993008-36993040)
chr5 (178-213)||(39153413-39153449)
chr5 (112-144)||(40434544-40434576)
[»] chr7 (74 HSPs)
chr7 (112-212)||(9553398-9553501)
chr7 (112-214)||(34158054-34158158)
chr7 (159-213)||(48168847-48168901)
chr7 (161-213)||(1594132-1594184)
chr7 (158-220)||(11056719-11056782)
chr7 (156-213)||(1831982-1832039)
chr7 (112-211)||(17763335-17763437)
chr7 (112-210)||(17764656-17764757)
chr7 (162-206)||(8174888-8174932)
chr7 (159-214)||(9554265-9554321)
chr7 (164-212)||(19272460-19272508)
chr7 (162-214)||(48896475-48896527)
chr7 (158-213)||(48945181-48945236)
chr7 (159-221)||(21237351-21237413)
chr7 (156-210)||(23371449-23371503)
chr7 (159-213)||(33757407-33757461)
chr7 (156-212)||(23161098-23161155)
chr7 (159-212)||(42509044-42509097)
chr7 (159-214)||(5219042-5219098)
chr7 (156-212)||(23784582-23784638)
chr7 (160-211)||(24434906-24434958)
chr7 (178-213)||(6269525-6269560)
chr7 (159-210)||(13279423-13279474)
chr7 (156-211)||(16902340-16902394)
chr7 (156-211)||(24555904-24555959)
chr7 (156-223)||(42202148-42202215)
chr7 (159-208)||(1589387-1589437)
chr7 (178-212)||(9915649-9915683)
chr7 (178-212)||(9923561-9923595)
chr7 (159-212)||(24757997-24758051)
chr7 (164-210)||(38193205-38193251)
chr7 (158-211)||(1830811-1830864)
chr7 (112-145)||(48170218-48170251)
chr7 (112-144)||(9554216-9554248)
chr7 (165-213)||(10688455-10688503)
chr7 (178-222)||(13797636-13797680)
chr7 (178-214)||(13882599-13882635)
chr7 (159-211)||(14554454-14554506)
chr7 (164-212)||(21298256-21298304)
chr7 (178-214)||(26050428-26050464)
chr7 (178-214)||(26059787-26059823)
chr7 (179-211)||(35913310-35913342)
chr7 (156-212)||(39065381-39065437)
chr7 (178-210)||(39580191-39580223)
chr7 (159-210)||(5909713-5909764)
chr7 (113-144)||(24434980-24435011)
chr7 (164-211)||(24845637-24845684)
chr7 (164-211)||(26050174-26050221)
chr7 (164-211)||(26059533-26059580)
chr7 (112-142)||(11056803-11056833)
chr7 (180-210)||(19979651-19979681)
chr7 (156-210)||(23806229-23806283)
chr7 (156-214)||(28000121-28000179)
chr7 (156-198)||(30335385-30335427)
chr7 (156-198)||(35097601-35097643)
chr7 (164-210)||(48104739-48104785)
chr7 (178-211)||(10980621-10980654)
chr7 (178-219)||(12005255-12005296)
chr7 (164-212)||(12814592-12814641)
chr7 (159-211)||(13286871-13286924)
chr7 (180-209)||(21298015-21298044)
chr7 (112-145)||(25776462-25776495)
chr7 (178-211)||(31186667-31186700)
chr7 (156-197)||(33767392-33767433)
chr7 (178-214)||(38192958-38192995)
chr7 (164-209)||(44568849-44568894)
chr7 (178-210)||(3307701-3307733)
chr7 (178-210)||(5766638-5766670)
chr7 (112-144)||(8174953-8174985)
chr7 (160-208)||(8336444-8336492)
chr7 (161-193)||(11058178-11058210)
chr7 (178-213)||(24555701-24555737)
chr7 (156-214)||(31430940-31431000)
chr7 (159-210)||(45865657-45865709)
[»] chr4 (81 HSPs)
chr4 (112-223)||(50881380-50881492)
chr4 (159-213)||(54554380-54554434)
chr4 (112-213)||(20962191-20962294)
chr4 (112-212)||(29248240-29248342)
chr4 (112-211)||(34739887-34739989)
chr4 (163-213)||(43860923-43860973)
chr4 (159-210)||(12566944-12566996)
chr4 (112-207)||(34741350-34741448)
chr4 (112-210)||(20963656-20963757)
chr4 (159-210)||(34027200-34027251)
chr4 (159-210)||(54555357-54555408)
chr4 (113-209)||(21994328-21994424)
chr4 (159-212)||(29249715-29249769)
chr4 (156-213)||(21780119-21780176)
chr4 (158-210)||(550673-550725)
chr4 (178-218)||(20125443-20125483)
chr4 (163-214)||(51754210-51754261)
chr4 (162-211)||(11861902-11861951)
chr4 (162-211)||(50879908-50879957)
chr4 (159-208)||(51164026-51164075)
chr4 (159-211)||(55500411-55500464)
chr4 (164-208)||(12352470-12352514)
chr4 (158-210)||(15694459-15694511)
chr4 (164-212)||(24215752-24215800)
chr4 (156-211)||(34025913-34025969)
chr4 (164-220)||(38656066-38656122)
chr4 (159-207)||(51752686-51752734)
chr4 (164-211)||(11563528-11563575)
chr4 (159-210)||(24701207-24701258)
chr4 (164-211)||(41331768-41331815)
chr4 (159-214)||(48029411-48029465)
chr4 (159-210)||(50138488-50138539)
chr4 (162-212)||(14183609-14183659)
chr4 (164-213)||(22272927-22272976)
chr4 (178-211)||(37273420-37273453)
chr4 (112-214)||(49629631-49629733)
chr4 (159-211)||(11862032-11862084)
chr4 (159-207)||(20612969-20613017)
chr4 (164-212)||(35539602-35539650)
chr4 (156-212)||(36405856-36405912)
chr4 (163-211)||(40479526-40479574)
chr4 (159-214)||(51162073-51162129)
chr4 (112-144)||(51752751-51752783)
chr4 (112-197)||(52264458-52264544)
chr4 (159-214)||(9136410-9136465)
chr4 (164-211)||(50727589-50727636)
chr4 (164-211)||(50735603-50735650)
chr4 (156-220)||(7535429-7535495)
chr4 (178-212)||(16493516-16493550)
chr4 (159-209)||(17289982-17290032)
chr4 (178-208)||(27579516-27579546)
chr4 (159-211)||(15695184-15695237)
chr4 (159-211)||(17289741-17289794)
chr4 (159-211)||(17695978-17696031)
chr4 (156-212)||(18320698-18320755)
chr4 (159-211)||(21246475-21246528)
chr4 (159-211)||(21798331-21798384)
chr4 (164-213)||(35370399-35370448)
chr4 (178-211)||(35539805-35539838)
chr4 (112-145)||(43537518-43537551)
chr4 (112-145)||(46426168-46426201)
chr4 (116-145)||(49630558-49630587)
chr4 (116-145)||(55499318-55499347)
chr4 (169-212)||(145210-145254)
chr4 (163-207)||(937660-937704)
chr4 (161-213)||(7514579-7514631)
chr4 (179-211)||(9001443-9001475)
chr4 (163-210)||(9410292-9410340)
chr4 (112-144)||(12566895-12566927)
chr4 (164-212)||(13128436-13128484)
chr4 (159-210)||(21780361-21780413)
chr4 (178-210)||(21798590-21798622)
chr4 (159-199)||(31110489-31110529)
chr4 (112-140)||(40479473-40479501)
chr4 (162-198)||(44198610-44198646)
chr4 (178-210)||(46094265-46094297)
chr4 (156-212)||(46360896-46360952)
chr4 (175-207)||(47621976-47622008)
chr4 (180-212)||(51396157-51396189)
chr4 (178-210)||(51965372-51965404)
chr4 (159-210)||(54354196-54354248)
[»] chr8 (74 HSPs)
chr8 (112-209)||(27164615-27164714)
chr8 (112-213)||(27163113-27163217)
chr8 (112-210)||(42348961-42349061)
chr8 (112-211)||(39810043-39810145)
chr8 (159-210)||(1600077-1600128)
chr8 (159-210)||(2270297-2270348)
chr8 (159-210)||(39808649-39808699)
chr8 (112-213)||(42350134-42350238)
chr8 (159-211)||(31985010-31985063)
chr8 (159-212)||(40702016-40702069)
chr8 (159-211)||(39513866-39513918)
chr8 (157-211)||(28575115-28575170)
chr8 (156-214)||(27987293-27987351)
chr8 (156-214)||(28044595-28044653)
chr8 (156-214)||(28561430-28561488)
chr8 (156-214)||(28566928-28566986)
chr8 (159-209)||(34901503-34901553)
chr8 (112-211)||(1601210-1601312)
chr8 (159-211)||(1601672-1601725)
chr8 (156-212)||(3912483-3912539)
chr8 (178-214)||(25277731-25277767)
chr8 (160-210)||(2269042-2269093)
chr8 (156-211)||(5873686-5873741)
chr8 (164-211)||(14329611-14329658)
chr8 (156-214)||(27543407-27543466)
chr8 (164-211)||(34985333-34985380)
chr8 (165-220)||(39515134-39515189)
chr8 (164-218)||(4105291-4105344)
chr8 (178-212)||(29309563-29309597)
chr8 (159-210)||(31986234-31986287)
chr8 (178-211)||(12330332-12330365)
chr8 (164-213)||(27198141-27198190)
chr8 (112-145)||(39913891-39913924)
chr8 (178-210)||(960522-960554)
chr8 (156-212)||(21692608-21692664)
chr8 (178-214)||(25601972-25602008)
chr8 (178-210)||(27543650-27543682)
chr8 (179-211)||(27987552-27987584)
chr8 (179-211)||(28044854-28044886)
chr8 (159-211)||(37402483-37402535)
chr8 (180-212)||(43400669-43400701)
chr8 (159-214)||(25653700-25653755)
chr8 (178-213)||(29309799-29309834)
chr8 (156-211)||(30222090-30222145)
chr8 (164-211)||(35862747-35862794)
chr8 (158-209)||(40411404-40411455)
chr8 (159-210)||(43945169-43945220)
chr8 (165-211)||(35009956-35010002)
chr8 (178-208)||(40652621-40652651)
chr8 (156-209)||(40701347-40701401)
chr8 (164-218)||(40770523-40770576)
chr8 (112-145)||(1602855-1602888)
chr8 (180-213)||(4482042-4482075)
chr8 (178-207)||(8388117-8388146)
chr8 (112-145)||(9768261-9768294)
chr8 (159-216)||(19157924-19157981)
chr8 (112-145)||(28561976-28562009)
chr8 (158-211)||(28562024-28562077)
chr8 (112-145)||(28567474-28567507)
chr8 (158-211)||(28567522-28567575)
chr8 (158-210)||(34504182-34504232)
chr8 (112-145)||(39808715-39808748)
chr8 (159-212)||(40652660-40652712)
chr8 (159-212)||(41708826-41708879)
chr8 (112-144)||(1600143-1600175)
chr8 (164-207)||(5703055-5703099)
chr8 (159-210)||(6819195-6819247)
chr8 (180-212)||(6952929-6952961)
chr8 (178-210)||(9513828-9513860)
chr8 (180-212)||(12330590-12330622)
chr8 (156-214)||(16434549-16434609)
chr8 (179-214)||(24971203-24971239)
chr8 (159-211)||(31343608-31343660)
chr8 (365-421)||(37618809-37618865)
[»] chr1 (102 HSPs)
chr1 (112-213)||(14625367-14625470)
chr1 (112-211)||(43635834-43635933)
chr1 (112-214)||(14626735-14626840)
chr1 (161-212)||(26097035-26097086)
chr1 (112-207)||(5560876-5560972)
chr1 (159-208)||(1825296-1825345)
chr1 (158-211)||(32131908-32131961)
chr1 (159-211)||(8928814-8928866)
chr1 (112-211)||(9442946-9443048)
chr1 (161-213)||(13903379-13903431)
chr1 (112-211)||(23322566-23322668)
chr1 (159-211)||(26095813-26095865)
chr1 (112-208)||(2273503-2273600)
chr1 (159-214)||(13902061-13902116)
chr1 (112-213)||(9441564-9441668)
chr1 (158-212)||(14978714-14978768)
chr1 (156-214)||(35979587-35979645)
chr1 (160-210)||(51470129-51470179)
chr1 (156-213)||(38742384-38742441)
chr1 (159-211)||(16785721-16785773)
chr1 (156-207)||(15336378-15336429)
chr1 (160-210)||(52083580-52083631)
chr1 (159-216)||(23321257-23321315)
chr1 (159-211)||(33667638-33667691)
chr1 (159-207)||(40247386-40247435)
chr1 (178-215)||(47022094-47022131)
chr1 (112-210)||(52084782-52084884)
chr1 (156-220)||(6225369-6225433)
chr1 (158-214)||(14978307-14978362)
chr1 (158-210)||(33645014-33645066)
chr1 (162-209)||(47146377-47146425)
chr1 (164-212)||(47221949-47221997)
chr1 (159-217)||(16699110-16699169)
chr1 (164-211)||(22591279-22591326)
chr1 (161-212)||(24545455-24545506)
chr1 (156-211)||(24987607-24987662)
chr1 (178-213)||(25235771-25235806)
chr1 (159-210)||(25601924-25601975)
chr1 (164-211)||(44200326-44200373)
chr1 (164-211)||(44311207-44311254)
chr1 (178-216)||(2059451-2059489)
chr1 (164-210)||(10027988-10028034)
chr1 (180-214)||(13545575-13545609)
chr1 (178-212)||(18458827-18458861)
chr1 (164-213)||(50105407-50105457)
chr1 (178-211)||(9439427-9439460)
chr1 (112-210)||(13917228-13917327)
chr1 (158-210)||(20132381-20132434)
chr1 (159-211)||(25600929-25600982)
chr1 (164-213)||(28724322-28724371)
chr1 (164-213)||(30434277-30434326)
chr1 (112-210)||(2274619-2274720)
chr1 (178-214)||(2472609-2472645)
chr1 (164-212)||(4646755-4646803)
chr1 (112-213)||(8930304-8930406)
chr1 (164-208)||(21853418-21853462)
chr1 (112-144)||(23321332-23321364)
chr1 (164-211)||(32130643-32130691)
chr1 (156-212)||(33936081-33936136)
chr1 (158-210)||(46136086-46136138)
chr1 (164-211)||(2472389-2472436)
chr1 (159-210)||(7112494-7112545)
chr1 (161-209)||(27548964-27549014)
chr1 (164-210)||(31648075-31648122)
chr1 (113-212)||(33934635-33934736)
chr1 (164-211)||(35168019-35168066)
chr1 (159-210)||(44312136-44312187)
chr1 (159-210)||(49201391-49201442)
chr1 (158-209)||(50104540-50104591)
chr1 (159-213)||(7780227-7780280)
chr1 (179-213)||(16698866-16698900)
chr1 (180-210)||(30659435-30659465)
chr1 (159-213)||(37194495-37194549)
chr1 (156-210)||(42736824-42736878)
chr1 (159-212)||(44754608-44754662)
chr1 (182-212)||(44826340-44826370)
chr1 (159-211)||(1826440-1826493)
chr1 (112-145)||(6077007-6077040)
chr1 (180-209)||(7112748-7112777)
chr1 (112-145)||(8928883-8928916)
chr1 (164-212)||(13916090-13916139)
chr1 (112-145)||(13916158-13916191)
chr1 (164-216)||(15790483-15790536)
chr1 (178-211)||(22604687-22604720)
chr1 (178-211)||(28410913-28410946)
chr1 (164-197)||(29075573-29075606)
chr1 (112-145)||(30536434-30536467)
chr1 (156-197)||(34933337-34933378)
chr1 (159-211)||(36343153-36343206)
chr1 (112-145)||(37194446-37194479)
chr1 (158-207)||(49200795-49200844)
chr1 (159-188)||(51903484-51903513)
chr1 (178-210)||(5348163-5348195)
chr1 (178-214)||(13509157-13509193)
chr1 (180-220)||(24004075-24004115)
chr1 (159-214)||(24730209-24730265)
chr1 (165-209)||(27523799-27523843)
chr1 (180-212)||(28724557-28724589)
chr1 (178-210)||(35034320-35034352)
chr1 (156-212)||(39160432-39160488)
chr1 (178-210)||(50596183-50596215)
chr1 (156-212)||(52413119-52413175)
[»] chr6 (58 HSPs)
chr6 (112-212)||(12322760-12322862)
chr6 (158-212)||(3063488-3063542)
chr6 (112-211)||(56069-56170)
chr6 (159-210)||(14328652-14328703)
chr6 (159-210)||(14421662-14421713)
chr6 (112-210)||(22058235-22058336)
chr6 (159-212)||(24235636-24235690)
chr6 (112-212)||(24234327-24234430)
chr6 (112-210)||(22056482-22056583)
chr6 (112-211)||(34762181-34762282)
chr6 (112-212)||(12321560-12321663)
chr6 (160-220)||(33483686-33483747)
chr6 (156-212)||(29942446-29942502)
chr6 (156-211)||(6000674-6000729)
chr6 (159-209)||(14327370-14327420)
chr6 (159-209)||(14420380-14420430)
chr6 (165-214)||(16129490-16129539)
chr6 (159-216)||(31851752-31851809)
chr6 (158-210)||(10344050-10344102)
chr6 (164-212)||(22366229-22366277)
chr6 (156-211)||(3120337-3120392)
chr6 (163-210)||(23270219-23270266)
chr6 (164-211)||(26644700-26644747)
chr6 (164-211)||(26750666-26750713)
chr6 (158-212)||(32614546-32614601)
chr6 (164-210)||(7922317-7922363)
chr6 (164-210)||(13114398-13114444)
chr6 (158-211)||(5999716-5999769)
chr6 (158-211)||(22573801-22573854)
chr6 (179-212)||(22574056-22574089)
chr6 (112-145)||(24914506-24914539)
chr6 (158-216)||(29454717-29454779)
chr6 (164-212)||(24062165-24062213)
chr6 (178-210)||(24387786-24387818)
chr6 (159-211)||(30409675-30409727)
chr6 (163-210)||(54807-54853)
chr6 (160-206)||(3062194-3062241)
chr6 (156-211)||(22365833-22365888)
chr6 (156-210)||(28583547-28583602)
chr6 (156-210)||(3593575-3593629)
chr6 (164-214)||(11425779-11425829)
chr6 (159-212)||(18984010-18984064)
chr6 (159-208)||(24914440-24914490)
chr6 (365-419)||(28647164-28647218)
chr6 (156-209)||(31851995-31852049)
chr6 (180-214)||(31886055-31886089)
chr6 (159-193)||(33485081-33485115)
chr6 (156-213)||(33751925-33751983)
chr6 (181-214)||(18246143-18246176)
chr6 (116-144)||(54874-54902)
chr6 (112-144)||(6759073-6759105)
chr6 (180-208)||(13114652-13114680)
chr6 (156-204)||(13357590-13357638)
chr6 (178-210)||(13639509-13639541)
chr6 (164-212)||(17441400-17441447)
chr6 (178-214)||(22362962-22362998)
chr6 (368-408)||(28647088-28647128)
chr6 (171-211)||(32614171-32614211)
[»] scaffold0250 (3 HSPs)
scaffold0250 (159-214)||(10076-10131)
scaffold0250 (112-145)||(11525-11558)
scaffold0250 (112-144)||(10148-10180)
[»] scaffold0804 (1 HSPs)
scaffold0804 (161-214)||(2729-2783)
[»] scaffold0725 (2 HSPs)
scaffold0725 (159-212)||(3912-3965)
scaffold0725 (159-212)||(4962-5017)
[»] scaffold0176 (1 HSPs)
scaffold0176 (159-211)||(293-346)
[»] scaffold0228 (3 HSPs)
scaffold0228 (156-211)||(8081-8137)
scaffold0228 (156-211)||(15663-15719)
scaffold0228 (156-211)||(25615-25671)
[»] scaffold0210 (2 HSPs)
scaffold0210 (112-211)||(4706-4808)
scaffold0210 (158-210)||(5900-5953)
[»] scaffold0040 (3 HSPs)
scaffold0040 (112-210)||(64503-64603)
scaffold0040 (159-211)||(66049-66102)
scaffold0040 (112-144)||(65999-66031)
[»] scaffold0014 (2 HSPs)
scaffold0014 (159-211)||(227368-227421)
scaffold0014 (159-210)||(228592-228645)
[»] scaffold0136 (3 HSPs)
scaffold0136 (159-211)||(35598-35650)
scaffold0136 (159-211)||(642-694)
scaffold0136 (164-213)||(36754-36803)
[»] scaffold0032 (1 HSPs)
scaffold0032 (156-214)||(91046-91104)
[»] scaffold0010 (1 HSPs)
scaffold0010 (158-210)||(26308-26360)
[»] scaffold0450 (2 HSPs)
scaffold0450 (156-211)||(7858-7913)
scaffold0450 (164-211)||(8106-8153)
[»] scaffold0384 (2 HSPs)
scaffold0384 (159-213)||(4246-4300)
scaffold0384 (165-210)||(4439-4484)
[»] scaffold0289 (1 HSPs)
scaffold0289 (164-214)||(9916-9966)
[»] scaffold0079 (1 HSPs)
scaffold0079 (156-213)||(6807-6865)
[»] scaffold0769 (2 HSPs)
scaffold0769 (178-211)||(4176-4209)
scaffold0769 (156-211)||(3913-3969)
[»] scaffold0227 (2 HSPs)
scaffold0227 (112-209)||(23685-23784)
scaffold0227 (159-210)||(24943-24995)
[»] scaffold0246 (4 HSPs)
scaffold0246 (163-211)||(15871-15919)
scaffold0246 (163-211)||(17465-17513)
scaffold0246 (112-140)||(15947-15975)
scaffold0246 (112-140)||(17412-17440)
[»] scaffold0142 (1 HSPs)
scaffold0142 (178-210)||(34851-34883)
[»] scaffold0031 (2 HSPs)
scaffold0031 (178-210)||(1827-1859)
scaffold0031 (164-213)||(2070-2120)
[»] scaffold0933 (1 HSPs)
scaffold0933 (159-210)||(2724-2775)
[»] scaffold0809 (1 HSPs)
scaffold0809 (179-209)||(4023-4053)
[»] scaffold0727 (1 HSPs)
scaffold0727 (159-213)||(1148-1202)
[»] scaffold0129 (2 HSPs)
scaffold0129 (112-145)||(30792-30825)
scaffold0129 (112-144)||(37348-37380)
[»] scaffold0098 (1 HSPs)
scaffold0098 (156-209)||(42945-42998)
[»] scaffold0093 (1 HSPs)
scaffold0093 (112-145)||(9004-9037)
[»] scaffold0039 (1 HSPs)
scaffold0039 (162-213)||(110406-110458)
[»] scaffold0002 (1 HSPs)
scaffold0002 (164-212)||(432393-432441)


Alignment Details
Target: chr3 (Bit Score: 180; Significance: 6e-97; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 211 - 515
Target Start/End: Original strand, 9243993 - 9244304
Alignment:
Q  211 ttttatatatgatctgctacgattttaaattaacggttgagattaacttgcttgaaattgtatgaattcggaccttaggcgattccccaacggaaaccca 310  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||    
T  9243993 ttttatatatgatctgctacgatttcaaattaacgattgagattaacttgcttgaaactgtatgaattcggactttaggagatcccccaacggaaaccca 9244092  T
Q  311 aacatgagtagcatttggatgacatagaattggtgacgnnnnnnnngaa--gtcatttgtaacattatggttgaccaatatcaccaattctatatcaccc 408  Q
    |||| |||||||||||| |||||||||||||||| |||         ||  |||| |||||| ||| |||||||||||||||||||||||||| ||||||    
T  9244093 aacacgagtagcatttgcatgacatagaattggttacgagaaaaaaaaaaagtcacttgtaatattgtggttgaccaatatcaccaattctatgtcaccc 9244192  T
Q  409 gaatgctaccc-gataaatgttgttgtcaacccgaaaatcatgaatttctcaacaatctgtaac----agcttgtactttctcaactaaatgtccattat 503  Q
     | |||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||    
T  9244193 aattgctaccccgataaatgttgttgtcaacaagaaaatcatgaatttctcaacaatctgtaactaacagcttgtactttctcaactaaatgtccattat 9244292  T
Q  504 gaaagcaatatt 515  Q
    ||||||||||||    
T  9244293 gaaagcaatatt 9244304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 46597465 - 46597566
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagg-ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46597465 gaagaatcttcattttacaaggacggaatctaaattgatttttttacaggaggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 46597564  T
Q  210 ct 211  Q
    ||    
T  46597565 ct 46597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 46610109 - 46610009
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46610109 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 46610010  T
Q  210 c 210  Q
    |    
T  46610009 c 46610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 10615375 - 10615276
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10615375 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 10615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 15086323 - 15086219
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  15086323 gaagaatcttcattttacaaggacggaatctaaatatttttttttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 15086224  T
Q  209 ccttt 213  Q
    |||||    
T  15086223 ccttt 15086219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 37977512 - 37977566
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37977512 ggggcaaaaccaaaagtgtcctatattacagggggtaaagacctattaacccttt 37977566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 54567749 - 54567800
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54567749 ggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 54567800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 10616779 - 10616833
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10616779 ggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 10616833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 18142203 - 18142256
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  18142203 ggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccctt 18142256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 48044325 - 48044276
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48044325 ggggcaaaaccaaaagtgccctatatcacagggggtaaagacctattaac 48044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 18140988 - 18140938
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  18140988 gcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccctt 18140938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 22256303 - 22256197
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||| | |||||||||| ||||||||||| |||||||    
T  22256303 gaagaatcttcattttacaaggacggaatctaaaaaaatagttttacagggggcaaaaccaaaagtgtcatatattacaggggggtaaagacttattaac 22256204  T
Q  209 cctttta 215  Q
    |||||||    
T  22256203 cctttta 22256197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 28208102 - 28208203
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acaggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaacc 209  Q
    |||||||||| |||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||    
T  28208102 gaagaatctttattttacaaggacggaatctaaaaaaaaaaaattacagggggaaaaccaaaagtgccctatattacaggggggtaaagctctattaacc 28208201  T
Q  210 ct 211  Q
    ||    
T  28208202 ct 28208203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 11359509 - 11359455
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||| ||||||||||||| |||||||| |||||||||||| |||||||||||||    
T  11359509 agggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccctt 11359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 45291472 - 45291418
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||| ||||||||||||||||||| | | |||||||||||    
T  45291472 aggggcaaaaccaaaagtgacctatattacagggggtaagggcatattaaccctt 45291418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 7248916 - 7248863
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||| ||  |||||||||||||||||||| |||||||||||||    
T  7248916 ggggcaaaaccaaaaatgatctatattacagggggtaaaggcctattaaccctt 7248863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 22257337 - 22257390
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccc 210  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||    
T  22257337 aggggcaaaacaaaaagtgccctataatacaggggggtaaagacctattaaccc 22257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 28207034 - 28206981
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccct 211  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  28207034 gggggaaaaccaaaagtgccctatattacaggagggtaaagccctattaaccct 28206981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 29184989 - 29185038
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||| |||||||||||||| |||||| |||||||||||    
T  29184989 ggcaaaaccaaaagtgacctatattacagggagtaaaggcctattaaccc 29185038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 31835847 - 31835900
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||| |||||||| | ||||||||||||||||||||| |||||||||||    
T  31835847 ggggcaaaatcaaaagtgtcatatattacagggggtaaagacatattaaccctt 31835900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 2305506 - 2305566
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttat 216  Q
    ||||||| ||||||||||||| |||||||| |||||||||||| | |||||||||| ||||    
T  2305506 acagggggaaaaccaaaagtgacctatattgcagggggtaaaggcttattaaccctattat 2305566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 12210080 - 12210028
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||| ||||||||||||||||||||   ||||||||||    
T  12210080 aggggcaaaaccaaaagtgacctatattacagggggtaaaagtctattaaccc 12210028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 24910934 - 24910986
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    |||| ||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  24910934 acagtggcaaaaccaaaagtgatctatattacagggggtaaagatctattaac 24910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 38343235 - 38343179
