View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18784_low_5 (Length: 357)
Name: NF18784_low_5
Description: NF18784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18784_low_5 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 15 - 332
Target Start/End: Complemental strand, 4679104 - 4678787
Alignment:
| Q |
15 |
attcgggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttc |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4679104 |
attcgggacattcttaaaaccttcgctcaaaatagcagcttggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttc |
4679005 |
T |
|
| Q |
115 |
cgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4679004 |
cgcttaaaaaagtcttgcaatagatcctgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatattactcccgcgcatctttgaat |
4678905 |
T |
|
| Q |
215 |
cactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattcc |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678904 |
cactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattcc |
4678805 |
T |
|
| Q |
315 |
ctgaaataaagaatctac |
332 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4678804 |
ctgaaataaagaatctac |
4678787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 337
Target Start/End: Original strand, 15594662 - 15594977
Alignment:
| Q |
22 |
acattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaa |
121 |
Q |
| |
|
||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||| | || | |
|
|
| T |
15594662 |
acatttttaaaaccttcactcaacaaagcagcctggacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaattcctttccctcga |
15594761 |
T |
|
| Q |
122 |
aaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaag |
221 |
Q |
| |
|
|||| || | |||||| | |||||||||||||||||| || || ||||| |||| |||| ||||| | | |||| |||||| | |||| ||| |
|
|
| T |
15594762 |
aaaaatccttcaatagttgttgcactttgggaatcctagaagacccaccaacaatgacaatatcatttacactactcttattcatcttagcatcatcaag |
15594861 |
T |
|
| Q |
222 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaat |
321 |
Q |
| |
|
|||||||| ||| | | |||||| || || |||| |||||| || ||||| |||||||||| |||||||| |||||| | ||||| || || | |||| |
|
|
| T |
15594862 |
acaactctcaactatcttcatacaatccttaaaaaagtccatgttgatttcttcaaacttggaacgagtaaccgatgaaaagaagtcaataccgttaaat |
15594961 |
T |
|
| Q |
322 |
aaagaatctacctcaa |
337 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
15594962 |
aaacaatctacctcaa |
15594977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 187
Target Start/End: Complemental strand, 34467328 - 34467163
Alignment:
| Q |
22 |
acattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaa |
121 |
Q |
| |
|
||||| ||||| |||| ||||| | |||||| || | |||||| ||||||| ||||||||||| |||||||| || ||||| | |||||| | || | |
|
|
| T |
34467328 |
acattgttaaagcctttactcaacaaagcagcttgcacagctgcgacataagcgacagcctcatcagggttgatgctattgcatagatccttaccattga |
34467229 |
T |
|
| Q |
122 |
aaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
187 |
Q |
| |
|
||||||| ||||||| | ||||||||||||||||| || || || || ||||| ||| |||||| |
|
|
| T |
34467228 |
aaaagtcccgcaatagctgctgcactttgggaatcctagaagagcccccgacaaggacagcatcat |
34467163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 52549334 - 52549269
Alignment:
| Q |
240 |
catacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
305 |
Q |
| |
|
||||||||| || |||||||||||||| ||||||||||||||||| | | | || ||||||||||| |
|
|
| T |
52549334 |
catacactccttaaaaaggtccatattcatttcctcaaacttggccctattgatcgatgaagaaaa |
52549269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 34467089 - 34467016
Alignment:
| Q |
258 |
gtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatcta |
331 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || || ||| ||||| ||| ||| | |||||||||||| |
|
|
| T |
34467089 |
gtccatattgatttcctcaaacttggcacgagtgattgacgaatggaagtcaattacctcatataaagaatcta |
34467016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 339
Target Start/End: Complemental strand, 16658060 - 16657740
Alignment:
| Q |
19 |
gggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgct |
118 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||| || | ||||||||| ||||||||||| ||||| ||||||||||| ||||| |||||||| | || |
|
|
| T |
16658060 |
gggacattcttaaagccttcactcaaaatagcagcttgaacagctgcaccgtaagcaacagcttcatccgggttgatacttttgcataaatccttgccct |
16657961 |
T |
|
| Q |
119 |
taaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcact |
218 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| | ||||||||||||||| |
|
|
| T |
16657960 |
tgaaaaagtcttgcaatagatcctgcactttgggaatcctagatgagccacccacaagaacaacgtcatcaatatcaccaatgtgcatctttgaatcacg |
16657861 |
T |
|
| Q |
219 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
318 |
Q |
| |
|
||||||| ||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| || || |||||||||||||| ||||||||| |
|
|
| T |
16657860 |
aagacaattctcaacagttttcatacactcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaagtcaattccctga |
16657761 |
T |
|
| Q |
319 |
aataaagaatctacctcaaca |
339 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
16657760 |
aataaagaatctacctcaaca |
16657740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 337
Target Start/End: Original strand, 43625040 - 43625355
Alignment:
| Q |
22 |
acattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaa |
121 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || || | ||| | ||||||| ||| | |
|
|
| T |
43625040 |
acattcttaatgcctttactcaaaatagcagcctggacagctgcaccataagcaacagcctcatcagggtttatgctttcgcatgattccttccccttga |
43625139 |
T |
|
| Q |
122 |
aaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaag |
221 |
Q |
| |
|
|||| || ||||| || | || ||||| ||||| || || || || || ||||| |||||||| | ||| ||||| | || ||| | |||| |||| |
|
|
| T |
43625140 |
aaaactcctgcaacagctgttttacttttggaattctagaggagccgccaacaaggacaacatcgtggatagcactcttgtccaacttggcatcaataag |
43625239 |
T |
|
| Q |
222 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaat |
321 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||||| | ||||| || || | ||| |
|
|
| T |
43625240 |
acaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgattgatgaaaagaagtcaataccacggaat |
43625339 |
T |
|
| Q |
322 |
aaagaatctacctcaa |
337 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
43625340 |
aaagaatctacctcaa |
