View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18786_high_48 (Length: 206)

Name: NF18786_high_48
Description: NF18786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18786_high_48
NF18786_high_48
[»] chr2 (34 HSPs)
chr2 (15-192)||(20347330-20347508)
chr2 (15-192)||(30190933-30191111)
chr2 (15-192)||(6171323-6171500)
chr2 (27-192)||(11883633-11883799)
chr2 (27-192)||(40469607-40469773)
chr2 (15-183)||(32673009-32673178)
chr2 (24-192)||(26737655-26737825)
chr2 (25-120)||(15920911-15921006)
chr2 (26-183)||(17345750-17345908)
chr2 (26-100)||(40221489-40221563)
chr2 (145-192)||(11883923-11883970)
chr2 (148-192)||(24832341-24832385)
chr2 (145-193)||(15920787-15920835)
chr2 (145-189)||(40469440-40469484)
chr2 (145-192)||(30191222-30191269)
chr2 (148-192)||(2639482-2639526)
chr2 (148-192)||(18296693-18296737)
chr2 (148-192)||(20347173-20347217)
chr2 (145-181)||(26737501-26737537)
chr2 (148-192)||(26841597-26841641)
chr2 (148-192)||(26842238-26842282)
chr2 (148-191)||(7591212-7591255)
chr2 (148-191)||(18296087-18296130)
chr2 (24-75)||(32672847-32672897)
chr2 (145-192)||(43495319-43495366)
chr2 (33-83)||(6495541-6495591)
chr2 (148-189)||(2638833-2638874)
chr2 (155-192)||(41790919-41790956)
chr2 (148-192)||(5378671-5378715)
chr2 (148-192)||(8851158-8851202)
chr2 (24-80)||(15321512-15321567)
chr2 (149-192)||(15920912-15920956)
chr2 (148-192)||(17850988-17851032)
chr2 (148-192)||(37720214-37720258)
[»] chr7 (35 HSPs)
chr7 (15-192)||(3687523-3687700)
chr7 (15-192)||(9412191-9412369)
chr7 (26-134)||(6908391-6908498)
chr7 (28-134)||(5349641-5349747)
chr7 (27-108)||(13772793-13772874)
chr7 (26-189)||(34235856-34236019)
chr7 (29-134)||(35080132-35080237)
chr7 (24-108)||(15567164-15567248)
chr7 (27-108)||(33628473-33628554)
chr7 (145-192)||(13772898-13772945)
chr7 (145-192)||(9412033-9412080)
chr7 (155-192)||(23686724-23686761)
chr7 (145-185)||(3687371-3687411)
chr7 (148-192)||(13772651-13772695)
chr7 (148-192)||(44599499-44599543)
chr7 (148-192)||(44600135-44600179)
chr7 (149-188)||(6908485-6908524)
chr7 (26-84)||(8953717-8953775)
chr7 (155-193)||(42418600-42418638)
chr7 (155-192)||(5735262-5735299)
chr7 (148-189)||(13863326-13863367)
chr7 (26-75)||(18925230-18925279)
chr7 (155-188)||(27096060-27096093)
chr7 (155-188)||(27182210-27182243)
chr7 (25-57)||(5735398-5735430)
chr7 (148-192)||(9035293-9035337)
chr7 (148-192)||(10533044-10533088)
chr7 (156-192)||(13863964-13864000)
chr7 (26-54)||(15567017-15567045)
chr7 (148-192)||(20418898-20418942)
chr7 (148-192)||(33628660-33628704)
chr7 (148-192)||(37888843-37888887)
chr7 (148-192)||(37889259-37889303)
chr7 (148-192)||(37972396-37972440)
chr7 (27-75)||(38191388-38191435)
[»] scaffold0802 (2 HSPs)
scaffold0802 (15-192)||(1286-1464)
scaffold0802 (145-192)||(1128-1175)
[»] chr1 (22 HSPs)
chr1 (15-192)||(47955316-47955494)
chr1 (15-184)||(17518470-17518638)
chr1 (15-191)||(41082920-41083096)
chr1 (27-192)||(22149580-22149743)
chr1 (15-134)||(8108888-8109007)
chr1 (148-192)||(8108993-8109037)
chr1 (145-184)||(13589656-13589695)
chr1 (145-192)||(47955605-47955652)
chr1 (146-192)||(8108731-8108777)
chr1 (29-192)||(31847905-31848067)
chr1 (148-192)||(48190781-48190825)
chr1 (148-192)||(49284419-49284463)
chr1 (145-192)||(31848189-31848236)
chr1 (146-192)||(1177016-1177062)
chr1 (155-188)||(1176730-1176763)
chr1 (149-192)||(8108899-8108943)
chr1 (148-192)||(9347136-9347180)
chr1 (148-192)||(32163043-32163087)
chr1 (148-192)||(39692000-39692044)
chr1 (148-192)||(44911035-44911079)
chr1 (148-192)||(48191355-48191399)
chr1 (148-192)||(50430081-50430125)
[»] chr3 (25 HSPs)
chr3 (15-192)||(20968886-20969063)
chr3 (15-183)||(10293627-10293795)
chr3 (27-135)||(18874957-18875065)
chr3 (28-136)||(9026800-9026907)
chr3 (26-100)||(3644721-3644795)
chr3 (26-83)||(13657622-13657679)
chr3 (145-192)||(10293906-10293953)
chr3 (149-192)||(45060872-45060915)
chr3 (149-192)||(18874892-18874935)
chr3 (145-192)||(18875188-18875235)
chr3 (145-188)||(20968732-20968775)
chr3 (148-193)||(9027033-9027077)
chr3 (151-184)||(26540872-26540905)
chr3 (27-84)||(45060774-45060830)
chr3 (147-184)||(47871121-47871158)
chr3 (28-84)||(4947377-4947433)
chr3 (26-84)||(1101091-1101148)
chr3 (146-184)||(17372316-17372354)
chr3 (148-189)||(1928434-1928475)
chr3 (148-181)||(14015964-14015997)
chr3 (26-83)||(17372474-17372531)
chr3 (155-192)||(45060606-45060643)
chr3 (25-77)||(18874885-18874936)
chr3 (20-52)||(47871117-47871149)
chr3 (148-192)||(48159907-48159951)
[»] chr8 (45 HSPs)
chr8 (15-192)||(15156051-15156229)
chr8 (15-192)||(765744-765922)
chr8 (15-192)||(12281134-12281312)
chr8 (15-192)||(41662269-41662447)
chr8 (27-192)||(43245881-43246047)
chr8 (15-120)||(43162403-43162508)
chr8 (27-192)||(16928952-16929115)
chr8 (15-132)||(34313930-34314047)
chr8 (27-136)||(37752181-37752290)
chr8 (28-180)||(74864-75016)
chr8 (26-118)||(18019872-18019964)
chr8 (20-100)||(9465675-9465755)
chr8 (26-116)||(37670132-37670222)
chr8 (26-134)||(7127828-7127936)
chr8 (26-99)||(33748161-33748236)
chr8 (145-192)||(15155893-15155940)
chr8 (145-192)||(16929239-16929286)
chr8 (145-192)||(37752413-37752460)
chr8 (145-192)||(43246173-43246220)
chr8 (148-192)||(37752094-37752138)
chr8 (145-192)||(12281423-12281470)
chr8 (36-101)||(43597892-43597957)
chr8 (148-192)||(9823361-9823405)
chr8 (148-192)||(13027281-13027325)
chr8 (148-192)||(23123348-23123392)
chr8 (148-192)||(39724048-39724092)
chr8 (149-192)||(3463946-3463989)
chr8 (24-83)||(22786930-22786989)
chr8 (145-184)||(23123514-23123553)
chr8 (146-184)||(7127670-7127708)
chr8 (150-192)||(13026645-13026687)
chr8 (26-75)||(23123518-23123564)
chr8 (145-183)||(34313782-34313820)
chr8 (149-183)||(43598756-43598790)
chr8 (145-182)||(9465871-9465908)
chr8 (26-75)||(16928947-16928995)
chr8 (26-75)||(16929243-16929291)
chr8 (145-182)||(18020085-18020122)
chr8 (148-192)||(74696-74739)
chr8 (27-83)||(11007651-11007707)
chr8 (145-192)||(18019920-18019968)
chr8 (148-192)||(22851400-22851444)
chr8 (148-192)||(25438802-25438846)
chr8 (148-192)||(34498555-34498599)
chr8 (24-52)||(43598754-43598782)
[»] chr6 (23 HSPs)
chr6 (27-192)||(3403867-3404033)
chr6 (15-182)||(18242022-18242190)
chr6 (27-191)||(30388242-30388405)
chr6 (26-185)||(2762500-2762660)
chr6 (26-182)||(13579529-13579685)
chr6 (26-100)||(10039844-10039918)
chr6 (26-100)||(11656583-11656657)
chr6 (24-85)||(33972188-33972249)
chr6 (148-192)||(3403727-3403771)
chr6 (145-192)||(18241864-18241911)
chr6 (145-192)||(11656779-11656826)
chr6 (25-83)||(33658560-33658618)
chr6 (100-184)||(21031996-21032081)
chr6 (155-192)||(21032287-21032324)
chr6 (155-188)||(30388075-30388108)
chr6 (145-192)||(2762616-2762664)
chr6 (148-184)||(10039693-10039729)
chr6 (145-192)||(10039840-10039888)
chr6 (148-192)||(33829000-33829044)
chr6 (148-192)||(33829636-33829680)
chr6 (145-184)||(3825544-3825583)
chr6 (145-192)||(12714441-12714488)
chr6 (149-189)||(31598274-31598314)
[»] chr4 (37 HSPs)
chr4 (15-184)||(3930346-3930516)
chr4 (15-192)||(13198613-13198792)
chr4 (27-192)||(16555695-16555861)
chr4 (17-132)||(11241558-11241673)
chr4 (15-132)||(22681651-22681767)
chr4 (28-134)||(5206138-5206244)
chr4 (24-133)||(8488255-8488363)
chr4 (28-131)||(35393548-35393651)
chr4 (26-116)||(27304894-27304984)
chr4 (26-83)||(49178636-49178693)
chr4 (145-192)||(13198903-13198950)
chr4 (148-192)||(56505703-56505747)
chr4 (145-192)||(16555525-16555572)
chr4 (145-192)||(18077199-18077246)
chr4 (145-192)||(49178813-49178860)
chr4 (145-192)||(27304890-27304938)
chr4 (148-192)||(36096475-36096519)
chr4 (148-192)||(45830196-45830240)
chr4 (148-192)||(50678789-50678833)
chr4 (145-188)||(22681588-22681631)
chr4 (145-183)||(27304735-27304773)
chr4 (26-75)||(8181996-8182045)
chr4 (26-75)||(8182173-8182222)
chr4 (26-75)||(16555818-16555866)
chr4 (145-182)||(35393773-35393810)
chr4 (148-189)||(36095830-36095871)
chr4 (149-182)||(39415244-39415277)
chr4 (24-53)||(54509114-54509143)
chr4 (145-192)||(8182001-8182049)
chr4 (148-192)||(24775783-24775827)
chr4 (148-192)||(25161888-25161932)
chr4 (148-192)||(28196356-28196400)
chr4 (148-192)||(28196773-28196817)
chr4 (148-192)||(32703650-32703694)
chr4 (24-52)||(39415251-39415279)
chr4 (148-192)||(50679424-50679468)
chr4 (149-189)||(54509116-54509156)
[»] scaffold0192 (1 HSPs)
scaffold0192 (27-192)||(25247-25413)
[»] chr5 (29 HSPs)
chr5 (27-192)||(18433025-18433191)
chr5 (15-192)||(25115767-25115945)
chr5 (15-192)||(25174859-25175037)
chr5 (28-188)||(34576880-34577040)
chr5 (28-192)||(26020460-26020625)
chr5 (26-134)||(5187591-5187699)
chr5 (29-121)||(5779742-5779834)
chr5 (65-134)||(22429141-22429210)
chr5 (29-131)||(9665598-9665700)
chr5 (145-192)||(18433313-18433360)
chr5 (145-192)||(25175148-25175195)
chr5 (147-192)||(25116060-25116105)
chr5 (148-188)||(22428947-22428987)
chr5 (155-192)||(16466749-16466786)
chr5 (148-189)||(22429196-22429237)
chr5 (148-192)||(18817611-18817655)
chr5 (149-189)||(41382905-41382945)
chr5 (145-192)||(16726088-16726135)
chr5 (31-84)||(12441196-12441249)
chr5 (148-189)||(18816965-18817006)
chr5 (150-191)||(37780744-37780785)
chr5 (25-184)||(41383047-41383203)
chr5 (26-82)||(9869739-9869795)
chr5 (148-192)||(11351427-11351471)
chr5 (148-192)||(12498577-12498621)
chr5 (148-192)||(12498928-12498972)
chr5 (148-192)||(21207236-21207280)
chr5 (149-189)||(23011091-23011131)
chr5 (148-192)||(26571164-26571208)
[»] scaffold0319 (2 HSPs)
scaffold0319 (27-184)||(6575-6733)
scaffold0319 (145-192)||(6404-6451)
[»] scaffold0110 (1 HSPs)
scaffold0110 (25-184)||(45683-45843)
[»] scaffold1221 (1 HSPs)
scaffold1221 (15-132)||(1552-1669)
[»] scaffold0002 (1 HSPs)
scaffold0002 (34-184)||(411940-412090)
[»] scaffold0598 (1 HSPs)
scaffold0598 (26-122)||(6752-6848)
[»] scaffold0015 (1 HSPs)
scaffold0015 (24-183)||(16870-17032)
[»] scaffold0001 (5 HSPs)
scaffold0001 (29-100)||(439001-439072)
scaffold0001 (145-192)||(438940-438987)
scaffold0001 (156-192)||(183670-183706)
scaffold0001 (145-192)||(439196-439243)
scaffold0001 (29-83)||(183544-183598)
[»] scaffold0328 (2 HSPs)
scaffold0328 (148-192)||(6162-6206)
scaffold0328 (148-189)||(6795-6836)
[»] scaffold0009 (1 HSPs)
scaffold0009 (145-182)||(205706-205743)
[»] scaffold0376 (1 HSPs)
scaffold0376 (145-183)||(7597-7635)
[»] scaffold0035 (1 HSPs)
scaffold0035 (26-80)||(73086-73140)


Alignment Details
Target: chr2 (Bit Score: 123; Significance: 2e-63; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 20347330 - 20347508
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20347330 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 20347429  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  |||||||| |||         ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  20347430 aagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 20347508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 30191111 - 30190933
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  30191111 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaa 30191012  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  30191011 aagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 30190933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 6171323 - 6171500