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttta 215  Q
    ||||||||| |||||||| | ||||||||||| ||||||| ||||||||||||||||    
T  38343235 ggggcaaaatcaaaagtgacatatattacaggaggtaaaggcctattaaccctttta 38343179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 46596142 - 46596094
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  46596142 caaaaccaaaagtaccctatattacagggggtaaagctctattaaccct 46596094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 51460774 - 51460822
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||| |||| || |||||||||||||||||||||||||||||||||||    
T  51460774 aaaacaaaaaatgacctatattacagggggtaaagacctattaaccctt 51460822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 3190585 - 3190670
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattacagggggtaaa 197  Q
    |||||||||| ||||||||||| |||||||||||          |||||  |||||||||||||| ||||||||||||||||||||    
T  3190585 gaagaatctttattttacaagggcggaatctaaaaaaaaaaattacaggtccaaaaccaaaagtggcctatattacagggggtaaa 3190670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 3207510 - 3207595
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattacagggggtaaa 197  Q
    |||||||||| ||||||||||| | |||||||||          |||||| |||||||||||||| ||||||||||||||||||||    
T  3207510 gaagaatctttattttacaagggcagaatctaaaaaaaaaatttacagggccaaaaccaaaagtggcctatattacagggggtaaa 3207595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 4218872 - 4218923
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatatta-cagggggtaaagacctattaacc 209  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  4218872 ggggcaaaaccaaaagtgacctatattaccagggggtaaaggcctattaacc 4218923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 12066279 - 12066228
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||| |||||||| |||||||||||||||||||| | |||||||||||    
T  12066279 gggcaaaatcaaaagtgacctatattacagggggtaaaaaactattaaccct 12066228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 49872952 - 49873007
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||  || || ||||||||||||||||||||||||||||||||||    
T  49872952 acagggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccct 49873007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 47115573 - 47115619
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||    
T  47115573 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 47115619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 49265294 - 49265352
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||| ||||||||||||| |||||||||||| | |||||  |||||||||||||||    
T  49265294 acagggggaaaaccaaaagtgacctatattacagagagtaaatgcctattaaccctttt 49265352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 6510247 - 6510214
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  6510247 cctatattacagggggtaaagacctattaaccct 6510214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 10616728 - 10616761
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||||||    
T  10616728 gaagaatcttcattttacaaggacggaatctaaa 10616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 20957195 - 20957228
Alignment:
Q  179 ctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||||||||||||||||    
T  20957195 ctatattacagggggtaaagacctattaaccctt 20957228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 27497829 - 27497796
Alignment:
Q  180 tatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  27497829 tatattacagggggtaaagacctattaacccttt 27497796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 27760335 - 27760286
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||| || || ||||||||||||||||||||||| ||||||||||||    
T  27760335 aaaaccagaaatgacctatattacagggggtaaagacttattaacccttt 27760286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 29183781 - 29183732
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||||||    
T  29183781 ggcaaaatcaaaagtgacctatattataggggataaagacctattaaccc 29183732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 38843555 - 38843608
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattac-agggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||| ||||||    
T  38843555 ggggcaaaaccaaaagtgtcctatattacaaaggggtaaagacctatcaaccct 38843608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 52396454 - 52396499
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||    
T  52396454 aaaaccagaagtgctctatattacagggggtaaagccctattaacc 52396499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 15093720 - 15093772
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||| ||||||| |||||||||| |||||||||||  |||||||||||    
T  15093720 ggggcaaaatcaaaagtaccctatattatagggggtaaagttctattaaccct 15093772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 17261071 - 17261019
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttat 216  Q
    |||||||||| || |||||||||||||||||||||  | ||||||||||||||    
T  17261071 aaaaccaaaaatgacctatattacagggggtaaagcaccattaacccttttat 17261019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 25110072 - 25110120
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  25110072 aaaaccgaaaatgacctatattacagggtgtaaagacctattaaccctt 25110120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 31173591 - 31173638
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||    
T  31173591 ggggcaaaaccaaaagtgatctatattaca-ggggtaaagacctattaa 31173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 49263075 - 49263027
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||| ||||||||  |||||||| |||||||||||||||||||||||||    
T  49263075 aaaatcaaaagtgatctatattatagggggtaaagacctattaaccctt 49263027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 49880762 - 49880794
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  49880762 cctatattacagggggtaaagacctattaaccc 49880794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 51252290 - 51252346
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccctttt 214  Q
    |||| ||||||| || || |||||||||||||||| |||||||||||||||||||||    
T  51252290 gggggaaaaccagaaatgacctatattacagggggataaagacctattaaccctttt 51252346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 4217726 - 4217679
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    |||||||| |||||||  ||||||||||||||||||||| ||||||||    
T  4217726 gggcaaaatcaaaagttacctatattacagggggtaaaggcctattaa 4217679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 419
Target Start/End: Original strand, 7975927 - 7975978
Alignment:
Q  368 taacattatggttgaccaatatcaccaattctatatcacccgaatgctaccc 419  Q
    ||||||| |||||||||||| ||||||||||||| |||| | ||||||||||    
T  7975927 taacattgtggttgaccaatgtcaccaattctatgtcactcaaatgctaccc 7975978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 8355569 - 8355624
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccc 210  Q
    ||||||| ||||||| || || ||||||||||| ||||||||||||||||||||||    
T  8355569 acagggggaaaaccagaaatgacctatattacaggggggtaaagacctattaaccc 8355624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 24729638 - 24729689
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccct 211  Q
    |||||||||||||||  ||||||||||||||| |||||| ||||||||||||    
T  24729638 ggcaaaaccaaaagtaacctatattacaggggagtaaaggcctattaaccct 24729689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 24909429 - 24909378
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||| |  ||||||||||||||||||||  |||||||||||||    
T  24909429 ggcaaaaccaaaatttacctatattacagggggtaaatgcctattaaccctt 24909378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 31172346 - 31172299
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||| || ||||||||||||| ||||||| |||||||||||    
T  31172346 caaaaccaaaaatgacctatattacaggtggtaaaggcctattaaccc 31172299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 37976021 - 37975962
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaacccttttata 217  Q
    ||||||||||||||||| ||||||||||||| ||||||||   |||||||||||| ||||    
T  37976021 ggggcaaaaccaaaagtaccctatattacaggggggtaaaactctattaacccttatata 37975962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 39846583 - 39846638
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| |||||||||| || |||||||||||||||||||||  | |||||||||    
T  39846583 acaggggaaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 39846638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 14241246 - 14241212
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||||||||| |||||||    
T  14241246 cctatattacagggggtaaagacctataaaccctt 14241212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 18705005 - 18704951
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattac-agggggtaaagacctattaaccctt 212  Q
    |||| ||||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  18705005 gggggaaaaccaaaagtgccctatattactggggggtaaagctctattaaccctt 18704951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 22949278 - 22949248
Alignment:
Q  178 cctatattacagggggtaaagacctattaac 208  Q
    |||||||||||||||||||||||||||||||    
T  22949278 cctatattacagggggtaaagacctattaac 22949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 41749432 - 41749386
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| |||||||| ||||||||||| ||||||||| |||||||||||    
T  41749432 aaaatcaaaagtgacctatattacaaggggtaaaggcctattaaccc 41749386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 53806821 - 53806855
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||| |||||||||||||||||||||||    
T  53806821 cctatattacaaggggtaaagacctattaaccctt 53806855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 4700008 - 4699971
Alignment:
Q  178 cctatattacaggg-ggtaaagacctattaaccctttt 214  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4700008 cctatattacagggaggtaaagacctattaaccctttt 4699971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 207
Target Start/End: Original strand, 8827450 - 8827479
Alignment:
Q  178 cctatattacagggggtaaagacctattaa 207  Q
    ||||||||||||||||||||||||||||||    
T  8827450 cctatattacagggggtaaagacctattaa 8827479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 9322149 - 9322108
Alignment:
Q  180 tatattacagggggtaaagacctattaacccttttatatatg 221  Q
    |||||||||||| ||||||||||||||||||| ||| |||||    
T  9322149 tatattacagggagtaaagacctattaaccctattaaatatg 9322108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 12072871 - 12072908
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacagggggtaaa 197  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  12072871 gggcaaaaccaaaagtgacctatattacggggggtaaa 12072908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 14824851 - 14824818
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  14824851 gaagaatctttattttacaaggacggaatctaaa 14824818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 14826032 - 14826065
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  14826032 gaagaatctttattttacaaggacggaatctaaa 14826065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 19111260 - 19111297
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacaggggg 193  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  19111260 acaggggtaaaaccaaaagtgacctatattacaggggg 19111297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 19624021 - 19624070
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||| ||| || |||||||||||| || ||||||||||||||||||||    
T  19624021 aaaaccgaaaatgacctatattacagaggataaagacctattaacccttt 19624070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 29313834 - 29313789
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||| ||| || ||||||||||||| ||||||||||||||||||    
T  29313834 aaaaccgaaaatgacctatattacaggaggtaaagacctattaacc 29313789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 43112077 - 43112024
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||| |||||||||||||   ||||||||||| ||||||| |||||||||||||    
T  43112077 ggggtaaaaccaaaagtgatttatattacaggaggtaaaggcctattaaccctt 43112024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 43113050 - 43113087
Alignment:
Q  166 aaccaaaagtgccctatattacagggggtaaagaccta 203  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  43113050 aaccaaaagtgacctatattacagggggtaaaggccta 43113087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 45334036 - 45334093
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatatg 221  Q
    |||||||||| || |||||||||||||||||||||| | |||||| | ||||| ||||    
T  45334036 aaaaccaaaaatgacctatattacagggggtaaagaaccattaactcatttatttatg 45334093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 51549581 - 51549614
Alignment:
Q  179 ctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||| |||||||||||||||||||    
T  51549581 ctatattacaggggataaagacctattaaccctt 51549614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 54566558 - 54566510
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  54566558 caaaaccaaaagtgacctatattaca-ggggtaaaggtctattaaccctt 54566510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 7584281 - 7584249
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||| |||||||||||||||||||||||    
T  7584281 tatattacaaggggtaaagacctattaaccctt 7584249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 11360353 - 11360405
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccc 210  Q
    |||| ||||||||||||| |||||||| || |||||||||| |||||||||||    
T  11360353 gggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 11360405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 145
Target Start/End: Complemental strand, 12071614 - 12071582
Alignment:
Q  113 aagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||| |||||||||||||||||||||||    
T  12071614 aagaatctttattttacaaggacggaatctaaa 12071582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 14824802 - 14824750
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccc 210  Q
    ||||||||| |||||||| ||||||||||||||| ||||||  ||||||||||    
T  14824802 ggggcaaaatcaaaagtgacctatattacaggggcgtaaagcactattaaccc 14824750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 14826081 - 14826133
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| |  |||||||||||||||||   |||||||||||    
T  14826081 ggggcaaaaccaaaagtgacaaatattacagggggtaaaacactattaaccct 14826133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 23539315 - 23539260
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag--ggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||   ||||||||||  ||||||||| |||||||||||||    
T  23539315 ggggcaaaaccaaaagtggtgtatattacagggggggtaaaggcctattaaccctt 23539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 30271590 - 30271542
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||| |||| || |||||||||||| ||||||||| ||||||||||||    
T  30271590 aaaactaaaaatgacctatattacagagggtaaagaactattaaccctt 30271542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 34062344 - 34062396
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| ||||||||||||| ||||||||||||||| |||||  | |||||||||    
T  34062344 ggggaaaaaccaaaagtgacctatattacaggggataaaggtcaattaaccct 34062396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 35434083 - 35434131
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| || |||||||||||||||||||||  | ||||||||||    
T  35434083 aaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 35434131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 37977466 - 37977498
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    ||||| |||||||||||||||||||||||||||    
T  37977466 gaagattcttcattttacaaggacggaatctaa 37977498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 47117579 - 47117615
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  47117579 cctatattacaaggggtaaagacctattaactctttt 47117615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 49116864 - 49116900
Alignment:
Q  183 attacagggggtaaagacctattaacccttttatata 219  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  49116864 attacagggggtaaagacatattaacccttttgtata 49116900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 51252081 - 51252049
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||| ||||||||||||||||||    
T  51252081 cctatattacagggagtaaagacctattaaccc 51252049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 54012599 - 54012647
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| || |||||||||||||||||||||  | ||||||||||    
T  54012599 aaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 54012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 92)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 23834681 - 23834578
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23834681 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaattacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacc 23834582  T
Q  210 cttt 213  Q
    ||||    
T  23834581 cttt 23834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 38937514 - 38937571
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38937514 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctattat 38937571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 16670550 - 16670495
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16670550 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccttttt 16670495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 38815050 - 38815150
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacag-gggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||          |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  38815050 gaagaatcttcattttacaaggacggaatctaaattttttttttacagagggcaaaaccaaaagtgccttatattacaggggagtaaagacctattaacc 38815149  T
Q  210 c 210  Q
    |    
T  38815150 c 38815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 23835778 - 23835831
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23835778 ggggcaaaactaaaagtgccctatattacagggggtaaagacctattaaccctt 23835831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 1903031 - 1902929
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  1903031 gaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 1902932  T
Q  209 cct 211  Q
    |||    
T  1902931 cct 1902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 1904365 - 1904467
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  1904365 gaagaatcttcattttacaaggacggaatctaaaaattttttttcacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 1904464  T
Q  209 cct 211  Q
    |||    
T  1904465 cct 1904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 7576426 - 7576325
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacaggggg-taaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  7576426 gaagaatcttcattttacaaggacggaatctaaaaaaaatattttacagggggcaaaaccaaaagtgccctatattacagggggataaagacctattaac 7576327  T
Q  209 cc 210  Q
    ||    
T  7576326 cc 7576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 18250846 - 18250950
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagg-ggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  18250846 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacaggaggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaac 18250945  T
Q  209 ccttt 213  Q
    |||||    
T  18250946 ccttt 18250950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 19686185 - 19686238
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  19686185 ggggcaaaaccaaaagtgccctatattacagggggtaaagcactattaaccctt 19686238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 7577782 - 7577837
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaacccttt 213  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7577782 ggggtaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccttt 7577837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 18249731 - 18249630
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaacc 209  Q
    |||||||||||||||||||||||| |||||||||          ||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18249731 gaagaatcttcattttacaaggacagaatctaaaaaaaaaatttacaggagacaaaaccaaaagtgccatatattacaagggggtaaagacctattaacc 18249632  T
Q  210 ct 211  Q
    ||    
T  18249631 ct 18249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 44366968 - 44366867
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacaggg-ggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  44366968 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaac 44366869  T
Q  209 cc 210  Q
    ||    
T  44366868 cc 44366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 38936044 - 38935945
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acag-gggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  38936044 gaagaatcttcattttacaaggacggaatctaaatttttttttttacagtgggcaaaaccaaaagtgtcctatattaca-ggggtaaagacctattaacc 38935946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 5970713 - 5970810
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||| ||||||||||||          ||||   ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  5970713 gaagaatcttcattttacaagaacggaatctaaatttcttttttacagaaacaaaaccaaaagtaccctatattaca-ggggtaaagacctattaaccc 5970810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 22116209 - 22116154
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||    
T  22116209 acagggggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccct 22116154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 38877032 - 38877079
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  38877032 aaaaccaaaagtgccttatattacagggggtaaagccctattaaccct 38877079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 28141734 - 28141684
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||||||    
T  28141734 aaaaccaaaagtgacctatattacagggggtaaagatctattaatcctttt 28141684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 15747798 - 15747749
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  15747798 caaaaccaaaagtgacctatattacagggggtaaaggtctattaaccctt 15747749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 22468230 - 22468283
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  22468230 ggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22468283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 22474451 - 22474504
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  22474451 ggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22474504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 18701597 - 18701541
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatat 220  Q
    |||||||||| || ||||||||||||||| ||||||||||||||||  |||||||||    
T  18701597 aaaaccaaaaatgacctatattacaggggataaagacctattaacctatttatatat 18701541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 30371436 - 30371384
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| |||||||||| || |||||||||||||| |||||||||||||||||||    
T  30371436 gggggaaaaccaaaaatgacctatattacagggagtaaagacctattaaccct 30371384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 3364566 - 3364621
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||| |||||| ||| || | ||||||||||||||||||||||||||||||||||    
T  3364566 aggggaaaaaccgaaaatgacttatattacagggggtaaagacctattaacccttt 3364621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 19493459 - 19493506
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||    
T  19493459 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccct 19493506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 22467029 - 22466982
Alignment:
Q  163 caaaaccaaaagtgccctatattacag-ggggtaaagacctattaacc 209  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  22467029 caaaaccaaaagtgacctatattacaggggggtaaagacctattaacc 22466982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 28462502 - 28462553
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccctt 212  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  28462502 gcaaaaccaaaagtgacctatattacagggggataaaggcctattaaccctt 28462553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 39150280 - 39150225
