View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18784_low_1 (Length: 660)
Name: NF18784_low_1
Description: NF18784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18784_low_1 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 600; Significance: 0; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 600; E-Value: 0
Query Start/End: Original strand, 1 - 645
Target Start/End: Complemental strand, 31189758 - 31189114
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31189758 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
31189659 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
31189658 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccaaaaaaagagagcattatttcga |
31189559 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31189558 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
31189459 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31189458 |
gatgttgctggaaatggttggtgggaggaaaaacattattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
31189359 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31189358 |
cttggcactaatctgagacctgatggggttatggatacagaagaagacgagattgcaaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
31189259 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31189258 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
31189159 |
T |
|
| Q |
601 |
gtcaatatcagagtcttctaagtcttaatatttgagggtaagtat |
645 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31189158 |
gtcaatatcagagtcttttaagtcttaatatttgagggtaagtat |
31189114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 519; E-Value: 0
Query Start/End: Original strand, 1 - 628
Target Start/End: Complemental strand, 31145700 - 31145073
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
31145700 |
atctttgagttgggagaatttgtatcaaattgcaaaagggatagctcgtgggctagagtacttgcatagaggatgtaccactcgaattttacattttgac |
31145601 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
31145600 |
ataaaaccacataacattcttttagatgaaaacttatgtccaaagatttcagattttggacttgcaaaactctgtccaaaacaagagagcattatttcaa |
31145501 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31145500 |
tgtcagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
31145401 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31145400 |
gatgttgctagaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
31145301 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31145300 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagattgcaaggagaatgactattgtgggtttatggtgcattcaaacatttc |
31145201 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| | |||||||| |||||||| |
|
|
| T |
31145200 |
caagtgatagacctacaatgagtaaagttattgaaatgttagaagttaacatgaattcacttgaaataccacccaaaccgttgctttcttctcctactag |
31145101 |
T |
|
| Q |
601 |
gtcaatatcagagtcttctaagtcttaa |
628 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
31145100 |
gtcaatatcagagtcttctaagtcttaa |
31145073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 504; E-Value: 0
Query Start/End: Original strand, 1 - 645
Target Start/End: Complemental strand, 31201565 - 31200921
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31201565 |
atctttgagttgggataatttgtatcaaattgcaaaaggaatagctcgtggactagagtacttgcatagaggatgtaccactcgaattttacatttcgac |
31201466 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
31201465 |
ataaaaccacataatattcttttagatgagaatttttgtccaaagatttcagattttggacttgcaaaactttgtccaaggaacgagagcattatttcga |
31201366 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||| |
|
|
| T |
31201365 |
tgtcagatcaaagagggactatgggatatgtagctccagaaatgtggaatagacattttggaggagtttcatacaagtccgatgtttatagttatggaat |
31201266 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||||||||| || ||||||||||||||||| ||| |
|
|
| T |
31201265 |