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6171323 aatataagtgagggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 6171422  T
Q  115 aagatgggtagcaaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||| ||||           |||||| |||||| ||||||| |||||||||||||||||||||||    
T  6171423 aagatggggtgcaaaattgctcaaaaaaaaagaggggtgcaaaatcccacaattggcaaaagataggggggaaaagtg 6171500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 11883799 - 11883633
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |  ||    
T  11883799 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcataaagggggcaaaaagatgaggtgc 11883700  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||| ||||         ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11883699 aaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 11883633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 40469607 - 40469773
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    |||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 40469706  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||         ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  40469707 aaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtg 40469773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 32673009 - 32673178
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| || | ||    
T  32673009 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagagggcgaa 32673108  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
    ||||||||  ||||||||||||          |||||||| |||||||||||||| ||||||||||||||    
T  32673109 aagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggcaaaagatagggg 32673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 26737655 - 26737825
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt-gaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatggg 122  Q
    |||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  26737655 gagggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatttgaacacaaagatggggtgcaaaatcagaaagggggcaaaaggatggg 26737754  T
Q  123 tagcaaaatcgctcnnnnnnnngag-ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
      | |||||| |||         || |||||| ||||||||||| ||||||||||||||||| ||||||||    
T  26737755 gtgtaaaatctctcaaaaaaaaaagaggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtg 26737825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 120
Target Start/End: Original strand, 15920911 - 15921006
Alignment:
Q  25 agggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatg 120  Q
    |||||| ||||||||||||||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  15920911 agggtgtaaaatcgcacaattagcaaaaagttagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaatgaacaaaaagatg 15921006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 17345908 - 17345750
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtag 125  Q
    ||||| ||||||||||||||| |||||| ||| ||| | ||||||||||||||||||||||||| ||||||||||| || |||| ||||||||| ||  |    
T  17345908 gggtgaaaaatcgcacaattaacaaaaatatagggggcaaaagtgcaattgaacacaaagatggagtgcaaaatcaaaagggggccaaaaagatagggtg 17345809  T
Q  126 caaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
    ||||||| |||         ||||||||| ||||| ||| |||||||||||||||||||    
T  17345808 caaaatcactcaaaataaaagagggggtgcaaaattgcataattagcaaaagatagggg 17345750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 40221489 - 40221563
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatc 100  Q
    |||||||||||||||||||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||    
T  40221489 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagcgcaattgaacacaaagatggggtgcaaaatc 40221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 11883923 - 11883970
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11883923 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 11883970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 24832385 - 24832341
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  24832385 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 24832341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 15920835 - 15920787
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtga 193  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  15920835 gagggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtga 15920787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 40469484 - 40469440
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||    
T  40469484 gagggggtgcaaaatcgcacaattagcaaaagataggagggaaaa 40469440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 30191222 - 30191269
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||    
T  30191222 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtg 30191269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 2639482 - 2639526
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  2639482 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 2639526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 18296693 - 18296737
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 18296737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 20347217 - 20347173
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||||||||||| |||||||||| |||||||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtg 20347173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 26737537 - 26737501
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagatagg 181  Q
    ||||||||| |||||||||||||||||||||||||||    
T  26737537 gagggggtgcaaaatcgcacaattagcaaaagatagg 26737501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 26841641 - 26841597
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  26841641 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 26841597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 26842238 - 26842282
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  26842238 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 26842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 7591255 - 7591212
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagt 191  Q
    |||||| |||||||||||||| |||||||||||||| |||||||    
T  7591255 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagt 7591212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 191
Target Start/End: Complemental strand, 18296130 - 18296087
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagt 191  Q
    |||||| |||||||||||||| |||||||||||||| |||||||    
T  18296130 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagt 18296087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 32672897 - 32672847
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    ||||||||||||||||||||||| | ||||||||||| || |||||||||||    
T  32672897 gagggtgcaaaatcgcacaattaac-aaaagataaggaacaaaagtgcaatt 32672847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 43495366 - 43495319
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| || ||||||||||||||||||||| ||||| ||||||||||    
T  43495366 gaggggatgaaaaatcgcacaattagcaaaatataggtgggaaaagtg 43495319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 6495591 - 6495541
Alignment:
Q  33 aaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    |||| |||||||| ||||||||||| ||||| ||||||||||| |||||||    
T  6495591 aaatagcacaattggcaaaaagataggggacaaaagtgcaattaaacacaa 6495541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 2638874 - 2638833
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  2638874 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaa 2638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 41790919 - 41790956
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  41790919 aaaatcgcacaattggcaaaatataggggggaaaagtg 41790956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 5378715 - 5378671
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 5378671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 8851202 - 8851158
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  8851202 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 8851158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 15321567 - 15321512
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaaca 80  Q
    ||||||||||||||||||| || | ||||||||| ||||| ||||||||||| ||||    
T  15321567 gagggtgcaaaatcgcacagttgg-aaaaagataggggacaaaagtgcaattaaaca 15321512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 15920912 - 15920956
Alignment:
Q  149 gggtgtaaaatcgcacaattagc-aaaagataggggggaaaagtg 192  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||    
T  15920912 gggtgtaaaatcgcacaattagcaaaaagttagggggcaaaagtg 15920956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 17851032 - 17850988
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  17851032 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 17850988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 37720258 - 37720214
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  37720258 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 37720214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 9e-63; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 3687523 - 3687700
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3687523 aatataagtgagggtgtaaaatcgcacaattagcaaaaaaataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 3687622  T
Q  115 aagatgggtagcaaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||        ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  3687623 aagatggggtgcaaaatcgctcaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 3687700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 9412191 - 9412369
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  9412191 aatataagtgagggtgcaaaatcgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaa 9412290  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  9412291 aagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 9412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 6908391 - 6908498
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtag 125  Q
    |||||||||||||||||||||||||||||||| |||   |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||| |    
T  6908391 gggtgcaaaatcgcacaattagcaaaaagatagggggtaaaagcgcaattgaacacaaagatggggtgcaaaatcagaaaggaggcaaaaagatgggt-g 6908489  T
Q  126 caaaatcgc 134  Q
    |||||||||    
T  6908490 caaaatcgc 6908498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 5349641 - 5349747
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagca 127  Q
    ||||||||| |||||||  ||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||  |||    
T  5349641 gtgcaaaattgcacaatatgcaaaaagatagggggcaaaagtgcaattgaatacaaagatggggtgcaaaatcagaaagggggtaaaaagatggggtgca 5349740  T
Q  128 aaatcgc 134  Q
    |||||||    
T  5349741 aaatcgc 5349747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 13772793 - 13772874
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggg 108  Q