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||| | ||||||||||||||||||| |  |||||||||||    
T  39150280 acaggggcaaaaccaaaagagtcctatattacagggggtaatgcactattaaccct 39150225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 41305930 - 41305880
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  41305930 gggcagaaccaaaagcgccctatattaca-ggggtaaagacctattaaccct 41305880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 44242361 - 44242412
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||  |||||||||||| ||||||| |||||||||||    
T  44242361 ggggcaaaaccaaaagtgatctatattacaggaggtaaaggcctattaaccc 44242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 5969774 - 5969720
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttta 215  Q
    ||||||||||||||| |||||||||||||||| |||||  |||||||||| ||||    
T  5969774 ggcaaaaccaaaagtaccctatattacaggggataaagctctattaacccattta 5969720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 12028252 - 12028198
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| |||| ||||| || |||||||||||||| ||||||||||||||||||    
T  12028252 acaggggaaaaatcaaaaatgacctatattacagggtgtaaagacctattaaccc 12028198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 17328124 - 17328090
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||||||    
T  17328124 cctatattacagggggtaaagacctattaaccctt 17328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 21903975 - 21903921
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccctt 212  Q
    |||| ||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  21903975 gggggaaaaccaaaagtgccctatattacaggggtgtaaagccccattaaccctt 21903921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 22535500 - 22535450
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||| ||| || ||||||||| |||||||||||||||||||||||||||    
T  22535500 aaaaccgaaaatgacctatattaaagggggtaaagacctattaaccctttt 22535450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 85494 - 85437
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctt 212  Q
    ||||||| |||||| ||| || ||||||||||| ||||||||||||||||||||||||    
T  85494 acaggggaaaaaccgaaaatgacctatattacaagggggtaaagacctattaaccctt 85437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 15749014 - 15749067
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||| | ||||||||||||| ||||  |||||||||||||    
T  15749014 ggggcaaaaccaaaagtgacatatattacaggggataaaagcctattaaccctt 15749067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 16577372 - 16577405
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  16577372 cctatattacagggggtaaagacctattaaccct 16577405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 19052200 - 19052233
Alignment:
Q  180 tatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||||||||||||||||||||||||||    
T  19052200 tatattacagggggtaaagacctattaacccttt 19052233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 22535686 - 22535739
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||| ||||||| || || ||||||||||||| ||||||||||||||||||    
T  22535686 acagggggaaaaccagaaatgacctatattacaggaggtaaagacctattaacc 22535739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 34635738 - 34635705
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  34635738 cctatattacagggggtaaagacctattaaccct 34635705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 37147604 - 37147551
Alignment:
Q  157 caggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||| ||||||  || || |||||||||||||||||||||||||||||||||    
T  37147604 cagggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccc 37147551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 44241144 - 44241095
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||| || |||||||||||||| |||||| |||||||||||||    
T  44241144 caaaaccaaaaatgacctatattacagggagtaaagtcctattaaccctt 44241095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 15809386 - 15809430
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||    
T  15809386 aaaaccaaaagtgacctatattgcaggggataaagacctattaac 15809430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 19641478 - 19641446
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  19641478 cctatattacagggggtaaagacctattaaccc 19641446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 19840071 - 19840039
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  19840071 cctatattacagggggtaaagacctattaaccc 19840039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 23260352 - 23260316
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||| ||||||||||||||||||||||    
T  23260352 cctatattacagggagtaaagacctattaaccctttt 23260316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 29835134 - 29835102
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  29835134 cctatattacagggggtaaagacctattaaccc 29835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 30371607 - 30371651
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    ||||||| || || |||||||||||||||||||||||||||||||    
T  30371607 aaaaccagaaatgacctatattacagggggtaaagacctattaac 30371651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 38385967 - 38385931
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||||||||||||| ||||    
T  38385967 cctatattacagggggtaaagacctattaaccttttt 38385931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 38937030 - 38936998
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||||||||||||    
T  38937030 gaagaatcttcattttacaaggacggaatctaa 38936998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 38937465 - 38937497
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||||||||||||    
T  38937465 gaagaatcttcattttacaaggacggaatctaa 38937497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 43301934 - 43301882
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    ||||||| ||| ||| || || |||||||||||||||||||||||||||||||    
T  43301934 acagggggaaagccagaaatgacctatattacagggggtaaagacctattaac 43301882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 45161389 - 45161440
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||||||||||||||| ||||||||   |||||||||||||    
T  45161389 ggcaaaaccaaaagtgccctatattaca-ggggtaaaacactattaacccttt 45161440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 14793458 - 14793513
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| |||||||||| || |||||||||||||||||||||  | |||||||||    
T  14793458 acagggggaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 14793513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 15481536 - 15481485
Alignment:
Q  164 aaaaccaaaagtgccctatattacaggggg-taaagacctattaaccctttt 214  Q
    ||||||||||||| |||||||| ||||||| ||||| |||||||||||||||    
T  15481536 aaaaccaaaagtgacctatattgcagggggataaaggcctattaaccctttt 15481485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 24952058 - 24952113
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| |||||||||| || |||||||||||||||||||||  | |||||||||    
T  24952058 acagggggaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccct 24952113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 28484603 - 28484646
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    |||||||||| || |||||||||||||| |||||||||||||||    
T  28484603 aaaaccaaaaatgacctatattacagggagtaaagacctattaa 28484646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 209
Target Start/End: Complemental strand, 38210896 - 38210865
Alignment:
Q  178 cctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||    
T  38210896 cctatattacagggggtaaagacctattaacc 38210865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 145
Target Start/End: Original strand, 7577736 - 7577766
Alignment:
Q  115 gaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||||||||||||||||||||||||    
T  7577736 gaatcttcattttacaaggacggaatctaaa 7577766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 17328330 - 17328384
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||| ||||||| || || | |||| ||||||||||||||||||||||||||||    
T  17328330 agggggaaaaccagaaatgacatataatacagggggtaaagacctattaaccctt 17328384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 25927127 - 25927181
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||| ||||||| || || ||||||||||| ||| ||||||||||||||||||||    
T  25927127 ggggaaaaaccagaaatgacctatattacaagggataaagacctattaacccttt 25927181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 28149669 - 28149723
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| ||||||  || || |||||||||||||||||||| ||||||||||||    
T  28149669 acagggggaaaaccggaaatgacctatattacagggggtaaaaacctattaaccc 28149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 29640817 - 29640775
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaag 198  Q
    ||||||| |||||||||| || |||||||||||||||||||||    
T  29640817 acagggggaaaaccaaaaatgacctatattacagggggtaaag 29640775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 33641178 - 33641132
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||| ||| || |||||||||||| ||||||||||||||||||||    
T  33641178 aaaaccgaaaatgacctatattacagagggtaaagacctattaaccc 33641132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 34404601 - 34404651
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||| ||||    
T  34404601 aaaaccaaaagtgacatatattacagggggtaaaagcctattaaccatttt 34404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 38876040 - 38875986
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccctt 212  Q
    |||| ||||||||||||| |||||||||||| ||||||||| |||||||| ||||    
T  38876040 ggggaaaaaccaaaagtgtcctatattacaggggggtaaagccctattaatcctt 38875986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 7327822 - 7327765
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||| ||||| |||| || |||||||||||||||||||||  | |||||||||||    
T  7327822 acagggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaacccttt 7327765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 8238040 - 8237987
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||  |||||||||| ||||||||   ||||||||||||    
T  8238040 ggggcaaaaccaaaagtgttctatattacatggggtaaaacactattaaccctt 8237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 16670599 - 16670566
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||||||||||||| |||||||||||||    
T  16670599 gaagaatcttcattttacaatgacggaatctaaa 16670566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 21904025 - 21903992
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  21904025 gaagaatctttattttacaaggacggaatctaaa 21903992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 23835730 - 23835759
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatc 141  Q
    ||||||||||||||||||||||||||||||    
T  23835730 gaagaatcttcattttacaaggacggaatc 23835759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 25227875 - 25227822
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccct 211  Q
    |||| ||||||| || || ||||||||||||| |||||||||||||||||||||    
T  25227875 gggggaaaaccagaaatgacctatattacaggagggtaaagacctattaaccct 25227822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 34428667 - 34428638
Alignment:
Q  180 tatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||    
T  34428667 tatattacagggggtaaagacctattaacc 34428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 36565336 - 36565303
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  36565336 gaagaatctttattttacaaggacggaatctaaa 36565303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 38813676 - 38813643
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||| ||||||||||||||||||||||||||    
T  38813676 gaagaatattcattttacaaggacggaatctaaa 38813643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 38876090 - 38876057
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  38876090 gaagaatctttattttacaaggacggaatctaaa 38876057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 41305982 - 41305949
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||| |||||||||||||||||||||||||||    
T  41305982 gaagaagcttcattttacaaggacggaatctaaa 41305949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 44368341 - 44368374
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||||||| |||||||||||||||||||    
T  44368341 gaagaatcttcattatacaaggacggaatctaaa 44368374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 145
Target Start/End: Complemental strand, 5969828 - 5969796
Alignment:
Q  113 aagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||| |||||||||||||||||||||||    
T  5969828 aagaatctttattttacaaggacggaatctaaa 5969796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 15808777 - 15808721
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccctttt 214  Q
    |||| ||||||||||||| ||||||||  |||||| |||||||||||||| ||||||    
T  15808777 gggggaaaaccaaaagtgacctatattgtagggggataaagacctattaatcctttt 15808721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 16139119 - 16139175
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| ||||| |||| || ||||||||||||||| |||||  ||||||||||||    
T  16139119 acagggggaaaacaaaaaatgacctatattacaggggataaagcactattaaccctt 16139175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 19299762 - 19299818
Alignment:
Q  156 acaggggc-aaaaccaaaagtgccctatattacagggggtaaagac-ctattaaccc 210  Q
    |||||||| |||||||||||||| |||||||||||||| |||| || ||||||||||    
T  19299762 acaggggctaaaaccaaaagtgctctatattacaggggctaaaaacactattaaccc 19299818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 20182318 - 20182258
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttat 216  Q
    ||||||| |||| | ||| || ||||||||||||||| |||| ||||||||||||| ||||    
T  20182318 acagggggaaaatcgaaaatgacctatattacaggggataaaaacctattaaccctattat 20182258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 20182519 - 20182551
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||| ||||||||||||||||||||||    
T  20182519 cctatattacggggggtaaagacctattaaccc 20182551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 27866224 - 27866192
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||| |||||||||||    
T  27866224 tatattacagggggtaaagacttattaaccctt 27866192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 28461114 - 28461067
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  28461114 caaaaccaaaag-gacctatattacagggggtaaaggcttattaaccct 28461067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 31551956 - 31551908
Alignment:
Q  164 aaaaccaaaagtgccctatattac-agggggtaaagacctattaaccct 211  Q
    |||||||||||||| ||||||||| |||||||||||  |||||||||||    
T  31551956 aaaaccaaaagtgctctatattacaagggggtaaagctctattaaccct 31551908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 33868530 - 33868474
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccct 211  Q
    ||||||| ||||  ||||||| ||||||||||||| || ||||||||||||||||||    
T  33868530 acagggggaaaattaaaagtgacctatattacaggaggataaagacctattaaccct 33868474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 34635945 - 34636001
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccct 211  Q
    ||||||| ||||||  || || ||||||||||||||| |||||||||||||||||||    
T  34635945 acagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 34636001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 38528556 - 38528504
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||   |||||| |||| ||||||| ||||||||||||    
T  38528556 ggggcaaaaccaaaagtgatatatattgcaggaggtaaaggcctattaaccct 38528504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 39094230 - 39094195
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39094230 cctatattacagggg-taaagacctattaaccctttt 39094195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 6e-23; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 15061780 - 15061881
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15061780 gaagaatcttcattttacaaggacggaatctaaatttatttttttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 15061879  T
Q  210 ct 211  Q
    ||    
T  15061880 ct 15061881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 30796679 - 30796579
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-aca-ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30796679 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaaggggcaaaaccaaaagtgccctatattatagggggtaaagacctattaacc 30796580  T
Q  210 c 210  Q
    |    
T  30796579 c 30796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 11956240 - 11956137
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acaggggc-aaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  11956240 gaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 11956141  T
Q  209 cctt 212  Q
    ||||    
T  11956140 cctt 11956137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 15615150 - 15615102
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15615150 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 15615102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 41064245 - 41064143
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  41064245 gaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 41064146  T
Q  209 cct 211  Q
    |||    
T  41064145 cct 41064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 21776863 - 21776964
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21776863 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaaaagtgccctatattacagaggggtaaagacctattaac 21776962  T
Q  209 cc 210  Q
    ||    
T  21776963 cc 21776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 9751682 - 9751743
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatat 220  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||    
T  9751682 ggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaacccttttttatat 9751743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 11439756 - 11439855
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||| |||           | |||||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  11439756 gaagaatcttcattttacaaggacggaatttaatttttttttttataggggcaaaaccaaaagtgctctatattacaggagataaagacctattaaccct 11439855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 11957654 - 11957707
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11957654 ggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 11957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 15060264 - 15060161
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  15060264 gaagaatcttcattttacaaggacggaatctaaaaaaaaatttttacagggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaac 15060165  T
Q  209 cctt 212  Q
    ||||    
T  15060164 cctt 15060161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 15616456 - 15616559
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  15616456 gaagaatcttcattttacaaggacggaatctaaatttttttttttacagggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaac 15616555  T
Q  209 cctt 212  Q
    ||||    
T  15616556 cctt 15616559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 41065613 - 41065716
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acaggggc-aaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||| ||||||||||           |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  41065613 gaagaatcttcattttacaaggaaggaatctaaaaaaaaaattttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 41065712  T
Q  209 cctt 212  Q
    ||||    
T  41065713 cctt 41065716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 13948588 - 13948638
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  13948588 ggggcaaaaccaaaagtgccctatattacaggaggtaaaggcctattaacc 13948638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 28819587 - 28819537
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  28819587 ggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 10012764 - 10012863
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||||| ||||||||          | ||||| ||||||||||||| ||||||||||||| || |||||||||||||||||    
T  10012764 gaagaatcttcattttacaaggacgaaatctaaaaaaaaatattataggggacaaaaccaaaagtaccctatattacagaggataaagacctattaaccc 10012863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 8367955 - 8368057
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggg-gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||||||||| ||||          ||| |  |||||||||||||||| ||||| ||||| ||||||||||||||||||||    
T  8367955 gaagaatcttcattttacaaggacggaatttaaaaaaaaaaattacaagaagcaaaaccaaaagtgctctatactacagagggtaaagacctattaaccc 8368054  T
Q  211 ttt 213  Q
    |||    
T  8368055 ttt 8368057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 30798535 - 30798636
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||| ||| ||||||||||||||  |||||||||||||||||||||    
T  30798535 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggggcaaaatcaatagtgccctatattaaggggggtaaagacctattaacc 30798634  T
Q  210 ct 211  Q
    ||    
T  30798635 ct 30798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 10011669 - 10011619
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  10011669 ggggcaaaaccaaaagtgtcctatattacacgggataaagacctattaacc 10011619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 19600022 - 19599968
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  19600022 ggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccctt 19599968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 11438387 - 11438338
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  11438387 gcaaaaccaaaagtaccctatattacagggggtaaagctctattaaccct 11438338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 35600543 - 35600600
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||    
T  35600543 aggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccttttt 35600600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 38482364 - 38482316
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| || || |||||||||||||||||||||||||||||||||||    
T  38482364 aaaaccagaattgacctatattacagggggtaaagacctattaaccctt 38482316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 889114 - 889067
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  889114 aaaaccaaatgtggcctatattacaaggggtaaagacctattaaccct 889067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 10976750 - 10976805
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||  || || ||||||||||||||||||||||||||||||||||    
T  10976750 acagggggaaaaccggaaatgacctatattacagggggtaaagacctattaaccct 10976805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 11890105 - 11890155
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  11890105 ggggcaaaaccaaaagtgacctatattaca-ggggtaaaggcctattaaccc 11890155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 19601275 - 19601326
Alignment:
Q  162 gcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctt 212  Q
    ||||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  19601275 gcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccctt 19601326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 23932460 - 23932515
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||| ||||||||||||| |||||||| |||||| ||||||||||||||| ||||    
T  23932460 aggggaaaaaccaaaagtgacctatattgcaggggataaagacctattaacacttt 23932515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 26034896 - 26034841
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||| |||||||||| || |||||||| ||| ||||||||||||||||||||||||    
T  26034896 ggggaaaaaccaaaaatgacctatattgcagagggtaaagacctattaaccctttt 26034841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 37274799 - 37274748
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||| |||||||||| |||||||||||  ||||||||||    
T  37274799 ggggcaaaaccaaaagtaccctatattatagggggtaaagctctattaaccc 37274748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 40434087 - 40434004
