View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18785_low_4 (Length: 369)
Name: NF18785_low_4
Description: NF18785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18785_low_4 |
 | |
|
| [»] scaffold0016 (2 HSPs) |
| | |
|
| [»] scaffold0130 (1 HSPs) |
| | |
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| [»] scaffold0022 (1 HSPs) |
| | |
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| [»] scaffold0319 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0107 (2 HSPs) |
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| [»] scaffold0019 (2 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0008 (1 HSPs) |
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| [»] scaffold0183 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 316; Significance: 1e-178; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 21 - 364
Target Start/End: Original strand, 23200494 - 23200837
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23200494 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
23200593 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
23200594 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatcccgtgaa |
23200693 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
23200694 |
attcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaac |
23200793 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
23200794 |
acagccttctgcttaccctctgttttgtcaacattggtgatgtc |
23200837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 21 - 364
Target Start/End: Complemental strand, 22638647 - 22638304
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22638647 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacgaaat |
22638548 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22638547 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaa |
22638448 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
22638447 |
attcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaac |
22638348 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| | ||||||| |
|
|
| T |
22638347 |
acagccttctgcttaccctctgttttatcaacatcggtgatgtc |
22638304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 29 - 364
Target Start/End: Original strand, 23626131 - 23626466
Alignment:
| Q |
29 |
tttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttca |
128 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23626131 |
tttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagcggcttgtgagttgccatttcatcgacgaaatcactttca |
23626230 |
T |
|
| Q |
129 |
acttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaag |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
23626231 |
acttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaag |
23626330 |
T |
|
| Q |
229 |
tcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacacagcctt |
328 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| || |
|
|
| T |
23626331 |
tcatttctacatcctccttgggatgatcttttttcaatattgacaatgggggcgagattctctctgttgctggtttcttaaccattttgaacacagcttt |
23626430 |
T |
|
| Q |
329 |
ttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| |
|
|
| T |
23626431 |
ctgcttaccctctgttttgtcaacattggtgatgtc |
23626466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 24 - 325
Target Start/End: Complemental strand, 24912223 - 24911923
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| || ||||| |||| |
|
|
| T |
24912223 |
tctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgcgtcgccatttcgtcaacgaagtcac |
24912124 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||| | || || || ||||||||||| |||||||||||||| ||||||||||| |||||||| |
|
|
| T |
24912123 |
tttcaacttcattaacttctgactgaacgtcgtattccacagatagaattgataccacattgcatactatgtcgagactggggtcagatccagtgaaatt |
24912024 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||| |||||||| || ||||| || |||||||| ||||| || ||||||| ||||| || ||| |||||||||||||| ||| |
|
|
| T |
24912023 |
tgaagtcatttcttcatcctctttgggatggtccttctttaagattgacaa-gggggtgaaattctctttgttgctggttttttaaccatttcgaaaaca |
24911925 |
T |
|
| Q |
324 |
gc |
325 |
Q |
| |
|
|| |
|
|
| T |
24911924 |
gc |
24911923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 23813889 - 23813977
Alignment:
| Q |
45 |
tgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttc |
133 |
Q |
| |
|
||||| ||||| ||||||||||| ||||| ||||| ||||||| ||| || | | | |||||||||||| ||| |||||||| ||||| |
|
|
| T |
23813889 |
tgttgatcttcgacacaaccattgttcataacatagtagcataatggcttctaaatagccatttcatcggtgaattcactttccacttc |
23813977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 304; Significance: 1e-171; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 13 - 364
Target Start/End: Complemental strand, 23435442 - 23435091
Alignment:
| Q |
13 |
tcatcaacgtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatc |
112 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |
|
|
| T |
23435442 |
tcatcgacgtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagagaattgtgagttaccatttcatc |
23435343 |
T |
|
| Q |
113 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagat |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23435342 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaagatagaaaccacattgcacactatgtcgagactagggtcagat |
23435243 |
T |
|
| Q |
213 |
cccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaacca |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| |
|
|
| T |
23435242 |
cccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctattgctggtttcttaacca |
23435143 |
T |
|
| Q |
313 |
tttcgaacacagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
23435142 |
tttcgaacacaaccttctgcttaccctctgttttgtcaacattggtgatgtc |
23435091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 24 - 364
Target Start/End: Original strand, 19035046 - 19035386
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||| |
|
|
| T |
19035046 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcataatggcttgtgaattgccatttcatcgacgaagtcac |
19035145 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| |||| ||| || ||||||||||| | || || ||||| ||||||||||| |||||||| |
|
|
| T |
19035146 |
tttcaacttcattaatttctgactgcacgtcgtattccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagatccagtgaaatt |
19035245 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||| ||||||| || ||||||||||||||||||||| | |||||||||||||||| || ||| ||||| |||||||||| | |
|
|
| T |
19035246 |
cgaagtcatttcttcatcctttttgggattatttttcttcaaaattgacaatggagatgagattctctctgttgctggttttttaactatttcgaacata |
19035345 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|| |||||||| |||||| ||||||||||||| ||||||| |
|
|
| T |
19035346 |
gctttttgcttgccctctcctttgtcaacattggtgatgtc |
19035386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 292; Significance: 1e-164; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 21 - 364
Target Start/End: Original strand, 126424 - 126767
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
126424 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggattgtgagttgccatttaatcgacgaaat |
126523 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
126524 |
cactttcaacttcgttaatttctgactaaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatccagtgaa |
126623 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
126624 |
attcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaac |
126723 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||| | ||||||| |
|
|
| T |
126724 |
acagccttctgcttaccctctgttttatcaacatcggtgatgtc |
126767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 42 - 313
Target Start/End: Original strand, 179176 - 179447
Alignment:
| Q |
42 |
gcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaattt |
141 |
Q |
| |
|
|||||||| ||||| ||||||||||| || || ||||||||||||||||| ||||| | |||||| ||| || |||||||| |||||||||| || |
|
|
| T |
179176 |
gcatgttgatcttcgacacaaccattgtttataacataatagcatagtggcttgtggataatcatttcgtcggtaaagtcactttctacttcgttaactt |
179275 |
T |
|
| Q |
142 |
ctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatc |
241 |
Q |
| |
|
|||| ||||||| || || || || || | || ||||||||||||||||| |||| || |||||||| | ||||||||| |||||||||||||| |
|
|
| T |
179276 |
ctgaaggaacgtcatactcaacaggcaacactgagaccacattgcacactatatcgaagcttgggtcagacttggagaaattcgacgtcatttcttcatc |
179375 |
T |
|
| Q |
242 |
ctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccat |
313 |
Q |
| |
|
||| || ||||| |||||||||||||||||||| || || |||||||| ||||| | |||||| |||||||| |
|
|
| T |
179376 |
ctctttaggatggtctttcttcaaaattgacaaaggaggggagattctttctgtggctgattttttaaccat |
179447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 21 - 364
Target Start/End: Complemental strand, 43474 - 43131
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
43474 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagcgccttgtgagtttccatttcatcgacgaaat |
43375 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43374 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaggatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
43275 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| |
|
|
| T |
43274 |
attcgaagtcagttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccattttgaac |
43175 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
43174 |
acagctttctgcttaccctctgttttatcaacattggtgatgtc |
43131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 21 - 356
Target Start/End: Original strand, 18171499 - 18171834
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
18171499 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacgaaat |
18171598 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| |
|
|
| T |
18171599 |
cactttgcacttcgttaatttctgactgaacgttgtattccaccagtaggatagaaaccacattgtacactatgtcgagactagggtcagatccagtgaa |
18171698 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| || ||| ||||||||||||||| |
|
|
| T |
18171699 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaagattgacaatgggggcgaaattctttctgttgctggttttttaaccatttcgaac |
18171798 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattg |
356 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||| |
|
|
| T |
18171799 |
acagctttctgcttaccctctcctttgtcaacattg |
18171834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 42 - 351
Target Start/End: Original strand, 14342542 - 14342851
Alignment:
| Q |
42 |
gcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaattt |
141 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| |||| ||||| ||||| | |
|
|
| T |
14342542 |
gcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacaaagtcattttccacttcattaatct |
14342641 |
T |
|
| Q |
142 |
ctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatc |
241 |
Q |
| |
|
||||||| || ||||||||||| || | ||| |||||||||||||| ||||||||||| || ||||||||| |||||||||| |||||||| || ||||| |
|
|
| T |
14342642 |
ctgactggacatcgtattccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatc |
14342741 |
T |
|
| Q |
242 |
ctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacacagccttttgcttaccctct |
341 |
Q |
| |
|
||| |||| | ||||||||||||||||||||||||||| || ||||| | ||||| || |||||||||||||||||||||||| || |||||| |||| |
|
|
| T |
14342742 |
ctctttggaacaatctttcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgcttatcctcc |
14342841 |
T |
|
| Q |
342 |
gttttgtcaa |
351 |
Q |
| |
|
|||| ||||| |
|
|
| T |
14342842 |
gtttggtcaa |
14342851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 18133578 - 18133743
Alignment:
| Q |
199 |
gactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgt |
298 |
Q |
| |
|
|||| ||||||||| |||||||||| |||||||| || ||||| || |||| | |||||||||||| ||||||||||||||| || |||| |||||||| |
|
|
| T |
18133578 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
18133677 |
T |
|
| Q |
299 |
tgatttcttaaccatttcgaacacagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|| |||||||||||| ||||||||| | |||||||| ||||| ||||||||| |||| ||||||| |
|
|
| T |
18133678 |
tggtttcttaaccatctcgaacacaactttttgcttgccctcccttttgtcaatattggtgatgtc |
18133743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 21 - 364
Target Start/End: Complemental strand, 11690 - 11347
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| |
|
|
| T |
11690 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaactattattcatgacataatagcatagtggcttgttaattgccatttcatcgacgaaat |
11591 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||||| |||||||||||||||| | ||||| |
|
|
| T |
11590 |
cactttcaacttcgttaatttctgactgaacgtcatattccataggtaggatagaaaccacattgcatactatgttgagactagggtcagattcagtgaa |
11491 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||||||| |
