View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18783_high_5 (Length: 446)
Name: NF18783_high_5
Description: NF18783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18783_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 418; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 1 - 430
Target Start/End: Complemental strand, 6349833 - 6349404
Alignment:
| Q |
1 |
aggtatgaatgtaaacacagaacccctttgaacaagggatttctcatgttcatggtctttatactttacctattaatatgttaatttttctgcaacaaaa |
100 |
Q |
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| T |
6349833 |
aggtatgaatgtaaacacagaacccctttgaacaagggatttctcatgttcatggtctttatactttacctattaatatgttaatctttctgcaacaaaa |
6349734 |
T |
|
| Q |
101 |
cttgccaccacaaaatctcatgttttccgtcgactccaaaatgaaacttgttgcggcctcattgtgatgaatatgttagacattatagaatgaactataa |
200 |
Q |
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| T |
6349733 |
cttgccaccacaaaatctcatgttttccgtcgactccaaaatgaaacttgttgcggcctcattgtgatgaatatgttagacattatagaatgaactataa |
6349634 |
T |
|
| Q |
201 |
caaaccaacacgggttgatgaccaaagattggttagcaaaccaattgacatttcccaaaaggggaagtcaaagaaactcaacaaatatgccaccaaagtt |
300 |
Q |
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| T |
6349633 |
caaaccaacacgggttgatgaccaaagattggttagcaaaccaattgacatttcccaaaaggggaagtcaaagaaacacaacaaatatgccaccaaagtt |
6349534 |
T |
|
| Q |
301 |
aagagtattattagaggactggaaaaccataagtcaatgtgacaatgtcatgactaatttgtggatgcacaatacagctagaagtacaattccaagagaa |
400 |
Q |
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| T |
6349533 |
aagagtattattagaggactggaaagccataagtcaatgtgacaatgtcatgactaatttgtggatgcacaatacagctagaagtacaattccaagagaa |
6349434 |
T |
|
| Q |
401 |
aatgggaagaggttttgtgaatcaaaattc |
430 |
Q |
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| T |
6349433 |
aatgggaagaggttttgtgaatcaaaattc |
6349404 |
T |
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