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattacagggggtaaa 197  Q
    |||||||||| ||||||||||||||||||||||           |||||||||||| |||||||||||||||||||||| ||||||    
T  40434087 gaagaatctttattttacaaggacggaatctaa--tttttttttacaggggcaaaatcaaaagtgccctatattacaggaggtaaa 40434004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 15395589 - 15395543
Alignment:
Q  165 aaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  15395589 aaaccaaaagtgacctattttacagggggtaaaaacctattaaccct 15395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 29104476 - 29104442
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||||||    
T  29104476 cctatattacagggggtaaagacctattaaccctt 29104442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 9750495 - 9750446
Alignment:
Q  163 caaaaccaaaagtgccctatattac-agggggtaaagacctattaaccct 211  Q
    |||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  9750495 caaaaccaaaagtgacctatattacaagggggtaaaggcctattaaccct 9750446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 21775562 - 21775529
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||||||    
T  21775562 gaagaatcttcattttacaaggacggaatctaaa 21775529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 22551554 - 22551521
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  22551554 cctatattacagggggtaaagacctattaaccct 22551521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 29521386 - 29521419
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||||||    
T  29521386 gaagaatcttcattttacaaggacggaatctaaa 29521419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 711292 - 711236
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccct 211  Q
    ||||||| ||||||| || || |||||||||||||||| ||||||||||||||||||    
T  711292 acagggggaaaaccataaatgacctatattacaggggggtaaagacctattaaccct 711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 12399611 - 12399643
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  12399611 cctatattacagggggtaaagacctattaaccc 12399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 35599364 - 35599312
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||||||    
T  35599364 ggggcaaaaccaaaagtgacctatattacaggggggtaaaggtctattaaccc 35599312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 20698523 - 20698578
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||| || || |||||||||||||  |||||||||||||||||||    
T  20698523 acaggggaaaaaccagaaatgacctatattacaggaagtaaagacctattaaccct 20698578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 24098674 - 24098721
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||| || ||||||||||| ||| ||||||||||||||||||    
T  24098674 aaaaccaaaaatgacctatattacaagggctaaagacctattaaccct 24098721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 31861523 - 31861488
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||||||| ||||||||||||||||||||    
T  31861523 cctatattacaggggataaagacctattaacccttt 31861488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 33052871 - 33052816
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||  |||| || ||||||||||| ||||||||||||||||||||||    
T  33052871 acagggggaaaataaaaaatgacctatattacaaggggtaaagacctattaaccct 33052816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 4060511 - 4060457
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||| ||| | |||||||| |||||||||||  ||||||||||||    
T  4060511 aggggcaaaaccaagagtactctatattagagggggtaaagctctattaaccctt 4060457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 12330900 - 12330854
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||| || ||||||||||||||| ||||||| |||||||||    
T  12330900 aaaaccaaaaatgacctatattacaggggttaaagacatattaaccc 12330854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 34407904 - 34407950
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||| | |||||||||||||||||| |||| |||||||    
T  34407904 aaaaccaaaagtgacttatattacagggggtaaataccttttaaccc 34407950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 214
Target Start/End: Complemental strand, 39418796 - 39418766
Alignment:
Q  184 ttacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||||||||||||    
T  39418796 ttacagggggtaaagacctattaaccctttt 39418766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 15615203 - 15615170
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||||| |||||||||||||||||||||    
T  15615203 gaagaatcttcaatttacaaggacggaatctaaa 15615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 16920659 - 16920716
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||| ||||||| || ||  ||||||||||||||||||||  |||||||||||||    
T  16920659 acagggggaaaaccagaaatgatctatattacagggggtaaagcactattaacccttt 16920716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 18229796 - 18229747
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccctt 212  Q
    |||||| ||| || ||||||||||||||| ||||||||||||||||||||    
T  18229796 aaaaccgaaaatgacctatattacaggggtgtaaagacctattaaccctt 18229747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 207
Target Start/End: Original strand, 20689053 - 20689082
Alignment:
Q  178 cctatattacagggggtaaagacctattaa 207  Q
    ||||||||||||||||||||||||||||||    
T  20689053 cctatattacagggggtaaagacctattaa 20689082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 21149112 - 21149156
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||    
T  21149112 aaaaccaaaaatgacctatattaca-ggggtaaagacctattaacc 21149156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 187
Target Start/End: Complemental strand, 21775514 - 21775485
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattac 187  Q
    ||||||||||||||||||||||||||||||    
T  21775514 aggggcaaaaccaaaagtgccctatattac 21775485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 29520186 - 29520136
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| ||||||||||||  || |||||| ||||||||||    
T  29520186 aggggcaaaaccaaaagtaccctatattaca--ggataaagatctattaaccc 29520136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 29520235 - 29520202
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||||||||||||| |||||||||||||    
T  29520235 gaagaatcttcattttacaaagacggaatctaaa 29520202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 2870909 - 2870941
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||| |||||||||||||||||||    
T  2870909 cctatattacaggaggtaaagacctattaaccc 2870941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 26888463 - 26888515
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| ||||||||| || |||||||   |||||||||||    
T  26888463 ggggcaaaaccaaaagtgacctatattatagagggtaaaacactattaaccct 26888515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 31312782 - 31312834
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttat 216  Q
    |||||| ||| || ||||||||||||||||||||   ||||||||||||||||    
T  31312782 aaaaccgaaaatgacctatattacagggggtaaaacactattaacccttttat 31312834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 33751018 - 33750986
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||| ||||||||||||||||||||||    
T  33751018 gaagaatctttattttacaaggacggaatctaa 33750986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 35798694 - 35798742
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||| ||| || ||||||||||||||| |||||||||| ||||||||    
T  35798694 aaaaccgaaaatgacctatattacaggggataaagacctactaaccctt 35798742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 36993008 - 36993040
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||| ||||||||||||||||||||    
T  36993008 cctatattacagagggtaaagacctattaaccc 36993040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 39153449 - 39153413
Alignment:
Q  178 cctatattacaggggg-taaagacctattaacccttt 213  Q
    |||||||||||||||| ||||||||||||||||||||    
T  39153449 cctatattacaggggggtaaagacctattaacccttt 39153413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 40434576 - 40434544
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    ||||||||||||||||||||||| |||||||||    
T  40434576 gaagaatcttcattttacaaggatggaatctaa 40434544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 9553501 - 9553398
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn--acagg-ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9553501 gaagaatcttcattttacaaggacggaatctaaaaaaaaataatttacaggaggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 9553402  T
Q  209 cctt 212  Q
    ||||    
T  9553401 cctt 9553398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 34158158 - 34158054
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaacc 209  Q
    |||||||||||||||||||||||||||||||||            |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34158158 gaagaatcttcattttacaaggacggaatctaatttttttttttncagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacc 34158059  T
Q  210 ctttt 214  Q
    |||||    
T  34158058 ctttt 34158054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 48168901 - 48168847
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48168901 ggggcaaaaccaaaagtgccctatattacagagggtaaagacctattaacccttt 48168847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 1594132 - 1594184
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1594132 ggcaaaaccaaaagtgacctatattacagggggtaaagacctattaacccttt 1594184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 11056782 - 11056719
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaacccttttatatat 220  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  11056782 aggggcaaaaccaaaagtgccttatattacaggggggtaaagacctattaacccttttttatat 11056719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 1831982 - 1832039
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  1831982 acagggggaaaatcaaaagtgccctatattacagggggtaaagccctattaacccttt 1832039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 17763437 - 17763335
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  17763437 gaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggggcaaaaccaaaagtgtcctatattacagaggggtaaagacctattaac 17763338  T
Q  209 cct 211  Q
    |||    
T  17763337 cct 17763335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 17764656 - 17764757
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||    
T  17764656 gaagaatcttcattttacaaggacggaatctaaaaaattttttttacagggggcaaaaccaaaagtgccctatattacagtggagtaaagacctattaac 17764755  T
Q  209 cc 210  Q
    ||    
T  17764756 cc 17764757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 8174932 - 8174888
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaagacctatta 206  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  8174932 gcaaaaccaaaaatgccctatattacagggggtaaagacctatta 8174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 9554265 - 9554321
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||||||||||    
T  9554265 ggggcaaaaccaaaagtgccctatattacaggagggtaaagatttattaaccctttt 9554321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 19272460 - 19272508
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||    
T  19272460 aaaaccaaaaatgacctatattacagggggtaaagacctattaaccctt 19272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 48896527 - 48896475
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  48896527 gcaaaaccaaaagtgacctatattacaggaggtaaagacctattaactctttt 48896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 48945236 - 48945181
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||| || |||||||||||| ||||||| |||||||||||||||    
T  48945236 aggggcaaaaccaaaaatgacctatattacagagggtaaaaacctattaacccttt 48945181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 21237351 - 21237413
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatatg 221  Q
    |||||||||||||||||| ||||||||| ||||||||||  |||||||||||||  |||||||    
T  21237351 ggggcaaaaccaaaagtgacctatattatagggggtaaatgcctattaacccttaaatatatg 21237413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 23371503 - 23371449
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| ||||||| || || |||||||||||||||||||||||||||||||||    
T  23371503 acagggggaaaaccataaatgacctatattacagggggtaaagacctattaaccc 23371449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 33757461 - 33757407
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||| |||| |||||||| |||||||||||||||||||||| |||||||||||||    
T  33757461 gggggaaaatcaaaagtgacctatattacagggggtaaagatctattaacccttt 33757407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 23161155 - 23161098
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccctt 212  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  23161155 acaggggaaaaaccaaaagtaacctatattacaggagggtaaagacctattaaccctt 23161098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 42509044 - 42509097
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||||||||||||| |||||||   ||||||||||||    
T  42509044 ggggcaaaaccaaaagtgccctatattacagagggtaaaacactattaaccctt 42509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 5219042 - 5219098
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctttt 214  Q
    ||||||||| |||||||| ||||||||||| |||||||||| |||||||||||||||    
T  5219042 ggggcaaaatcaaaagtgacctatattacaggggggtaaaggcctattaaccctttt 5219098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 23784638 - 23784582
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| |||||||  | || |||||||||||||||||||||||||||||||||||    
T  23784638 acagggggaaaaccagtaatgacctatattacagggggtaaagacctattaaccctt 23784582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 24434958 - 24434906
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccct 211  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  24434958 gggcaaaacgaaaagtgcccgatattacaggggggtaaagacctattaaccct 24434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 6269560 - 6269525
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||||||||||||||||||||||||||||    
T  6269560 cctatattacagggggtaaagacctattaacccttt 6269525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 13279423 - 13279474
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| |||||| ||| || |||||||||||||||||||||||||||||||||    
T  13279423 ggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 16902340 - 16902394
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||    
T  16902340 acaggggaaaaaccaaaaatgacctatattaca-ggggtaaagacctattaaccct 16902394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 24555904 - 24555959
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||| || || |||||||||||||||||||| |||||||||||||    
T  24555904 acaggggaaaaaccagaaatgacctatattacagggggtaaaaacctattaaccct 24555959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 42202215 - 42202148
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatatgat 223  Q
    |||||||  ||| |||||||| |||||||| |||||||||||||||||||||||| ||| ||| ||||    
T  42202215 acaggggggaaatcaaaagtgacctatattgcagggggtaaagacctattaacccatttttatttgat 42202148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1589437 - 1589387
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  1589437 ggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaac 1589387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 9915683 - 9915649
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||||||    
T  9915683 cctatattacagggggtaaagacctattaaccctt 9915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 9923595 - 9923561
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||||||    
T  9923595 cctatattacagggggtaaagacctattaaccctt 9923561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 24757997 - 24758051
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccctt 212  Q
    ||||||||||||| ||||  |||||||||||||| ||||||||||||||||||||    
T  24757997 ggggcaaaaccaatagtgatctatattacaggggggtaaagacctattaaccctt 24758051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 38193205 - 38193251
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| || || |||||||||||||||||||||||||||||||||    
T  38193205 aaaaccagaaatgacctatattacagggggtaaagacctattaaccc 38193251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 1830864 - 1830811
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||| |||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  1830864 agggggaaaatcaaaagtatcctatattacagggggtaaagccctattaaccct 1830811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 48170218 - 48170251
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||||||    
T  48170218 gaagaatcttcattttacaaggacggaatctaaa 48170251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 9554216 - 9554248
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||||||||||||    
T  9554216 gaagaatcttcattttacaaggacggaatctaa 9554248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 10688503 - 10688455
Alignment:
Q  165 aaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||| || || |||||||||||| |||||||||||||||||||||||    
T  10688503 aaaccagaaatgacctatattacagagggtaaagacctattaacccttt 10688455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 13797636 - 13797680
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttttatatatga 222  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||    
T  13797636 cctatattacagggggtaaagacctattaaccatttaataaatga 13797680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 13882635 - 13882599
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13882635 cctatattacagagggtaaagacctattaaccctttt 13882599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 14554454 - 14554506
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| ||||| |||| || ||||||||||||||||||||| ||||||||||||    
T  14554454 gggggaaaacaaaaaatgacctatattacagggggtaaaggcctattaaccct 14554506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 21298256 - 21298304
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| || ||||||||||| ||| |||||||||||||||||||    
T  21298256 aaaaccaaaaatgacctatattacaagggataaagacctattaaccctt 21298304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 26050428 - 26050464
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||| |||||||||||||||||||||    
T  26050428 cctatattacaggggttaaagacctattaaccctttt 26050464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 26059787 - 26059823
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||| |||||||||||||||||||||    
T  26059787 cctatattacaggggttaaagacctattaaccctttt 26059823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 35913310 - 35913342
Alignment:
Q  179 ctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||||||||||||||||||    
T  35913310 ctatattacagggggtaaagacctattaaccct 35913342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 39065437 - 39065381
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| ||||||  || || |||||||||||||||||||||||||||||| ||||    
T  39065437 acaggggaaaaaccggaaatgacctatattacagggggtaaagacctattaatcctt 39065381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 39580191 - 39580223
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  39580191 cctatattacagggggtaaagacctattaaccc 39580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 5909764 - 5909713
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| ||||||| || || ||||||||||| |||||||||||||||||||||    
T  5909764 ggggaaaaaccagaaatgacctatattacatggggtaaagacctattaaccc 5909713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 144
Target Start/End: Complemental strand, 24435011 - 24434980
Alignment:
Q  113 aagaatcttcattttacaaggacggaatctaa 144  Q
    ||||||||||||||||||||||||||||||||    
T  24435011 aagaatcttcattttacaaggacggaatctaa 24434980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 24845684 - 24845637
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| ||| || ||||||||||||| ||||||||||||||||||||    
T  24845684 aaaaccgaaaatgacctatattacaggaggtaaagacctattaaccct 24845637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 26050221 - 26050174
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  26050221 aaaaccgaaaatgacctatattagagggggtaaagacctattaaccct 26050174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 26059580 - 26059533
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| ||| || ||||||||| ||||||||||||||||||||||||    
T  26059580 aaaaccgaaaatgacctatattagagggggtaaagacctattaaccct 26059533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 142
Target Start/End: Complemental strand, 11056833 - 11056803
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatct 142  Q
    |||||||||||||||||||||||||||||||    
T  11056833 gaagaatcttcattttacaaggacggaatct 11056803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 210
Target Start/End: Complemental strand, 19979681 - 19979651
Alignment:
Q  180 tatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||    
T  19979681 tatattacagggggtaaagacctattaaccc 19979651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 23806283 - 23806229
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| |||| |||||||| |||||||| |||||||||||  |||||||||||    
T  23806283 acaggggaaaaatcaaaagtgacctatattgcagggggtaaaagcctattaaccc 23806229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 28000121 - 28000179
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||| ||||| |||| || |||||||||||||||||||||  | ||||||||||||    
T  28000121 acagggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccctttt 28000179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 30335385 - 30335427
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaag 198  Q
    ||||||| |||||||||| || |||||||||||||||||||||    
T  30335385 acagggggaaaaccaaaaatgacctatattacagggggtaaag 30335427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 35097643 - 35097601
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaag 198  Q
    ||||||| |||||||||| || |||||||||||||||||||||    
T  35097643 acagggggaaaaccaaaaatgacctatattacagggggtaaag 35097601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 48104739 - 48104785
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||| ||| || ||||||||||||| |||||||||||||||||||    
T  48104739 aaaaccgaaaatgacctatattacaggaggtaaagacctattaaccc 48104785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 10980621 - 10980654
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||| |||||||||||||||||||||    
T  10980621 cctatattacagagggtaaagacctattaaccct 10980654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 12005296 - 12005255
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttttatata 219  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  12005296 cctatattacagggggtaaaacactattaacccttttatata 12005255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 12814641 - 12814592
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccctt 212  Q
    ||||||| || || ||||||||||||||| ||||||||||||||||||||    
T  12814641 aaaaccacaaatgacctatattacaggggagtaaagacctattaaccctt 12814592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 13286871 - 13286924
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    |||| ||||||| || || ||||||||||| |||||||||||||||||||||||    
T  13286871 gggggaaaaccagaaatgacctatattacaagggggtaaagacctattaaccct 13286924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 21298044 - 21298015
Alignment:
Q  180 tatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||    
T  21298044 tatattacagggggtaaagacctattaacc 21298015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 25776462 - 25776495
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||| ||||||||||||||||||||||||||    
T  25776462 gaagaattttcattttacaaggacggaatctaaa 25776495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 31186700 - 31186667
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||| |||||||||||||||||||||    
T  31186700 cctatattacagagggtaaagacctattaaccct 31186667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 33767392 - 33767433
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaa 197  Q