    ||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||| ||||| ||||||||    
T  13772793 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgaaaaattagaaaggg 13772874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 26 - 189
Target Start/End: Original strand, 34235856 - 34236019
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtag 125  Q
    |||||| |||||| |||||| | ||||||||| ||| | ||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||| ||   |    
T  34235856 gggtgcgaaatcgaacaatttgaaaaaagatagggggcaaaagtgcaattaaacacaaagatggggtgcagaatcagaaatggggcaaaaagacggcgtg 34235955  T
Q  126 caaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||||||||          ||||||| ||||||||||||||||||||||||||  |||||||    
T  34235956 caaaatcgctcaaaaaaagaggggggtgcaaaatcgcacaattagcaaaagatagaagggaaaa 34236019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 35080132 - 35080237
Alignment:
Q  29 tgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagcaa 128  Q
    ||||||||||||||||||||  ||||||| ||| | ||||  |||||||||||||||||| |||||||||||||||||| | ||||||||||||  ||||    
T  35080132 tgcaaaatcgcacaattagcttaaagatagggggcaaaagcacaattgaacacaaagatgaggtgcaaaatcagaaaggaggcaaaaagatggggtgcaa 35080231  T
Q  129 aatcgc 134  Q
    ||||||    
T  35080232 aatcgc 35080237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 15567164 - 15567248
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggg 108  Q
    |||| ||||||||| ||||||||||||||||| | ||| | || |||||||||||||||||||||||||||||||||||||||||    
T  15567164 gaggatgcaaaatcacacaattagcaaaaagagagggggcaaacgtgcaattgaacacaaagatggggtgcaaaatcagaaaggg 15567248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 33628554 - 33628473
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggg 108  Q
    |||||||||| |||||||||||||||||||| ||  | || |||||||||||||||| ||||||||||||||||||||||||    
T  33628554 ggtgcaaaattgcacaattagcaaaaagatagggtgcaaatgtgcaattgaacacaaggatggggtgcaaaatcagaaaggg 33628473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 13772898 - 13772945
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  13772898 gagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtg 13772945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 9412080 - 9412033
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  9412080 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtg 9412033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 23686724 - 23686761
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||||||||||||||||||||||||| |||||||    
T  23686724 aaaatcgcacaattagcaaaagatagggggaaaaagtg 23686761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 3687411 - 3687371
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagatagggggg 185  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  3687411 gagggggtgcaaaatcgcacaattaacaaaagatagggggg 3687371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 13772695 - 13772651
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||| ||||||||||||||||||||| |||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtg 13772651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 44599543 - 44599499
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  44599543 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 44599499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 44600135 - 44600179
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  44600135 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 44600179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Original strand, 6908485 - 6908524
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaa 188  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaa 6908524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 8953775 - 8953717
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaa 84  Q
    ||||||||||||||||| ||   ||||||||| ||||| ||||||||||| ||||||||    
T  8953775 gggtgcaaaatcgcacatttgctaaaaagataggggacaaaagtgcaattaaacacaaa 8953717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 42418638 - 42418600
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaaagtga 193  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  42418638 aaaatcgcacaattagcaaactataggggggaaaagtga 42418600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 5735299 - 5735262
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  5735299 aaaatcgcacaattagccaaagataggggagaaaagtg 5735262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 13863367 - 13863326
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  13863367 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaa 13863326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 18925230 - 18925279
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    |||||||||||||||||||| ||||||||||| ||| | ||||| |||||    
T  18925230 gggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagttcaatt 18925279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 27096093 - 27096060
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaa 188  Q
    ||||||||||||||||||||| ||||||||||||    
T  27096093 aaaatcgcacaattagcaaaatataggggggaaa 27096060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 27182210 - 27182243
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaa 188  Q
    ||||||||||||||||||||| ||||||||||||    
T  27182210 aaaatcgcacaattagcaaaatataggggggaaa 27182243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 5735430 - 5735398
Alignment:
Q  25 agggtgcaaaatcgcacaattagcaaaaagata 57  Q
    ||||||||||||||||||||| |||||||||||    
T  5735430 agggtgcaaaatcgcacaattggcaaaaagata 5735398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 9035293 - 9035337
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  9035293 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 9035337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 10533088 - 10533044
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 10533044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 13863964 - 13864000
Alignment:
Q  156 aaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  13863964 aaatcgcacaattggcaaaagataggggtgaaaagtg 13864000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 54
Target Start/End: Complemental strand, 15567045 - 15567017
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaag 54  Q
    |||||||||||||||||||||||||||||    
T  15567045 gggtgcaaaatcgcacaattagcaaaaag 15567017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 20418942 - 20418898
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  20418942 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 20418898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 33628660 - 33628704
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||||| ||||||||| ||| |||||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtg 33628704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 37888887 - 37888843
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  37888887 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 37888843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 37889259 - 37889303
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  37889259 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 37889303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 37972396 - 37972440
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  37972396 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 37972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 38191435 - 38191388
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||    
T  38191435 ggtgcaaaatcgcacaattggcaaaaagatagggga-aaaagtgcaatt 38191388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 115; Significance: 1e-58; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 1286 - 1464
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1286 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 1385  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         ||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  1386 aagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtg 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 1175 - 1128
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  1175 gagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtg 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 1e-58; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 47955494 - 47955316
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  47955494 aatataattgagggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaa 47955395  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  47955394 aagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 47955316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 17518470 - 17518638
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17518470 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 17518569  T
Q  115 aagatgggtagcaaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||| ||||||| ||||        ||||||||| |||||||||||||| |||||||||||||||    
T  17518570 aagatgggt-gcaaaattgctcaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggg 17518638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 191
Target Start/End: Complemental strand, 41083096 - 41082920
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  41083096 aatataagtgagggtgcaaaatcgcacaattagtaaaaagataaggggcaaaagtacaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 41082997  T
Q  115 aagatgggtagcaaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagt 191  Q
    ||||||||  |||||||||||         |||||| || |||||||||||||| ||||||||||||||| ||||||    
T  41082996 aagatggggtgcaaaatcgctaaaaaaaaagaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagt 41082920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 22149580 - 22149743
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  22149580 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatggggtgcaaaatcagaaagggg-caaaaagatggggtgc 22149678  T
Q  127 aaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||||          ||| |||| ||||||||||||||||||||||||||||||||||||||    
T  22149679 aaaatcgct-aaaaaaaaaaggaggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 22149743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 8108888 - 8109007
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  8108888 aatataagtgagggtgtaaaatcgcacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaa 8108987  T
Q  115 aagatgggtagcaaaatcgc 134  Q
    ||||||||  ||||||||||    
T  8108988 aagatggggtgcaaaatcgc 8109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 8108993 - 8109037
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 8109037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 13589656 - 13589695
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  13589656 gagggggtgcaaaatcgcacaattagcaaaagataggggg 13589695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 47955605 - 47955652
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||    
T  47955605 gagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtg 47955652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 8108777 - 8108731
