View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18787_low_11 (Length: 318)

Name: NF18787_low_11
Description: NF18787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18787_low_11
NF18787_low_11
[»] scaffold0553 (1 HSPs)
scaffold0553 (9-240)||(10148-10380)
[»] scaffold0544 (1 HSPs)
scaffold0544 (9-240)||(1478-1710)
[»] chr3 (27 HSPs)
chr3 (9-240)||(23370458-23370690)
chr3 (57-240)||(9534199-9534382)
chr3 (57-234)||(14762758-14762936)
chr3 (59-234)||(20247791-20247967)
chr3 (59-236)||(24192830-24193009)
chr3 (59-234)||(38310802-38310978)
chr3 (48-166)||(24933820-24933937)
chr3 (59-238)||(55499104-55499285)
chr3 (56-237)||(16801467-16801648)
chr3 (9-111)||(17131732-17131834)
chr3 (56-138)||(41455097-41455178)
chr3 (9-111)||(13302195-13302295)
chr3 (9-111)||(14865846-14865948)
chr3 (9-111)||(13312851-13312951)
chr3 (9-111)||(12033398-12033499)
chr3 (9-111)||(13323742-13323842)
chr3 (57-118)||(18929239-18929300)
chr3 (57-121)||(17240513-17240577)
chr3 (41-166)||(10389428-10389553)
chr3 (41-166)||(10414517-10414642)
chr3 (41-166)||(10421187-10421312)
chr3 (51-111)||(51301589-51301649)
chr3 (55-91)||(23392818-23392854)
chr3 (59-113)||(16801027-16801081)
chr3 (51-109)||(19235063-19235121)
chr3 (55-92)||(2247648-2247685)
chr3 (55-91)||(52212430-52212466)
[»] chr5 (19 HSPs)
chr5 (56-240)||(38144536-38144720)
chr5 (57-240)||(28370055-28370238)
chr5 (57-240)||(19512257-19512441)
chr5 (56-234)||(22751018-22751197)
chr5 (56-166)||(23528577-23528686)
chr5 (9-111)||(19236900-19237002)
chr5 (57-121)||(18407944-18408008)
chr5 (9-109)||(22461158-22461258)
chr5 (9-109)||(22467782-22467882)
chr5 (55-112)||(22438746-22438803)
chr5 (57-121)||(23111200-23111264)
chr5 (51-111)||(20781744-20781804)
chr5 (51-111)||(20772969-20773029)
chr5 (51-110)||(34830086-34830144)
chr5 (55-85)||(17021912-17021942)
chr5 (9-111)||(28909243-28909344)
chr5 (9-111)||(28945638-28945739)
chr5 (55-91)||(21663141-21663177)
chr5 (55-91)||(22356902-22356938)
[»] scaffold0026 (2 HSPs)
scaffold0026 (51-240)||(111557-111746)
scaffold0026 (56-234)||(11850-12029)
[»] chr8 (14 HSPs)
chr8 (41-240)||(44477494-44477693)
chr8 (41-240)||(44492652-44492851)
chr8 (59-240)||(8727735-8727917)
chr8 (56-234)||(23866491-23866670)
chr8 (58-166)||(17054537-17054644)
chr8 (148-240)||(27940946-27941038)
chr8 (9-111)||(24320623-24320725)
chr8 (57-121)||(23482053-23482117)
chr8 (57-113)||(18614271-18614327)
chr8 (47-112)||(25111976-25112041)
chr8 (57-113)||(39364919-39364975)
chr8 (57-111)||(29643386-29643440)
chr8 (55-112)||(14056562-14056619)
chr8 (57-113)||(21931696-21931752)
[»] chr2 (18 HSPs)
chr2 (57-240)||(6483589-6483772)
chr2 (57-240)||(6487056-6487239)
chr2 (57-237)||(19661454-19661634)
chr2 (56-237)||(26583702-26583882)
chr2 (57-240)||(23101463-23101647)
chr2 (59-240)||(23089057-23089239)
chr2 (59-240)||(23878879-23879060)
chr2 (9-111)||(25180882-25180984)
chr2 (9-111)||(26885183-26885284)
chr2 (9-111)||(27207672-27207774)
chr2 (51-166)||(5706018-5706133)
chr2 (16-111)||(10577-10672)
chr2 (57-121)||(23265133-23265197)
chr2 (57-121)||(23280201-23280265)
chr2 (57-118)||(21908353-21908414)
chr2 (9-109)||(23168252-23168351)
chr2 (9-109)||(23579509-23579608)