    ||||||||||||||||||||| | ||||||||||||| ||||    
T  33767392 acaggggcaaaaccaaaagtgtcatatattacaggggataaa 33767433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 38192995 - 38192958
Alignment:
Q  178 cctatattacaggggg-taaagacctattaaccctttt 214  Q
    |||||||||||||||| |||||||||||||||||||||    
T  38192995 cctatattacaggggggtaaagacctattaaccctttt 38192958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 44568894 - 44568849
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||| ||| || |||||||||||||||||||||| |||||||||    
T  44568894 aaaaccgaaaatgacctatattacagggggtaaagatctattaacc 44568849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 3307701 - 3307733
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||| |||||||||    
T  3307701 cctatattacagggggtaaagacttattaaccc 3307733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 5766670 - 5766638
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||| |||||||||    
T  5766670 cctatattacagggggtaaagacatattaaccc 5766638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 8174985 - 8174953
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||| ||||||||||||    
T  8174985 gaagaatcttcattttacaaagacggaatctaa 8174953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 8336492 - 8336444
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    |||||||||| |||||| ||||||||||| |||||| || |||||||||    
T  8336492 gggcaaaaccgaaagtgtcctatattacatggggtagagccctattaac 8336444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 193
Target Start/End: Original strand, 11058178 - 11058210
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacaggggg 193  Q
    ||||||||||||||| |||||||||||||||||    
T  11058178 ggcaaaaccaaaagtaccctatattacaggggg 11058210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 24555737 - 24555701
Alignment:
Q  178 cctatattacagg-gggtaaagacctattaacccttt 213  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24555737 cctatattacaggagggtaaagacctattaacccttt 24555701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 31431000 - 31430940
Alignment:
Q  156 acaggggc-aaaaccaaaagtgccctatattacagggggtaaagac-ctattaaccctttt 214  Q
    |||||||| |||||||||||||| ||||||||||||||  ||| || ||||||||||||||    
T  31431000 acaggggctaaaaccaaaagtgcactatattacaggggccaaaaacactattaaccctttt 31430940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 45865657 - 45865709
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccc 210  Q
    |||| ||||||||||||| ||||||||||| ||||||| || |||||||||||    
T  45865657 ggggtaaaaccaaaagtgacctatattacaggggggtagaggcctattaaccc 45865709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 50881380 - 50881492
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||| ||||||||||||           ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  50881380 gaagaatcttcattttacaatgacggaatctaatttttttttttacagggggcaaaaccaaaagtggcctatattacagggggtaaagacctattaaccc 50881479  T
Q  211 ttttatatatgat 223  Q
    ||| | |||||||    
T  50881480 tttgaaatatgat 50881492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 54554434 - 54554380
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54554434 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 54554380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 20962294 - 20962191
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  20962294 gaagaatcttcattttacaaggacggaatctaaaaaaaaatttttacagggggcaaaaccaaaagtgccatatattacagggggtaaagatctattaacc 20962195  T
Q  210 cttt 213  Q
    ||||    
T  20962194 cttt 20962191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 29248342 - 29248240
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acag-gggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  29248342 gaagaatcttcattttacaaggacggaatctaaaaaaataaatttacagcgggtaaaaccaaaagtgtcctatattacagggggtaaagacctattaacc 29248243  T
Q  210 ctt 212  Q
    |||    
T  29248242 ctt 29248240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 34739989 - 34739887
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acaggggc-aaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  34739989 gaagaatcttcattttacaaggacggaatctaaaaaaatttttttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 34739890  T
Q  209 cct 211  Q
    |||    
T  34739889 cct 34739887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 43860923 - 43860973
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43860923 caaaaccaaaagtgccctatattacaggaggtaaagacctattaacccttt 43860973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 12566944 - 12566996
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattac-agggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12566944 ggggcaaaaccaaaagtgccctatattacaagggggtaaagacctattaaccc 12566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 34741350 - 34741448
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaa 207  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  34741350 gaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaa 34741448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 20963656 - 20963757
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  20963656 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaagccaaaagtgccctatattacaggggggtaaagacctattaac 20963755  T
Q  209 cc 210  Q
    ||    
T  20963756 cc 20963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 34027200 - 34027251
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  34027200 ggggcaaaaccaaaagtgacctatattacagggggtaaaggcctattaaccc 34027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 54555357 - 54555408
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  54555357 ggggcaaaaccaaaagtgccatatattacagggggtaaagacttattaaccc 54555408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 21994424 - 21994328
Alignment:
Q  113 aagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||| |||||||||||||||||||||||          ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  21994424 aagaatctttattttacaaggacggaatctaaaaaaaaaatt-acaggggacaaaatcaaaagtgtcctatattacagggggtaaagacctattaacc 21994328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 29249715 - 29249769
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  29249715 ggggcaaaaccaaaagttccctatattacaggggggtaaagacctattaaccctt 29249769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 21780176 - 21780119
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  21780176 acagggggaaaaccgaaaatgacctatattacagggggtaaagacctattaacccttt 21780119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 550725 - 550673
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||||||||    
T  550725 aggggcaaaactaaaaatgacctatattacagggggtaaagacctattaaccc 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 20125443 - 20125483
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttttatat 218  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20125443 cctatattacagggggtaaagacctattaacccttttatat 20125483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 51754210 - 51754261
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  51754210 caaaaccaaaagtaccctatattacagggggtaaagctctattaaccctttt 51754261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 11861951 - 11861902
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||| |||||||||||||||||||| || |||||||||    
T  11861951 gcaaaaccaaaagtgctctatattacagggggtaaaggcccattaaccct 11861902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 50879957 - 50879908
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  50879957 gcaaaaccaaaagtggcctatattacaggaagtaaagacctattaaccct 50879908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 51164026 - 51164075
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  51164026 ggggcaaaaccaaaagtgacctatattatagggggtaaaggcctattaac 51164075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 55500411 - 55500464
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  55500411 ggggcaaaaccaaaaatgtcctatattacaggggggtaaagacctattaaccct 55500464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 12352470 - 12352514
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  12352470 aaaaccaaaagtgacctatattacagggggtaaaggcctattaac 12352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 15694511 - 15694459
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||   ||||||||||||||||||| |||||||||||    
T  15694511 aggggcaaaaccaaaagtggtgtatattacagggggtaaaggcctattaaccc 15694459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 24215752 - 24215800
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| || || |||||||||||||||||||||||||||||||||||    
T  24215752 aaaaccagaaatgacctatattacagggggtaaagacctattaaccctt 24215800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 34025969 - 34025913
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattac-agggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||| |||||||||| |||||||||||  |||||||||||    
T  34025969 acaggggcaaaaccaaaagtgacctatattacaagggggtaaaggtctattaaccct 34025913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 220
Target Start/End: Original strand, 38656066 - 38656122
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatat 220  Q
    ||||| |||| || ||||||||| |||||||||||||||||||||||||||| ||||    
T  38656066 aaaacaaaaaatgacctatattatagggggtaaagacctattaacccttttaaatat 38656122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 51752734 - 51752686
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  51752734 ggggcaaaatcaaaagtgtcatatattacagggggtaaagacctattaa 51752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 11563528 - 11563575
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| || || ||||||||||||||||||||||||||||||||||    
T  11563528 aaaaccagaaatgacctatattacagggggtaaagacctattaaccct 11563575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 24701207 - 24701258
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| ||||||||||||| |||||||| |||||||||||| |||||||||||    
T  24701207 gggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccc 24701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 41331815 - 41331768
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  41331815 aaaaccaaaagtgacctatattgcaggggataaagacctattaaccct 41331768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 48029465 - 48029411
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||| || |||| |||||||||||||||| |||||||||||||||    
T  48029465 ggggcaaaaccaaaa-tgacctaaattacagggggtaaaggcctattaaccctttt 48029411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 50138539 - 50138488
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| |||||| ||| || |||||||||||||||||||||||||||||||||    
T  50138539 ggggaaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 14183659 - 14183609
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||||||| ||||||||||   ||||||||||||    
T  14183659 gcaaaaccaaaagtgccctatattagagggggtaaaacactattaaccctt 14183609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 22272976 - 22272927
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||| ||| || |||||||||||||||||||| |||||||||||||||    
T  22272976 aaaaccgaaaatgacctatattacagggggtaaaaacctattaacccttt 22272927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 37273420 - 37273453
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  37273420 cctatattacagggggtaaagacctattaaccct 37273453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 49629733 - 49629631
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||| ||||||| |||||||||||||||          | ||||| |||||||||||||| ||||| |||||||||||||||  ||||||||||    
T  49629733 gaagaatctttattttaccaggacggaatctaaaaaacaaaattataggggacaaaaccaaaagtgtcctat-ttacagggggtaaaggtctattaaccc 49629635  T
Q  211 tttt 214  Q
    ||||    
T  49629634 tttt 49629631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 11862032 - 11862084
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||  ||||||||||  |||||||| ||||||||||||    
T  11862032 ggggcaaaaccaaaagtgttctatattacaaagggtaaaggcctattaaccct 11862084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 20613017 - 20612969
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||||||||    
T  20613017 gggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaa 20612969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 35539650 - 35539602
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| || ||||||||||||||| |||||||||||| ||||||    
T  35539650 aaaaccaaaaatgacctatattacaggggataaagacctattgaccctt 35539602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 36405856 - 36405912
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| |||||||||| || |||||||||||||||||||||  | ||||||||||    
T  36405856 acaggggaaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 36405912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 40479526 - 40479574
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||| ||||||||||||| || ||| ||||||||||||||    
T  40479526 caaaaccaaaagtaccctatattacagaggataatgacctattaaccct 40479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 51162129 - 51162073
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccctttt 214  Q
    ||||||||| |||||||| ||||||||| |||||| ||||| |||||||||||||||    
T  51162129 ggggcaaaatcaaaagtgacctatattatagggggataaaggcctattaaccctttt 51162073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 51752783 - 51752751
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||||||||||||    
T  51752783 gaagaatcttcattttacaaggacggaatctaa 51752751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 52264544 - 52264458
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acaggggcaaaaccaaaagtgccctatattacagggggtaaa 197  Q
    |||||||||| |||||||||||||||||||||||           |||||||||||| |||||||| |||||||||| |||||||||    
T  52264544 gaagaatcttgattttacaaggacggaatctaaaactttttttttacaggggcaaaatcaaaagtggcctatattacggggggtaaa 52264458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 9136410 - 9136465
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||||||  |||||||||||||| ||||  |||||||||| ||||    
T  9136410 ggggcaaaaccaaaagtgatctatattacaggggataaatgcctattaaccttttt 9136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 50727636 - 50727589
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||    
T  50727636 aaaaccagaaatgacctatattacagggggtaaaaacctattaaccct 50727589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 50735650 - 50735603
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| || || |||||||||||||||||||| |||||||||||||    
T  50735650 aaaaccagaaatgacctatattacagggggtaaaaacctattaaccct 50735603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 7535429 - 7535495
Alignment:
Q  156 acaggggc-aaaaccaaaagtgccctatattacagggggtaaagac-ctattaacccttttatatat 220  Q
    |||||||| |||||||||||||| ||||||||||||||  ||| || |||||||||||| |||||||    
T  7535429 acaggggctaaaaccaaaagtgcactatattacaggggccaaaaacactattaacccttatatatat 7535495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 16493550 - 16493516
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||| |||||||||||||||||||||    
T  16493550 cctatattacaggaggtaaagacctattaaccctt 16493516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 17289982 - 17290032
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||| ||||| |||| || ||||||||| ||||||||||||||||||||||    
T  17289982 gggggaaaacaaaaaatgacctatattatagggggtaaagacctattaacc 17290032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 27579546 - 27579516
Alignment:
Q  178 cctatattacagggggtaaagacctattaac 208  Q
    |||||||||||||||||||||||||||||||    
T  27579546 cctatattacagggggtaaagacctattaac 27579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 15695184 - 15695237
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccct 211  Q
    ||||||||||||||||||   |||| |||||||| |||||||||||||||||||    
T  15695184 ggggcaaaaccaaaagtggtgtataatacaggggggtaaagacctattaaccct 15695237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 17289794 - 17289741
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccct 211  Q
    |||| |||||||||| || |||||||| ||||||| ||||||||||||||||||    
T  17289794 gggggaaaaccaaaaatgacctatatttcagggggataaagacctattaaccct 17289741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 17695978 - 17696031
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| | ||||||||| ||||||||||  |||||||||||    
T  17695978 ggggcaaaaccaaaagtgtcttatattacaggggggtaaaggactattaaccct 17696031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 18320698 - 18320755
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccctt 212  Q
    ||||||| ||||||  || || ||||||||||||||| ||||||||||||||||||||    
T  18320698 acagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccctt 18320755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 21246528 - 21246475
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccct 211  Q
    |||| |||||| ||| || ||||||||||||||| |||||||||||||||||||    
T  21246528 gggggaaaaccgaaaatgacctatattacaggggtgtaaagacctattaaccct 21246475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 21798384 - 21798331
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccct 211  Q
    |||| ||||||| || || |||||||||||||||| ||||||||||||||||||    
T  21798384 ggggtaaaaccagaaatgacctatattacaggggggtaaagacctattaaccct 21798331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 35370399 - 35370448
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||| || |||||||||||||||||||||  | |||||||||||    
T  35370399 aaaaccaaaaatgacctatattacagggggtaaagcaccattaacccttt 35370448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 35539805 - 35539838
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||||| |||||||||||||    
T  35539805 cctatattacagggggtaaatacctattaaccct 35539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 43537551 - 43537518
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  43537551 gaagaatctttattttacaaggacggaatctaaa 43537518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 46426201 - 46426168
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  46426201 gaagaatctttattttacaaggacggaatctaaa 46426168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 145
Target Start/End: Original strand, 49630558 - 49630587
Alignment:
Q  116 aatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||    
T  49630558 aatcttcattttacaaggacggaatctaaa 49630587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 145
Target Start/End: Complemental strand, 55499347 - 55499318
Alignment:
Q  116 aatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||    
T  55499347 aatcttcattttacaaggacggaatctaaa 55499318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 145210 - 145254
Alignment:
Q  169 caaaagtgccctatattacaggggg-taaagacctattaaccctt 212  Q
    |||||||| | |||||||||||||| |||||||||||||||||||    
T  145210 caaaagtgacttatattacagggggataaagacctattaaccctt 145254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 937704 - 937660
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    |||||||||||||| ||||||||||| ||||||||| | ||||||    
T  937704 caaaaccaaaagtgacctatattacaaggggtaaaggcttattaa 937660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 7514631 - 7514579
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||| || |  ||||||| ||||||| ||||||||||||||    
T  7514631 ggcaaaaccaaaagtgacccaatttacaggaggtaaaggcctattaacccttt 7514579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 9001475 - 9001443
Alignment:
Q  179 ctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||| |||||||||||||    
T  9001475 ctatattacagggggtaaaaacctattaaccct 9001443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 9410292 - 9410340
Alignment:
Q  163 caaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  9410292 caaaaccaaaagtgccctatattacagaggggtaaaacactattaaccc 9410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 12566895 - 12566927
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||| ||||||||    
T  12566895 gaagaatcttcattttacaaggacagaatctaa 12566927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 13128436 - 13128484
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||| ||||||||| || |||||||  |||||||||||||    
T  13128436 aaaaccaaaagtgacctatattatagagggtaaatgcctattaaccctt 13128484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 21780361 - 21780413
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggg-ggtaaagacctattaaccc 210  Q
    |||| ||||||| || || |||||||||||||| |||||||||||||||||||    
T  21780361 ggggaaaaaccagaaatgacctatattacagggaggtaaagacctattaaccc 21780413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 21798590 - 21798622
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||| |||||||||||||||||    
T  21798590 cctatattacaggggataaagacctattaaccc 21798622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 31110489 - 31110529
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaaga 199  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  31110489 ggggaaaaaccaaaaatgacctatattacagggggtaaaga 31110529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 40479473 - 40479501
Alignment:
Q  112 gaagaatcttcattttacaaggacggaat 140  Q
    |||||||||||||||||||||||||||||    
T  40479473 gaagaatcttcattttacaaggacggaat 40479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 44198646 - 44198610
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacagggggtaaag 198  Q
    |||||||||||||||  ||||||||||||||||||||    
T  44198646 gcaaaaccaaaagtggtctatattacagggggtaaag 44198610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 46094265 - 46094297
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||| ||||||||||||||||||||    
T  46094265 cctatattacagagggtaaagacctattaaccc 46094297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 46360896 - 46360952
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| ||||| |||| || |||||||||||||||||||||  | ||||||||||    
T  46360896 acagggggaaaacaaaaaatgacctatattacagggggtaaagcaccattaaccctt 46360952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 207
Target Start/End: Complemental strand, 47622008 - 47621976
Alignment:
Q  175 tgccctatattacagggggtaaagacctattaa 207  Q
    |||||||||||||||||||||||| ||||||||    
T  47622008 tgccctatattacagggggtaaagccctattaa 47621976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 51396189 - 51396157
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||| |||||||||||||||||||    
T  51396189 tatattacaggggataaagacctattaaccctt 51396157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 51965404 - 51965372
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||| ||||||||||||||||||    
T  51965404 cctatattacagggagtaaagacctattaaccc 51965372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 54354196 - 54354248
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccc 210  Q
    |||| ||||||||||||| |||||||| || |||||||||| |||||||||||    
T  54354196 gggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 54354248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 27164615 - 27164714
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27164615 gaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 27164714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 27163217 - 27163113
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acaggggc-aaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  27163217 gaagaatcttcattttacaaggacggaatctaaaaaaatttttttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 27163118  T
Q  209 ccttt 213  Q
    |||||    
T  27163117 ccttt 27163113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 42349061 - 42348961
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||| ||||          ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42349061 gaagaatcttcattttacaaggacggaatttaaaaagaaaaattacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaacc 42348962  T
