View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF18786_high_47 (Length: 214)
Name: NF18786_high_47
Description: NF18786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18786_high_47 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 23)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 10430908 - 10431078
Alignment:
| Q |
26 |
aaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttata |
125 |
Q |
| |
|
|||||||||||||||||||| || || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
10430908 |
aaaactggaacacaacttgt-ct-atcatattgtgacttcatcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttata |
10431005 |
T |
|
| Q |
126 |
cctttcttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10431006 |
cctttcttctaacaatggacattccctaattctcagttgcttaagagagtcagggaggctgtcttctggtaat |
10431078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 10666712 - 10666567
Alignment:
| Q |
53 |
atattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattccct |
152 |
Q |
| |
|
|||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
10666712 |
atattgtgactttgtaatttattgatatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattcctc |
10666613 |
T |
|
| Q |
153 |
aattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10666612 |
aatgtgcagttccttaagagagtcagggaggctgtcttctggtaat |
10666567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 11772429 - 11772266
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
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|
| T |
11772429 |
ggaacacagcttgttctcat---attgtgactttttcatttatatctatgacagggatgtgagcgattttggaccaatgttctttccttttatacctttc |
11772333 |
T |
|
| Q |
132 |
ttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||| ||| ||| ||| |||||| |||||||||||| |||||||||||||| |||||| |
|
|
| T |
11772332 |
ttctaacaatgggcatccccaaatggtcagttgcttaagagagtcggggaggctgtcttccggtaat |
11772266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 10035199 - 10035035
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||||||||| || || ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
10035199 |
ggaacacaacttgt-ct-atcatattgtgacttcatgatttatatctatgaaagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
10035102 |
T |
|
| Q |
132 |
ttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||| || | || ||| | |||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
10035101 |
ttctaacaatgggcaattccaaatgcagagttccctaagagagtcagtgaggctgtcttctggtaat |
10035035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 11778856 - 11779019
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
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|
| T |
11778856 |
ggaacacagcttgttctcat---attgtgactttttcatttatttctatgacagggatgtgagcgattttggaccaatgttctttccttttatacctttc |
11778952 |
T |
|
| Q |
132 |
ttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||| ||| ||| ||| |||||| |||||||||||| |||||||||||||| |||||| |
|
|
| T |
11778953 |
ttctaacaatgggcatccccaaatggtcagttgcttaagagagtcggggaggctgtcttccggtaat |
11779019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 10520681 - 10520517
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||||||||| || || |||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10520681 |
ggaacacaacttgt-ct-atcatattgtgacttggtaatttattgatatgactgggatgtgagcaattttggaccaatgttccttccttttatacctttc |
10520584 |
T |
|
| Q |
132 |
ttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
10520583 |
ttctaacaatggacattcccaaatgagcagtctcttcagagagtcagggaggctgtcttctggtaat |
10520517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 10360668 - 10360838
Alignment:
| Q |
26 |
aaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttata |
125 |
Q |
| |
|
||||| |||||||||||||| || || |||||||||||| ||| ||||| | |||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
10360668 |
aaaacgggaacacaacttgt-ct-atcatattgtgacttggtcgtttatttttatgacggggatgtgagcaattttggagcaatgttccttccttttata |
10360765 |
T |
|
| Q |
126 |
cctttcttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10360766 |
cctttcttctaacaatgggcaatcatagatgtccagttccttaagagagtcagggaggctgtcttctggtaat |
10360838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 9853073 - 9852909
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||||||||| || || ||||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9853073 |
ggaacacaacttgt-ct-atcatattgtaacctggtcatttatttctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
9852976 |
T |
|
| Q |
132 |
ttctaacaatggacattccctaattct-cagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
||||||||||||||| ||| ||| | | |||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
9852975 |
ttctaacaatggaca-tccataaatgtccagtctcttcagtgagtcagggaggctgtcttctggtaat |