Alignment:
Q  146 agggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||    
T  8108777 agggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtg 8108731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 31848067 - 31847905
Alignment:
Q  29 tgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgca--aaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||| |||||||||||  || | ||||||||||| |||||||  |   ||| ||  ||| |||||||||| ||||||||| ||  ||    
T  31848067 tgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattaaacacaagaa---ggtccatcaaaccagaaagggggcaaaaagatcgggtgc 31847971  T
Q  127 aaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||         | ||| || ||||| ||||||||||||||||||| ||||| ||||||    
T  31847970 aaaatcgctcaaaaaaaatatgggatgcaaaattgcacaattagcaaaagataagggggtaaagtg 31847905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 48190825 - 48190781
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 48190781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 49284463 - 49284419
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  49284463 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 49284419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 31848189 - 31848236
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  31848189 gagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtg 31848236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 1177016 - 1177062
Alignment:
Q  146 agggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||| ||||| ||||||||||| |||||||||| |||||||||    
T  1177016 agggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtg 1177062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 1176763 - 1176730
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaa 188  Q
    ||||||||||||||||||||| ||||||||||||    
T  1176763 aaaatcgcacaattagcaaaatataggggggaaa 1176730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 8108899 - 8108943
Alignment:
Q  149 gggtgtaaaatcgcacaattagc-aaaagataggggggaaaagtg 192  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||    
T  8108899 gggtgtaaaatcgcacaattagcaaaaagatatggggcaaaagtg 8108943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 9347180 - 9347136
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  9347180 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 9347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 32163043 - 32163087
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  32163043 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 32163087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 39692000 - 39692044
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||||||||||  ||||| ||||||||||||||||    
T  39692000 ggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtg 39692044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 44911079 - 44911035
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||| ||||||||| ||||||    
T  44911079 ggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtg 44911035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 48191355 - 48191399
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||| ||| |||||||||||||| ||||||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtg 48191399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 50430081 - 50430125
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  50430081 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 50430125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 5e-58; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 20968886 - 20969063
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20968886 aatataagtgagggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 20968985  T
Q  115 aagatgggtagcaaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         | |||||| |||||||||||||| |||||||||||||||||||||||    
T  20968986 aagatggggtgcaaaatcgctcaaaaaaaaaaaggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 20969063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 10293795 - 10293627
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  10293795 aatataagtgagggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagat-gggtgcaaaatcagaaagggggcaaa 10293697  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
    ||||||||  ||||||||||||         ||||||||| ||||||||||||||  |||||||||||||    
T  10293696 aagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagatagggg 10293627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 18875065 - 18874957
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 18874966  T
Q  127 aaaatcgct 135  Q
    |||||||||    
T  18874965 aaaatcgct 18874957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 9026907 - 9026800
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagca 127  Q
    |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| |||| |||||||||||||||||  |||||||||||  |||    
T  9026907 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagacggggggcaaaatcagaaagggg-gaaaaagatggggtgca 9026809  T
Q  128 aaatcgctc 136  Q
    |||||||||    
T  9026808 aaatcgctc 9026800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 3644721 - 3644795
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatc 100  Q
    ||||||||||||||||||||||||| | ||||  || | ||||||||||| ||||||||||||||||||||||||    
T  3644721 gggtgcaaaatcgcacaattagcaagaggatagagggcaaaagtgcaattaaacacaaagatggggtgcaaaatc 3644795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 13657622 - 13657679
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||||    
T  13657622 gggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaaacacaa 13657679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 10293906 - 10293953
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10293906 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 10293953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 45060872 - 45060915
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtg 45060915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 18874935 - 18874892
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtg 18874892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 18875188 - 18875235
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  18875188 gagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtg 18875235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 20968775 - 20968732
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaa 188  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  20968775 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaa 20968732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 9027033 - 9027077
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtga 193  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||    
T  9027033 ggggtgtaaaattgcacaattagcaaaagata-gggggaaaagtga 9027077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 26540872 - 26540905
Alignment:
Q  151 gtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||||||||||||||||||||||||||||    
T  26540872 gtgtaaaatcgcacaattagcaaaagataggggg 26540905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 45060774 - 45060830
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaa 84  Q
    |||||||||||| |||||| |||||||||| |||| | ||||||||||||||||||||    
T  45060774 ggtgcaaaatcgaacaattggcaaaaagat-aggggcaaaagtgcaattgaacacaaa 45060830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 184
Target Start/End: Original strand, 47871121 - 47871158
Alignment:
Q  147 gggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  47871121 gggggtgcaaaatcgcacaattagcaaaagataggggg 47871158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 4947433 - 4947377
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaa 84  Q
    |||||||||||||||||| |||||||||||  || | ||||||||||||| ||||||    
T  4947433 gtgcaaaatcgcacaattggcaaaaagatagagggcaaaagtgcaattgagcacaaa 4947377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 1101091 - 1101148
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaa 84  Q
    ||||||||||||||||||||  ||||||||| |||| | ||||||||||| ||||||||    
T  1101091 gggtgcaaaatcgcacaattgacaaaaagat-aggggcaaaagtgcaattaaacacaaa 1101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 17372354 - 17372316
Alignment:
Q  146 agggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  17372354 agggggtgcaaaatcgcacaattagcaaaaaataggggg 17372316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 1928434 - 1928475
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||| |||||||||||||| ||||||||||||| ||||||    
T  1928434 ggggtgcaaaatcgcacaattggcaaaagatagggaggaaaa 1928475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 14015964 - 14015997
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagatagg 181  Q
    |||||| |||||||||||||||||||||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagatagg 14015997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 17372474 - 17372531
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    |||||||||||||||||||| ||||||||||| ||  | ||||||| ||| |||||||    
T  17372474 gggtgcaaaatcgcacaattggcaaaaagatagggtgcaaaagtgccattaaacacaa 17372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 45060643 - 45060606
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  45060643 aaaatcgcataattagcaaaagatagtggggaaaagtg 45060606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 18874936 - 18874885
Alignment:
Q  25 agggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattga 77  Q
    |||||||||||||||||||||||| |||||||| |||   |||||||||||||    
T  18874936 agggtgcaaaatcgcacaattagc-aaaagatagggggaaaaagtgcaattga 18874885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 47871117 - 47871149
Alignment:
Q  20 aagtgagggtgcaaaatcgcacaattagcaaaa 52  Q
    ||||| |||||||||||||||||||||||||||    
T  47871117 aagtgggggtgcaaaatcgcacaattagcaaaa 47871149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 48159951 - 48159907
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  48159951 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 48159907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 3e-56; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 15156051 - 15156229
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15156051 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 15156150  T
Q  115 aagatgggtagcaaaatcgct-cnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  |||||||||||          ||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  15156151 aagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtg 15156229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 765922 - 765744
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  765922 aatataagtgagggtgcaaaatcgcacggttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaa 765823  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  765822 aagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 765744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 12281312 - 12281134