43625355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 337
Target Start/End: Original strand, 11999036 - 11999350
Alignment:
| Q |
22 |
acattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaa |
121 |
Q |
| |
|
|||||||||| | |||| ||||| | |||||| || | |||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||||| || | |
|
|
| T |
11999036 |
acattcttaacatcttcactcaacaaagcagcttgaacagctgccccataagctacagcctcatcagggttaatgctcttgcacaactccttcccgttga |
11999135 |
T |
|
| Q |
122 |
aaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaag |
221 |
Q |
| |
|
||||||| || ||||| | ||| |||||||| ||||| || || ||||| ||||| ||||||||||| ||| |||| | |||||||| ||| ||| |
|
|
| T |
11999136 |
aaaagtcatgtaatagctgttggactttggg-atcctagaagatccaccaacaagtacaacatcatctatagtactcttgtccatctttgcatccataat |
11999234 |
T |
|
| Q |
222 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaat |
321 |
Q |
| |
|
|||||||| |||||| | ||||| || || | ||| || | ||| | |||||||||||| || ||| | || ||||||||||| || || || |||||| |
|
|
| T |
11999235 |
acaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaat |
11999334 |
T |
|
| Q |
322 |
aaagaatctacctcaa |
337 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
11999335 |
aaagaatctacctcaa |
11999350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 337
Target Start/End: Complemental strand, 12245946 - 12245631
Alignment:
| Q |
22 |
acattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaa |
121 |
Q |
| |
|
|||||||||| | ||| ||||| | |||||| || | |||||| ||||||||||||||||| || ||||| || ||||||||||| ||||||| || | |
|
|
| T |
12245946 |
acattcttaacatctttactcaacaaagcagcttgaacagctgccccataagcaacagcctcgtcagggttaatgctcttgcacaattccttcccgttga |
12245847 |
T |
|
| Q |
122 |
aaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaag |
221 |
Q |
| |
|
||||||| || ||||| | ||| |||||||||||||| || || ||||| ||||| |||| |||||| ||| |||| | |||||||| ||| ||| |
|
|
| T |
12245846 |
aaaagtcctgtaatagctgttggactttgggaatcctagaagatccaccaacaagtacaaaatcatctatagtactcttgtccatctttgcatccataat |
12245747 |
T |
|
| Q |
222 |
acaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaat |
321 |
Q |
| |
|
|||||||| |||||| | ||||| || || | ||| || | ||| | |||||||||||| || ||| | || ||||||||||| || || || |||||| |
|
|
| T |
12245746 |
acaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaaactttgcccgattgatggatgaagaaaaatcaatgccttgaaat |
12245647 |
T |
|
| Q |
322 |
aaagaatctacctcaa |
337 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
12245646 |
aaagaatctacctcaa |
12245631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 337
Target Start/End: Original strand, 14703049 - 14703351
Alignment:
| Q |
35 |
cttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaa |
134 |
Q |
| |
|
|||| ||||| | ||||||||| | |||||| |||||||| ||||| ||||| ||||| || || |||||||| ||||||| || |||||||| || || |
|
|
| T |
14703049 |
cttcactcaacaaagcagcctgaacagctgccccataagctacagcttcatcagggttaatgctgttgcacaactccttcccctggaaaaagtcctgtaa |
14703148 |
T |
|
| Q |
135 |
tagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaaca |
234 |
Q |
| |
|
|| | || ||||||||||||| || || ||||| ||||||||||||||||| | |||| | |||||| | |||| |||||||||||| |||| |
|
|
| T |
14703149 |
taattgctgtactttgggaatccgagaagacccaccgacaagaacaacatcatctactctactcttgtccatcttagcatcaataagacaactctcaaca |
14703248 |
T |
|
| Q |
235 |
gtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacct |
334 |
Q |
| |
|
| | || |||||| || |||| ||||||||| ||||| ||||||||||| | | | || |||||||||||||| || | |||||||||| |||||||| |
|
|
| T |
14703249 |
atcttcacacactcattaaaaaagtccatattcatttcttcaaacttggccctattgatcgatgaagaaaagtcaatgcattgaaataaagcatctacct |
14703348 |
T |
|
| Q |
335 |
caa |
337 |
Q |
| |
|
||| |
|
|
| T |
14703349 |
caa |
14703351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 337
Target Start/End: Complemental strand, 12259095 - 12258806
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| ||||| || ||| |||| ||||||||||| || || || ||||||||||| || |||| ||| ||||| || || ||||| | |||||| |
|
|
| T |
12259095 |
agcagcctgaatagccgccccaaaagctacagcctcatcaggattaatgctcttgcacaactctttccccttgaaaaaatcctgtaatagctgctgcact |
12258996 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
247 |
Q |
| |
|
||| ||||||| || || ||||| ||||| ||||||||||| | || |||| | | | || | ||| |||||||||||| |||||| | ||| || | |
|
|
| T |
12258995 |
ttgagaatcctagaagacccacctacaaggacaacatcatctacattactcttgtccgtgttagcatccgtaagacaactctcaacagtcttcatgcatt |
12258896 |
T |
|
| Q |
248 |
cgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
337 |
Q |
| |
|
| |||||||| |||| ||| ||||||||||||||||||||| | || |||| |||||| || || || | | |||||||||||| ||||| |
|
|
| T |
12258895 |
cattgaaaagttccaaatttatttcctcaaacttggcacgattgattgatgcagaaaaatcaatgccatcacataaagaatctatctcaa |
12258806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 49 - 337
Target Start/End: Original strand, 7541881 - 7542169
Alignment:
| Q |
49 |
gcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactt |
148 |
Q |
| |
|
|||||||| | |||||| |||||||||||||||||||| || || || ||||||||||| ||||| | || |||||||| | ||||| | || ||| |
|
|
| T |
7541881 |
gcagcctgaacagctgccccataagcaacagcctcatcaggattaatgctcttgcacaagtcctttccattgaaaaagtcctttaatagctgatgtacta |
7541980 |
T |
|
| Q |
149 |
tgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactc |
248 |
Q |
| |
|
||||||||||||| || || || ||||| ||||||||||| || ||| | ||| || | |||| ||||||| || |||| | ||||||||| |
|
|
| T |
7541981 |
tgggaatcctcgaagacccgccgacaaggacaacatcatctatcatgctcttgtccatattagcatcaataagacagcttccaacaatcgtcatacactc |
7542080 |
T |
|
| Q |
249 |
gttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
337 |
Q |
| |
|
||| ||||| |||||||| || |||||||||||||| | | | || |||||||||||||| || || |||||||||||||||||||||| |
|
|
| T |
7542081 |
gttaaaaagatccatattcatctcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaa |
7542169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 290
Target Start/End: Complemental strand, 16662520 - 16662264
Alignment:
| Q |
34 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
133 |
Q |
| |
|
||||| ||||| | |||||| || | |||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||| || || |||| ||| |
|
|
| T |
16662520 |
ccttcactcaacacagcagcttgcacagctgccccataagcaacagcctcatcagggttgatgctcttgcacaactccttcccattgaagaagttacgca |
16662421 |