|
|
| T |
11490 |
atttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggttttttaaccatttcgaac |
11391 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
11390 |
acagctttctgcttaccctctgttttgtcaacattggtgatgtc |
11347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 21 - 364
Target Start/End: Original strand, 13289232 - 13289575
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| |
|
|
| T |
13289232 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagtggcttgtgaattgacatttcatcgacgaaat |
13289331 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
13289332 |
cactttcaacttcgttaatttctgaatgaacgtcatattccaaaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaa |
13289431 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || || ||||||||||||||| |
|
|
| T |
13289432 |
attcgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggctttttaaccatttcgaac |
13289531 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||| ||||||| |
|
|
| T |
13289532 |
acagctttctgcttaccctctcctttgtcaacattggtgatgtc |
13289575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 23 - 325
Target Start/End: Original strand, 14772434 - 14772736
Alignment:
| Q |
23 |
gtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatca |
122 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||| |
|
|
| T |
14772434 |
gtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgaagtca |
14772533 |
T |
|
| Q |
123 |
ctttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaat |
222 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||| |||| ||| || ||||||||||| ||||| |||||||| ||||||||||| ||||||| |
|
|
| T |
14772534 |
ctttcaacttcattaacttctgactgaacgtcgtattccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagatccagtgaaat |
14772633 |
T |
|
| Q |
223 |
tcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacac |
322 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||| || ||| |||||||||||||| || |
|
|
| T |
14772634 |
ttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatac |
14772733 |
T |
|
| Q |
323 |
agc |
325 |
Q |
| |
|
||| |
|
|
| T |
14772734 |
agc |
14772736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 266
Target Start/End: Original strand, 18562450 - 18562671
Alignment:
| Q |
45 |
tgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctg |
144 |
Q |
| |
|
||||| ||||| ||||||||||||||||| ||||| ||||||| ||| || ||| | ||||||||||| | ||| |||||||| ||||| || | || | |
|
|
| T |
18562450 |
tgttgatcttcgacacaaccattattcataacatagtagcataatggcttatgaatagccatttcatcaatgaagtcactttccacttcattgacctccg |
18562549 |
T |
|
| Q |
145 |
actgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctc |
244 |
Q |
| |
|
| |||| |||||||| || ||| | || || |||||||| | |||||||||||| ||||||||| | | || || || |||||||||||||| || |
|
|
| T |
18562550 |
aaggaacatcgtattcgactagtagcactgacacgacattgcatattatgtcgagactcgggtcagattcagaaaagtttgacgtcatttcttcatcttc |
18562649 |
T |
|
| Q |
245 |
cttgggatgatctttcttcaaa |
266 |
Q |
| |
|
||| ||| |||||||||||||| |
|
|
| T |
18562650 |
ctttggaggatctttcttcaaa |
18562671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 24 - 364
Target Start/End: Complemental strand, 9966 - 9626
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||| |||||||||| ||||||||||||| |
|
|
| T |
9966 |
tctggtttttcaaagactgcatgttgctcttctacgcaaccgttattcatgacataataacatagtggcttgtgaattgccatttcgtcgacgaaatcac |
9867 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
9866 |
tttcaacttcgttaatttctgattgaacgtcgtattccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaatt |
9767 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||| || || |||||||||||||||||| |
|
|
| T |
9766 |
tgaagtcatttcttcatcctctttgggatgttctttctttaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacaca |
9667 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|| || |||||||||||| ||||||||||||| ||||||| |
|
|
| T |
9666 |
gctttctgcttaccctctcctttgtcaacattggtgatgtc |
9626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 24 - 364
Target Start/End: Original strand, 17422722 - 17423062
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
17422722 |
tctggtttttcgaagactgcatgttgctcttctacacaaccattattcatgacataagagcatagtggcttgtgggttgccatttcatcgacgaaatcac |
17422821 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||| |||| ||||||||||||||| || ||||||||||| |||| |||||||||||||||||| ||||||||||| || |||||||||||||||||||| |
|
|
| T |
17422822 |
tttccactttgttaatttctgactggacatcgtattccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagatcccgtgaaatt |
17422921 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
||||||||| || |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
17422922 |
cgaagtcatctcctcatcctctttgggatgatctttcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacc |
17423021 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
| || |||||| |||| ||||||||||||||| ||||||| |
|
|
| T |
17423022 |
tctttctgcttatcctccgttttgtcaacattggtgatgtc |
17423062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 24 - 364
Target Start/End: Original strand, 22348632 - 22348972
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||| |
|
|
| T |
22348632 |
tctggtttttcaaagacagcatgttgttcctctacacaaccattattcataacataatagcatagtggcttgtgagttgccatttcgtcgacgaagtcac |
22348731 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||| ||| |||| ||| |||||||||||||| || || || ||||| ||||||||||| ||||||| |
|
|
| T |
22348732 |
tttcaacttcattaacttctgactgaacgtcgtatttcacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagatccaatgaaatt |
22348831 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| || ||| |||||||||||||||||| |
|
|
| T |
22348832 |
tgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggtgagattctctctattgctggttttttaaccatttcgaacaca |
22348931 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
| || ||||| || | ||||||||||||| ||||||| |
|
|
| T |
22348932 |
actttctgcttgcctttccctttgtcaacattggtgatgtc |
22348972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 42 - 325
Target Start/End: Complemental strand, 1735606 - 1735323
Alignment:
| Q |
42 |
gcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaattt |
141 |
Q |
| |
|
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||| | |
|
|
| T |
1735606 |