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  12281312 aatataagtgagggtgcaaaatcgcacagttagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatctgaaagggggcaaa 12281213  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         |||| |||| |||||||||||||| |||||||||||||||||||||||    
T  12281212 aagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 12281134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 41662269 - 41662447
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  41662269 aatataagtgaaggtgtaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagataaggtgcaaaatcagaaagggggcaaa 41662368  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||         ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  41662369 aagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 41662447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 43246047 - 43245881
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  43246047 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgtaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 43245948  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||         ||||||||| ||||||||||||||| |||||||||||||| |||||||    
T  43245947 aaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtg 43245881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 120
Target Start/End: Original strand, 43162403 - 43162508
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43162403 aatataagtgaggatgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 43162502  T
Q  115 aagatg 120  Q
    ||||||    
T  43162503 aagatg 43162508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 16929115 - 16928952
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||| |||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  16929115 ggtgcaaaatctcacaattaacaaaaagataaggggcaaaagtgcaatt-aacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 16929017  T
Q  127 aaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||| |||||        ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  16929016 aaaa-cgctcaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtg 16928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 34313930 - 34314047
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  34313930 aatataagtgagggtgcaaaatcgtacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaaaggggcaaa 34314029  T
Q  115 aagatgggtagcaaaatc 132  Q
    ||||||||  ||||||||    
T  34314030 aagatggggtgcaaaatc 34314047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 37752290 - 37752181
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  37752290 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 37752191  T
Q  127 aaaatcgctc 136  Q
    ||||||||||    
T  37752190 aaaatcgctc 37752181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 74864 - 75016
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagca 127  Q
    ||||||||||||||||||  |||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||  |||    
T  74864 gtgcaaaatcgcacaattgacaaaaagataggggacaaaagtgcaattaaacacaaagatgtggtgcaaaatcagaaagggggcaaaaagatggggtgca 74963  T
Q  128 aaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagatag 180  Q
    ||||||||         ||||||||| ||||||||||||||||||||||||||    
T  74964 aaatcgctaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatag 75016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 18019964 - 18019872
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaaga 118  Q
    |||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18019964 gggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaattgaacacaaagatgcggtgcaaaatcagaaagggggcaaaaaga 18019872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 9465755 - 9465675
Alignment:
Q  20 aagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatc 100  Q
    ||||| ||||||||||||||||| |||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||    
T  9465755 aagtgggggtgcaaaatcgcacagttagcaaaaagatagggggcaaaagtgcaattgaacacaaagatagggtgcaaaatc 9465675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 37670132 - 37670222
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaa 116  Q
    |||||||||||| ||||||||||||||| ||| || || ||| ||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  37670132 gggtgcaaaatcacacaattagcaaaaaaatatggtacaaaaatgcaattaaacacaaagatggggtgctaaatcagaaagggggcaaaaa 37670222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 7127828 - 7127936
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtag 125  Q
    |||||||||||| | ||||||||||||||||| |||   |||||||||||||||||||| ||||| |||||||||||||| |||  |||||||| ||  |    
T  7127828 gggtgcaaaatcacgcaattagcaaaaagatagggggtaaaagtgcaattgaacacaaaaatgggatgcaaaatcagaaaaggggtaaaaagatagggtg 7127927  T
Q  126 caaaatcgc 134  Q
    |||||||||    
T  7127928 caaaatcgc 7127936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 33748161 - 33748236
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaaga--taagggacgaaagtgcaattgaacacaaagatggggtgcaaaat 99  Q
    |||||||||||||||||||||||||||| |  || ||| | |||||||||||||||||||||||| ||||||||||    
T  33748161 gggtgcaaaatcgcacaattagcaaaaaaaaatagggggcaaaagtgcaattgaacacaaagatgaggtgcaaaat 33748236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 15155940 - 15155893
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15155940 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 15155893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 16929239 - 16929286
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  16929239 gagggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtg 16929286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 37752413 - 37752460
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  37752413 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 37752460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 43246173 - 43246220
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  43246173 gagggggtgcaaaatcacacaattagcaaaagataggggggaaaagtg 43246220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 37752138 - 37752094
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtg 37752094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 12281423 - 12281470
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  12281423 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtg 12281470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 43597957 - 43597892
Alignment:
Q  36 tcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatca 101  Q
    |||||||||||||||||||||| ||| | ||||  ||||||||||||||| || | ||||||||||    
T  43597957 tcgcacaattagcaaaaagatagggggcaaaagcacaattgaacacaaagttgagatgcaaaatca 43597892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 9823361 - 9823405
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  9823361 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 9823405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 13027281 - 13027325
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  13027281 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 13027325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 23123392 - 23123348
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||    
T  23123392 ggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtg 23123348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 39724048 - 39724092
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  39724048 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 39724092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 3463946 - 3463989
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||| || |||||||||||||||||| ||||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtg 3463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 22786989 - 22786930
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    |||||||||||||||||||| |  |||| ||||||||| | ||||||||||| |||||||    
T  22786989 gagggtgcaaaatcgcacaactgacaaatagataaggggcaaaagtgcaattaaacacaa 22786930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 23123514 - 23123553
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  23123514 gagggggtgcaaaatcgcacaattagcaaaagataagggg 23123553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 7127708 - 7127670
Alignment:
Q  146 agggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||| || ||||||||||||||||||||||||||||||    
T  7127708 aggggatgcaaaatcgcacaattagcaaaagataggggg 7127670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Complemental strand, 13026687 - 13026645
Alignment:
Q  150 ggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||| |||||||||||||| |||||||||||||| ||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 13026645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 23123518 - 23123564
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  23123518 gggtgcaaaatcgcacaattagc-aaaagataaggg--gaaagtgcaatt 23123564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 34313820 - 34313782
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  34313820 gagggggtgcaaaatcgcacaattaacaaaagatagggg 34313782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 183
Target Start/End: Original strand, 43598756 - 43598790
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
    ||||| |||||||||||||||||||||||||||||    
T  43598756 gggtgcaaaatcgcacaattagcaaaagatagggg 43598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 9465871 - 9465908
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggg 182  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  9465871 gagggggtgcaaaatcgcacaattaacaaaagataggg 9465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 16928995 - 16928947
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    ||||||||||||||||||||||| |||||||| |||  ||||||||||||    
T  16928995 gggtgcaaaatcgcacaattagc-aaaagatagggggggaaagtgcaatt 16928947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 16929243 - 16929291
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    ||||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  16929243 gggtgcaaaatcgcacaattagc-aaaagataggggagaaaagtgcaatt 16929291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 18020085 - 18020122
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggg 182  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  18020085 gagggggtgcaaaatcgcacaattaacaaaagataggg 18020122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 74739 - 74696
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||||||||||||| || ||||||||||    
T  74739 ggggtgcaaaatcgcacaattagcaaaagat-ggagggaaaagtg 74696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 11007707 - 11007651
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    |||| |||||||||||||| ||||||||||| ||  | ||||||||||| |||||||    
T  11007707 ggtgtaaaatcgcacaattggcaaaaagatagggagcaaaagtgcaattaaacacaa 11007651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 18019968 - 18019920
Alignment:
Q  145 gagggggtgtaaaatcgcacaatta-gcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| | ||||||||||||| |||||||    