gatgttgctggaaatggttggagggaggaaaaacattaatgctgatgcaagtctcacaagtgagatatactttcctcactgggtatacaataggcttgag |
31201166 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
||||| | |||| ||||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31201165 |
cttggtagtaatttgagacctgatggagttatggatacagaagaagacaagattgcaaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
31201066 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31201065 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
31200966 |
T |
|
| Q |
601 |
gtcaatatcagagtcttctaagtcttaatatttgagggtaagtat |
645 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31200965 |
gtcaatatcagagtcttttaagtcttaatatttgagggtaagtat |
31200921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 1 - 619
Target Start/End: Complemental strand, 31172013 - 31171395
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
31172013 |
atctttgagttgggagaatttgtatcaaattgcaaaagggatagctcgtgggctagagtacttgcatagaggatgtaccactcgaattttacattttgac |
31171914 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
31171913 |
ataaaaccacataacattcttttagatgaaaacttatgtccaaagatttcagattttggacttgcaaaactctgtccaaaacaagagagcattatttcaa |
31171814 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31171813 |
tgtcagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
31171714 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31171713 |
gatgttgctagaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
31171614 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
31171613 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagattgcaaggagaatgactattgtgggtttatggtgcattcaaacatttc |
31171514 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||| ||||||| | ||| || || ||||| |
|
|
| T |
31171513 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttacaatgaattcactggaaatgccaccaaaaccattacattcatctcccactag |
31171414 |
T |
|
| Q |
601 |
gtcaatatcagagtcttct |
619 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
31171413 |
atcagtatcagagtcttct |
31171395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 1 - 640
Target Start/End: Original strand, 31224391 - 31225030
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
|||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| |
|
|
| T |
31224391 |
atctttgagttgggataaattgtataaaattgcaaaagggatagctcgtggactagagtacttgcatggaggatgtaccactagaattttacattttgac |
31224490 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||| |||| || |||||| |||| | |
|
|
| T |
31224491 |
ataaaaccacacaacatccttttagatgataatttatgtccgaagatttcagattttggacttgcaaaactatgtctcaggaaagaaagcattgtttcaa |
31224590 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
31224591 |
tgtcagatcaaagaggaacaatggggtatgtagctccagaagtgtggaatagacattttggaggagtttcacacaagtctgatgtttatagttatggaat |
31224690 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||||||||| ||||| |||||||||||||| ||||| ||| |
|
|
| T |
31224691 |
gatattgctggaaatggttggagggaggaaaaacattaatgctgatgcaagtcgcacaagtgagatatattttcctcattgggtatacaaaaggcttgag |
31224790 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
|||| | | || | ||||||||||| | |||||||||||||||||| |||| || ||||||||||| ||||| ||||| ||||| |||||||| |||| |
|
|
| T |
31224791 |
cttgctagtgattttagacctgatggaataatggatacagaagaagataagattgcaaggagaatgaccattgtaggtttgtggtgtattcaaacgtttc |
31224890 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
| | |||||| |||||||||||||||||||||||||||||||| |||| |||||||| | ||||| ||||| ||||||| |||||||| || ||||| |
|
|
| T |
31224891 |
ctaatgataggcctacaatgagtaaagtgattgaaatgttagatgttagcatgaattcgttggaaatgccaccaaaaccattgctttcttctccgactag |
31224990 |
T |
|
| Q |
601 |
gtcaatatcagagtcttctaagtcttaatatttgagggta |
640 |
Q |
| |
|
|| ||||||||||||| | ||| ||| || |||||||| |
|
|
| T |
31224991 |
atctgtatcagagtcttccacgtcctaaaatctgagggta |
31225030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 617
