View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18784_high_13 (Length: 237)
Name: NF18784_high_13
Description: NF18784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18784_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 10843629 - 10843851
Alignment:
| Q |
1 |
caaaagcagttggaaaatttactcttcttcctagctttttgactagactagat-agcatatacttgtgccaataagaatgcctttgatttggaaatcaca |
99 |
Q |
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| T |
10843629 |
caaaagcagttggaaaatttactcttcttcctagctttttgactagactagattagcatatacttgtgccaataagaatgcctttgatttggaaatcaca |
10843728 |
T |
|
| Q |
100 |
tggaatagcttcaacttgaagaaatgagcaattttcatgctaaaccatgttacaaatcattttttctttgcttaaattcttataagcttacttaagctga |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10843729 |
tggaatagcttcaacttgaagaaatgagcaattttcatgctaaaccatgttacaaatcattttttctttgcttaaattcttataagcttacttaagctga |
10843828 |
T |
|
| Q |
200 |
aatggttaactccggtcgaaagt |
222 |
Q |
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||||||||||||||||||||||| |
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| T |
10843829 |
aatggttaactccggtcgaaagt |
10843851 |
T |
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