T  18019968 gagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtg 18019920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 22851444 - 22851400
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||||||||||  ||||||||||||| ||||||||    
T  22851444 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtg 22851400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 25438846 - 25438802
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  25438846 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 25438802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 34498555 - 34498599
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  34498555 ggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtg 34498599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 43598754 - 43598782
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaa 52  Q
    |||||||||||||||||||||||||||||    
T  43598754 gagggtgcaaaatcgcacaattagcaaaa 43598782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 3403867 - 3404033
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  3403867 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 3403966  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3403967 aaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 3404033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 18242022 - 18242190
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18242022 aatataagtgagggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 18242121  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggg 182  Q
    ||||||||  ||||||||||||         ||||||||| |||||||||||||| |||||||||||||    
T  18242122 aagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggg 18242190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 30388242 - 30388405
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||  ||    
T  30388242 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggtaaaaagatggggtgc 30388341  T
Q  127 aaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagt 191  Q
    ||||||||||         |||||||| |||||||||||||||||||||||||||||| ||||||    
T  30388342 aaaatcgctcaaaaaaaa-agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagt 30388405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 2762660 - 2762500
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtag 125  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |  |    
T  2762660 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcaaaaagggggcaaaaagatgaggtg 2762561  T
Q  126 caaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagatagggggg 185  Q
    ||||||| |||         ||||||||| ||||||||||||||||||||| || ||||||    
T  2762560 caaaatcactcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaaaattgggggg 2762500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 182
Target Start/End: Original strand, 13579529 - 13579685
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtag 125  Q
    ||||||| ||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||||||||||| ||||||||| |||||| |||||  |    
T  13579529 gggtgcagaattgcacaattagcaaaaatatagggggcaaaagtgcaattgaacacaaatatggggtgcaaaataagaaaggggccaaaaaaatggggtg 13579628  T
Q  126 caaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggg 182  Q
    ||||||||||         ||||||||| |||||||||||||||||||| |||||||    
T  13579629 caaaatcgctaaaaaaaacgagggggtgcaaaatcgcacaattagcaaacgataggg 13579685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 26 - 100
Target Start/End: Original strand, 10039844 - 10039918
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatc 100  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  10039844 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 10039918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 11656657 - 11656583
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatc 100  Q
    ||||||||||||||||||||| ||||| |||| ||| | ||||||||||||||||||||||||||||||||||||    
T  11656657 gggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 11656583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 33972188 - 33972249
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaag 85  Q
    |||||||||||||| ||||||||||||||||||| ||| | |||||||||||||||||||||    
T  33972188 gagggtgcaaaatctcacaattagcaaaaagatatggggcaaaagtgcaattgaacacaaag 33972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 3403771 - 3403727
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 3403727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 18241911 - 18241864
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18241911 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 18241864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 11656779 - 11656826
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  11656779 gagggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtg 11656826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 33658618 - 33658560
Alignment:
Q  25 agggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    |||||||||||| |||||||| |||||||||||| || | ||||||||||| |||||||    
T  33658618 agggtgcaaaattgcacaattggcaaaaagataaagggcaaaagtgcaattaaacacaa 33658560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 21032081 - 21031996
Alignment:
Q  100 cagaaaggggacaaaaagatgggtagcaaaatcgctcnnnnnnnn-gagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    |||||||||| ||||||||||||  ||||||||||||         ||||||||| |||||||||||||||||||||| |||||||    
T  21032081 cagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagttaggggg 21031996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 21032287 - 21032324
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  21032287 aaaatcgcacaattaacaaaagataggggggaaaagtg 21032324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 30388108 - 30388075
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaa 188  Q
    ||||||||||||||||||||||||||||||||||    
T  30388108 aaaatcgcacaattagcaaaagataggggggaaa 30388075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 2762664 - 2762616
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagc-aaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  2762664 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtg 2762616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 10039729 - 10039693
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    |||||| ||||||||||||||||||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagataggggg 10039693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 10039840 - 10039888
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagc-aaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  10039840 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtg 10039888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 33829044 - 33829000
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  33829044 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 33829000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 33829636 - 33829680
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  33829636 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 33829680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 3825583 - 3825544
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  3825583 gagggggtgcaaaatcgcacaattagcaaaatataggggg 3825544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 12714488 - 12714441
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| || ||||||||||||||| |||||||||||||| |||||||    
T  12714488 gaggggctgcaaaatcgcacaattaacaaaagatagggggcaaaagtg 12714441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 31598274 - 31598314
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    ||||| |||||||||||||||||||||||||| ||| ||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagatagagggaaaaa 31598314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 3e-56; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 3930346 - 3930516
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  3930346 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattggacacaaagatggggtgcaaaatcagaaagggggcaaa 3930445  T
Q  115 aagatgggtagcaaaatcgct-cnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||  |||||||||||          ||||||||| ||||||||||||||||||||||||||||||    
T  3930446 aagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggg 3930516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 13198792 - 13198613
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  13198792 aatataagtgagggtgcaaaatcgcacaattagaaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaa 13198693  T
Q  115 aagatgggtagcaaaatcgctc--nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||          ||||||||| |||||||||||||| ||||||||||  || ||||||||    
T  13198692 aagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtg 13198613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 16555695 - 16555861
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||  ||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaattgaacacaaagatggggtgtaaaatcagaaagggggcaaaaagatggggtgc 16555794  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||         || |||||| ||||||||||||||||||||||||| ||||||||||||    
T  16555795 aaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtg 16555861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 11241558 - 11241673
Alignment:
Q  17 tataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  11241558 tataagtgagggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgaaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaa 11241657  T
Q  117 gatgggtagcaaaatc 132  Q
    ||||||  ||||||||    
T  11241658 gatggggtgcaaaatc 11241673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 22681767 - 22681651
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  22681767 aatataagtgaatgtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaattagaaagggg-caaa 22681669  T
Q  115 aagatgggtagcaaaatc 132  Q
    ||||||||  ||||||||    
T  22681668 aagatggggtgcaaaatc 22681651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 5206138 - 5206244
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagca 127  Q
    |||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||    
T  5206138 gtgcaaaatcgcacaattagcaaaaagatagggggaagaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatagggtgca 5206237  T
Q  128 aaatcgc 134  Q
    |||||||    
T  5206238 aaatcgc 5206244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 8488363 - 8488255
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggt 123  Q
    ||||||||||||| |||||||||||||||| ||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||     
T  8488363 gagggtgcaaaattgcacaattagcaaaaacatagggggcaaaagtgcaattgaacacaaagacggggtgcaaaatcagaaagggga-aaaaaaatgggc 8488265  T
Q  124 agcaaaatcg 133  Q
     |||||||||    
T  8488264 tgcaaaatcg 8488255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 35393651 - 35393548
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagca 127  Q
    |||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||| ||||||||||||| |||||||  |||||||||||  |||    