9852909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 198
Target Start/End: Complemental strand, 9842010 - 9841890
Alignment:
| Q |
78 |
tatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattccctaattctcagttccttaagagagtca |
177 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| || |||||||||| |
|
|
| T |
9842010 |
tatgacagggatgtgagcaattttggagcaatgttccttccttttatacctttcttctaacaatggacatccccaaatgttcagacgctcaagagagtca |
9841911 |
T |
|
| Q |
178 |
gggaggctgtcttctggtaat |
198 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
9841910 |
gggaggctgtcttctggtaat |
9841890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 9980662 - 9980498
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||||||||| || || |||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9980662 |
ggaacacaacttgt-ct-atcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
9980565 |
T |
|
| Q |
132 |
ttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||| || | || ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9980564 |
ttctaacaatgggcaaccatcgatgtacagttccttaagagattcagggaggctgtcttctggtaat |
9980498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 10372778 - 10372948
Alignment:
| Q |
26 |
aaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttata |
125 |
Q |
| |
|
||||| |||||||||||||| || || ||||||||| || ||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10372778 |
aaaacgggaacacaacttgt-ct-atcatattgtgatttggtcgtttatttttatgacggggatgtgagcaattttggaccaatgttccttccttttata |
10372875 |
T |
|
| Q |
126 |
cctttcttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||||||||| ||| || |||| |||| ||| |||||| |||||||||||||||||||||| |
|
|
| T |
10372876 |
cctttcttctaacaatgggcatcccataatgaccagtctcttcagagaggaagggaggctgtcttctggtaat |
10372948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 10130068 - 10129954
Alignment:
| Q |
84 |
agggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattccctaattctcagttccttaagagagtcagggagg |
183 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| | ||||| | ||||||| ||||||||| |
|
|
| T |
10130068 |
agggatgtgagcaattttggagcaatgttccttccttttatacctttcttctaacaatggacatccttgaatgcacagttgcataagagaatcagggagg |
10129969 |
T |
|
| Q |
184 |
ctgtcttctggtaat |
198 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
10129968 |
ctgtcttctggtaat |
10129954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 10583784 - 10583614
Alignment:
| Q |
26 |
aaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttata |
125 |
Q |
| |
|
||||| |||||||||||||| || || |||||||||||| || |||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
10583784 |
aaaacgggaacacaacttgt-ct-atcatattgtgactttgtgatttatttgtatgacagggatgtgagcaattttggaccaatattcattccttttata |
10583687 |
T |
|
| Q |
126 |
cctttcttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
10583686 |
cctttcttctaacaatgggcaaaattggatggtcagtcgctcaagagagtcagggaggctgtcttctggtaat |
10583614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 143
Target Start/End: Complemental strand, 10263897 - 10263788
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||||||||| || || ||||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10263897 |
ggaacacaacttgt-ct-atcatattgtgacttcatcatttattcttatgaaagggatgtgagcaattttggactaatgttccttccttttatacctttc |
10263800 |
T |
|
| Q |
132 |
ttctaacaatgg |
143 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10263799 |
ttctaacaatgg |
10263788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 53 - 198
Target Start/End: Complemental strand, 10503828 - 10503683
Alignment:
| Q |
53 |
atattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattccct |
152 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
10503828 |
atattgtgacttgtccatctatttctatgacagggatgtgagaaattttggaccaatgttccttccttttatacctttcttctaatgttgggcatctttg |
10503729 |
T |
|
| Q |
153 |
aattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
||| ||||| ||||||||| ||||| |||||||||||||||||| |
|
|
| T |
10503728 |
aatgatcagtagcttaagagaatcaggaaggctgtcttctggtaat |
10503683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 10092146 - 10092082
Alignment:
| Q |
79 |
atgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatgg |
143 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10092146 |
atgacagggatgtgagaaattttggaccaatgttccttccttttatacctttcttctaacaatgg |
10092082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 10199028 - 10198964
Alignment:
| Q |
79 |
atgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatgg |
143 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10199028 |
atgacagggatgtgagaaattttggaccaatgttccttccttttatacctttcttctaacaatgg |
10198964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 10531933 - 10531868
Alignment:
| Q |
78 |
tatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatgg |
143 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10531933 |
tatgacagggatgtgagaaattttggaccaattttccttccttttatacctttcttctaacaatgg |
10531868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 10086352 - 10086265
Alignment:
| Q |
53 |
atattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaa |
140 |
Q |
| |
|
||||||||| |||| ||||||| | ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10086352 |
atattgtgatttcgccatttatttttatgacaggaatgagagaaattttggaccaatgttccttccttttatacctttcttttaacaa |
10086265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 10193272 - 10193185
Alignment:
| Q |
53 |
atattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaa |
140 |
Q |
| |
|
||||||||| |||| ||||||| | ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10193272 |
atattgtgatttcgccatttatttttatgacaggaatgagagaaattttggaccaatgttccttccttttatacctttcttttaacaa |
10193185 |
T |
|
Back To:
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Target: chr3; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 10680731 - 10680666
Alignment:
| Q |
78 |
tatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatgg |
143 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10680731 |
tatgacagggatgtgagaaattttggaccgatgttcattccttttatacctttcttctaacaatgg |
10680666 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 11242500 - 11242586
Alignment:
| Q |
88 |
atgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattccctaattctcagttccttaagagag |
174 |
Q |
| |
|
|||||||| ||||||||||||||||||| | ||| ||||||||||||||||| || |||||| |||| |||||| ||||||||||| |
|
|
| T |
11242500 |
atgtgagctattttggaccaatgttcctgcttttgatacctttcttctaacacagggcattccttaatgctcagtaccttaagagag |
11242586 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 8585531 - 8585578
Alignment:
| Q |
68 |
catttatatctatgacagggatgtgagcaattttggaccaatgttcct |
115 |
Q |
| |
|
||||||||| ||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
8585531 |
catttatatttatgacaggtatgtgagcaatgttggaccaatgttcct |
8585578 |
T |
|
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Target: scaffold0083 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 198
Target Start/End: Original strand, 54475 - 54639
Alignment:
| Q |
32 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
131 |
Q |
| |
|
|||||||||||||| || || |||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54475 |
ggaacacaacttgt-ct-atcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttc |
54572 |
T |
|
| Q |
132 |
ttctaacaatggacattccctaattctcagttccttaagagagtcagggaggctgtcttctggtaat |
198 |
Q |
| |
|
|||||||||||| || | || ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
54573 |
ttctaacaatgggcaaccatcgatgtacagttccttaagagattcagggaggctgtcttctggtaat |
54639 |
T |
|
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Target: chr4 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 53 - 197
Target Start/End: Original strand, 17849815 - 17849959
Alignment:
| Q |
53 |
atattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattccct |
152 |
Q |
| |
|
|||||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || ||| || |
|
|
| T |
17849815 |
atattgtgacttggtcctcaatttctatgacagggatgtgagcaattttggaccaatgttcctgccttttatacctttcttctaatatagggcatcgcca |
17849914 |
T |
|
| Q |
153 |
aattctcagttccttaagagagtcagggaggctgtcttctggtaa |
197 |
Q |
| |
|
||| |||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
17849915 |
aatgaccagtcgcttaagagaggaagggaggctgtcttctggtaa |
17849959 |
T |
|
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Target: chr2 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 26910049 - 26909975
Alignment:
| Q |
69 |
atttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatgg |
143 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
26910049 |
atttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttgtacctttcttctaacaatgg |
26909975 |
T |
|
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Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 44954552 - 44954634
Alignment:
| Q |
53 |
atattgtgacttcgtcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttct |
135 |
Q |
| |
|
|||||||||||| | ||| ||| ||||||||| | || | |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
44954552 |
atattgtgacttggccatctatttctatgacatgaattttagcaattttggaccaatgttccttccttctatacctttcttct |
44954634 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 11488255 - 11488217
Alignment:
| Q |
68 |
catttatatctatgacagggatgtgagcaattttggacc |
106 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
11488255 |
catttatttctttgacagggatgtgagcaattttggacc |
11488217 |
T |
|
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