T |
|
| Q |
134 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaac |
233 |
Q |
| |
|
||| || |||||||| |||||||| || || || || |||||||||| ||||| | | | | | | |||||||||||| || |||||||| ||| |
|
|
| T |
16662420 |
ataattcctgcacttttggaatcctagacgagcccccgacaagaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaac |
16662321 |
T |
|
| Q |
234 |
agtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagt |
290 |
Q |
| |
|
| | | |||||||||||| |||||| ||||||| ||||| ||||||||| ||||||| |
|
|
| T |
16662320 |
aatcttcatacactcgttaaaaaggcccatattgatttcttcaaacttgacacgagt |
16662264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 68 - 337
Target Start/End: Original strand, 12234364 - 12234632
Alignment:
| Q |
68 |
cataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaacc |
167 |
Q |
| |
|
|||||||||| ||||| || ||||| ||||||||||||| ||||||| ||| ||||| || |||||||| | ||||||||||||||||| || || || |
|
|
| T |
12234364 |
cataagcaaccgcctc-tcagggttaatactcttgcacagctccttccccttgaaaaaatcctgcaatagttgctgcactttgggaatcctagaggaccc |
12234462 |
T |
|
| Q |
168 |
acccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatatta |
267 |
Q |
| |
|
|| | ||| ||||| ||||| | ||| | |||||| | ||||||||||||||||| |||| | | ||||||||| | | ||| |||||||| |
|
|
| T |
12234463 |
gccaataaggacaacttcatccaccctacttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaataagaagatccatattc |
12234562 |
T |
|
| Q |
268 |
atttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
337 |
Q |
| |
|
||||||||||||||||| | | | || ||||||||||| || || || | |||||||||||||||||||| |
|
|
| T |
12234563 |
atttcctcaaacttggccctattgatcgatgaagaaaaatcaatgccttcaaataaagaatctacctcaa |
12234632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 157; Significance: 2e-83; HSPs: 34)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 19 - 339
Target Start/End: Original strand, 8658988 - 8659308
Alignment:
| Q |
19 |
gggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgct |
118 |
Q |
| |
|
|||||||||||||| |||| ||| |||| |||||| || | ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| |
|
|
| T |
8658988 |
gggacattcttaaagcctttgcttaaaacagcagcttgaagagctgcaccataagcaacagcctcatctgggttgatactcttgtataaaaccttctttg |
8659087 |
T |
|
| Q |
119 |
taaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcact |
218 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||||||||| | || |||||||| || |
|
|
| T |
8659088 |
ggaaaaggtcttgcaatagatcttgcactttgggaatcctagacgaaccacccacaagaacaatatcgtcaatatcactcatctgtatttttgaatcgct |
8659187 |
T |
|
| Q |
219 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
318 |
Q |
| |
|
||||||||||| |||||||| ||||||||| || ||||| |||||||| |||||||||||| |||||||||| || ||||| | ||||||||||||||| |
|
|
| T |
8659188 |
aagacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagtctattccctga |
8659287 |
T |
|
| Q |
319 |
aataaagaatctacctcaaca |
339 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
8659288 |
aataaagaatcgacctcaaca |
8659308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 16 - 338
Target Start/End: Complemental strand, 10494920 - 10494598
Alignment:
| Q |
16 |
ttcgggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttcc |
115 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | || | || ||||||| |
|
|
| T |
10494920 |
ttcgggacattcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatacgcatgaataattccttcc |
10494821 |
T |
|
| Q |
116 |
gcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatc |
215 |
Q |
| |
|
||| ||||| ||| |||||||||| ||||||||||||||||| || || |||||||||||||||| ||||||||||||| || | ||||||||||| |
|
|
| T |
10494820 |
ccttgaaaaattctagcaatagatcctgcactttgggaatcctagacgagccacccacaagaacaatatcatcaatatcattcttgtatatctttgaatc |
10494721 |
T |
|
| Q |
216 |
actaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccc |
315 |
Q |
| |
|
|| |||||||| | |||| | | |||||||||| |||||| ||| ||||||||||||||||| ||||||||||| || |||||||||||||| |||||| |
|
|
| T |
10494720 |
cctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattccc |
10494621 |
T |
|
| Q |
316 |
tgaaataaagaatctacctcaac |
338 |
Q |
| |
|
|||||||| ||| |||||||| |
|
|
| T |
10494620 |
ataaataaagcatcgacctcaac |
10494598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 19 - 338
Target Start/End: Original strand, 1301086 - 1301404
Alignment:
| Q |
19 |
gggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgct |
118 |
Q |
| |
|
||||||||||| || |||| ||| ||||||||||| || |||||||||||||||||||||||||| || ||||||||||||||| | ||| | ||| | |
|
|
| T |
1301086 |
gggacattcttgaatcctttgcttaaaatagcagcttgaatagctgcaccataagcaacagcctcgtc-gggttgatactcttgtataaaactttctccg |
1301184 |
T |
|
| Q |
119 |
taaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcact |
218 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||| || || |||||||||||||||| |||||| ||||||||| || || |||||||| || |
|
|
| T |
1301185 |
ggaaaatgtcttgcaatatatcttgcactttgggaatcctagacgagccacccacaagaacaatatcatcgatatcactcatgcatatttttgaatcgct |
1301284 |
T |
|
| Q |
219 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
318 |
Q |
| |
|
||||||||||| ||| |||| ||||||| || ||||| |||||||||||||||||||||||||||||||| || ||||| | ||||| ||||||||| |
|
|
| T |
1301285 |
aagacaactctcaacggtttttgtacactcattaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctga |
1301384 |
T |
|
| Q |
319 |
aataaagaatctacctcaac |
338 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
1301385 |
aataaagaatcgacctcaac |
1301404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 339
Target Start/End: Original strand, 8654075 - 8654395
Alignment:
| Q |
19 |
gggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgct |
118 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||| | ||| || ||||| |||| ||||||||||||||||||| || | ||||| |||||| || |
|
|
| T |
8654075 |
gggacattcttaaagtcttcactcaaaatagcagcctgaacagcagcgccatatgcaatagcctcatctgggttgatattcataaacaaagccttcccct |
8654174 |
T |
|
| Q |
119 |
taaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcact |
218 |
Q |
| |
|
| ||||| ||| |||||||||| ||||||||||||||||| || || |||||||| || |||||||||||||||||| || | ||||||||||| || |
|
|
| T |
8654175 |
tgaaaaactctagcaatagatcctgcactttgggaatcctagacgagccacccacgagtacaacatcatcaatatcattcttgtatatctttgaatctct |
8654274 |
T |
|
| Q |
219 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