Target Start/End: Original strand, 30992368 - 30992984
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
|||||| |||||||||||| || |||||||||| ||||||||||||||||| ||||| || ||||||||||||||| |||| ||||||||||||| ||| |
|
|
| T |
30992368 |
atctttaagttgggataatatgcatcaaattgcgaaagggatagcccgtgggctagaatatttgcatagaggatgtgccactcgaattttacattttgac |
30992467 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| || || | || |||||| |||||| |
|
|
| T |
30992468 |
ataaaaccacataacattcttttagatgagaatttttgtccaaagatctcagattttggactggcaaagctttgcctgaagaaagacagcattgtttcga |
30992567 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30992568 |
tgtcggatcaaagagggacaatggggtatgtagctccagaagtgtggaatagacattttggaggagtttcacacaagtctgatgtttatagttatggaat |
30992667 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||||||| | |||||||| || || ||||||| || | ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
30992668 |
gatgttgttagaaatggtgggtggacggaaaaatattaatgcggatgcaagtcacacaagtgagatatactttcctcattgggtatacaataggcttgaa |
30992767 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
||||| | | || |||||||||||||||| |||||||| |||||||||||||| || | ||| ||||| |||||| |||| ||||| ||||||||||||| |
|
|
| T |
30992768 |
cttggtagttatttgagacctgatggggtaatggatacggaagaagatgagattgcaaagaggatgaccattgtgagtttgtggtgtattcaaacatttc |
30992867 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
| | || |||||||||||||||||||| ||||||||||||||||| |||| |||| | ||||||||||| ||||||| ||||| || |||||||| |
|
|
| T |
30992868 |
ctaatggcagacctacaatgagtaaagtagttgaaatgttagaagttgacattaattcgttggaaataccaccaaaaccattgctttcgtctcctactag |
30992967 |
T |
|
| Q |
601 |
gtcaatatcagagtctt |
617 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
30992968 |
atcagtatcagagtctt |
30992984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 617
Target Start/End: Original strand, 30960886 - 30961502
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
|||||| ||||||||| || || |||||||||| ||||||||||||||||| ||||| || ||||||||||||||| | || ||||||||||||| ||| |
|
|
| T |
30960886 |
atctttaagttgggatgatatgcatcaaattgcgaaagggatagcccgtgggctagaatatttgcatagaggatgtgctactcgaattttacattttgac |
30960985 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||| ||||| || || | || |||||| |||||| |
|
|
| T |
30960986 |
ataaaaccacataacattcttttagatgagaatttttgtccaaagatctcagattttggactggcaaagctttgcctgaagaaagacagcattgtttcga |
30961085 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30961086 |
tgtcggatcaaagagggacaatggggtatgtagctcctgaagtgtggaatagacattttggaggagtttcacacaagtctgatgtttatagttatggaat |
30961185 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||||||| | |||||||| || || ||||||| || | ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
30961186 |
gatgttgttagaaatggtgggtggacggaaaaatattaatgcggatgcaagtcacacaagtgagatatactttcctcattgggtatacaataggcttgaa |
30961285 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
||||| | | || |||||||||||||||| | |||||||||||| ||||||| || | ||||||||| ||||||||||| ||||| ||||||||||||| |
|
|
| T |
30961286 |
cttggtagtgatttgagacctgatggggtaactgatacagaagaaaatgagattgcaaagagaatgaccattgtgggtttgtggtgtattcaaacatttc |
30961385 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
| | || || ||||||||||||||||| ||||||||||||||||||||||||||| | | ||||||||||| ||||||| ||||| || |||||||| |
|
|
| T |
30961386 |
ctaatggcaggcctacaatgagtaaagtagttgaaatgttagaagttaacatgaattcattggaaataccaccaaaaccattgctttcgtctcctactag |
30961485 |
T |
|
| Q |
601 |
gtcaatatcagagtctt |
617 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
30961486 |
atcattatcagagtctt |
30961502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 600
Target Start/End: Original strand, 31229671 - 31230270
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