Q  210 c 210  Q
    |    
T  42348961 c 42348961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 39810043 - 39810145
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  39810043 gaagaatcttcattttacaaggacggaatctaaaaaaaataatttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 39810142  T
Q  209 cct 211  Q
    |||    
T  39810143 cct 39810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 1600128 - 1600077
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  1600128 ggggcaaaaccaaaagtggcttatattacagggggtaaagacctattaaccc 1600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 2270297 - 2270348
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  2270297 ggggcaaaaccaaaagtgacctataatacagggggtaaagacctattaaccc 2270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 39808699 - 39808649
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39808699 ggggcaaaaccaaaagtgccctatattaca-ggggtaaagacctattaaccc 39808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 42350134 - 42350238
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  42350134 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaaaaatgctctatattacaggggggtaaagacctattaac 42350233  T
Q  209 ccttt 213  Q
    |||||    
T  42350234 ccttt 42350238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 31985063 - 31985010
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggg-ggtaaagacctattaaccct 211  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  31985063 ggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 31985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 40702016 - 40702069
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  40702016 ggggcaaaacgaaaagtgacctatattacagggggtaaaggcctattaaccctt 40702069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 39513918 - 39513866
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||    
T  39513918 ggggcaaaaccaaaagtgacctatattacagggggtaaatgcctattaaccct 39513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 28575115 - 28575170
Alignment:
Q  157 caggggcaaaaccaaaagtgccctatattacaggg-ggtaaagacctattaaccct 211  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  28575115 cagggggaaaaccaaaagtgccctatattacagggtggtaaagtcctattaaccct 28575170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 27987351 - 27987293
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||| |||||| ||| || ||||||||| |||||||||||||||||||||||||||    
T  27987351 acagggggaaaaccgaaaatgacctatattatagggggtaaagacctattaaccctttt 27987293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 28044653 - 28044595
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||| |||||| ||| || ||||||||| |||||||||||||||||||||||||||    
T  28044653 acagggggaaaaccgaaaatgacctatattatagggggtaaagacctattaaccctttt 28044595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 28561488 - 28561430
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||  ||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28561488 acaggggggaaaccaaaagtgccctatattacagggggtaaagctctattaaccttttt 28561430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 28566986 - 28566928
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||  ||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28566986 acaggggggaaaccaaaagtgccctatattacagggggtaaagctctattaaccttttt 28566928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 34901553 - 34901503
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  34901553 ggggcaaaaccaaaagtgacctatattacagggggtaaaagcctattaacc 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 1601210 - 1601312
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatct--aaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    |||||||||||||||||||||||||||||||  |||          |||||||||||| |||||||| ||||||||| | |||||||||| |||||||||    
T  1601210 gaagaatcttcattttacaaggacggaatctaaaaaaaaaatatttacaggggcaaaatcaaaagtgtcctatattagaggggggtaaaggcctattaac 1601309  T
Q  209 cct 211  Q
    |||    
T  1601310 cct 1601312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 1601725 - 1601672
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  1601725 ggggcaaaaccaaaagtgccctatattacagaggggtaaaggtctattaaccct 1601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 3912483 - 3912539
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| |||||| ||| || ||||||||||||||||||||||| |||||||||||    
T  3912483 acagggggaaaaccgaaaatgacctatattacagggggtaaagacttattaaccctt 3912539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 25277731 - 25277767
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||||||||||||||||||    
T  25277731 cctatattacagggggtaaagacctattaaccctttt 25277767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 2269093 - 2269042
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattac-agggggtaaagacctattaaccc 210  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||||||    
T  2269093 gggcaaaaccaaaagtgacctatattacaaggaggtaaagacctattaaccc 2269042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 5873741 - 5873686
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||||||||| |||||||| |||||| ||||| ||||||||||||    
T  5873741 acagggggaaaaccaaaagtgacctatattgcaggggttaaagccctattaaccct 5873686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 14329611 - 14329658
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| ||| || ||||||||||||||||||||||||||||||||||    
T  14329611 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccct 14329658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 27543466 - 27543407
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccctttt 214  Q
    ||||||| |||||| ||| || |||||||||||||||| |||||||||||||||||||||    
T  27543466 acagggggaaaaccgaaaatgacctatattacaggggggtaaagacctattaaccctttt 27543407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 34985333 - 34985380
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| || || ||||||||||||||||||||||||||||||||||    
T  34985333 aaaaccagaaatgacctatattacagggggtaaagacctattaaccct 34985380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 165 - 220
Target Start/End: Original strand, 39515134 - 39515189
Alignment:
Q  165 aaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatat 220  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||||  |||||||    
T  39515134 aaaccaaaagtgacctatattacagggagtaaaggcctattaaccctaatatatat 39515189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 4105291 - 4105344
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatat 218  Q
    ||||| |||| || ||||||||||||||| |||||||||||||||||||||||||    
T  4105291 aaaacaaaaaatgacctatattacagggg-taaagacctattaacccttttatat 4105344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Complemental strand, 29309597 - 29309563
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||||||    
T  29309597 cctatattacagggggtaaagacctattaaccctt 29309563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 31986234 - 31986287
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca--gggggtaaagacctattaaccc 210  Q
    |||||||||| ||||||| |||||||||||  ||||||||||||||||||||||    
T  31986234 ggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 31986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 12330365 - 12330332
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  12330365 cctatattacagggggtaaagacctattaaccct 12330332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 27198190 - 27198141
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||| ||| || ||||||||||||||| ||||||||||||||||||||    
T  27198190 aaaaccgaaaatgacctatattacaggggataaagacctattaacccttt 27198141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 39913891 - 39913924
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||||||    
T  39913891 gaagaatcttcattttacaaggacggaatctaaa 39913924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 960522 - 960554
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  960522 cctatattacagggggtaaagacctattaaccc 960554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 21692608 - 21692664
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| |||||||||| || |||||||||||||||||||||  | ||||||||||    
T  21692608 acagggggaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 21692664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 25601972 - 25602008
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25601972 cctatattacatggggtaaagacctattaaccctttt 25602008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 27543650 - 27543682
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  27543650 cctatattacagggggtaaagacctattaaccc 27543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 27987552 - 27987584
Alignment:
Q  179 ctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||||||||||||||||||    
T  27987552 ctatattacagggggtaaagacctattaaccct 27987584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 28044854 - 28044886
Alignment:
Q  179 ctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||||||||||||||||||    
T  28044854 ctatattacagggggtaaagacctattaaccct 28044886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 37402535 - 37402483
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| ||||||||||||| |||||||| |||||||||||| | ||||||||||    
T  37402535 gggggaaaaccaaaagtgacctatattgcagggggtaaaggcttattaaccct 37402483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 43400701 - 43400669
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||||    
T  43400701 tatattacagggggtaaagacctattaaccctt 43400669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 25653755 - 25653700
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||| |||||||||| || ||||||||||||||||||||   ||||||||||||||    
T  25653755 gggggaaaaccaaaaatgacctatattacagggggtaaaacactattaaccctttt 25653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 29309799 - 29309834
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||||||| |||||||||||||||    
T  29309799 cctatattacagggggtaaaaacctattaacccttt 29309834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 30222090 - 30222145
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| |||||| ||| || |||||||||||||||||||||  |||||||||||    
T  30222090 acagggggaaaaccgaaaatgacctatattacagggggtaaagcactattaaccct 30222145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 35862747 - 35862794
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||  ||||||| |||||||||||| ||||||||||||    
T  35862747 aaaaccaaaagtgatctatattgcagggggtaaaggcctattaaccct 35862794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 40411404 - 40411455
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||| |||||| ||| || |||||||| |||||||||||||||||||||||    
T  40411404 aggggaaaaacctaaaatgacctatattgcagggggtaaagacctattaacc 40411455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 43945220 - 43945169
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| |||||| ||| || | |||||||||||||||||||||||||||||||    
T  43945220 ggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaaccc 43945169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 35009956 - 35010002
Alignment:
Q  165 aaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||||    
T  35009956 aaaccacaagtgacctatattgcagggggtaaagacatattaaccct 35010002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 178 - 208
Target Start/End: Complemental strand, 40652651 - 40652621
Alignment:
Q  178 cctatattacagggggtaaagacctattaac 208  Q
    |||||||||||||||||||||||||||||||    
T  40652651 cctatattacagggggtaaagacctattaac 40652621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 40701401 - 40701347
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacaggg-ggtaaagacctattaacc 209  Q
    |||||||||||| | |||||| |||||||||||||| ||||||||||| ||||||    
T  40701401 acaggggcaaaaacgaaagtgacctatattacagggcggtaaagacctgttaacc 40701347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 40770576 - 40770523
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatat 218  Q
    |||||||||| || ||||||||||| ||| |||| ||||||||||||||||||||    
T  40770576 aaaaccaaaaatgacctatattacaaggg-taaatacctattaacccttttatat 40770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 1602855 - 1602888
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||||||| |||||||||||||||||||    
T  1602855 gaagaatcttcattatacaaggacggaatctaaa 1602888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 4482075 - 4482042
Alignment:
Q  180 tatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||||| |||||||||||||||    
T  4482075 tatattacagggggtaaaaacctattaacccttt 4482042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 207
Target Start/End: Complemental strand, 8388146 - 8388117
Alignment:
Q  178 cctatattacagggggtaaagacctattaa 207  Q
    ||||||||||||||||||||||||||||||    
T  8388146 cctatattacagggggtaaagacctattaa 8388117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 9768261 - 9768294
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  9768261 gaagaatcttgattttacaaggacggaatctaaa 9768294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 19157981 - 19157924
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttat 216  Q
    |||| |||||||||| || ||||||| |||||||||||||  | ||||||||||||||    
T  19157981 gggggaaaaccaaaaatgacctatataacagggggtaaagcaccattaacccttttat 19157924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 28561976 - 28562009
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  28561976 gaagaatctttattttacaaggacggaatctaaa 28562009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 28562024 - 28562077
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||| |||| ||||||||| |||||||||||||| ||||| ||||| ||||||    
T  28562024 agggggaaaatcaaaagtgctctatattacaggggttaaagccctataaaccct 28562077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 28567474 - 28567507
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  28567474 gaagaatctttattttacaaggacggaatctaaa 28567507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 28567522 - 28567575
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||| |||| ||||||||| |||||||||||||| ||||| ||||| ||||||    
T  28567522 agggggaaaatcaaaagtgctctatattacaggggttaaagccctataaaccct 28567575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 34504182 - 34504232
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||| ||||||||||||| | |||||||||  ||||||||||||||||||||    
T  34504182 aggggaaaaaccaaaagtgacatatattaca--gggtaaagacctattaaccc 34504232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 39808748 - 39808715
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||||||||||||||||| |||||||||    
T  39808748 gaagaatcttcattttacaaggacagaatctaaa 39808715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 40652660 - 40652712
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||| ||||||| || || ||||||||||||||| |||||||||||||||||||    
T  40652660 gggggaaaaccagaaatgacctatattacagggg-taaagacctattaaccctt 40652712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 41708879 - 41708826
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||| |||||||||| || |||||||||||||||||||||  | ||||||||||    
T  41708879 ggggaaaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 41708826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 1600175 - 1600143
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    ||||||||||||||||| |||||||||||||||    
T  1600175 gaagaatcttcattttataaggacggaatctaa 1600143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 5703099 - 5703055
Alignment:
Q  164 aaaaccaaaagtgccctatattacag-ggggtaaagacctattaa 207  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||    
T  5703099 aaaactaaaagtgccctatattacaggggggtaaagccctattaa 5703055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 6819247 - 6819195
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccc 210  Q
    |||| ||||||||||||| |||||||| || |||||||||| |||||||||||    
T  6819247 gggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 6819195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 6952929 - 6952961
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||| |||||||||||||||||||    
T  6952929 tatattacaggggataaagacctattaaccctt 6952961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 9513860 - 9513828
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||| |||||||||    
T  9513860 cctatattacagggggtaaagacatattaaccc 9513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 12330590 - 12330622
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||| ||||||||||||    
T  12330590 tatattacagggggtaaagatctattaaccctt 12330622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 16434549 - 16434609
Alignment:
Q  156 acaggggc-aaaaccaaaagtgccctatattacagggggtaaagac-ctattaaccctttt 214  Q
    |||||||| |||||||||||||| ||||||||||||||  ||| || ||||||||||||||    
T  16434549 acaggggctaaaaccaaaagtgcactatattacaggggccaaaaacactattaaccctttt 16434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 24971203 - 24971239
Alignment:
Q  179 ctatattacagggg-gtaaagacctattaaccctttt 214  Q
    |||||||||||||| ||||||||||||||||||||||    
T  24971203 ctatattacaggggggtaaagacctattaaccctttt 24971239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 31343608 - 31343660
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| ||||||||||||| ||||||||||| |||||||||  | |||||||||    
T  31343608 gggggaaaaccaaaagtgacctatattacatggggtaaagcaccattaaccct 31343660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 421
Target Start/End: Original strand, 37618809 - 37618865
Alignment:
Q  365 ttgtaacattatggttgaccaatatcaccaattctatatcacccgaatgctacccga 421  Q
    |||||||||| || || |||||| ||||||||||||| |||||| | ||||||||||    
T  37618809 ttgtaacattgtgtttcaccaatgtcaccaattctatgtcacccaagtgctacccga 37618865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 9e-22; HSPs: 102)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 14625470 - 14625367
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  14625470 gaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggggcaaaaccaaaagtgtcctatattacagggggtaaagacctattaacc 14625371  T
Q  210 cttt 213  Q
    ||||    
T  14625370 cttt 14625367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 43635933 - 43635834
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||| |||||||           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43635933 gaagaatcttcattttacaaggacgaaatctaattttttttttaaagggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 43635834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 14626735 - 14626840
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagg-ggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14626735 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaac 14626834  T
Q  209 cctttt 214  Q
    ||||||    
T  14626835 cctttt 14626840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 26097035 - 26097086
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26097035 ggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccctt 26097086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 5560972 - 5560876
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacaggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaa 207  Q
    |||||||||| |||||||||||||||||||||||          ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||    
T  5560972 gaagaatctttattttacaaggacggaatctaaaaaaacaaattacagggggaaaaccaaaagtgctctatattacaggggggtaaagacctattaa 5560876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 1825345 - 1825296
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1825345 ggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 32131908 - 32131961
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  32131908 aggggcaaaaccgaaagtgacctatattacagggggtaaagacctattaaccct 32131961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 8928866 - 8928814
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  8928866 ggggcaaaatcaaaagtgccttatattacagggggtaaagacctattaaccct 8928814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 9442946 - 9443048
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-aca-ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  9442946 gaagaatcttcattttacaaggacggaatctaaaaaattttttttacaaggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaac 9443045  T
Q  209 cct 211  Q
    |||    
T  9443046 cct 9443048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 13903379 - 13903431
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  13903379 ggcaaaaccaaaagtgacctatattacagggggtaaagatctattaacccttt 13903431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 23322566 - 23322668
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  23322566 gaagaatcttcattttacaaggacggaatctaaaaaaaaataattacagggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaac 23322665  T
Q  209 cct 211  Q
    |||    
T  23322666 cct 23322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 26095865 - 26095813
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  26095865 ggggcaaaaccataagtgacctatattacagggggtaaagacctattaaccct 26095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 2273600 - 2273503
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           |||| ||  |||| |||||||||||||||||||||||||||||||||||||||    
T  2273600 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagagggcaaacaaaaagtgccctatattacagggggtaaagacctattaac 2273503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 13902116 - 13902061
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  13902116 ggggcaaaaccaaaactgccctatattacaggtggtaaagacctattaaccatttt 13902061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 9441668 - 9441564
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||| | |||||||||| |||||||||||||||||||    
T  9441668 gaagaatcttcattttacaaggacggaatctaaaaaaaattttttacagggggcaaaaccaaaagtgtcttatattacaggggggtaaagacctattaac 9441569  T
Q  209 ccttt 213  Q
    |||||    
T  9441568 ccttt 9441564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 14978714 - 14978768
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||    
T  14978714 aggggcaaaaccaaaagtgtcctatataacagggggtaaaggcctattaaccctt 14978768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 35979587 - 35979645
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||||    
T  35979587 acaggggcaaaatcaaaagtgacttatattacagggggaaaagacctattaaccctttt 35979645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 51470179 - 51470129
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  51470179 gggcaaaaccaaaagtgacttatattacagggggtaaagacctattaaccc 51470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 38742384 - 38742441
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||||| ||||||| ||||||||||||||||||||||  |||||||||||||    
T  38742384 acaggggcaaaatcaaaagtaccctatattacagggggtaaagctctattaacccttt 38742441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 16785773 - 16785721
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  16785773 ggggcaaaaccaaaagtgacctacattacagggggtaaaggcctattaaccct 16785721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 15336429 - 15336378
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||||||||    
T  15336429 acaggggaaaaaccaaaaatgacctatattacagggggtaaagacctattaa 15336378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 52083631 - 52083580
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccc 210  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  52083631 gggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccc 52083580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 23321315 - 23321257
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaacccttttat 216  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||    