318 |
Q |
| |
|
|||||||| | |||| | | |||||||| ||||||| ||||||||||||||||||||| || |||||||| || |||||||||||||| |||||| | |
|
|
| T |
8654275 |
gagacaactgtcaacaatattgatacactcattgaaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaagtcgattcccata |
8654374 |
T |
|
| Q |
319 |
aataaagaatctacctcaaca |
339 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
8654375 |
aataaagcatctacctcaaca |
8654395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 339
Target Start/End: Original strand, 8667044 - 8667364
Alignment:
| Q |
19 |
gggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgct |
118 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| | || | || ||||||| || |
|
|
| T |
8667044 |
gggacattcttacagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcgtctgggttgatacccatgaataattccttcccct |
8667143 |
T |
|
| Q |
119 |
taaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcact |
218 |
Q |
| |
|
| ||| | ||| ||||| | || ||||||||||||||||| || || ||||| ||||| |||||||||||||||||| || | ||||||||||| || |
|
|
| T |
8667144 |
tgaaatattctagcaattgttcctgcactttgggaatcctagacgagccaccgacaagtacaacatcatcaatatcattcttgtatatctttgaatccct |
8667243 |
T |
|
| Q |
219 |
aagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctga |
318 |
Q |
| |
|
||||| | | ||| | | ||||||||| ||||||| |||||| |||| ||||||||| || ||||||||||| |||||| ||||||| |||||| | |
|
|
| T |
8667244 |
gagacaggtgtcaactatattcatacactcattgaaaaagtccatgttaagttcctcaaatttagcacgagtaattgatgaacaaaagtcgattcccgta |
8667343 |
T |
|
| Q |
319 |
aataaagaatctacctcaaca |
339 |
Q |
| |
|
||||||| ||||||||||||| |
|
|
| T |
8667344 |
aataaagcatctacctcaaca |
8667364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 48 - 290
Target Start/End: Complemental strand, 27831389 - 27831147
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | |||||||||| |||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||| |||||| | |||||| |
|
|
| T |
27831389 |
agcagcctgcacagctgcaccaaaagcaacagcctcatcaggattgatgctcttgcacaaatcctttcccttgaaaaagtccgccaatagctgctgcact |
27831290 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
247 |
Q |
| |
|
||||||||||| || || ||||| ||||| ||||||||||| ||| |||| | |||||| || ||| | |||||||||| |||||| |||||||| | |
|
|
| T |
27831289 |
ttgggaatccttgaagagccaccaacaaggacaacatcatctatactactcttgtccatcttagagtcagtgagacaactctcaacagtctccatacatt |
27831190 |
T |
|
| Q |
248 |
cgttgaaaaggtccatattaatttcctcaaacttggcacgagt |
290 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
27831189 |
cattgaaaaggtccatattgatttcctcaaactttgcacgagt |
27831147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 34 - 337
Target Start/End: Original strand, 6789152 - 6789455
Alignment:
| Q |
34 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
133 |
Q |
| |
|
||||||||||| | ||||||||||| ||||||||| ||||||||||||||||| |||||||| ||| ||||||||||||| | | | |||| ||||||| |
|
|
| T |
6789152 |
ccttcgctcaacaaagcagcctggacagctgcaccgtaagcaacagcctcatcagggttgatgctcatgcacaaatcctttcccatgaaaacttcttgca |
6789251 |
T |
|
| Q |
134 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaac |
233 |
Q |
| |
|
|||| | ||||||||||||||| || || || ||||| ||||| |||||||||| | | |||| | |||||| | ||| ||||||||||| ||| |
|
|
| T |
6789252 |
atagttgttgcactttgggaattctagaagacccaccaacaaggacaacatcatttacaatactcttgtccatcttagcgtcaacaagacaactctcaac |
6789351 |
T |
|
| Q |
234 |
agtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacc |
333 |
Q |
| |
|
|| | ||||||||| || |||| |||||||| ||||||||||||||||| ||||||| |||||| ||||| || |||||||||||||| |||||| |
|
|
| T |
6789352 |
ggtcttcatacactcattaaaaatatccatattgatttcctcaaacttggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacc |
6789451 |
T |
|
| Q |
334 |
tcaa |
337 |
Q |
| |
|
|||| |
|
|
| T |
6789452 |
tcaa |
6789455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 48 - 340
Target Start/End: Original strand, 17267593 - 17267885
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||||| ||||||||||| ||||| || ||||||| ||| || |||| |||||||| | |||||| |
|
|
| T |
17267593 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatacttttgcataattccttccccttgaagaagttctgcaatagttgctgcact |
17267692 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
247 |
Q |
| |
|
|| |||||||| || || ||||| ||||| ||||||||||||| ||| | ||||| | |||||||||||| ||| |||| | ||||| |||| |
|
|
| T |
17267693 |
ttcggaatcctagaagacccaccaacaaggacaacatcatcaactctgctcttgtcaatcttagcatcactaagacacttctcaacaatctccatgcact |
17267792 |
T |
|
| Q |
248 |
cgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacat |
340 |
Q |
| |
|
| | |||||||||||||| ||||||||||||||||||||||| || || |||||||| || | |||| |||||||| ||||||||||||| |
|
|
| T |
17267793 |
catcaaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgtctacctcaacat |
17267885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 337
Target Start/End: Original strand, 3146892 - 3147207
Alignment:
| Q |
22 |
acattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaa |
121 |
Q |
| |
|
||||| ||||| |||| ||||| | |||||| || | |||||||||||||||||| |||||||| |||||||| || || |||| || ||||| || |
|
|
| T |
3146892 |
acatttttaaagtcttcactcaacaaagcagcttgcacagctgcaccataagcaacggcctcatcagggttgatgctgttacacagatgcttccctgcaa |
3146991 |
T |
|
| Q |
122 |
aaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttga-atcactaa |
220 |
Q |
| |
|
|||| || |||||||| | ||||||||| ||||| || || || ||||| ||||| || ||||||| ||| |||| | ||| || || |||| | |
|
|
| T |
3146992 |
aaaattcctgcaatagttgttgcacttttggaattctagacgagccaccgacaaggacgacatcatgtatagcacttttgtccat-ttcgacatcagcga |
3147090 |
T |
|
| Q |
221 |
gacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaa |
320 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||||||||| || |||||| | ||||| | ||||||||| |
|
|
| T |
3147091 |
aacaactcttaacagtttccaaacactcagtgaaaagatccatattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaa |
3147190 |
T |
|
| Q |
321 |
taaagaatctacctcaa |
337 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
3147191 |
taaagaatctatctcaa |
3147207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 60 - 188
Target Start/End: Original strand, 8590304 - 8590432
Alignment:
| Q |
60 |
agctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctc |
159 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| || ||| | | |||||||| | ||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
8590304 |
agctgcaccataagcaacagcctcatctggattgatgctattgtaaagatccttccccataaaaaagtcttgcaatagctgctgcactttgggaatccta |
8590403 |
T |
|
| Q |
160 |
gatgaaccacccacaagaacaacatcatc |
188 |
Q |
| |
|
|| |||||||| ||||| ||||||||||| |
|
|
| T |
8590404 |
gaagaaccaccaacaagtacaacatcatc |
8590432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 48 - 340
Target Start/End: Original strand, 17259895 - 17260187
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||||| |||||||| |||||||| || ||||| | ||| || || || |||||||| | |||||| |
|
|
| T |
17259895 |
agcagcctgaacagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttacccttgaagaaatcctgcaatagttgctgcact |
17259994 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
247 |
Q |
| |
|
|| |||||||| || || ||||| ||||| |||||||||||||| ||| | ||||| |||||||||||| ||| |||| | ||||| |||| |
|
|
| T |
17259995 |
ttcggaatcctagaagatccaccaacaaggacaacatcatcaattctgctcttgtcaatcttaccatcactaagacacttctcaacaatctccatgcact |
17260094 |
T |
|
| Q |
248 |
cgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaacat |
340 |
Q |
| |
|
| | |||||||||||||| ||||| ||||||||||||||||| || || |||||||| | | |||| |||||||| ||||||||||||| |
|
|
| T |
17260095 |
cataaaaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaacacccttaaataaagcgtctacctcaacat |
17260187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 48 - 331
Target Start/End: Original strand, 8545287 - 8545570
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||| || ||||||| ||||||||| || || ||||| | | |||| |
|
|
| T |
8545287 |
agcagcctggacagctgcaccataagcaacagcctcatcagggttaatgctcttgcataattccttccccttaaaaaactcctgtaatagctgtctcact |
8545386 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
247 |
Q |
| |
|
|| |||||||| || ||||| || ||||| ||||||||||| | | || | | |||||| | |||| |||||||| |||||||| |||||||||| |
|
|
| T |
8545387 |
ttaggaatcctagaagaaccgccaacaaggacaacatcatctacactacccttgtccatcttagcatcaacaagacaacaattaacagtgtccatacact |
8545486 |
T |
|
| Q |
248 |
cgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatcta |
331 |
Q |
| |
|
| || ||||||||||| | || |||||||||||| ||||| || ||||| ||||||| || || ||| |||||| ||||| |
|
|
| T |
8545487 |
tttcaaagaggtccatattcaattgctcaaacttggcccgagtgatgcatgaacaaaagtcaataccttgatataaagcatcta |
8545570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 48 - 188
Target Start/End: Complemental strand, 7878247 - 7878107
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| ||||| |||||||| || |||| | |||||||| |||||||||||| |||||||| | |||||| |
|
|
| T |
7878247 |
agcagcctgaacagctgcaccataagcaacagcttcatccgggttgatgctactgcaaatatccttccccttaaaaaagtcctgcaatagctgctgcact |
7878148 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
188 |
Q |
| |
|
||| ||||||| ||||| ||||| ||||| ||||||||||| |
|
|
| T |
7878147 |
ttgagaatcctagatgatccaccaacaagtacaacatcatc |
7878107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 29582355 - 29582248
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||| ||||| ||||||||||| | |||||| |
|
|
| T |
29582355 |
agcagcctgcacagctgcaccataagcaacagcctcatcagggttgatgctcatgcacaaatccttccccttgaaaaattcttgcaatagctgatgcact |
29582256 |
T |
|
| Q |
148 |
ttgggaat |
155 |
Q |
| |
|
|||||||| |
|
|
| T |
29582255 |
ttgggaat |
29582248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 48 - 290
Target Start/End: Original strand, 8581354 - 8581596
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| || ||||||| || ||||| || || ||||| | | |||| |
|
|
| T |
8581354 |
agcagcctgaatagcagcaccataagcaacagcctcatcagggttgatgctcttgcataattccttcccctggaaaaactcctgtaatagctgtctcact |
8581453 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
247 |
Q |
| |
|
|| |||||||| || |||||||| ||||| ||||||||||| | | || || | |||||| | ||| ||||||||| |||||||| |||||||||| |
|
|
| T |
8581454 |
ttaggaatcctagaagaaccaccaacaaggacaacatcatctacactacccctgtccatcttagcatcggcaagacaactattaacagtgtccatacact |
8581553 |
T |
|
| Q |
248 |
cgttgaaaaggtccatattaatttcctcaaacttggcacgagt |
290 |
Q |
| |
|
| || |||| |||||| |||| |||||||||||| ||||| |
|
|
| T |
8581554 |
tttcaaagaggttcatattcatttgctcaaacttggcccgagt |
8581596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 72 - 302
Target Start/End: Original strand, 8616359 - 8616589
Alignment:
| Q |
72 |
agcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccaccc |
171 |
Q |
| |
|
||||||||||||||| || ||||| |||||||||||||||||| | |||||||| |||||| || |||||||| |||||||| || || ||||| |
|
|
| T |
8616359 |
agcaacagcctcatcaggattgatgttcttgcacaaatccttcccatcgaaaaagtcactcaatagttcctgcactttaggaatcctagacgagccaccg |
8616458 |
T |
|
| Q |
172 |
acaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaattt |
271 |
Q |
| |
|
|||||||||| |||||| | | |||| ||||| |||||| ||| |||||||| |||||| | ||||||||||| |||||||||||||| |||| |
|
|
| T |
8616459 |
acaagaacaatatcatctacactactcttctctatcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgattt |
8616558 |
T |
|
| Q |
272 |
cctcaaacttggcacgagtaatagatgaaga |
302 |
Q |
| |
|
|||||||||| ||||||| || |||||||| |
|
|
| T |
8616559 |
cctcaaacttaacacgagtgattgatgaaga |
8616589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 13333813 - 13333679
Alignment:
| Q |
205 |
atctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaa |
304 |
Q |
| |
|
||||||||||| || |||||||| | |||| | | |||||||||| |||||| ||| ||||||||||||||||| ||||||||||| || |||||||||| |
|
|
| T |
13333813 |
atctttgaatccctgagacaactgtcaacaatattcatacactcgatgaaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaa |
13333714 |
T |
|
| Q |
305 |
agtctattccctgaaataaagaatctacctcaaca |
339 |
Q |
| |
|
|||| |||||| |||||||| |||||| |||||| |
|
|
| T |
13333713 |
agtcgattcccataaataaagcatctacttcaaca |
13333679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 13333914 - 13333833
Alignment:
| Q |
16 |
ttcgggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatac |
97 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13333914 |
ttcgggacagtcttaaagccttcactcaaaatagcagcctgaacagctgcaccataagcaacagcctcatctgggttgatac |
13333833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 300
Target Start/End: Original strand, 8537658 - 8537942
Alignment:
| Q |
16 |
ttcgggacattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttcc |
115 |
Q |
| |