T  35393651 gtgcaaaatcgcacaattagcaaaaagatagggggcaaaagttcaattgaacacaaagatagggtgcaaaatcaaaaagggggtaaaaagatggggtgca 35393552  T
Q  128 aaat 131  Q
    ||||    
T  35393551 aaat 35393548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 27304894 - 27304984
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaa 116  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||||||||| |||| |||||||||||||||||||| ||| ||||||    
T  27304894 gggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaattgaactcaaatatggggtgcaaaatcagaaaaggggcaaaaa 27304984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 49178693 - 49178636
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    |||||||||||||||||||| ||||||||||| ||| | |||||||||||||||||||    
T  49178693 gggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaattgaacacaa 49178636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 13198903 - 13198950
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  13198903 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 13198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 56505747 - 56505703
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtg 56505703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 16555572 - 16555525
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  16555572 gagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtg 16555525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 18077199 - 18077246
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  18077199 gagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtg 18077246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 49178813 - 49178860
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  49178813 gagggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtg 49178860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 27304890 - 27304938
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagc-aaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  27304890 gagggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtg 27304938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 36096475 - 36096519
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  36096475 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 36096519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 45830196 - 45830240
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||    
T  45830196 ggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtg 45830240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 50678833 - 50678789
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  50678833 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 50678789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 22681631 - 22681588
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaa 188  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaa 22681588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Complemental strand, 27304773 - 27304735
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
    ||||||||| |||||||||||||||||| ||||||||||    
T  27304773 gagggggtgcaaaatcgcacaattagcagaagatagggg 27304735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 8182045 - 8181996
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    |||||||||||||||||||| |||||| |||| ||| | |||||||||||    
T  8182045 gggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaatt 8181996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 8182173 - 8182222
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    |||||||||||||||||||||||||||| ||| |||   |||||||||||    
T  8182173 gggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaatt 8182222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 16555818 - 16555866
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaatt 75  Q
    ||||||||||||||||||||||| ||||||||||||   |||||||||||    
T  16555818 gggtgcaaaatcgcacaattagc-aaaagataagggggaaaagtgcaatt 16555866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 35393773 - 35393810
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggg 182  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  35393773 gagggggtgcaaattcgcacaattagcaaaagataggg 35393810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 36095871 - 36095830
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  36095871 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaa 36095830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 39415277 - 39415244
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggg 182  Q
    ||||| ||||||||||||||||||||||||||||    
T  39415277 gggtgcaaaatcgcacaattagcaaaagataggg 39415244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 53
Target Start/End: Original strand, 54509114 - 54509143
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaa 53  Q
    ||||||||||||||||||||||||||||||    
T  54509114 gagggtgcaaaatcgcacaattagcaaaaa 54509143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 8182049 - 8182001
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaa-gataggggggaaaagtg 192  Q
    ||||||||| |||||||||||||| |||||| ||||||||| |||||||    
T  8182049 gagggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtg 8182001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 24775783 - 24775827
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||||||||||  ||||||||||| ||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtg 24775827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 25161932 - 25161888
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  25161932 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 25161888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 28196400 - 28196356
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  28196400 ggggtgcaaaatcgcacaattggcaaattataggggggaaaagtg 28196356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 28196773 - 28196817
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  28196773 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 28196817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 32703650 - 32703694
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  32703650 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 32703694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 52
Target Start/End: Complemental strand, 39415279 - 39415251
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaa 52  Q
    |||||||||||||||||||||||||||||    
T  39415279 gagggtgcaaaatcgcacaattagcaaaa 39415251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 50679424 - 50679468
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| ||||||| |||||| |||||||||||||| ||||||||    
T  50679424 ggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtg 50679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 54509116 - 54509156
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    ||||| ||||||||||||||||||||| |||||||| ||||    
T  54509116 gggtgcaaaatcgcacaattagcaaaaaatagggggaaaaa 54509156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 25247 - 25413
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||    
T  25247 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaatggggcaaaaagatggggtgc 25346  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25347 aaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 25413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 8e-54; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 18433191 - 18433025
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  18433191 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 18433092  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||         || |||||| ||||||||||||||||||||||||||||||||||||||    
T  18433091 aaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 18433025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 25115945 - 25115767
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25115945 aatataagtgagggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 25115846  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||          |||||||| |||||| ||||||| |||||||||||||||||||||||    
T  25115845 aagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtg 25115767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 25175037 - 25174859
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25175037 aatataagtgagggtgcaaaatcgcacaattagcaaaatgataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaa 25174938  T
Q  115 aagatgggtagcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||  ||||||||||||          |||||||| |||||| ||||||| |||||||||||||||||||||||    
T  25174937 aagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtg 25174859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 188
Target Start/End: Complemental strand, 34577040 - 34576880
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagca 127  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||  |||    
T  34577040 gtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattaaacacaaagatggggtggaaaatcagaaagggggcaaaaagatggggtgca 34576941  T
Q  128 aaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaa 188  Q
    |||||||||        || |||||||||||||||||||||||||||||||||||||||||    
T  34576940 aaatcgctcaaaaaaaagatggggtgtaaaatcgcacaattagcaaaagataggggggaaa 34576880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 26020625 - 26020460
Alignment:
Q  28 gtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagca 127  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  |||    
T  26020625 gtgcaaaatcgcacaattaacaaaaagataagggacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatgcggtgca 26020526  T
Q  128 aaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||||         || |||||| |||||||||||||||||||||||||||| |||||||||    
T  26020525 aaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtg 26020460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 5187699 - 5187591
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtag 125  Q
    |||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |    
T  5187699 gggtacaaaatcgcataattagcaaaaagataggggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaaggggacaaaaagatggggtg 5187600  T
Q  126 caaaatcgc 134  Q
    |||||||||    
T  5187599 caaaatcgc 5187591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 5779742 - 5779834
Alignment:
Q  29 tgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgg 121  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| ||| | ||||||||||||||| ||| ||||||||||    
T  5779742 tgcaaaatcgcacaattagcaaaaagataggagacaaaagtgcaattgaacacaaaaatgagatgcaaaatcagaaagaggaaaaaaagatgg 5779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 22429141 - 22429210
Alignment:
Q  65 aaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagcaaaatcgc 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  22429141 aaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgcaaaatcgc 22429210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 9665700 - 9665598
Alignment:
Q  29 tgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagcaa 128  Q