T  23321315 ggggcaaaaccaaaagtgccctatattacaggaggataaagatctattaaccctattat 23321257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 33667638 - 33667691
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccct 211  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  33667638 ggggcaaaaccaaaagtgacctatattacaggggtgtaaaggcctattaaccct 33667691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 40247386 - 40247435
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaa 207  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  40247386 gggggaaaaccaaaagtgccctatattacatgggggtaaagacctattaa 40247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 47022094 - 47022131
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttta 215  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47022094 cctatattacagggggtaaagacctattaaccctttta 47022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 52084782 - 52084884
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca--gggggtaaagacctattaa 207  Q
    |||||||||| |||||||||||||||||||||||           ||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||    
T  52084782 gaagaatctttattttacaaggacggaatctaaaaaaaaaattttacaggggacaaaaccaaaagtgctctatattacagggggggtaaagacctattaa 52084881  T
Q  208 ccc 210  Q
    |||    
T  52084882 ccc 52084884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 6225369 - 6225433
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttatatat 220  Q
    ||||||| ||||||||||||| |||||||| ||||  ||||||||||||||||| | ||||||||    
T  6225369 acagggggaaaaccaaaagtgacctatattgcaggaagtaaagacctattaaccttattatatat 6225433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 14978362 - 14978307
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||| ||||||||||||||||||||||| | | |||||||||||||||||||||||    
T  14978362 aggggaaaaaccaaaagtgccctatattata-gaggtaaagacctattaaccctttt 14978307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 33645066 - 33645014
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||| ||||||    
T  33645066 aggggcaaaatcaaaagtgacctatattacagggggtaaagatctaataaccc 33645014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 47146377 - 47146425
Alignment:
Q  162 gcaaaaccaaaagtgccctatattac-agggggtaaagacctattaacc 209  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  47146377 gcaaaaccaaaagtgacctatattacaagggggtaaagacctattaacc 47146425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 47221949 - 47221997
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  47221949 aaaaccaaaagtgacctatattgcaggaggtaaagacctattaaccctt 47221997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 16699110 - 16699169
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattac-agggggtaaagacctattaacccttttata 217  Q
    |||| ||||||| || || |||||||||| ||||||||||||||||||||||||||||||    
T  16699110 ggggaaaaaccagaaatgacctatattaccagggggtaaagacctattaacccttttata 16699169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 22591326 - 22591279
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  22591326 aaaaccaaaagtgacctatattacaaggggtaaaggcctattaaccct 22591279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 24545506 - 24545455
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||| ||||||||| ||||||||||  |||||||||||||    
T  24545506 ggcaaaaccaaaagtgacctatattatagggggtaaaagcctattaaccctt 24545455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 24987662 - 24987607
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||  || || ||||||||||||||||||||||||||||||||||    
T  24987662 acaggggaaaaaccggaaatgacctatattacagggggtaaagacctattaaccct 24987607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 25235806 - 25235771
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||||||||||||||||||||||||||||    
T  25235806 cctatattacagggggtaaagacctattaacccttt 25235771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 25601924 - 25601975
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| ||||||||||||| |||||||| |||||||||||| |||||||||||    
T  25601924 gggggaaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccc 25601975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 44200373 - 44200326
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||||    
T  44200373 aaaaccaaaaatggcctatattacaaggggtaaagacctattaaccct 44200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 44311254 - 44311207
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  44311254 aaaagcaaaagtgtcctatattacagggggtaaaggcctattaaccct 44311207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 2059451 - 2059489
Alignment:
Q  178 cctatattacagggggtaaagacctattaacccttttat 216  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  2059451 cctatattacagggggtaaagacctattaatccttttat 2059489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 10027988 - 10028034
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| || || |||||||||||||||||||||||||||||||||    
T  10027988 aaaaccagaaatgacctatattacagggggtaaagacctattaaccc 10028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 13545609 - 13545575
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||||||||||||||||    
T  13545609 tatattacagggggtaaagacctattaaccctttt 13545575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 212
Target Start/End: Original strand, 18458827 - 18458861
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||||||    
T  18458827 cctatattacagggggtaaagacctattaaccctt 18458861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 50105407 - 50105457
Alignment:
Q  164 aaaaccaaaagtgccctatattacagg-gggtaaagacctattaacccttt 213  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  50105407 aaaatcaaaagtgacctatattacaggagggtaaagacctattaacccttt 50105457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 9439427 - 9439460
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  9439427 cctatattacagggggtaaagacctattaaccct 9439460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 13917228 - 13917327
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||| |||||||||||||||||||||||          |||||||  ||||||||||||| ||||||||||||||| ||||   ||||||||||    
T  13917228 gaagaatctttattttacaaggacggaatctaaaaataaaaattacaggggagaaaaccaaaagtgtcctatattacaggggataaaactctattaaccc 13917327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 20132434 - 20132381
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccc 210  Q
    |||| |||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  20132434 agggccaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccc 20132381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 25600982 - 25600929
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccct 211  Q
    |||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  25600982 gggggaaaaccaaaagtgacctatattgcagaggggtaaagacctattaaccct 25600929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 28724371 - 28724322
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||| || || ||||| ||||||||||||||||||||||||||||||    
T  28724371 aaaaccagaaatgacctattttacagggggtaaagacctattaacccttt 28724322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 30434326 - 30434277
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||| |||| || |||||||||||||||||||||||| |||||||||||    
T  30434326 aaaacaaaaaatgacctatattacagggggtaaagaccgattaacccttt 30434277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 2274619 - 2274720
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa--annnnnnnnnnacaggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||| |  |          |||||||||||||||||||| |||||||||| |||||  ||||||| |||||||    
T  2274619 gaagaatcttcattttacaaggacggaatcttagaaaaaaaaatttacaggggcaaaaccaaaagtaccctatattataggggaataaagacttattaac 2274718  T
Q  209 cc 210  Q
    ||    
T  2274719 cc 2274720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 2472609 - 2472645
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2472609 cctatattacagggggtaaagacctattaaccatttt 2472645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 4646803 - 4646755
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||| || | ||||||| |||||||||||||||||||||||||    
T  4646803 aaaaccaaaaatgacttatattagagggggtaaagacctattaaccctt 4646755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 8930304 - 8930406
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||| |||||||||||||| |||||||           ||||||| ||||||||||||| || ||||||||||||||||||   ||||||||||    
T  8930304 gaagaatctttattttacaaggacgaaatctaatttttttttttacaggggacaaaaccaaaagtaccttatattacagggggtaaaactctattaaccc 8930403  T
Q  211 ttt 213  Q
    |||    
T  8930404 ttt 8930406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 21853462 - 21853418
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaac 208  Q
    ||||||| || || |||||||||||||||||||||||||||||||    
T  21853462 aaaaccagaaatgacctatattacagggggtaaagacctattaac 21853418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 23321364 - 23321332
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||||||||||||    
T  23321364 gaagaatcttcattttacaaggacggaatctaa 23321332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 32130691 - 32130643
Alignment:
Q  164 aaaaccaaaagtgccctatattac-agggggtaaagacctattaaccct 211  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  32130691 aaaaccaaaagtgacctatattactagggggtaaaggcctattaaccct 32130643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 33936081 - 33936136
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||| |||||||| ||| ||||||||||||||||||||  |||||||||||||    
T  33936081 acaggggcgaaaccaaa-gtgacctatattacagggggtaaaatcctattaaccctt 33936136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 46136138 - 46136086
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||| ||||| |||| || ||||||||||||||||||||||| |||||||||    
T  46136138 agggggaaaacaaaaaatgacctatattacagggggtaaagacttattaaccc 46136086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 2472436 - 2472389
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| || || ||||||||||||||| ||||||||||||||||||    
T  2472436 aaaaccagaaatgacctatattacaggggttaaagacctattaaccct 2472389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 7112545 - 7112494
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| |||||| ||| || | |||||||||||||||||||||||||||||||    
T  7112545 ggggaaaaaccgaaaatgacatatattacagggggtaaagacctattaaccc 7112494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 27548964 - 27549014
Alignment:
Q  161 ggcaaaaccaaaagtgccctata--ttacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||||||||||    
T  27548964 ggcaaaaccaaaagtgcactatatattacagggggtaaaggcctattaacc 27549014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 31648122 - 31648075
Alignment:
Q  164 aaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccc 210  Q
    ||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  31648122 aaaaccaaaagtgacctatattacatgggggtaaaggcctattaaccc 31648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 33934736 - 33934635
Alignment:
Q  113 aagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccc 210  Q
    ||||||||| |||||||||||||| ||||||||          ||||||| ||||||||||||||  |||||||||||||| |||||  |||||||||||    
T  33934736 aagaatcttgattttacaaggacgaaatctaaaacttttttttacagggggcaaaaccaaaagtgatctatattacaggggcgtaaaaccctattaaccc 33934637  T
Q  211 tt 212  Q
    ||    
T  33934636 tt 33934635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 35168019 - 35168066
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||| || |||||||||||||||||||||  |||||||||||    
T  35168019 aaaaccaaaaatgacctatattacagggggtaaagcactattaaccct 35168066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 44312136 - 44312187
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||| || |||||||||||| |||||||||||| ||||| |||||    
T  44312136 ggggcaaaaccgaatgtgccctatatttcagggggtaaaggcctataaaccc 44312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 49201391 - 49201442
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||| ||||||||||||| |||||||| |||||||||||  |||||||||||    
T  49201391 gggggaaaaccaaaagtgacctatattgcagggggtaaaagcctattaaccc 49201442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 50104591 - 50104540
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||| ||||||||||||| ||||| |||||||| |||||| ||||||||||    
T  50104591 agggggaaaaccaaaagtgacctatgttacagggcgtaaaggcctattaacc 50104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 7780227 - 7780280
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||||||||||  |||||||||| ||||||||| | ||||||||||||    
T  7780227 ggggcaaaaccaaaagtgatctatattaca-ggggtaaaggcatattaacccttt 7780280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 16698900 - 16698866
Alignment:
Q  179 ctatattacagggggtaaagacctattaacccttt 213  Q
    ||||||||||| |||||||||||||||||||||||    
T  16698900 ctatattacagagggtaaagacctattaacccttt 16698866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 30659435 - 30659465
Alignment:
Q  180 tatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||    
T  30659435 tatattacagggggtaaagacctattaaccc 30659465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 37194495 - 37194549
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||| |||||||||| || |||||||||||||| ||||||  |||||||||||||    
T  37194495 ggggaaaaaccaaaaatgtcctatattacagggagtaaagttctattaacccttt 37194549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 42736824 - 42736878
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| ||||||  || || ||||||||||||||| |||||||||||||||||    
T  42736824 acagggggaaaaccggaaatgacctatattacaggggataaagacctattaaccc 42736878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 44754608 - 44754662
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctt 212  Q
    |||| ||||||||||||| |||||||| || |||||||||| |||||||||||||    
T  44754608 gggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccctt 44754662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 44826340 - 44826370
Alignment:
Q  182 tattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||||||||||||||||    
T  44826340 tattacagggggtaaagacctattaaccctt 44826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 1826440 - 1826493
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    ||||||||| |||||||| ||||||||||| ||||||||| || ||||||||||    
T  1826440 ggggcaaaatcaaaagtgacctatattacaggggggtaaaaacatattaaccct 1826493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 6077040 - 6077007
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||| ||||||||    
T  6077040 gaagaatcttcattttacaaggacgaaatctaaa 6077007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 209
Target Start/End: Original strand, 7112748 - 7112777
Alignment:
Q  180 tatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||    
T  7112748 tatattacagggggtaaagacctattaacc 7112777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 8928916 - 8928883
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||| ||||||||||||    
T  8928916 gaagaatcttcattttacaagaacggaatctaaa 8928883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 13916139 - 13916090
Alignment:
Q  164 aaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctt 212  Q
    ||||||||||||| | ||||||||| |||||||||| |||||||||||||    
T  13916139 aaaaccaaaagtgtcatatattacaagggggtaaagccctattaaccctt 13916090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 13916191 - 13916158
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  13916191 gaagaatctttattttacaaggacggaatctaaa 13916158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 15790483 - 15790536
Alignment:
Q  164 aaaaccaaaagtgccctatattacaggggg-taaagacctattaacccttttat 216  Q
    ||||||| || || |||||||||||||||| | |||||||||||||||||||||    
T  15790483 aaaaccagaaatgacctatattacaggggggtcaagacctattaacccttttat 15790536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 22604687 - 22604720
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||| ||||||||||||||||||    
T  22604687 cctatattacaggggttaaagacctattaaccct 22604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 28410946 - 28410913
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||| ||||||||||||||||||    
T  28410946 cctatattacaggggataaagacctattaaccct 28410913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 29075573 - 29075606
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaa 197  Q
    |||||||||| |||||||||||||||||||||||    
T  29075573 aaaaccaaaattgccctatattacagggggtaaa 29075606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 30536467 - 30536434
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  30536467 gaagaatctttattttacaaggacggaatctaaa 30536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 34933337 - 34933378
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaa 197  Q
    ||||||| ||||||||||||| |||||||| |||||||||||    
T  34933337 acagggggaaaaccaaaagtgacctatattgcagggggtaaa 34933378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 36343206 - 36343153
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccct 211  Q
    |||| ||||| |||| || ||||||||||||| |||||||||||||||||||||    
T  36343206 gggggaaaacaaaaaatgacctatattacaggagggtaaagacctattaaccct 36343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 37194446 - 37194479
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  37194446 gaagaatctttattttacaaggacggaatctaaa 37194479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 49200844 - 49200795
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaa 207  Q
    ||||| ||||||||||||| |||||||| |||||||||||  ||||||||    
T  49200844 agggggaaaaccaaaagtgacctatattgcagggggtaaaagcctattaa 49200795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 188
Target Start/End: Original strand, 51903484 - 51903513
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca 188  Q
    ||||||||||||||||||||||||||||||    
T  51903484 ggggcaaaaccaaaagtgccctatattaca 51903513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 5348195 - 5348163
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||| ||||||||||||||||||||    
T  5348195 cctatattacagagggtaaagacctattaaccc 5348163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 13509193 - 13509157
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||| |||||||||| |||||||||||    
T  13509193 cctatattacagggagtaaagacctgttaaccctttt 13509157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 24004115 - 24004075
Alignment:
Q  180 tatattacagggggtaaagacctattaacccttttatatat 220  Q
    |||||||||||||||||||  | ||||||||||||||||||    
T  24004115 tatattacagggggtaaagcaccattaacccttttatatat 24004075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 24730209 - 24730265
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctttt 214  Q
    |||| ||||||||||||| ||||||||||| ||||||||||  | ||||||||||||    
T  24730209 gggggaaaaccaaaagtgacctatattacaggggggtaaagcaccattaaccctttt 24730265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 27523843 - 27523799
Alignment:
Q  165 aaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||||||| |  |||||||| ||||||||||    
T  27523843 aaaccaaaagtgccctatattatacagggtaaagtcctattaacc 27523799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 28724557 - 28724589
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| |||||||||||||||||||||||||    
T  28724557 tatattagagggggtaaagacctattaaccctt 28724589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 35034320 - 35034352
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||||||| |||||||||||||||||    
T  35034320 cctatattacaggggataaagacctattaaccc 35034352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 39160488 - 39160432
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| |||||||||| || ||||||| |||||||||||||  | ||||||||||    
T  39160488 acagggggaaaaccaaaaatgacctatatgacagggggtaaagcaccattaaccctt 39160432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 50596183 - 50596215
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    ||||||||||| |||||||||||||||||||||    
T  50596183 cctatattacaaggggtaaagacctattaaccc 50596215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 52413175 - 52413119
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||  ||||||||| || |||||||||||||||||||||  | ||||||||||    
T  52413175 acaggggggaaaccaaaaatgacctatattacagggggtaaagcaccattaaccctt 52413119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 212
Target Start/End: Original strand, 12322760 - 12322862
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||||||||||||          ||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  12322760 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaattacagggggcaaaatcaaaagtgccctatattacaggggggtaaagacctattaacc 12322859  T
Q  210 ctt 212  Q
    |||    
T  12322860 ctt 12322862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 3063488 - 3063542
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3063488 aggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccctt 3063542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 56069 - 56170
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||||| |||||||||||||           ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  56069 gaagaatcttcattttacaacgacggaatctaaaaaaaaaaaattacaggggacaaaatcaaaagtgccctatattacagggggtaaagacctattaacc 56168  T
Q  210 ct 211  Q
    ||    
T  56169 ct 56170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 14328652 - 14328703
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14328652 ggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 14421662 - 14421713
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14421662 ggggcaaaaccaaaagtgacctatattacagggggtaaagacctattaaccc 14421713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 22058235 - 22058336
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  22058235 gaagaatcttcattttacaaggacggaatctaaaaaaaagaatttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 22058334  T
Q  209 cc 210  Q
    ||    
T  22058335 cc 22058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 24235636 - 24235690
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24235636 ggggcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccctt 24235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 24234430 - 24234327
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  24234430 gaagaatcttcattttacaaggacggaatctaaatttttttttttacagggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaac 24234331  T
Q  209 cctt 212  Q
    ||||    
T  24234330 cctt 24234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 22056583 - 22056482
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagggg-caaaaccaaaagtgccctatattacaggg-ggtaaagacctattaac 208  Q
    ||||||||||||||||||||||||||||||||||           ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  22056583 gaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaac 22056484  T
Q  209 cc 210  Q
    ||    
T  22056483 cc 22056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 34762282 - 34762181
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatcta-aannnnnnnnnnacaggg-gcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||||||||||||||||||||| |||||| ||          |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  34762282 gaagaatcttcattttacaaggacgaaatctataaaaaaaaatttacagggagcaaaaccaaaagtgccctatattacaggaggtaaagacctattagcc 34762183  T
Q  210 ct 211  Q
    ||    
T  34762182 ct 34762181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 12321663 - 12321560
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatcta-aannnnnnnnnnacagg-ggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaac 208  Q
    ||||||||||||||||||||||||| |||||| ||          ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  12321663 gaagaatcttcattttacaaggacgaaatctataaaaaaaaaattacaggaggcaaaaccaaaagtaccctatattacagggggataaagacctattaac 12321564  T
Q  209 cctt 212  Q
    ||||    