|
||||| ||| |||||| ||| ||||||| | ||||||||||| ||| ||||||||||||||||| ||||| |||||||| || || | | |||||||| |
|
|
| T |
8537658 |
ttcggaacagtcttaatgcctccgctcaacaaagcagcctggacagcagcaccataagcaacagcttcatcagggttgatgcttttaaaaatatccttcc |
8537757 |
T |
|
| Q |
116 |
gcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatc |
215 |
Q |
| |
|
| | ||||||| ||||| ||| ||||||||||||||||| || || ||||| || || ||||||||||| ||| ||| | | |||||| | ||| |
|
|
| T |
8537758 |
ccctgaaaaagttttgcagcagactctgcactttgggaatcctagaagagccaccaactagtacaacatcatccatactactactgtccatcttagcatc |
8537857 |
T |
|
| Q |
216 |
actaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaa |
300 |
Q |
| |
|
| ||| ||||||||||||||||| |||||||| | || |||||||| || | || |||||||||||| ||||| || |||||| |
|
|
| T |
8537858 |
attaaaacaactcttaacagttttcatacacttttcaaagaggtccatgttgagttgctcaaacttggcccgagtgattgatgaa |
8537942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 8609571 - 8609711
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||||| |||||||| ||| | ||||||||||| | || ||||||||||||| ||| | | |||| |
|
|
| T |
8609571 |
agcagcctggacagcagcaccataagcaaccgcctcatcagggttgatgctcatacacaaatcctttccattgaaaaagtcttgcagtagctgcttcact |
8609670 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc |
188 |
Q |
| |
|
|| |||||||| || ||||| || ||||||||||||||||| |
|
|
| T |
8609671 |
ttcggaatcctagaagaacctccaacaagaacaacatcatc |
8609711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 337
Target Start/End: Original strand, 8569967 - 8570254
Alignment:
| Q |
50 |
cagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcacttt |
149 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||| ||||| || || ||||| || ||||||| || ||||| ||||| ||||| | |||||| |
|
|
| T |
8569967 |
cagcctgaatagctgcaccgtaagcaacagcctcatcagggttaatgctgttgcataattccttcccctggaaaaactcttgtaatagctgcctcacttt |
8570066 |
T |
|
| Q |
150 |
gggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcg |
249 |
Q |
| |
|
|||||||| || |||||||| ||||| ||||||||||| | | | || |||||| | |||| ||||||||| ||||||||||||||||||| |
|
|
| T |
8570067 |
aggaatcctagaagaaccaccaacaaggacaacatcatctacactattcttttccatcttagcatcagcaagacaactattaacagtttccatacacttt |
8570166 |
T |
|
| Q |
250 |
ttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
337 |
Q |
| |
|
| || |||| |||||| ||||||||||||||||| || || || |||||| ||||| ||||||| | ||| || ||||| ||||| |
|
|
| T |
8570167 |
tcaaagaggttcatattcatttcctcaaacttggcccgggttattgatgaactgaagtcaattcccttatatatagcatctagctcaa |
8570254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 290
Target Start/End: Complemental strand, 8383377 - 8383148
Alignment:
| Q |
61 |
gctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcg |
160 |
Q |
| |
|
||||||||||||||||||||||| || || || || ||| || | ||||||| || ||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
8383377 |
gctgcaccataagcaacagcctcgtcaggatttatgctcacacaaaggtccttccaattgaaaaagtgttgcaatagctcttgcactttgggaatcctcg |
8383278 |
T |
|
| Q |
161 |
atgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtc |
260 |
Q |
| |
|
| |||||||| | |||||||||||||| | | |||| | |||||| | |||| ||||||| |||| |||||| |||||||||| | || ||||| |
|
|
| T |
8383277 |
aagaaccaccgatgagaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacacttttcaaataggtc |
8383178 |
T |
|
| Q |
261 |
catattaatttcctcaaacttggcacgagt |
290 |
Q |
| |
|
|||||| | || |||||| ||||| ||||| |
|
|
| T |
8383177 |
catattgagttgctcaaatttggcccgagt |
8383148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 29578186 - 29578053
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||| || ||||| || ||| ||||||||||| | | ||| ||||||||||||||||| | ||||| |
|
|
| T |
29578186 |
agcagcctgcacagctgcaccataagcaacagcctcgtcagggtttatgctcatgcacaaatccctacccttgaaaaagtcttgcaatagtttccgcact |
29578087 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaa |
181 |
Q |
| |
|
|||||||| || |||||||| || ||||| |||| |
|
|
| T |
29578086 |
ttgggaattctagatgaacctccaacaaggacaa |
29578053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 187
Target Start/End: Original strand, 8102313 - 8102460
Alignment:
| Q |
40 |
ctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagat |
139 |
Q |
| |
|
||||| |||||||| || | ||| |||||||||||||||||||| || |||||||| || ||||| | ||||| | || || ||||||||||| || | |
|
|
| T |
8102313 |
ctcaagatagcagcttgaacagcggcaccataagcaacagcctcgtcggggttgatgcttttgcatagctccttaccattgaagaagtcttgcaacagtt |
8102412 |
T |
|
| Q |
140 |
cttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
187 |
Q |
| |
|
|| |||||||||||||| | ||||||||| |||||||||||||||| |
|
|
| T |
8102413 |
gctgaactttgggaatcctagttgaaccaccaacaagaacaacatcat |
8102460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 8575966 - 8576120
Alignment:
| Q |
34 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
133 |
Q |
| |
|
||||| ||||| | |||||| |||| | | ||||||||||||||||||||||| |||||||| ||||| || || ||||||| ||| |||| || || | |
|
|
| T |
8575966 |
ccttcactcaacaaagcagcttggacaacagcaccataagcaacagcctcatcagggttgatgctcttacataattccttccccttgaaaacctcctgta |
8576065 |
T |
|
| Q |
134 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
188 |
Q |
| |
|
|||| | | |||||| |||||||| || |||||||| ||||| ||||||||||| |
|
|
| T |
8576066 |
atagctgtctcactttaggaatcctagaagaaccaccaacaaggacaacatcatc |
8576120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 8673979 - 8673894
Alignment:
| Q |
204 |
catctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgag |
289 |
Q |
| |
|
|||||| | |||| |||||||| ||| ||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
8673979 |
catcttggcatcaataagacaattctcaacagtttccaaacactcgttgaaaagattgatattgatttcctcaaacttggcacgag |
8673894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 193
Target Start/End: Complemental strand, 8636856 - 8636712
Alignment:
| Q |
49 |
gcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactt |
148 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| | |||||| ||||| |||| |||||| |||||||| ||| || ||||| | ||||| | |
|
|
| T |
8636856 |
gcagcctggactgctgctccataagcaacagcctcatcagcgttgatgctcttacacagttccttcgccttaaaaatgtcctgtaatagttgctgcacct |
8636757 |
T |
|
| Q |
149 |
tgggaatcctcgatgaaccacccacaagaacaacatcatcaatat |
193 |
Q |
| |
|
| |||||||| || || ||||| ||||| ||||||||||| |||| |
|
|
| T |
8636756 |