|||| |||||||||| | | | ||||||||||| ||||||||||| || || || ||||||||||||| ||||||| ||| |||| |||||||| ||| |
|
|
| T |
31229671 |
atctctgagttgggacattctttatcaaattgcgaaagggatagctcgagggcttgagtacttgcataagggatgtagcacttgaatcttacattttgac |
31229770 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
|| |||||||||||||| || ||| |||||||||| |||||||| || ||||||||||||||| ||| ||| || | |||||||||||||| | |
|
|
| T |
31229771 |
atcaaaccacataacatcctcttatatgagaatttttgtccaaagatatcagattttggactttcaagactttgccataagaaagagagcattatttcta |
31229870 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| |||| |||||||||||||| ||||||||||| || | ||||||| | |||||||| ||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
31229871 |
tgtcagacgctagagggacaatggggtatgtagctcctgagttatggaatataaattttggatgagtttcgcacaagtctgacgtttatagttatggaat |
31229970 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| | || ||||||||||| || ||||||||||||||||| |||||||||||||| | || || |
|
|
| T |
31229971 |
gatgttgctagaaatggttggtgggaggaaaaacattaacgccgatgcaagtcaaacaagtgagatatactttcctcattgggtatacaagaatcttgat |
31230070 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
|| ||| | || ||||||| || | || || | | ||||||||||| || || |||||| |||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
31230071 |
ctacgcaatgatttgagaccggacgaagtgattgtctcggaagaagatgaaattgcaaggagattgaccattgtaggtttatggtgcattcaaacatttc |
31230170 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
||| ||||||||| |||||||||| |||||||||||||||||||| |||| ||||| | ||||||||||| ||||| ||||||||| |||||||| |
|
|
| T |
31230171 |
caaatgatagaccaacaatgagtagagtgattgaaatgttagaaggcaacaagaattgtttggaaataccaccaaaacctattctttcttctcctactag |
31230270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 1 - 600
Target Start/End: Original strand, 30955141 - 30955737
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||||| || || | ||||| |||||||| ||||||| || | ||||||||||| || |
|
|
| T |
30955141 |
atctttgagttgggataatttctatcaaattgccaaagggatagctcgaggtttggagtatttgcataggggatgtaatacccggattttacattttgat |
30955240 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| ||| | | |
|
|
| T |
30955241 |
ataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcgagaaagagagcactatattca |
30955340 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| || || |||||| ||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30955341 |
tgtcaaatgcaagaggaacagtcggatatgtagctccagaagtatggaatagacaatttggaggagtttcacacaagtctgatgtttatagttatggaat |
30955440 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
|||| | | || |||||||||| ||| || || || || | || ||| ||| ||||| ||| || |||||| ||||| ||||||||| |||||| |
|
|
| T |
30955441 |
gatgcttttagagatggttggagtgagaaacaatattgatgttaatacaaatcaaactagcgag---tattttccagattggatatacaataagctagaa |
30955537 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
| | | || |||||||||| || |||| | |||||| ||||||| || | ||||||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
30955538 |
aaggagagtgatttgagacctgacatagtgatggccattgaagaaaatgagattgcaaaaggaatgaccattgttggtttatggtgcattcaaacattgc |
30955637 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttacttgaaataccacctaaaccatatctttcttcacctactag |
600 |
Q |
| |
|
||| |||| |||| |||||||||| ||||||||||||||| |||| || ||||||| | |||||||||||||| ||||| | ||||||| |||||||| |
|
|
| T |
30955638 |
caaatgatcgaccaacaatgagtagagtgattgaaatgttggaaggtagcatgaatgtccttgaaataccaccaaaacctttggtttcttctcctactag |
30955737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 545
Target Start/End: Original strand, 31214122 - 31214663
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
|||| |||||||||| | | | ||| ||||||| ||||||||||| || || | |||||| ||||||||||||| | || ||||||||||||| || |
|
|
| T |
31214122 |
atctctgagttgggagattctttatgaaattgctaaagggatagctcgagggttggagtacctgcatagaggatgcagtactcgaattttacattttgat |