chr2 (57-113)||(24661576-24661632)
[»] chr7 (32 HSPs)
chr7 (56-237)||(14422858-14423040)
chr7 (57-240)||(16009448-16009631)
chr7 (61-234)||(10895795-10895969)
chr7 (57-234)||(15168052-15168230)
chr7 (56-234)||(18873237-18873416)
chr7 (56-234)||(12709843-12710022)
chr7 (56-234)||(13122914-13123093)
chr7 (56-236)||(13743584-13743764)
chr7 (59-237)||(16677167-16677348)
chr7 (59-237)||(17651403-17651584)
chr7 (56-233)||(12590643-12590818)
chr7 (56-166)||(13007378-13007487)
chr7 (9-111)||(2971254-2971356)
chr7 (9-112)||(14567203-14567306)
chr7 (9-111)||(14319582-14319684)
chr7 (9-111)||(20906414-20906516)
chr7 (57-112)||(11382871-11382926)
chr7 (57-112)||(11389348-11389403)
chr7 (9-111)||(29181061-29181164)
chr7 (14-111)||(14230781-14230878)
chr7 (55-112)||(20311050-20311107)
chr7 (55-112)||(21230958-21231015)
chr7 (9-108)||(16091078-16091178)
chr7 (57-120)||(13679485-13679548)
chr7 (41-109)||(31155396-31155464)
chr7 (57-111)||(11311059-11311113)
chr7 (57-113)||(46625961-46626017)
chr7 (56-92)||(831633-831669)
chr7 (56-92)||(1196813-1196849)
chr7 (51-111)||(2465361-2465421)
chr7 (51-111)||(3857360-3857419)
chr7 (56-92)||(34958578-34958614)
[»] chr6 (35 HSPs)
chr6 (51-240)||(10986175-10986365)
chr6 (57-240)||(23839069-23839253)
chr6 (57-237)||(4477731-4477912)
chr6 (56-234)||(29614146-29614325)
chr6 (57-234)||(23057815-23057993)
chr6 (56-237)||(18800311-18800493)
chr6 (56-190)||(930095-930229)
chr6 (51-139)||(34646655-34646743)
chr6 (56-166)||(12168309-12168418)
chr6 (56-166)||(19287218-19287327)
chr6 (56-166)||(19785869-19785978)
chr6 (56-166)||(19878402-19878511)
chr6 (59-240)||(21565214-21565396)
chr6 (51-139)||(34639981-34640069)
chr6 (56-166)||(19884178-19884287)
chr6 (55-162)||(25469703-25469808)
chr6 (55-112)||(24512842-24512899)
chr6 (9-109)||(20007900-20007999)
chr6 (9-121)||(31252413-31252526)
chr6 (57-109)||(9187498-9187550)
chr6 (57-113)||(25348486-25348542)
chr6 (17-84)||(28288472-28288537)
chr6 (59-113)||(25598643-25598697)
chr6 (17-145)||(11288631-11288758)
chr6 (41-109)||(15458492-15458560)
chr6 (41-109)||(15465087-15465155)
chr6 (57-113)||(25397172-25397228)
chr6 (57-113)||(19471335-19471391)
chr6 (59-113)||(2286769-2286823)
chr6 (51-109)||(9099066-9099124)
chr6 (57-91)||(18659450-18659484)
chr6 (29-111)||(21364456-21364537)
chr6 (29-111)||(23968438-23968519)
chr6 (57-91)||(24441673-24441707)
chr6 (55-91)||(29847278-29847314)
[»] chr1 (17 HSPs)
chr1 (57-240)||(20437024-20437208)
chr1 (56-166)||(41111981-41112090)
chr1 (9-111)||(20851085-20851187)
chr1 (9-111)||(20857712-20857814)
chr1 (9-111)||(21706276-21706378)
chr1 (9-111)||(21710818-21710920)
chr1 (57-121)||(32651563-32651627)
chr1 (57-121)||(18712790-18712854)
chr1 (57-112)||(19663517-19663572)
chr1 (57-113)||(20805320-20805376)
chr1 (57-112)||(11158093-11158148)
chr1 (59-113)||(10811785-10811839)
chr1 (15-109)||(20044910-20045004)
chr1 (57-87)||(24476350-24476380)
chr1 (57-87)||(25091418-25091448)
chr1 (58-91)||(18271338-18271371)
chr1 (58-91)||(18275992-18276025)
[»] scaffold0029 (3 HSPs)
scaffold0029 (56-234)||(111758-111938)
scaffold0029 (51-111)||(91197-91257)
scaffold0029 (51-111)||(96923-96983)
[»] scaffold1773 (1 HSPs)