ttggaatcctagaggagccaccaacaaggacaacatcatctatat |
8636712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 331
Target Start/End: Original strand, 8646531 - 8646814
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | ||||| ||||||||||| ||| |||| |||||||| |||| ||| || |||||| || ||||| || | || | | ||| ||| |
|
|
| T |
8646531 |
agcagcctgaacggctgcgccataagcaacggccacatcagggttgatgctctcgcataattccttctcattgaaaaactccttcagcatctgttgtact |
8646630 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacact |
247 |
Q |
| |
|
|| ||||| || || || ||||| |||||||||||||||| ||| |||| | |||||| | |||| || ||||||||| ||||||||||| ||| | |
|
|
| T |
8646631 |
tttggaattctagaggagccaccaacaagaacaacatcatggatagaactcttgtccatcttggcatcattatgacaactctcaacagtttccaaacatt |
8646730 |
T |
|
| Q |
248 |
cgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatcta |
331 |
Q |
| |
|
|| |||| || |||||||| ||| | ||||| ||||||||||| || |||||| |||||| || || | |||||||||||||| |
|
|
| T |
8646731 |
cgatgaacagatccatattgattgcgtcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaataaagaatcta |
8646814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 205 - 302
Target Start/End: Complemental strand, 8586063 - 8585966
Alignment:
| Q |
205 |
atctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaaga |
302 |
Q |
| |
|
||||| ||||| |||||||||||| |||||| | |||||||| || |||||||||||||| ||||||||||||||| |||| || || |||||||| |
|
|
| T |
8586063 |
atcttagaatcggtaagacaactctcaacagtatttatacactcattaaaaaggtccatattgatttcctcaaacttgacacgcgtgattgatgaaga |
8585966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 187
Target Start/End: Complemental strand, 8017911 - 8017788
Alignment:
| Q |
64 |
gcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcactttgggaatcctcgatg |
163 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| | || || | || || || |||||||| || | || ||||||||||| || | || |
|
|
| T |
8017911 |
gcaccataagcaacagcctcgtctgggttgatactcttgcaaagctctttaccattgaagaaatcttgcaacagttgctgaactttgggaattctagttg |
8017812 |
T |
|
| Q |
164 |
aaccacccacaagaacaacatcat |
187 |
Q |
| |
|
|||| || |||||||||||||||| |
|
|
| T |
8017811 |
aaccgccaacaagaacaacatcat |
8017788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 8664159 - 8664228
Alignment:
| Q |
218 |
taagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgag |
289 |
Q |
| |
|
|||||||||||| ||||||||||| |||| ||||||||| |||||||| ||||| ||| |||||||||||| |
|
|
| T |
8664159 |
taagacaactctcaacagtttccaaacac--gttgaaaagatccatattgatttcatcatacttggcacgag |
8664228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 27846620 - 27846555
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatcctt |
113 |
Q |
| |
|
||||||||| | |||||| ||| |||||||||||||||| |||||||| |||||| ||| |||||| |
|
|
| T |
27846620 |
agcagcctgcacagctgctccaaaagcaacagcctcatcagggttgatgctcttgtacatatcctt |
27846555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 8664919 - 8664971
Alignment:
| Q |
253 |
aaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaa |
305 |
Q |
| |
|
|||||||||||||| |||||||||||| | |||||||| || |||||| |||| |
|
|
| T |
8664919 |
aaaaggtccatattgatttcctcaaacctcgcacgagttattgatgaacaaaa |
8664971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 39985292 - 39985356
Alignment:
| Q |
40 |
ctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgca |
104 |
Q |
| |
|
||||| ||||||||||| | ||| |||||||| |||||||||||||| || || || |||||||| |
|
|
| T |
39985292 |
ctcaagatagcagcctgaacagcagcaccatatgcaacagcctcatcaggatttatgctcttgca |
39985356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 23 - 339
Target Start/End: Complemental strand, 9336430 - 9336114
Alignment:
| Q |
23 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
122 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||||| | || | || ||||||| ||| || |
|
|
| T |
9336430 |
cattcttaaagccttcactcaaaatagcagcttgaacagctgcaccataagcaacagcctcatctgggttgatacccatgaataattccttccccttgaa |
9336331 |
T |
|
| Q |
123 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
222 |
Q |
| |
|
||| ||| ||||||| ||||||||||| |||||||| || || |||||||||||||||| ||||||||||| |||| | ||||||||||| || ||| |
|
|
| T |
9336330 |
aaattctagcaatagttcttgcactttcggaatcctagacgagccacccacaagaacaatatcatcaatattactcttgtatatctttgaatccctgaga |
9336231 |
T |
|
| Q |
223 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaata |
322 |
Q |
| |
|
|| | | |||| | | ||||||||| ||||||| |||||| |||| ||||||||| ||||||||||| || |||||||||||||| |||||| ||||| |
|
|
| T |
9336230 |
caggtgtcaacaatattcatacactcattgaaaaagtccatgttaagttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaata |
9336131 |
T |
|
| Q |
323 |
aagaatctacctcaaca |
339 |
Q |
| |
|
||| ||||||||||||| |
|
|
| T |
9336130 |
aagcatctacctcaaca |
9336114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 23 - 339
Target Start/End: Original strand, 30774881 - 30775197
Alignment:
| Q |
23 |
cattcttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaa |
122 |
Q |
| |
|
||||||||| ||||| ||||| | ||||||||||| |||||| || | |||||| |||||||| || ||||| ||||||||||||||||||| || || |
|
|
| T |
30774881 |
cattcttaatgccttcactcaatagagcagcctggacagctgccccgtgagcaactgcctcatcaggattgatgctcttgcacaaatccttcccattgaa |
30774980 |
T |
|
| Q |
123 |
aaagtcttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaaga |
222 |
Q |
| |
|
|| | ||||||| || ||||||||||||||||| || |||||||| |||||||||| |||||| | | |||| | | |||||||||| ||||| |
|
|
| T |
30774981 |
gaaattacgcaatagttcctgcactttgggaatcctagaagaaccaccgacaagaacaatatcatctacactactcttgtctacctttgaatcagtaaga |
30775080 |
T |
|
| Q |
223 |
caactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaata |
322 |
Q |
| |
|
||||||| |||||| | |||||||| || |||||||||||||| ||||||||||||||| ||||||| || |||||||||||||| || | ||||||| |
|
|
| T |
30775081 |
caactctcaacagtctgtatacactcattaaaaaggtccatattgatttcctcaaacttgacacgagtgattgatgaagaaaagtcaatgtcttgaaata |
30775180 |
T |
|
| Q |
323 |
aagaatctacctcaaca |
339 |
Q |
| |
|
|| ||||| ||||||| |
|
|
| T |
30775181 |
aattatctatctcaaca |
30775197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 337
Target Start/End: Original strand, 35132110 - 35132400
Alignment:
| Q |
48 |
agcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagatcttgcact |
147 |
Q |
| |
|
||||||||| | ||||| |||||||| ||||||||||| ||||| || ||||||||||| ||||||| || ||||||| ||||||||| | |||||| |
