View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18784_low_13 (Length: 254)
Name: NF18784_low_13
Description: NF18784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18784_low_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 47116710 - 47116963
Alignment:
| Q |
1 |
tacatctcattcaatgatgttatgttaatgaacgaatccccaatccttccacaatagatggacaccactccaagcttcctcatacccttgttatttcatt |
100 |
Q |
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| T |
47116710 |
tacatctcattcaatgatgttatgttaatgaacgaatccccaatccttccacaatagatggacaccactccaagcttcctcatacccttgttatttcatt |
47116809 |
T |
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| Q |
101 |
tccttatgatatctcnnnnnnnctgacattgttttgtttcatcgcttctcaggtaattacaatagttatattttatcaaagatattcaataaccaatttc |
200 |
Q |
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| T |
47116810 |
tccttatgatatctctttttttctgacattgttttgtttcatcgcttctcaggtaattacaatagttatattttatcaaagatattcaataaccaatttc |
47116909 |
T |
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| Q |
201 |
ttttatatctttagtttcaattcaaggagataaatattcataccttttaacgat |
254 |
Q |
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| T |
47116910 |
ttttatatctttagtttcaattcaaggagataaatattcataccttttaacgat |
47116963 |
T |
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