View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18786_high_27 (Length: 281)
Name: NF18786_high_27
Description: NF18786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18786_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 27122423 - 27122676
Alignment:
| Q |
21 |
acaatacctatatatataattttctcattatgaaggtattgttcatttcttttctcctaattagtatggttatgttaaaccagaacaatctggtcgaggg |
120 |
Q |
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| T |
27122423 |
acaatacctatatatataattttctcatcatgaaggtattgttcatttcttttctcctaattagtatggttatgttaaaccagaacaatctggtcgaggg |
27122522 |
T |
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| Q |
121 |
agaaatttcatataaagatatagagaagagatcaagaaaaaatcatcatcattataatgatacagaaggaaattacactcgaggttgctcccctataaat |
220 |
Q |
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| T |
27122523 |
agaaatttcatttaaagatatagagaagagatcaagaaaaaatcatcatcattataatgatacagaaggaaattacactcgaggttgctcccctataaat |
27122622 |
T |
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| Q |
221 |
aggtgtcgtggacgtgatgatcatcagaatcataatgaatgattagtacctatg |
274 |
Q |
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| T |
27122623 |
aggtgtcgtggacgtgatgatcatcagaatcataatgaatgattagtacctatg |
27122676 |
T |
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