gcatgttgttcttccacacagccattattcatgacataatagcatagtggtttgtgagttgccatctcatcgacgaagtcactttcgacttcattaatat |
1735507 |
T |
|
| Q |
142 |
ctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatc |
241 |
Q |
| |
|
||||||| || ||||||||||| || ||||| ||||||||||| || |||||||| ||||| ||||||||| |||||||||| |||||||| || || || |
|
|
| T |
1735506 |
ctgactggacatcgtattccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcgtc |
1735407 |
T |
|
| Q |
242 |
ctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacacagc |
325 |
Q |
| |
|
|| || | |||||||||||||| ||||||||||||||| || |||| ||||||| || ||||||||||| ||||||||||| |
|
|
| T |
1735406 |
ttcttttgaatgatctttcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaaccatctcgaacacagc |
1735323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 24 - 289
Target Start/End: Complemental strand, 22068088 - 22067824
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
|||||| ||||||| || ||||| |||||||| ||||| ||||| ||||||||||||||||||| ||| || || | ||||||| |||| ||| |||| |
|
|
| T |
22068088 |
tctggtctttcaaaaacggcatgctgctcttcaacacagccattgttcatgacataatagcataatggcttatggatggccattttgtcgatgaagtcac |
22067989 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||| ||| |||||||||||||||||||| || || | || ||||||||||||||||| |||||||| ||||||||||| |||||||| |
|
|
| T |
22067988 |
tttcaacttcattaacttccgactgaacgtcgtattccacaggaaaaactgacaccacattgcacactatatcgagact-gggtcagatccagtgaaatt |
22067890 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattct |
289 |
Q |
| |
|
|||||||||||||||||||||||| |||||| || ||||||||||||| || || || |||||||| |
|
|
| T |
22067889 |
cgaagtcatttcttcatcctccttaggatgacctctcttcaaaattgataagggaggggagattct |
22067824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 21 - 361
Target Start/End: Complemental strand, 10151117 - 10150777
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
10151117 |
gtgtctgatttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgatgaaat |
10151018 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||| |||||||| |||| ||||||||||||||||| |||||||| ||||| ||||||||||| ||||| |
|
|
| T |
10151017 |
cactttcaacttcattaatttctgacggaacgtcatattccacaggtagtatagaaaccacattgcatactatgtcaagactggggtcagatccagtgaa |
10150918 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||| |
|
|
| T |
10150917 |
atttgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggtgagattctctctgtgactggttttttaaccatttcgaac |
10150818 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgat |
361 |
Q |
| |
|
||| | ||| |||| |||||| ||||||||||||| |||| |
|
|
| T |
10150817 |
acatcttttcgcttgccctctcctttgtcaacattggtgat |
10150777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 77 - 363
Target Start/End: Original strand, 13306797 - 13307082
Alignment:
| Q |
77 |
ataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaa |
176 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
13306797 |
ataatagcacagtggcttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctaactgaacatcgtattccaccggtaggatagaa |
13306896 |
T |
|
| Q |
177 |
accacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatg |
276 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
13306897 |
accacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgggatgatctttcttcaaaattgacaatg |
13306996 |
T |
|
| Q |
277 |
ggggcgagattctctctgttgttgatttcttaaccatttcgaacacagccttttgcttaccctctgttttgtcaacattgatgatgt |
363 |
Q |
| |
|
|||| |||||||||||||||| || ||||||||||||||||||||||| || |||||| ||| |||||| | ||||||| |||||| |
|
|
| T |
13306997 |
ggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgcttatcctgtgttttat-aacattggtgatgt |
13307082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 24 - 364
Target Start/End: Original strand, 14693094 - 14693434
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
|||||||| || || || |||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||| |
|
|
| T |
14693094 |
tctggtttctcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagtttccatttcatcgacgaagtcaa |
14693193 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||||||| || |||||||||||||||||||| ||||||||||| | ||||||||| |||||||||| |
|
|
| T |
14693194 |
tttcaacttcattaatttctgactggacatcgtattccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattccgtgaaatt |
14693293 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||| || | |||||| |||| ||| ||||||||||| |||||||||||||| || ||||||||||||| || ||| ||||||||||||||||| |
|
|
| T |
14693294 |
tgaagtcatctccttatcctctttggaatggtctttcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatttcgaacacg |
14693393 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|| || ||||| |||| |||||||||| |||| ||||||| |
|
|
| T |
14693394 |
gctttctgcttgtcctccgttttgtcaatattggtgatgtc |
14693434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 24 - 351
Target Start/End: Original strand, 7401854 - 7402181
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||| || ||||| || |||||||| ||||| || || ||||||||||||||||||||||||||||| |||||| |||||||||||||||| || |||| |
|
|
| T |
7401854 |
tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac |
7401953 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||| ||||| ||||| |||||||| || ||||||||| | || | ||| |||||||||||||| |||||||||||||| |||||| || |||||||||| |
|
|
| T |
7401954 |
tttccacttcattaatctctgactggacatcgtattcctcaggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatt |
7402053 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||| || |||||||| |||| | || ||||||||||||||||||||||| || ||||| ||||||| || ||||||||||||||||||||| |
|
|
| T |
7402054 |
tgaagtcatctcctcatcctctttggaacaatacttcttcaaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacaca |
7402153 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaa |
351 |
Q |
| |
|
|| || || ||| |||| ||||||||| |
|
|
| T |
7402154 |
gctttctgtttatcctccattttgtcaa |
7402181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 42 - 334
Target Start/End: Complemental strand, 10782465 - 10782173
Alignment:
| Q |
42 |
gcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaattt |
141 |
Q |
| |
|
|||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| ||||||| |
|
|
| T |
10782465 |
gcatgttgttcttccacacagtcattattcatgacataatagcacagtggtttgtgagttgccatctcatcgacaaaatcactttcggcttcattaattt |
10782366 |
T |
|
| Q |
142 |
ctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatc |
241 |
Q |
| |
|
||||||| || || |||||||| || || || ||||||||||| || |||||||| ||||| ||||||||| | |||||||||||||||||||| ||||| |
|
|
| T |
10782365 |
ctgactggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagattctgtgaaattcgaagtcatttcctcatc |
10782266 |
T |
|
| Q |
242 |
ctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacacagccttttgctt |
334 |
Q |
| |
|
|| || |||||||||||| ||| ||| |||||||||||||| |||| |||||||| || ||||||||||| || |||||||| || ||||| |
|
|
| T |
10782265 |
ttcttttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaaccatctcaaacacagctttctgctt |
10782173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 7365311 - 7365433
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||| || ||||| || |||||||| ||||| || || ||||||||||||||||||||||||||||| |||||| |||||||||||||||| || |||| |
|
|
| T |
7365311 |
tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac |
7365410 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgac |
146 |
Q |
| |
|
|||| ||||| ||||| |||||| |
|
|
| T |
7365411 |
tttccacttcattaatctctgac |
7365433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 94
Target Start/End: Original strand, 20169237 - 20169289
Alignment:
| Q |
42 |
gcatgttgctcttctacacaaccattattcatgacataatagcatagtggttt |
94 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||| |||| |||||| |
|
|
| T |
20169237 |
gcatgttgctactctacacaaccattattcataacataataacatattggttt |
20169289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 21 - 364
Target Start/End: Complemental strand, 29951 - 29608
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| |
|
|
| T |
29951 |
gtgtctggtttttctaagactgcatgatgctcttctacataaccattattcatgacataatagcatagtggcttgtgaatttccatttcatcgacgaaat |
29852 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| || || ||||||||||| ||||| |
|
|
| T |
29851 |
cactttcaacttcattaatttctgactgaacgtcgtattccactggtaggatagaaaccacattgcatactatgtctaggctggggtcagatccggtgaa |
29752 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|| || ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| | | || ||| ||||||||||||||| |
|
|
| T |
29751 |
atctgaggtcatttcttcatcctctttgggatgatctttcttcaaaattgacaacgggggtgagattctctctatggctggttttttaaccatttcgaac |
29652 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
||| | |||||||| |||| | ||||||||| |||| ||||||| |
|
|
| T |
29651 |
acatctttttgcttgccctttcttttgtcaatattggtgatgtc |
29608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 21 - 364
Target Start/End: Complemental strand, 26537 - 26194
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
26537 |
gtgtctggtttttcaaatactgcatgttgctcttccacacatccgttattcatgacataataacatagtggtttgtgagtttccatttcgtcgacgaaat |
26438 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| |||||||| |||| ||| || ||||| ||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
26437 |
cactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatccagtgaa |
26338 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|||||||||||| ||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||| |
|
|
| T |
26337 |
attcgaagtcatctcttcatcctccttgagagagtctttcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaac |
26238 |
T |
|
| Q |
321 |
acagccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
||||| || || ||| ||||| ||||||||||||| ||||||| |
|
|
| T |
26237 |
acagctttctgtttatcctctcctttgtcaacattggtgatgtc |
26194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 325
Target Start/End: Original strand, 37458 - 37762
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
37458 |
gtgtctggtttttcaaatactgcatgttgctcttccacacatccattattcatgacataataacatagtggtttgtgagtagccatttcgtcgacgaaat |
37557 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| |||||||| |||| |||||| ||||| || || |||||||||||||||||||||||||| ||||| |
|
|
| T |
37558 |
cactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagatccagtgaa |
37657 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||| || || ||||||||||||||| |
|
|
| T |
37658 |
attcgaagtcatatcttcatcctccttgggaaagtctttcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaaccatttcgaac |
37757 |
T |
|
| Q |
321 |
acagc |
325 |
Q |
| |
|
||||| |
|
|
| T |
37758 |
acagc |
37762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 24 - 356
Target Start/End: Original strand, 126628 - 126960
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
|||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||| |
|
|
| T |
126628 |
tctggtttttcaaatacggcgtgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtcgatgaagtcac |
126727 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
||||||||||||||| ||| |||| ||||||||||||||| |||| ||| || ||||||||||| || || || ||||| |||||||||||||||||||| |
|
|
| T |
126728 |
tttcaacttcgttaacttccgactaaacgtcgtattccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagatcccgtgaaatt |
126827 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
126828 |
tgaagtcatttcttcatcctcattgggatgatctttctttaaaattcacaatgggggtgagattctctctgttgttggttttttaaccatttcgaacacc |
126927 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaacattg |
356 |
Q |
| |
|
|| || ||||| |||| ||||||||||||| |
|
|
| T |
126928 |
gctttctgctttcccttccctttgtcaacattg |
126960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 322
Target Start/End: Complemental strand, 21511319 - 21511018
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||| |||| |
|
|
| T |
21511319 |
gtgtctggtttttcaaagacggcatgttgttcttctacacaaccattattcacgacgtaatagcatagtggcttgtgagttgccatttcgtcgacaaaat |
21511220 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||| |||||||||| ||| ||||||||||||||||||| ||||||| || ||||||||||| | || || ||||| ||||||||||| ||||| |
|
|
| T |
21511219 |
cactttccacttcgttaacttccaactgaacgtcgtattccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagatccagtgaa |
21511120 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || ||| ||||||||||||||| |
|
|
| T |
21511119 |
atttgaagtcatttcttcatcctccttgggatgatctttctttaaaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaac |
21511020 |
T |
|
| Q |
321 |
ac |
322 |
Q |
| |
|
|| |
|
|
| T |
21511019 |
ac |
21511018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 23 - 316
Target Start/End: Original strand, 5405 - 5698
Alignment:
| Q |
23 |
gtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatca |
122 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||| |
|
|
| T |
5405 |
gtctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgaagtca |
5504 |
T |
|
| Q |
123 |
ctttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaat |
222 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||| |||| || || ||||||||||| ||||| |||||||| ||||||||||| ||||||| |
|
|
| T |
5505 |
ctttcaacttcattaacttctgactgaacgtcgtattccacaggtagaattgagaccacattgcatactatatcgagactggggtcagatccagtgaaat |
5604 |
T |
|
| Q |
223 |
tcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttc |
316 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||| || ||| | ||||||||| |
|
|
| T |
5605 |
ttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttc |
5698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 24 - 325
Target Start/End: Complemental strand, 11800 - 11499
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
|||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||| |
|
|
| T |
11800 |
tctggtttttcaaacacagcatgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtcaacgaagtcac |
11701 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||| ||| |||||||||||||||||||| |||| ||| || ||||||||||| || || || ||||| ||||||||||| |||||||| |
|
|
| T |
11700 |
tttcaacttcattaacttccgactgaacgtcgtattccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagatccagtgaaatt |
11601 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||| || ||| |||||||||||||| ||| |
|
|
| T |
11600 |
tgaagtcatttcttcatcctctttgggatgatctttctttataattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaataca |
11501 |
T |
|
| Q |
324 |
gc |
325 |
Q |
| |
|
|| |
|
|
| T |
11500 |
gc |
11499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 23 - 316
Target Start/End: Complemental strand, 67296 - 67003
Alignment:
| Q |
23 |
gtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatca |
122 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||| |
|
|
| T |
67296 |
gtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgaagtca |
67197 |
T |
|
| Q |
123 |
ctttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaat |
222 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||||| |||| ||| || ||||||||||| ||||| |||||||| ||||||||||| ||||||| |
|
|
| T |
67196 |
ctttcaacttcattaacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagactggggtcagatccagtgaaat |
67097 |
T |
|
| Q |
223 |
tcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttc |
316 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||| || ||| | ||||||||| |
|
|
| T |
67096 |
ttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttc |
67003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 21 - 325
Target Start/End: Original strand, 138838 - 139142
Alignment:
| Q |
21 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaat |
120 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||| || |||||||| |||||||| | |
|
|
| T |
138838 |
gtgtctggcttttcaaagacagcatgttgttcttctacacaactattattcatgacataataacatagtggcttgtgtgtcgccatttcgtcgacgaagt |
138937 |
T |
|
| Q |
121 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
220 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||| || |||| ||| |||||||||||||| ||||||||||||||||||||||| || ||||| |
|
|
| T |
138938 |
cactttcaacttcattaacttctgactgaacgtcgtattctacaggtaggattgaaaccacattgcatactatgtcgagactagggtcagacccagtgaa |
139037 |
T |
|
| Q |
221 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaac |
320 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| || |||||||| || || ||||| |||| ||||| || ||| |||||||||||||| |
|
|
| T |
139038 |
attcgaagtcatttcttcatcctctttgggatggtctttctttaagattgacaagggaggtgagatcctctttgttgctggttttttaaccatttcgaat |
139137 |
T |
|
| Q |
321 |
acagc |
325 |
Q |
| |
|
||||| |
|
|
| T |
139138 |
acagc |
139142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 174; Significance: 2e-93; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 36 - 325
Target Start/End: Original strand, 22805718 - 22806007
Alignment:
| Q |
36 |
aagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgt |
135 |
Q |
| |
|
||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||||| |||||||||||||| | |
|
|
| T |
22805718 |
aagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgatgtcactttcaacttcat |
22805817 |
T |
|
| Q |
136 |
taatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttc |
235 |
Q |
| |
|
||| |||||||||||||||||||||||| |||| ||| || ||||||||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| |
|
|
| T |
22805818 |
taacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttc |
22805917 |
T |
|
| Q |
236 |
ttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacacagc |
325 |
Q |
| |
|
||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||| || ||| ||||||||||| || ||||| |
|
|
| T |
22805918 |
ttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagc |
22806007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 41380266 - 41380414
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||| ||||| || || |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
41380266 |
tctggcttttcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcacagtggtttgtgagttgccatctcatcgacgaagtcac |
41380365 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagat |
172 |
Q |
| |
|
|||| ||||| ||||||| |||||| || ||||||||||| || ||||| |
|
|
| T |
41380366 |
tttcgacttcattaatttttgactggacatcgtattccacaggcaagat |
41380414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 251 - 340
Target Start/End: Original strand, 41380418 - 41380507
Alignment:
| Q |
251 |
atgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacacagccttttgcttaccctc |
340 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||| |||||||| || ||||||||||| ||||||||||| || ||||| ||||| |
|
|
| T |
41380418 |
atgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctc |
41380507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 24 - 364
Target Start/End: Complemental strand, 5367 - 5028
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||| || || || |||||||| || ||||| |||| |
|
|
| T |
5367 |
tctggtttttcaaagacagcatgttgttcttccacacaaccattattcatgacataataacatagtggcttatgcgtagccatttcgtcaacgaagtcac |