    |||| |||||||||||||||||||||||| ||| | |||   |||||||||||||||||| |||||||||||||||||||  ||||||||||||  ||||    
T  9665700 tgcagaatcgcacaattagcaaaaagatagggggcaaaaacacaattgaacacaaagatgaggtgcaaaatcagaaagggagcaaaaagatggggtgcaa 9665601  T
Q  129 aat 131  Q
    |||    
T  9665600 aat 9665598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 18433313 - 18433360
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  18433313 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 18433360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 25175148 - 25175195
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  25175148 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 25175195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 25116060 - 25116105
Alignment:
Q  147 gggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  25116060 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtg 25116105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 22428987 - 22428947
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaa 188  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  22428987 ggggtgcaaaatcgcacaattagcaaaagataggggggaaa 22428947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 16466749 - 16466786
Alignment:
Q  155 aaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  16466749 aaaatcgcacaattagcaaaatataggggggaaaagtg 16466786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 22429196 - 22429237
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaa 22429237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 18817611 - 18817655
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  18817611 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtg 18817655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 41382945 - 41382905
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa 41382905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 16726135 - 16726088
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||| |||| |||||||||||||| ||||||||||||||| |||||||    
T  16726135 gaggaggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtg 16726088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 12441196 - 12441249
Alignment:
Q  31 caaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaa 84  Q
    |||||||||||||||  |||||||||| ||| | ||||||||||| ||||||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaacacaaa 12441249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 18817006 - 18816965
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaa 18816965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 37780744 - 37780785
Alignment:
Q  150 ggtgtaaaatcgcacaattagcaaaagataggggggaaaagt 191  Q
    |||| ||||||||||||||||||||  |||||||||||||||    
T  37780744 ggtgcaaaatcgcacaattagcaaactataggggggaaaagt 37780785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 41383047 - 41383203
Alignment:
Q  25 agggtgcaaaatcgcacaattagcaaaaagata-agggacgaaagtgcaattgaacacaaagatggggtgca--aaatcagaaaggggacaaaaagatgg 121  Q
    |||||||||||||||||||||||| |||| | | ||||  |||||||||||| |||||||  |   | | ||  |||| |||||||||||||||||||||    
T  41383047 agggtgcaaaatcgcacaattagccaaaaaaaataggggggaaagtgcaattaaacacaagaa---gatccatcaaatgagaaaggggacaaaaagatgg 41383143  T
Q  122 gtagcaaaatcgctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    |  |||||||||||          | |||||| ||||||||||||||||||||| ||||||||    
T  41383144 gatgcaaaatcgctaaaaaaa---aaggggtgcaaaatcgcacaattagcaaaaaataggggg 41383203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 9869739 - 9869795
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacaca 82  Q
    |||||||||||||||||||| | ||||||| | ||| | ||||||||||| ||||||    
T  9869739 gggtgcaaaatcgcacaattggtaaaaagacagggggcaaaagtgcaattaaacaca 9869795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 11351427 - 11351471
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||||||||| | ||||||||    
T  11351427 ggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtg 11351471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 12498621 - 12498577
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  12498621 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 12498577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 12498928 - 12498972
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  12498928 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 12498972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 21207280 - 21207236
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  21207280 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 21207236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 23011131 - 23011091
Alignment:
Q  149 gggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    ||||| ||||||||||||||||||||||||| |||| ||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaa 23011091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 26571164 - 26571208
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| |||||||||||||| |||||  ||||||||||||||||    
T  26571164 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtg 26571208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 6575 - 6733
Alignment:
Q  27 ggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagc 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||    
T  6575 ggtgcaaaatcgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaaaaagatggggtgc 6674  T
Q  127 aaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||||         ||||||||| ||||||||||||||||||||||||||||||    
T  6675 aaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggg 6733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 6451 - 6404
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6451 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 6404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 45683 - 45843
Alignment:
Q  25 agggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggta 124  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||      
T  45683 agggtgcaaaatcgcacaattagcaaaaagataagggacaaaagtgcaattgaacacaaagatgaggtgcaaaatcagaaagggggcaaaaagatggggt 45782  T
Q  125 gcaaaatcgctc-nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||||||||||||         ||||||||| |||||||||||||| |||||||||||||||    
T  45783 gcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggg 45843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 1669 - 1552
Alignment:
Q  15 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||     
T  1669 aatataagtgagggtgcaaaatcgcacaattagcaaaaagataagagacaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggggcaat 1570  T
Q  115 aagatgggtagcaaaatc 132  Q
    ||||||||  ||||||||    
T  1569 aagatggggtgcaaaatc 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 34 - 184
Target Start/End: Complemental strand, 412090 - 411940
Alignment:
Q  34 aatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggtagcaaaatcg 133  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||  |||||||||    
T  412090 aatcgcacaattagcaaaaagatagggggcaaaagtgcaattgaacacaaagatagggtgcaaaatcagaaagggggcaaaaagatagggtgcaaaatcg 411991  T
Q  134 ctcnnnnnnnngagggggtgtaaaatcgcacaattagcaaaagataggggg 184  Q
    ||         ||||||||| ||||||||||||||  ||||||||||||||    
T  411990 cttaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggg 411940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 6752 - 6848
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatggg 122  Q
    ||||||||||||  | |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  6752 gggtgcaaaatcatagaattagcaaaaaaataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatcagaaagggagcaaaaagatggg 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 17032 - 16870
Alignment:
Q  24 gagggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatcagaaaggggacaaaaagatgggt 123  Q
    ||||||||||||||| ||||||||  |||||||| ||||| |||||||||||||||| ||||| || ||||||||||||||||||   |||||||||||     
T  17032 gagggtgcaaaatcgtacaattagagaaaagataggggacaaaagtgcaattgaacaaaaagacggagtgcaaaatcagaaagggaggaaaaagatgggg 16933  T
Q  124 agcaaaatcgctc---nnnnnnnngagggggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
     ||||||||||||           ||||||||| | |||||||||||||||||||||||||||    
T  16932 tgcaaaatcgctcaaaaaaaaaaagagggggtgcataatcgcacaattagcaaaagatagggg 16870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 9e-26; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 439072 - 439001
Alignment:
Q  29 tgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaaagatggggtgcaaaatc 100  Q
    |||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  439072 tgcaaaattgcacaattagcaaaaagataaggggcaaaagtgcaattgaacacaaagatggggtgcaaaatc 439001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 438987 - 438940
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  438987 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtg 438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 192
Target Start/End: Original strand, 183670 - 183706
Alignment:
Q  156 aaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||||||||||||||||| ||||||||||||||||    
T  183670 aaatcgcacaattagcaaaatataggggggaaaagtg 183706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 439196 - 439243
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    |||||| || ||||||||||||||||||||||||| |||| |||||||    
T  439196 gaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtg 439243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 183544 - 183598
Alignment:
Q  29 tgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaacacaa 83  Q
    ||||||||||||||||| | ||||||||| ||| | ||||||||||| |||||||    
T  183544 tgcaaaatcgcacaattggtaaaaagatagggggcaaaagtgcaattaaacacaa 183598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 6206 - 6162
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaagtg 192  Q
    ||||||||||||||||||||||||||||||||| || ||||||||    
T  6206 ggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtg 6162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 6795 - 6836
Alignment:
Q  148 ggggtgtaaaatcgcacaattagcaaaagataggggggaaaa 189  Q
    |||||| |||||||||||||| |||||||||||||| |||||    
T  6795 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaa 6836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 205743 - 205706
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagataggg 182  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  205743 gagggggtgcaaaatcgcacaattagcaaaagataggg 205706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 7597 - 7635
Alignment:
Q  145 gagggggtgtaaaatcgcacaattagcaaaagatagggg 183  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  7597 gagggggtacaaaatcgcacaattagcaaaagatagggg 7635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 73140 - 73086
Alignment:
Q  26 gggtgcaaaatcgcacaattagcaaaaagataagggacgaaagtgcaattgaaca 80  Q
    ||||||||||||||||| ||  |||||||||| ||||| ||||||||||| ||||    
T  73140 gggtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaaaca 73086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University