|
|
| T |
35132110 |
agcagcctgaactgctgccccataagctacagcctcatcggggttaatgctcttgcacaactccttccctttgaaaaagttttgcaatagctgctgcact |
35132209 |
T |
|
| Q |
148 |
ttgggaatcctcgatgaaccacccacaagaacaacatcatc-aatatcactcccgcgcatctttgaatcactaagacaactcttaacagtttccatacac |
246 |
Q |
| |
|
||||||||||| || || || || ||||||||||||||||| | | ||| | |||||| | |||| | |||||||||| || || | ||||||| |
|
|
| T |
35132210 |
ttgggaatcctagaagaccctccaacaagaacaacatcatctacccttgctcttgtccatcttagcatcaatgagacaactctctacggtattcatacac |
35132309 |
T |
|
| Q |
247 |
tcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaatctacctcaa |
337 |
Q |
| |
|
|| || |||||||| ||| ||||||||||||||||| ||| | || ||||||||||| || || || ||||||||||||||||| |||| |
|
|
| T |
35132310 |
tcattaaaaaggtctgcattcatttcctcaaacttggcgcgattgattgatgaagaaaaatcaatgccttgaaataaagaatctacttcaa |
35132400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 190
Target Start/End: Complemental strand, 23597109 - 23596957
Alignment:
| Q |
38 |
cgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
137 |
Q |
| |
|
|||||||||||||||| |||| || || |||||||||||||||||||| |||||||| ||||| || | ||||||| || || || |||||||| || |
|
|
| T |
23597109 |
cgctcaaaatagcagcttggactgcagcgccataagcaacagcctcatcagggttgatgctcttacaaagttccttcccattgaagaaatcttgcaaaag |
23597010 |
T |
|
| Q |
138 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaa |
190 |
Q |
| |
|
| ||| || ||||||||||| | || || || ||||||||||||||||||| |
|
|
| T |
23597009 |
ttgttgaaccttgggaatcctagtcgatccgccaacaagaacaacatcatcaa |
23596957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 187
Target Start/End: Complemental strand, 23588255 - 23588108
Alignment:
| Q |
40 |
ctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatagat |
139 |
Q |
| |
|
|||||||||||||| |||| ||||| ||||| |||||||| ||||| |||||||| ||||| || | ||||| | || || || |||||||| || | |
|
|
| T |
23588255 |
ctcaaaatagcagcttggacggctgccccatatgcaacagcttcatcggggttgatgctcttacaaagctcctttccattgaagaaatcttgcaaaagtt |
23588156 |
T |
|
| Q |
140 |
cttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
187 |
Q |
| |
|
||| || ||||||||||| | || ||||| |||||||||||||||| |
|
|
| T |
23588155 |
gttgaaccttgggaatcctagtggatccaccaacaagaacaacatcat |
23588108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 54396067 - 54396216
Alignment:
| Q |
38 |
cgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgcaatag |
137 |
Q |
| |
|
|||||||||| || || || | ||| ||||||||||||||||| ||||| ||||| ||||||||||| | || |||| || || || || ||||| || |
|
|
| T |
54396067 |
cgctcaaaatcgctgcttgaacagcagcaccataagcaacagcttcatcagggttaatactcttgcaaagctctttcccattgaagaaatcctgcaaaag |
54396166 |
T |
|
| Q |
138 |
atcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcat |
187 |
Q |
| |
|
| ||| ||||| |||||||| | ||| ||||| ||||||||||| |||| |
|
|
| T |
54396167 |
ctgttgaacttttggaatccttgttgatccaccaacaagaacaacttcat |
54396216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 28 - 337
Target Start/End: Original strand, 43744450 - 43744759
Alignment:
| Q |
28 |
ttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagt |
127 |
Q |
| |
|
||||| ||||| ||||| | ||||||||| | |||||||||| |||||| |||||||| ||||| || |||| ||||||||||||| |||||| | |
|
|
| T |
43744450 |
ttaaagccttcactcaacaaagcagcctgcacagctgcaccaatagcaactgcctcatcagggttaatgttcttacacaaatccttccctgcaaaaaatt |
43744549 |
T |
|
| Q |
128 |
cttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaact |
227 |
Q |
| |
|
| |||||||| | ||| ||||| |||||||| || || ||||| |||||||||||||||| ||| | ||| | |||||| | |||| |||||||||| |
|
|
| T |
43744550 |
cctgcaatagttgttgtacttttggaatcctagaggagccaccaacaagaacaacatcatgtatagcgctcttgtccatcttggcatcagtaagacaact |
43744649 |
T |
|
| Q |
228 |
cttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaa |
327 |
Q |
| |
|
|| |||| ||| || |||||||||||| || |||||||| |||||||||||||| | |||||| || | || | | || || || |||| |||||||||| |
|
|
| T |
43744650 |
ctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagtacgagtgattgttgtaaagaaatcaatgccctcaaataaagaa |
43744749 |
T |
|
| Q |
328 |
tctacctcaa |
337 |
Q |
| |
|
|||||||||| |
|
|
| T |
43744750 |
tctacctcaa |
43744759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 188
Target Start/End: Original strand, 12528144 - 12528298
Alignment:
| Q |
34 |
ccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagtcttgca |
133 |
Q |
| |
|
||||| ||||| | ||||||||| | ||| ||||||||||||||||||||||| |||||||| |||||| | || ||||| | ||| ||||| || |||| |
|
|
| T |
12528144 |
ccttcactcaacaaagcagcctgaacagcggcaccataagcaacagcctcatcagggttgatgctcttgtataactccttgcccttgaaaaactcctgca |
12528243 |
T |
|
| Q |
134 |
atagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatc |
188 |
Q |
| |
|
|||| | | ||||||||||||||| || || ||||| ||||| |||| |||||| |
|
|
| T |
12528244 |
atagctgcttcactttgggaatcctagacgagccaccaacaagtacaatatcatc |
12528298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 28 - 337
Target Start/End: Original strand, 28219552 - 28219861
Alignment:
| Q |
28 |
ttaaaaccttcgctcaaaatagcagcctggatagctgcaccataagcaacagcctcatctgggttgatactcttgcacaaatccttccgcttaaaaaagt |
127 |
Q |
| |
|
||||| ||||| ||||| | ||||||||| | ||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||| |||||| | |
|
|
| T |
28219552 |
ttaaagccttcactcaacaaagcagcctgcacagctgcaccataagcaacagcctcatcagggttaatgctcttacacaattccttccctccaaaaaatt |
28219651 |
T |
|
| Q |
128 |
cttgcaatagatcttgcactttgggaatcctcgatgaaccacccacaagaacaacatcatcaatatcactcccgcgcatctttgaatcactaagacaact |
227 |
Q |
| |
|
| |||| ||| | ||| ||||| ||||| || || || || || |||||||||||||| | | | | ||| | ||| || | |||| | ||||| || |
|
|
| T |
28219652 |
cctgcagtagttgttgtacttttggaattctagaggagcctccaacaagaacaacatcgtgtacagccctcttgtccatattggcatcagtgagacacct |
28219751 |
T |
|
| Q |
228 |
cttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaagtctattccctgaaataaagaa |
327 |
Q |
| |
|
|| |||||||| || |||||| |||||||| |||||||| |||||||||||||| ||||||||||| |||||| | || || || || | |||||||||| |
|
|
| T |
28219752 |
ctcaacagttttcaaacactcattgaaaagatccatattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaagaa |
28219851 |
T |
|
| Q |
328 |
tctacctcaa |
337 |
Q |
| |
|
|||||||||| |
|
|
| T |
28219852 |
tctacctcaa |
28219861 |
T |
|
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