scaffold1773 (56-234)||(1055-1233)
[»] scaffold0006 (1 HSPs)
scaffold0006 (56-234)||(50056-50234)
[»] scaffold0025 (1 HSPs)
scaffold0025 (59-236)||(14398-14577)
[»] scaffold0247 (1 HSPs)
scaffold0247 (56-240)||(11212-11397)
[»] scaffold0924 (1 HSPs)
scaffold0924 (56-234)||(750-930)
[»] scaffold0058 (1 HSPs)
scaffold0058 (56-236)||(167-346)
[»] scaffold0117 (2 HSPs)
scaffold0117 (56-233)||(8574-8751)
scaffold0117 (56-233)||(1897-2074)
[»] chr4 (16 HSPs)
chr4 (56-233)||(8045832-8046009)
chr4 (56-234)||(11847984-11848169)
chr4 (51-166)||(53483650-53483765)
chr4 (55-112)||(15408139-15408196)
chr4 (29-111)||(16146803-16146885)
chr4 (57-113)||(8834895-8834951)
chr4 (57-113)||(13888641-13888697)
chr4 (59-111)||(14486661-14486713)
chr4 (57-113)||(15245215-15245271)
chr4 (51-111)||(27906266-27906326)
chr4 (62-113)||(22724691-22724742)
chr4 (57-113)||(15308120-15308176)
chr4 (55-113)||(14912081-14912139)
chr4 (57-87)||(15069781-15069811)
chr4 (57-87)||(15076381-15076411)
chr4 (56-92)||(15747556-15747592)
[»] scaffold0154 (1 HSPs)
scaffold0154 (56-237)||(30730-30913)
[»] scaffold0090 (1 HSPs)
scaffold0090 (56-236)||(18043-18225)
[»] scaffold0476 (1 HSPs)
scaffold0476 (59-240)||(3295-3478)
[»] scaffold0077 (1 HSPs)
scaffold0077 (59-240)||(3624-3806)
[»] scaffold0127 (1 HSPs)
scaffold0127 (9-111)||(10239-10341)
[»] scaffold0796 (2 HSPs)
scaffold0796 (15-166)||(1691-1841)
scaffold0796 (15-166)||(5714-5864)
[»] scaffold0001 (1 HSPs)
scaffold0001 (9-111)||(492981-493082)
[»] scaffold0456 (2 HSPs)
scaffold0456 (56-139)||(904-987)
scaffold0456 (56-139)||(8049-8132)
[»] scaffold1318 (1 HSPs)
scaffold1318 (9-111)||(1865-1967)
[»] scaffold0129 (1 HSPs)
scaffold0129 (55-166)||(45273-45384)
[»] scaffold0023 (2 HSPs)
scaffold0023 (17-111)||(135438-135532)
scaffold0023 (55-91)||(163352-163388)
[»] scaffold0720 (1 HSPs)
scaffold0720 (14-111)||(3360-3457)
[»] scaffold0222 (1 HSPs)
scaffold0222 (57-121)||(16811-16875)
[»] scaffold0004 (2 HSPs)
scaffold0004 (57-121)||(116887-116951)
scaffold0004 (58-91)||(60441-60474)
[»] scaffold0053 (1 HSPs)
scaffold0053 (9-111)||(79442-79545)
[»] scaffold0310 (1 HSPs)
scaffold0310 (55-112)||(17643-17700)
[»] scaffold0107 (1 HSPs)
scaffold0107 (55-112)||(40530-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (55-112)||(135473-135530)
[»] scaffold0461 (1 HSPs)
scaffold0461 (57-121)||(8-72)
[»] scaffold0348 (1 HSPs)
scaffold0348 (43-111)||(9336-9404)
[»] scaffold0146 (1 HSPs)
scaffold0146 (57-121)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (57-121)||(101928-101992)
[»] scaffold0235 (1 HSPs)
scaffold0235 (58-110)||(22594-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (57-112)||(34276-34331)
scaffold0124 (55-113)||(35437-35495)
[»] scaffold0072 (1 HSPs)
scaffold0072 (9-111)||(49922-50025)
[»] scaffold0131 (1 HSPs)
scaffold0131 (9-111)||(997-1098)
[»] scaffold0609 (1 HSPs)
scaffold0609 (41-121)||(5842-5922)
[»] scaffold0138 (1 HSPs)
scaffold0138 (57-113)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (57-120)||(1378-1441)
[»] scaffold0139 (1 HSPs)
scaffold0139 (57-112)||(14997-15052)
[»] scaffold0261 (1 HSPs)
scaffold0261 (51-111)||(23564-23624)
[»] scaffold0249 (1 HSPs)