31214221 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
|||||||||||||| ||| | |||||||| ||||| |||||||| || ||||||||||||||||||| ||| |||| || ||||||||||||| |
|
|
| T |
31214222 |
ataaaaccacataatattttattagatgaaaatttttgtccaaagatatcagattttggacttgcaagactttgtctcaagaaagaaagcattatttcga |
31214321 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| ||| | ||||| || ||||||||||||||||| || ||||||||||| | |||||||| ||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
31214322 |
tgtcaggtgctagaggaacgatgggatatgtagctcctgagttgtggaatagaaactttggaggcgtttcgtacaagtctgatgtttatagttacggaat |
31214421 |
T |
|
| Q |
301 |
gatgttgctggaaatggttggagggaggaaaaacatcattgctgatgcaagtcacactagtgagatatactttccacattgggtatacaataggctagag |
400 |
Q |
| |
|
||||||| ||||||| | ||||| ||||||||||| | ||| |||||||||| || ||||||| ||||||||| ||||||||||||| ||| | || |
|
|
| T |
31214422 |
gatgttgttggaaataatcggaggaaggaaaaacattagtgccaatgcaagtcatacaagtgagaaatactttcctgattgggtatacaaaaggtttgat |
31214521 |
T |
|
| Q |
401 |
cttggcactaatctgagacctgatggggttatggatacagaagaagatgagatcgcgaggagaatgacaattgtgggtttatggtgcattcaaacatttc |
500 |
Q |
| |
|
|| | |||| || |||||| |||| || || | || ||| ||||| ||||| | ||||||||| || || || |||||||||||||||||| ||| |
|
|
| T |
31214522 |
ctagacactgatttgagacacgatgaagtgattgccac---agatgatgacatcgcaaagagaatgaccatagtaggattatggtgcattcaaacacttc |
31214618 |
T |
|
| Q |
501 |
caagtgatagacctacaatgagtaaagtgattgaaatgttagaag |
545 |
Q |
| |
|
||| |||||||||| ||||||||| ||| |||||||||||||||| |
|
|
| T |
31214619 |
caaatgatagacctgcaatgagtagagttattgaaatgttagaag |
31214663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 30944881 - 30945184
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgac |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||| || | | ||||| |||||||| || |||| | | ||||||||||| ||| |
|
|
| T |
30944881 |
atctttaagttgggataatttgtatcaaattgccaaagggatagctcgaagtttggagtatttgcatagggggtgtaatatccggattttacattttgac |
30944980 |
T |
|
| Q |
101 |
ataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcga |
200 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| ||||| | |
|
|
| T |
30944981 |
ataaaaccgcataacattcttttagatgaaaatttatgtccaaagatttcagattttggacttgcaaagctctgtctcaagaaagagagcactattttca |
30945080 |
T |
|
| Q |
201 |
tgacagatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaat |
300 |
Q |
| |
|
|| || || |||||| ||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30945081 |
tgtcaaatgcaagaggaacagtcggatatgtagctccagaagtatggaatagacaatttggaggagtttcacacaagtctgatgtttatagttatggaat |
30945180 |
T |
|
| Q |
301 |
gatg |
304 |
Q |
| |
|
|||| |
|
|
| T |
30945181 |
gatg |
30945184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 462 - 579
Target Start/End: Original strand, 30945339 - 30945456
Alignment:
| Q |
462 |
gaatgacaattgtgggtttatggtgcattcaaacatttccaagtgatagacctacaatgagtaaagtgattgaaatgttagaagttaacatgaatttact |
561 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||||||| |||| |||| |||| |||||||||| ||||||||||||||| |||| || ||||||| | || |
|
|
| T |
30945339 |
gaatgactattgttggtttatggtgcattcaaacattgccaaatgatcgaccaacaatgagtagagtgattgaaatgttggaaggtagcatgaatatcct |
30945438 |
T |
|
| Q |
562 |
tgaaataccacctaaacc |
579 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
30945439 |
tgaaataccaccaaaacc |
30945456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30986204 - 30986279
Alignment:
| Q |
1 |
atctttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgt |
76 |
Q |
| |
|
|||||| |||||||||||| || |||||||||| ||||||||||||||||| ||||| || ||||||||||||||| |
|
|
| T |
30986204 |
atctttaagttgggataatatgcatcaaattgcgaaagggatagcccgtgggctagaatatttgcatagaggatgt |
30986279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 330
Target Start/End: Original strand, 44035561 - 44035886
Alignment:
| Q |
5 |
ttgagttgggataatttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgacataa |
104 |
Q |
| |
|
||||||||||| ||||| | || ||||||| ||||||||| || ||||||||||||||||||| ||| || | ||| || ||||| ||||||||||| | |
|
|
| T |
44035561 |
ttgagttgggagaatttacaccagattgcaatagggatagctcgaggactagagtacttgcataaagggtgcaacactaggatttttcatttcgacatta |
44035660 |
T |
|
| Q |
105 |
aaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccnnnnnnngagagcattatttcgatgac |
204 |
Q |
| |
|
||||||||||||||||||| || || | || |||| || || || |||||||||||||| ||||| | | |||||||||||||| ||| | |
|
|
| T |
44035661 |
aaccacataacattcttttggacgaaacttaccgtcccaagatatctgattttggacttgctaaactaagcacaagcaatgagagcattatttcaatgtc |
44035760 |
T |
|
| Q |
205 |
agatcaaagagggacaatgggatatgtagctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaatgatg |
304 |
Q |
| |
|
| | |||||||| | || ||||| ||||| ||||| | || | | ||| || || |||||||| || |||||||| |||||||| ||||||||| |
|
|
| T |
44035761 |
aaacgctagagggactgttgggtatgttgctcctgaagttttcaacaaaagtttcgggggcgtttcacataagtctgatgtctatagttacggaatgatg |
44035860 |
T |
|
| Q |
305 |
ttgctggaaatggttggagggaggaa |
330 |
Q |
| |
|
||||| ||||||||||| ||| |||| |
|
|
| T |
44035861 |
ttgctagaaatggttggtgggcggaa |
44035886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 540
Target Start/End: Original strand, 44036041 - 44036105
Alignment:
| Q |
476 |
ggtttatggtgcattcaaacatttccaagtgatagacctacaatgagtaaagtgattgaaatgtt |
540 |
Q |
| |
|
||||| ||||||||||||||| |||| | | ||||||||||||| |||||||||||||| ||||| |
|
|
| T |
44036041 |
ggtttgtggtgcattcaaacaattcctactcatagacctacaataagtaaagtgattgatatgtt |
44036105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 17)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 49710692 - 49710811
Alignment:
| Q |
47 |
cgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatga-gaatttatgtccaaaa |
145 |
Q |
| |
|
|||||||||||||||||||| ||||| || | ||| ||||| || ||||| ||||||||||| ||||| || | ||||||| ||||| ||||||||| |
|
|
| T |
49710692 |
cgtggactagagtacttgcacagaggctgcaacactagaatcttgcattttgacataaaacctcataatatattactagatgattaatttttgtccaaaa |
49710791 |
T |
|
| Q |
146 |
atttcagattttggacttgc |
165 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
49710792 |
atttcagattttggacttgc |
49710811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 83 - 169
Target Start/End: Original strand, 49725145 - 49725231
Alignment:
| Q |
83 |
agaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaa |
169 |
Q |
| |
|
|||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| || | |||||| |||||||||||||||||| |
|
|
| T |
49725145 |
agaattttgcattttgacataaaacctcataacattcttttggatgagaatttcaaccccagaatttcggattttggacttgcaaaa |
49725231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 49215355 - 49215473
Alignment:
| Q |
47 |
cgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaa |
146 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||| ||| ||||| || ||||| ||||||| ||| ||||| || | ||| ||| |||| ||||| |||| |
|
|
| T |
49215355 |
cgtggattagagtacttgcacagaggctgtaacactagaatcttgcattttgacataagacctcataatatattactagctgatgatttttgtccgaaaa |
49215454 |
T |
|
| Q |
147 |
tttcagattttggacttgc |
165 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
49215455 |
tttcagattttggacttgc |
49215473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 49687989 - 49688107
Alignment:
| Q |
47 |
cgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaa |
146 |
Q |
| |
|
|||||||||||||| || | |||||| || | ||| ||||| |||||||| ||||||||||| ||||| || | | ||||||||||| || ||||||| |
|
|
| T |
49687989 |
cgtggactagagtattttcgtagaggctgcaacactagaatcttacattttgacataaaacctcataatatattacttgatgagaatttctgcccaaaaa |
49688088 |
T |
|
| Q |
147 |
tttcagattttggacttgc |
165 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
49688089 |
attctgattttggacttgc |