5268 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||| ||||||| |||||||||||||||| |||| || || ||||||||||| |||||||||||||| |||||||||| |||||||| |
|
|
| T |
5267 |
tttcaacttcattaacttctgacagaacgtcgtattccacaggtagaattgataccacattgcatactatgtcgagactgaggtcagatccagtgaaatt |
5168 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| |||||||||||||||| || || |||||||||||||| ||| |
|
|
| T |
5167 |
cgaagtcatttcttcatcctccttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggctttttaaccatttcgaaaaca |
5068 |
T |
|
| Q |
324 |
gccttttgcttaccctctgttttgtcaacattgatgatgtc |
364 |
Q |
| |
|
|| ||||||| |||| | |||||||| |||| ||||||| |
|
|
| T |
5067 |
gctatttgctt-ccctttcctttgtcaatattggtgatgtc |
5028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 24 - 325
Target Start/End: Complemental strand, 14766 - 14465
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
|||||| |||||||||| |||||||| || || ||||| ||||| ||||||||||||||||||| ||| || || || |||||||| |||| ||| |||| |
|
|
| T |
14766 |
tctggtctttcaaagacagcatgttgttcctcaacacagccattgttcatgacataatagcataatggcttatgggtggccatttcgtcgatgaagtcac |
14667 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||| || || | || || |||||||| | ||| |||||||| |||| |||||| |||||||| |
|
|
| T |
14666 |
tttcaacttcattaacttctgactgaacgtcgtattccacaggcaaaactgacacgacattgcatattatatcgagactggggttagatccagtgaaatt |
14567 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||||||||| || || || |||||||| || || | || ||| |||||||||||||| ||| |
|
|
| T |
14566 |
cgaagtcatttcttcatcctccttaggatgatctctcttcaaaattgataagggaggggagattctttccgtggctggttttttaaccatttcgaaaaca |
14467 |
T |
|
| Q |
324 |
gc |
325 |
Q |
| |
|
|| |
|
|
| T |
14466 |
gc |
14465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 69770 - 69601
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
69770 |
tctggtttttcgaagactggatgttgctcttctacacaaccattattcatgacataatagtacaatggcttgtgagttgccatttcatcgacgaaatcac |
69671 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactat |
193 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| ||||| |
|
|
| T |
69670 |
tttccacttcgttaatttctgactgaacatcgtattccataggtagtatagaaaccacattgcaaactat |
69601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 24 - 271
Target Start/End: Complemental strand, 33874 - 33627
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||||| |||||| || |||||||| ||||| ||||| ||||| ||||||||||||||||||| ||| || || || |||||||| ||| ||| |||| |
|
|
| T |
33874 |
tctggttattcaaaaacagcatgttgttcttcaacacagccattgttcatgacataatagcataatggcttatgtgtcgccatttcgtcggtgaagtcac |
33775 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaatt |
223 |
Q |
| |
|
|||||||||| |||| || |||||||| ||||||||||| || || | || |||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
33774 |
tttcaacttcattaactttcgactgaacatcgtattccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaatt |
33675 |
T |
|
| Q |
224 |
cgaagtcatttcttcatcctccttgggatgatctttcttcaaaattga |
271 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
33674 |
cgaagtcatttcttcatcctctttgggatggtctttcttcaagattga |
33627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 4461 - 4273
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| || ||||| |||| |
|
|
| T |
4461 |
tctggcttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcaacgaagtcac |
4362 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagat |
212 |
Q |
| |
|
|||||||||| |||| |||||| ||||| ||||||||||| ||| ||| || ||| ||||||| |||||||||||||| ||||||||| |
|
|
| T |
4361 |
tttcaacttcattaacttctgattgaacttcgtattccacatgtaggattgataccgcattgcatactatgtcgagactggggtcagat |
4273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 325
Target Start/End: Complemental strand, 2001 - 1883
Alignment:
| Q |
207 |
tcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttct |
306 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||| ||||||||| |||||||| || |||||||| ||||| |||||||||||||||| || ||| | |
|
|
| T |
2001 |
tcagacccagtgaaattcgaagtcatttcttcatcctacttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggttttt |
1902 |
T |
|
| Q |
307 |
taaccatttcgaacacagc |
325 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
1901 |
taaccatttcgaaaacagc |
1883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 84; Significance: 8e-40; HSPs: 2)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 177 - 316
Target Start/End: Original strand, 159086 - 159225
Alignment:
| Q |
177 |
accacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatg |
276 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| || | |
|
|
| T |
159086 |
accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg |
159185 |
T |
|
| Q |
277 |
ggggcgagattctctctgttgttgatttcttaaccatttc |
316 |
Q |
| |
|
| || |||||||| ||||||| || || ||||||||||| |
|
|
| T |
159186 |
gcggtgagattctttctgttgctggctttttaaccatttc |
159225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 156416 - 156560
Alignment:
| Q |
24 |
tctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcac |
123 |
Q |
| |
|
||||| |||||||| || ||||||| ||||| ||||||||||| ||||| |||||||| |||||||| || || || |||||||||| ||||| |||| |
|
|
| T |
156416 |
tctggcttttcaaaaacaacatgttgttcttcaacacaaccattgttcataacataataacatagtggcttatgcgtcaccatttcatcaacgaagtcac |
156515 |
T |
|
| Q |
124 |
tttcaacttcgttaatttctgactgaacgtcgtattccaccggta |
168 |
Q |
| |
|
|||||||||| |||| |||||||||||||| ||||||||| |||| |
|
|
| T |
156516 |
tttcaacttcattaacttctgactgaacgttgtattccacaggta |
156560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 57 - 289
Target Start/End: Complemental strand, 75661 - 75429
Alignment:
| Q |
57 |
acacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctgactgaacgtcgt |
156 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||| || || | |||||||||||| ||||||||||| |||||||||| ||| | ||||||| | |
|
|
| T |
75661 |
acacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacctcttaaggaacgtcat |
75562 |
T |
|
| Q |
157 |
attccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatc |
256 |
Q |
| |
|
|||| | || || | || ||||||||||| ||||| |||||||| | ||||||| | |||||||| || ||||||||||||||||| || ||||| || |
|
|
| T |
75561 |
attcaataggcaatactgataccacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctctttaggatggtc |
75462 |
T |
|
| Q |
257 |
tttcttcaaaattgacaatgggggcgagattct |
289 |
Q |
| |
|
||||||||||||||| || || || |||||||| |
|
|