T  12321563 cctt 12321560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 33483747 - 33483686
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacaggg-ggtaaagacctattaacccttttatatat 220  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| | |||||||    
T  33483747 gggcaaaaccaaaagtgtcctatattacagggtggtaaagacctattaacccatatatatat 33483686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 29942446 - 29942502
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| ||||||| || || |||||||||||||||||||||||||||||||||||    
T  29942446 acagggggaaaaccagaaatgacctatattacagggggtaaagacctattaaccctt 29942502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 6000674 - 6000729
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||    
T  6000674 acagggggaaaaccaaaagtgctctatattacagggggtaaagctctattaaccct 6000729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 14327420 - 14327370
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  14327420 ggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14327370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 14420430 - 14420380
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  14420430 ggggcaaaaccaaaagtgacgtatattacagggggtaaaggcctattaacc 14420380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 16129539 - 16129490
Alignment:
Q  165 aaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  16129539 aaaccaaaagtgacatatattacagggggtaaagacttattaaccctttt 16129490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 31851809 - 31851752
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttttat 216  Q
    |||| |||||| ||| || ||||||||||||||| |||||||||||||||||||||||    
T  31851809 gggggaaaaccgaaaatgacctatattacaggggataaagacctattaacccttttat 31851752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 10344102 - 10344050
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||| ||||||| || || |||||||||||||||||||||||||||||||||    
T  10344102 agggggaaaaccagaaatgacctatattacagggggtaaagacctattaaccc 10344050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 22366229 - 22366277
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  22366229 aaaatcaaaagtgacctatattgcagggggtaaagacctattaaccctt 22366277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 3120337 - 3120392
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||  |||||||||||| |||||||| |||||||||||| ||||||||||||    
T  3120337 acaggggggaaaccaaaagtgacctatattgcagggggtaaaggcctattaaccct 3120392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 23270219 - 23270266
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  23270219 caaaatcaaaagtgacctatattaaagggggtaaagacctattaaccc 23270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 26644700 - 26644747
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  26644700 aaaaccaaaagtgacctatattacaaggggaaaagacctattaaccct 26644747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 26750666 - 26750713
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||    
T  26750666 aaaaccaaaagtgacctatattacaaggggaaaagacctattaaccct 26750713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 32614546 - 32614601
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccctt 212  Q
    ||||||||||||||||||| | ||||||||||||| |||||| |||||||||||||    
T  32614546 aggggcaaaaccaaaagtgacatatattacaggggtgtaaaggcctattaaccctt 32614601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 7922363 - 7922317
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||| || ||||||||||||||| |||||||||||||||||    
T  7922363 aaaaccaaaaatgacctatattacaggggataaagacctattaaccc 7922317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 13114444 - 13114398
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||| ||| || |||||||||||||||||||||||||||||||||    
T  13114444 aaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 13114398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 5999769 - 5999716
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||| |||||||||| |||||||||||| |||||||||||  |||||||||||    
T  5999769 agggggaaaaccaaaaatgccctatattagagggggtaaagctctattaaccct 5999716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 22573854 - 22573801
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||| ||||| |||| || ||||||||| ||||||||||||||||||||||||    
T  22573854 aggggaaaaacaaaaaatgacctatattatagggggtaaagacctattaaccct 22573801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 22574056 - 22574089
Alignment:
Q  179 ctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||||||||||||||||||||||||||||||    
T  22574056 ctatattacagggggtaaagacctattaaccctt 22574089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 24914539 - 24914506
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    ||||||||||||||||||||||||||||||||||    
T  24914539 gaagaatcttcattttacaaggacggaatctaaa 24914506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 29454717 - 29454779
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacag----ggggtaaagacctattaacccttttat 216  Q
    ||||| ||||||||||| | ||||||||||||    |||||||||||||||||||||||||||    
T  29454717 agggggaaaaccaaaagggacctatattacagtgcaggggtaaagacctattaacccttttat 29454779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 24062213 - 24062165
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    ||||||| || || ||||||||| |||||||||||||||||||||||||    
T  24062213 aaaaccagaaatgacctatattatagggggtaaagacctattaaccctt 24062165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 24387786 - 24387818
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  24387786 cctatattacagggggtaaagacctattaaccc 24387818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 30409675 - 30409727
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| ||||||||||||| |||||||| |||| ||||||| ||||||||||||    
T  30409675 gggggaaaaccaaaagtgacctatattgcaggaggtaaaggcctattaaccct 30409727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 54853 - 54807
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||    
T  54853 caaaaccaaaagtgtcctatattacaggagg-aaagacctattaaccc 54807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 3062241 - 3062194
Alignment:
Q  160 gggcaaaaccaaaagtgccctatattacag-ggggtaaagacctatta 206  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  3062241 gggcaaaaccaaaagtgacctatattacagaggggtaaaggcctatta 3062194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 22365888 - 22365833
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||||||||| ||||||||   |||||||||| ||||||||||||    
T  22365888 acagggggaaaaccaaaagtgacctatattgaggggggtaaaggcctattaaccct 22365833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 28583602 - 28583547
Alignment:
Q  156 acaggggcaaaa-ccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||| ||||||||||||||||||||| ||||||||   ||||||||||    
T  28583602 acaggggcaaaaaccaaaagtgccctatattacacggggtaaaacactattaaccc 28583547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 3593575 - 3593629
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||||| ||||| |||| || | |||||||||| ||||||||||||||||||||    
T  3593575 acaggggaaaaacaaaaaatgacatatattacagagggtaaagacctattaaccc 3593629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 11425779 - 11425829
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||| ||||||||||||||||||||||| ||||   ||||||||||||||    
T  11425779 aaaactaaaagtgccctatattacaggggataaaacactattaaccctttt 11425829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 18984010 - 18984064
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccctt 212  Q
    |||| ||||||||||||| |||||||| |||| |||||||| |||||||||||||    
T  18984010 gggggaaaaccaaaagtgacctatattgcaggagggtaaaggcctattaaccctt 18984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 24914490 - 24914440
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    ||||||||| |||||||| |||||||||||| ||||||| |||||||||||    
T  24914490 ggggcaaaatcaaaagtgtcctatattacaggggggtaatgacctattaac 24914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 419
Target Start/End: Original strand, 28647164 - 28647218
Alignment:
Q  365 ttgtaacattatggttgaccaatatcaccaattctatatcacccgaatgctaccc 419  Q
    |||||||||| |||||||||||| |||| |||||||| |||||| | ||||||||    
T  28647164 ttgtaacattgtggttgaccaatgtcacgaattctatgtcacccaagtgctaccc 28647218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 31851995 - 31852049
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaacc 209  Q
    ||||||| |||||| ||| || ||||||||||| |||||||||||||||||||||    
T  31851995 acagggggaaaaccgaaaatgacctatattacaggggggtaaagacctattaacc 31852049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 31886055 - 31886089
Alignment:
Q  180 tatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||||||| |||||||||||||||||||||    
T  31886055 tatattacaggggataaagacctattaaccctttt 31886089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 193
Target Start/End: Original strand, 33485081 - 33485115
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggggg 193  Q
    ||||||||||||||||| |||||||||||||||||    
T  33485081 ggggcaaaaccaaaagtaccctatattacaggggg 33485115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 33751925 - 33751983
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaacccttt 213  Q
    ||||||| |||| | ||| || |||||||||||| ||||||||||||||||||||||||    
T  33751925 acagggggaaaatcgaaaatgacctatattacagaggggtaaagacctattaacccttt 33751983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 18246176 - 18246143
Alignment:
Q  181 atattacagggggtaaagacctattaaccctttt 214  Q
    ||||||||| ||||||||||||||||||||||||    
T  18246176 atattacagagggtaaagacctattaaccctttt 18246143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 144
Target Start/End: Complemental strand, 54902 - 54874
Alignment:
Q  116 aatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||||||||    
T  54902 aatcttcattttacaaggacggaatctaa 54874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 6759105 - 6759073
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||| ||||||||||||||||||||||    
T  6759105 gaagaatctttattttacaaggacggaatctaa 6759073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 208
Target Start/End: Original strand, 13114652 - 13114680
Alignment:
Q  180 tatattacagggggtaaagacctattaac 208  Q
    |||||||||||||||||||||||||||||    
T  13114652 tatattacagggggtaaagacctattaac 13114680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 13357590 - 13357638
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctat 204  Q
    ||||||| |||||||||| || |||||||||| || |||||||||||||    
T  13357590 acaggggaaaaaccaaaaatgacctatattactggaggtaaagacctat 13357638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 13639541 - 13639509
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||| ||||||    
T  13639541 cctatattacagggggtaaagacctactaaccc 13639509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 17441447 - 17441400
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||| ||| || ||||||||||||||| |||||||||||||||||||    
T  17441447 aaaaccgaaaatgacctatattacagggg-taaagacctattaaccctt 17441400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 22362962 - 22362998
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||  ||||||||||||||    
T  22362962 cctatattacagggggtaaagcactattaaccctttt 22362998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 408
Target Start/End: Complemental strand, 28647128 - 28647088
Alignment:
Q  368 taacattatggttgaccaatatcaccaattctatatcaccc 408  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  28647128 taacattgtggttgaccaatgtcaccaattctatgtcaccc 28647088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 32614211 - 32614171
Alignment:
Q  171 aaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| |||||||||||| |||||||| ||||||||||||    
T  32614211 aaagtggcctatattacagagggtaaaggcctattaaccct 32614171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 10131 - 10076
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10131 ggggcaaaactaaaagtgccctatattacagggggtaaagacctattaaccctttt 10076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 11525 - 11558
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  11525 gaagaatctttattttacaaggacggaatctaaa 11558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Complemental strand, 10180 - 10148
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||| ||||||||    
T  10180 gaagaatcttcattttacaaggactgaatctaa 10148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 2783 - 2729
Alignment:
Q  161 ggcaaaaccaaaagtgccctatattacagggg-gtaaagacctattaaccctttt 214  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2783 ggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccctttt 2729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 3965 - 3912
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  3965 ggggcaaaaccaaaagtgtcctacattacagggggtaaagacctattaaccctt 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 4962 - 5017
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca--gggggtaaagacctattaaccctt 212  Q
    |||||||||||||||||| |||||||||||  |||||||||||| |||||||||||    
T  4962 ggggcaaaaccaaaagtgacctatattacagggggggtaaagacttattaaccctt 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 293 - 346
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  293 ggggcaaaaccaaaagtgccctatattacatgggggtaaagacctattaaccct 346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 8137 - 8081
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  8137 acaggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 8081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 15719 - 15663
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  15719 acaggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 15663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 25671 - 25615
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  25671 acaggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccct 25615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 4808 - 4706
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnn-acagg-ggcaaaaccaaaagtgccctatattacag-ggggtaaagacctattaac 208  Q
    |||||||||||||||||||||||||||||||||            ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  4808 gaagaatcttcattttacaaggacggaatctaattttttttttttacaggaggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaac 4709  T
Q  209 cct 211  Q
    |||    
T  4708 cct 4706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 5900 - 5953
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagg-gggtaaagacctattaaccc 210  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  5900 aggggcaaaaccaaaagtgccctatattacaggagtgtaaagacctattaaccc 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 64603 - 64503
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattacag-ggggtaaagacctattaacc 209  Q
    |||||||||| |||||||||||||| ||||||||          ||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  64603 gaagaatctttattttacaaggacgaaatctaaaaaaaaaaattacagggggcaaaaccaaaagtaccctatattacaggggggtaaagacctattaacc 64504  T
Q  210 c 210  Q
    |    
T  64503 c 64503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 66049 - 66102
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||    
T  66049 ggggcaaaaccaaaagtgtcatatattacaggggggtaaagacctattaaccct 66102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 65999 - 66031
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||||||||||||||||||||||||||    
T  65999 gaagaatcttcattttacaaggacggaatctaa 66031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 227421 - 227368
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacaggg-ggtaaagacctattaaccct 211  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  227421 ggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 228592 - 228645
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattaca--gggggtaaagacctattaaccc 210  Q
    |||||||||| ||||||| |||||||||||  ||||||||||||||||||||||    
T  228592 ggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 35650 - 35598
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  35650 ggggcaaaaccaaaagtgacctatattttagggggtaaagacctattaaccct 35598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 642 - 694
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||| ||||||| || || |||||||||||| |||||||||||||||||||||    
T  642 gggggaaaaccataaatgacctatattacagagggtaaagacctattaaccct 694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 36754 - 36803
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||||||||| || ||||||||| ||||||||||| ||||||||| ||||    
T  36754 aaaaccaaaaatgacctatattatagggggtaaaggcctattaactcttt 36803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 91104 - 91046
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    ||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||    
T  91104 acagggggaaaactagaaatgacctatattacagggggtaaagacctattaaccctttt 91046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 26360 - 26308
Alignment:
Q  158 aggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||| |||||| ||| || |||||||||||||||||||||||||||||||||    
T  26360 agggggaaaaccgaaaatgacctatattacagggggtaaagacctattaaccc 26308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 7913 - 7858
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| ||||||| || || | ||||||||||||||||||||||||||||||||    
T  7913 acagggggaaaaccagaaatgacatatattacagggggtaaagacctattaaccct 7858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 8106 - 8153
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||| || || |||||||||||| |||||||||||||||||||||    
T  8106 aaaaccagaaatgacctatattacagtgggtaaagacctattaaccct 8153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 4300 - 4246
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||| ||||||| || || |||||||||||||| |||||||||||||||||||||    
T  4300 gggggaaaaccataaatgacctatattacagggagtaaagacctattaacccttt 4246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 4439 - 4484
Alignment:
Q  165 aaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||    
T  4439 aaaccgaaaatgacctatattacagggggtaaagacctattaaccc 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 9966 - 9916
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctttt 214  Q
    |||||||||||| ||||||||||||||||||||||   |||||||||||||    
T  9966 aaaaccaaaagtaccctatattacagggggtaaagttttattaaccctttt 9916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 6865 - 6807
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaacccttt 213  Q
    ||||||| ||||||| || || |||||||||||||||| ||||||||||||||||||||    
T  6865 acagggggaaaaccataaatgacctatattacagggggataaagacctattaacccttt 6807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 4176 - 4209
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||||||||||||||||||||||||    
T  4176 cctatattacagggggtaaagacctattaaccct 4209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 3969 - 3913
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacaggggg-taaagacctattaaccct 211  Q
    ||||||| ||||||  || || |||||||||||||||| ||||||||||||||||||    
T  3969 acagggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 3913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 23784 - 23685
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaannnnnnnnnnacagggg-caaaaccaaaagtgccctatattaca-gggggtaaagacctattaacc 209  Q
    ||||||||||||||||| |||||| |||||||||          ||||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||    
T  23784 gaagaatcttcattttataaggacagaatctaaattttttttttacagggggcaaaatcaaaagtgtcttatattacatgggggtaaagacctattaacc 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 24943 - 24995
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattac-agggggtaaagacctattaaccc 210  Q
    ||||||||| ||||||| ||||||||||| |||||||||||  ||||||||||    
T  24943 ggggcaaaatcaaaagtaccctatattacaagggggtaaagctctattaaccc 24995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Complemental strand, 15919 - 15871
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    |||||| ||||||| | ||||||||||||| ||||||||||||||||||    
T  15919 caaaacaaaaagtgtcatatattacaggggataaagacctattaaccct 15871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 17465 - 17513
Alignment:
Q  163 caaaaccaaaagtgccctatattacagggggtaaagacctattaaccct 211  Q
    ||||||||||||| ||||||||||||| || ||| ||||||||||||||    
T  17465 caaaaccaaaagtaccctatattacagaggataatgacctattaaccct 17513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 15975 - 15947
Alignment:
Q  112 gaagaatcttcattttacaaggacggaat 140  Q
    |||||||||||||||||||||||||||||    
T  15975 gaagaatcttcattttacaaggacggaat 15947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 17412 - 17440
Alignment:
Q  112 gaagaatcttcattttacaaggacggaat 140  Q
    |||||||||||||||||||||||||||||    
T  17412 gaagaatcttcattttacaaggacggaat 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 34851 - 34883
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  34851 cctatattacagggggtaaagacctattaaccc 34883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 1859 - 1827
Alignment:
Q  178 cctatattacagggggtaaagacctattaaccc 210  Q
    |||||||||||||||||||||||||||||||||    
T  1859 cctatattacagggggtaaagacctattaaccc 1827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 2070 - 2120
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggg-gtaaagacctattaacccttt 213  Q
    ||||||| || || ||||||||||||||| |||||||||||||||||||||    
T  2070 aaaaccagaaatgacctatattacaggggggtaaagacctattaacccttt 2120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 2724 - 2775
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaaccc 210  Q
    |||||||| |||||||| |||||||||||||||||||||   ||||||||||    
T  2724 ggggcaaatccaaaagtaccctatattacagggggtaaaactctattaaccc 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 179 - 209
Target Start/End: Original strand, 4023 - 4053
Alignment:
Q  179 ctatattacagggggtaaagacctattaacc 209  Q
    |||||||||||||||||||||||||||||||    
T  4023 ctatattacagggggtaaagacctattaacc 4053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 1148 - 1202
Alignment:
Q  159 ggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacccttt 213  Q
    |||| ||||||| || || ||||||||||| ||| ||||||||||||||||||||    
T  1148 ggggaaaaaccagaaatgacctatattacaagggataaagacctattaacccttt 1202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 30825 - 30792
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  30825 gaagaatctttattttacaaggacggaatctaaa 30792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 144
Target Start/End: Original strand, 37348 - 37380
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaa 144  Q
    |||||||||| ||||||||||||||||||||||    
T  37348 gaagaatctttattttacaaggacggaatctaa 37380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 42945 - 42998
Alignment:
Q  156 acaggggcaaaaccaaaagtgccctatattacagggggtaaagacctattaacc 209  Q
    ||||||| ||||| |||||||   ||||||||||||||||||||| ||||||||    
T  42945 acagggggaaaactaaaagtgatttatattacagggggtaaagacttattaacc 42998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Original strand, 9004 - 9037
Alignment:
Q  112 gaagaatcttcattttacaaggacggaatctaaa 145  Q
    |||||||||| |||||||||||||||||||||||    
T  9004 gaagaatctttattttacaaggacggaatctaaa 9037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 110458 - 110406
Alignment:
Q  162 gcaaaaccaaaagtgccctatattacaggggg-taaagacctattaacccttt 213  Q
    ||||||||||||||| | |||||||||||||| ||||  ||||||||||||||    
T  110458 gcaaaaccaaaagtgacatatattacagggggataaatgcctattaacccttt 110406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 432441 - 432393
Alignment:
Q  164 aaaaccaaaagtgccctatattacagggggtaaagacctattaaccctt 212  Q
    |||||| ||| || |||||||||||||||||||||  ||||||||||||    
T  432441 aaaaccgaaaatgacctatattacagggggtaaagtactattaaccctt 432393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University