49688107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 49683090 - 49683201
Alignment:
| Q |
54 |
tagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcaga |
153 |
Q |
| |
|
|||||||| |||| ||||| || | ||| ||||| |||||||| ||||||||||| ||||| || | | || || |||| ||||||||||||||||| |
|
|
| T |
49683090 |
tagagtacatgcacagaggctgcaacactagaatcttacattttgacataaaacctcataatatattacttgacgatgatttgtgtccaaaaatttcaga |
49683189 |
T |
|
| Q |
154 |
ttttggacttgc |
165 |
Q |
| |
|
|||||||||||| |
|
|
| T |
49683190 |
ttttggacttgc |
49683201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 49714341 - 49714452
Alignment:
| Q |
54 |
tagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcaga |
153 |
Q |
| |
|
||||||||||||| ||||| |||| ||| ||||| |||||||| ||||| ||||| ||||| || | | ||||| |||| ||||| ||||||||||| |
|
|
| T |
49714341 |
tagagtacttgcacagaggctgtaacactagaatcttacattttgacattaaacctcataatatattacttgatgaagatttctgtcctaaaatttcaga |
49714440 |
T |
|
| Q |
154 |
ttttggacttgc |
165 |
Q |
| |
|
||| |||||||| |
|
|
| T |
49714441 |
tttcggacttgc |
49714452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 10906998 - 10907039
Alignment:
| Q |
273 |
acaaatctgatgtttatagttatggaatgatgttgctggaaa |
314 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
10906998 |
acaaatcagatgtttatagttatggaatgatgttgcttgaaa |
10907039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 10930881 - 10930922
Alignment:
| Q |
273 |
acaaatctgatgtttatagttatggaatgatgttgctggaaa |
314 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
10930881 |
acaaatcagatgtttatagttatggaatgatgttgcttgaaa |
10930922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 10993085 - 10993126
Alignment:
| Q |
273 |
acaaatctgatgtttatagttatggaatgatgttgctggaaa |
314 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
10993085 |
acaaatcagatgtttatagttatggaatgatgttgcttgaaa |
10993126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 49215559 - 49215612
Alignment:
| Q |
251 |
agacattttggaggagtttcacacaaatctgatgtttatagttatggaatgatg |
304 |
Q |
| |
|
||||||||||| || || ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
49215559 |
agacattttggtggggtgtcacataaatcagatgtttatagttatggaatgatg |
49215612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 11041245 - 11041285
Alignment:
| Q |
274 |
caaatctgatgtttatagttatggaatgatgttgctggaaa |
314 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
11041245 |
caaatcggatgtttatagttatggaatgatgttgcttgaaa |
11041285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 49683286 - 49683357
Alignment:
| Q |
250 |
tagacattttggaggagtttcacacaaatctgatgtttatagttatggaatgatgttgctggaaatggttgg |
321 |
Q |
| |
|
|||||||||||| || || ||||||||||| ||||| || ||||||||||||||| | | ||||||||||| |
|
|
| T |
49683286 |
tagacattttggtggggtgtcacacaaatcagatgtctacagttatggaatgatggttttagaaatggttgg |
49683357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 49725317 - 49725400
Alignment:
| Q |
255 |
attttggaggagtttcacacaaatctgatgtttatagttatggaatgatgttgctggaaatggttggagggaggaaaaacatca |
338 |
Q |
| |
|
||||||| | ||| ||||| || || |||||||| ||||||||||||||| | ||||||||||||| |||| |||||||||| |
|
|
| T |
49725317 |
attttggtgcagtgtcacataagtcagatgtttacagttatggaatgatggtcatggaaatggttgggaggagaaaaaacatca |
49725400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 304
Target Start/End: Original strand, 49728717 - 49728788
Alignment:
| Q |
233 |
gctccagaagtgtggaatagacattttggaggagtttcacacaaatctgatgtttatagttatggaatgatg |
304 |
Q |
| |
|
||||||||||||| |||| ||||||| || || || |||||||||||||| |||||||||||||||||| |
|
|
| T |
49728717 |
gctccagaagtgttctctagaaattttggtggcgtctctcacaaatctgatgtatatagttatggaatgatg |
49728788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 9125151 - 9125105
Alignment:
| Q |
278 |
tctgatgtttatagttatggaatgatgttgctggaaatggttggagg |
324 |
Q |
| |
|