| T |
75461 |
tttcttcaaaattgataaaggaggggagattct |
75429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 289
Target Start/End: Complemental strand, 84105 - 83858
Alignment:
| Q |
42 |
gcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaattt |
141 |
Q |
| |
|
|||||||| |||| ||||||||||| ||||| ||||||||||||||||| || || | |||||||||||| ||||||||||| |||||||||| | |
|
|
| T |
84105 |
gcatgttgatctttgacacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacct |
84006 |
T |
|
| Q |
142 |
ctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatc |
241 |
Q |
| |
|
|| | ||||||| ||||| | || || | || ||||||||||| ||||| |||||||| ||||||||| | |||||||| || ||||||| |||||| |
|
|
| T |
84005 |
cttaaggaacgtcatattcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatc |
83906 |
T |
|
| Q |
242 |
ctccttgggatgatctttcttcaaaattgacaatgggggcgagattct |
289 |
Q |
| |
|
||| || | ||| ||||||||||||||||| || || || |||||||| |
|
|
| T |
83905 |
ctctttagtatggtctttcttcaaaattgataaaggaggggagattct |
83858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 289
Target Start/End: Complemental strand, 121777 - 121530
Alignment:
| Q |
42 |
gcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaattt |
141 |
Q |
| |
|
|||||||| |||| ||||||||||| ||||| ||||||||||||||||| || || | |||||||||||| ||||||||||| |||||||||| | |
|
|
| T |
121777 |
gcatgttgatctttgacacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacct |
121678 |
T |
|
| Q |
142 |
ctgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatc |
241 |
Q |
| |
|
|| | ||||||| ||||| | || || | || ||||||||||| ||||| |||||||| ||||||||| | |||||||| || ||||||| |||||| |
|
|
| T |
121677 |
cttaaggaacgtcatattcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatc |
121578 |
T |
|
| Q |
242 |
ctccttgggatgatctttcttcaaaattgacaatgggggcgagattct |
289 |
Q |
| |
|
||| || | ||| ||||||||||||||||| || || || |||||||| |
|
|
| T |
121577 |
ctctttagtatggtctttcttcaaaattgataaaggaggggagattct |
121530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 43 - 233
Target Start/End: Complemental strand, 149031 - 148841
Alignment:
| Q |
43 |
catgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttc |
142 |
Q |
| |
|
||||||| |||| ||||||||||| ||||| ||||||||||||| ||| || || | |||||||||||| ||||||||||| |||||||||| || |
|
|
| T |
149031 |
catgttgatctttgacacaaccattgttcataacataatagcataatggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacctc |
148932 |
T |
|
| Q |
143 |
tgactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatt |
233 |
Q |
| |
|
||| |||| || ||||| || | || || || ||||||||||| ||||| |||||||| ||||||||| |||||||| || |||||| |
|
|
| T |
148931 |
tgaaggaacatcatattcaacatgcaatattgataccacattgcatactatatcgagacttgggtcagattttgtgaaatttgacgtcatt |
148841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 42165 - 42379
Alignment:
| Q |
57 |
acacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctgactgaacgtcgt |
156 |
Q |
| |
|
||||| ||||| |||||||| || ||||||| ||| || || || |||||||||||| ||| ||| |||| | |||||||| ||| ||| | || |||| |
|
|
| T |
42165 |
acacagccattgttcatgacgtagtagcataatggcttatgggtagccatttcatcggtgaagtcaatttctatttcgttaacttccgacgggacatcgt |
42264 |
T |
|
| Q |
157 |
attccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatc |
256 |
Q |
| |
|
|||| || || || | | ||||||||||||||||| |||||||| || |||||| | ||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
42265 |
attcaacaggcaaaactaacaccacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctccttaggatgatt |
42364 |
T |
|
| Q |
257 |
tttcttcaaaattga |
271 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
42365 |
tttcttcaaaattga |
42379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 226 - 323
Target Start/End: Complemental strand, 65376 - 65279
Alignment:
| Q |
226 |
aagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||| |
|
|
| T |
65376 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacaca |
65279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 226 - 323
Target Start/End: Complemental strand, 74554 - 74457
Alignment:
| Q |
226 |
aagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgttgatttcttaaccatttcgaacaca |
323 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||||||||||||| |
|
|
| T |
74554 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacaca |
74457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 44 - 266
Target Start/End: Original strand, 48766 - 48988
Alignment:
| Q |
44 |
atgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttct |
143 |
Q |
| |
|
|||||| | ||| ||||||||||| ||||| ||||| || ||||||||||| || | || || || || ||||||||||| ||||||||||| ||| |
|
|
| T |
48766 |
atgttgatattcgacacaaccattgttcataacatagtaacatagtggtttatggatagcaatctcgacggtaaaatcactttccacttcgttaatgtct |
48865 |
T |
|
| Q |
144 |
gactgaacgtcgtattccaccggtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcct |
243 |
Q |
| |
|
|| ||||||| ||||| || || || | || || ||||| || | |||||||||||| ||||||||| | | ||| ||||| |||||||||||||||| |
|
|
| T |
48866 |
gaaggaacgtcatattcaacaggcaacactgacactacattacatagtatgtcgagacttgggtcagattcagagaagttcgacgtcatttcttcatcct |
48965 |
T |
|
| Q |
244 |
ccttgggatgatctttcttcaaa |
266 |
Q |
| |
|
|||| |||||||||||||||||| |
|
|
| T |
48966 |
cctttggatgatctttcttcaaa |
48988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 127000 - 127104
Alignment:
| Q |
23 |
gtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatcgacgaaatca |
122 |
Q |
| |
|
||||||| |||| || || || ||||| ||||| |||| |||||||||||| ||||||||||||| ||| || ||| | ||||||||||| ||||||| |
|
|
| T |
127000 |
gtctggtctttcgaatacggcgtgttgatcttcaacaccaccattattcataacataatagcataatggcttatgaatcgccatttcatcagtgaaatca |
127099 |
T |
|
| Q |
123 |
ctttc |
127 |
Q |
| |
|
||||| |
|
|
| T |
127100 |
ctttc |
127104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0183 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0183
Description:
Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 98
Target Start/End: Original strand, 12886 - 12927
Alignment:
| Q |
57 |
acacaaccattattcatgacataatagcatagtggtttgtga |
98 |
Q |
| |
|
|||||||| |||| ||| |||||||||||||||||||||||| |
|
|
| T |
12886 |
acacaaccgttatccataacataatagcatagtggtttgtga |
12927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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