|||||| ||||||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
9125151 |
tctgatatttatagttatgggatgttgttgctggaattggttggagg |
9125105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 11026541 - 11026582
Alignment:
| Q |
273 |
acaaatctgatgtttatagttatggaatgatgttgctggaaa |
314 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||| |||| |
|
|
| T |
11026541 |
acaaatcagatgtttacagttatggaatgatgttgcttgaaa |
11026582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 269 - 321
Target Start/End: Original strand, 49714555 - 49714607
Alignment:
| Q |
269 |
tcacacaaatctgatgtttatagttatggaatgatgttgctggaaatggttgg |
321 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||| | | ||||||||||| |
|
|
| T |
49714555 |
tcacataaatcagatgtttatagttatggaatgatggttttagaaatggttgg |
49714607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 31618566 - 31618457
Alignment:
| Q |
53 |
ctagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcag |
152 |
Q |
| |
|
||||||||||||||| |||||||| |||| ||| ||||| | || |||||||| || ||||||||||| ||||| |||| ||||||||||| |||| |
|
|
| T |
31618566 |
ctagagtacttgcatcaaggatgtagttcaaggattctacatcttgatataaaacctcaaaacattcttttggatgaagatttttgtccaaaaatctcag |
31618467 |
T |
|
| Q |
153 |
attttggact |
162 |
Q |
| |
|
|||||||||| |
|
|
| T |
31618466 |
attttggact |
31618457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 31541351 - 31541209
Alignment:
| Q |
20 |
ttgtatcaaattgcaaaagggatagcccgtggactagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattc |
119 |
Q |
| |
|
||||| |||||||||| || || || || |||||||| ||||||||| |||||||| |||||||||| ||| | || || |||||||| ||||||| |
|
|
| T |
31541351 |
ttgtaccaaattgcaatcggaattgctcgaggactagaatacttgcatcaaggatgtatttcaagaattttgcatcttgatatcaaaccacaaaacattc |
31541252 |
T |
|
| Q |
120 |
ttttagatgagaatttatgtccaaaaatttcagattttggact |
162 |
Q |
| |
|
|||| ||||| ||||| || || ||||| || ||||||||||| |
|
|
| T |
31541251 |
ttttggatgaaaatttttgccccaaaatctctgattttggact |
31541209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 159
Target Start/End: Original strand, 31438946 - 31439055
Alignment:
| Q |
50 |
ggactagagtacttgcatagaggatgtaccacaagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaattt |
149 |
Q |
| |
|
|||||||||||||| ||| ||| |||| |||||||||| ||| | || || ||||| || ||||||||||||||||| |||| ||||||||||| | |
|
|
| T |
31438946 |
ggactagagtacttacatcaaggttgtatttcaagaattttgcatcttgatatcaaacctcaaaacattcttttagatgaagatttttgtccaaaaatat |
31439045 |
T |
|
| Q |
150 |
cagattttgg |
159 |
Q |
| |
|
| |||||||| |
|
|
| T |
31439046 |
ctgattttgg |
31439055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 31614633 - 31614566
Alignment:
| Q |
257 |
tttggaggagtttcacacaaatctgatgtttatagttatggaatgatgttgctggaaatggttggagg |
324 |
Q |
| |
|
||||| |||||||| ||||||||||||| ||||||||||||||| || | || |||||| ||||||| |
|
|
| T |
31614633 |
tttggcggagtttcttacaaatctgatgtatatagttatggaatgttgattcttgaaatgattggagg |
31614566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 31585655 - 31585590
Alignment:
| Q |
104 |
aaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaa |
169 |
Q |
| |
|
||||| || ||||||||||| ||||| |||| ||||||||||| || ||||||||||| |||||| |
|
|
| T |
31585655 |
aaaccccaaaacattcttttggatgaagatttttgtccaaaaatatctgattttggactagcaaaa |
31585590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 15063324 - 15063408
Alignment:
| Q |
81 |
caagaattttacatttcgacataaaaccacataacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgc |
165 |
Q |
| |
|
|||||||||| ||| | || || ||||| || ||||||||||||||||| |||| || |||||||| || |||||||| ||||| |
|
|
| T |
15063324 |
caagaattttgcatcttgatatcaaacctcaaaacattcttttagatgaagatttttgcccaaaaatatctgattttggtcttgc |
15063408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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