scaffold0249 (41-109)||(13879-13947)
[»] scaffold0815 (1 HSPs)
scaffold0815 (57-108)||(1453-1504)
[»] scaffold0096 (1 HSPs)
scaffold0096 (58-113)||(39508-39563)
[»] scaffold0384 (1 HSPs)
scaffold0384 (15-109)||(16023-16117)
[»] scaffold0335 (1 HSPs)
scaffold0335 (57-113)||(2628-2684)
[»] scaffold0453 (1 HSPs)
scaffold0453 (52-111)||(10546-10605)
[»] scaffold2054 (1 HSPs)
scaffold2054 (56-145)||(680-770)
[»] scaffold0481 (1 HSPs)
scaffold0481 (58-103)||(676-721)
[»] scaffold0962 (1 HSPs)
scaffold0962 (55-91)||(614-650)
[»] scaffold0600 (1 HSPs)
scaffold0600 (57-113)||(732-788)
[»] scaffold0422 (1 HSPs)
scaffold0422 (55-107)||(3962-4014)
[»] scaffold0181 (1 HSPs)
scaffold0181 (55-91)||(25519-25555)
[»] scaffold0180 (1 HSPs)
scaffold0180 (57-106)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (59-111)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (57-113)||(121902-121958)
scaffold0031 (57-113)||(132778-132834)
[»] scaffold0028 (1 HSPs)
scaffold0028 (57-109)||(69749-69801)


Alignment Details
Target: scaffold0553 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 9 - 240
Target Start/End: Original strand, 10148 - 10380
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10148 gagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaa 10247  T
Q  109 attgacctaattgcata-attttggaaaataaattgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaat 207  Q
    |||||||||||||||||  |||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  10248 attgacctaattgcatagtttttggaagataaattgtgggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaat 10347  T
Q  208 gtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||||||||||||||||||||||||||    
T  10348 gtaatgtttagaatgaaaacttaatctatactg 10380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 9 - 240
Target Start/End: Original strand, 1478 - 1710
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1478 gagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaa 1577  T
Q  109 attgacctaattgcata-attttggaaaataaattgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaat 207  Q
    |||||||||||||||||  |||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  1578 attgacctaattgcatagtttttggaagataaattgtgggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaat 1677  T
Q  208 gtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||||||||||||||||||||||||||    
T  1678 gtaatgtttagaatgaaaacttaatctatactg 1710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 9 - 240
Target Start/End: Original strand, 23370458 - 23370690
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23370458 gagaagaacttaggaacggatttgctgtgctttttgtctatacaattctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaa 23370557  T
Q  109 attgacctaattgcata-attttggaaaataaattgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaat 207  Q
    |||||||||||||||||  |||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||    
T  23370558 attgacctaattgcatagtttttggaagataaattgtgggttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaat 23370657  T
Q  208 gtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||||||||||||||||||||||||||    
T  23370658 gtaatgtttagaatgaaaacttaatctatactg 23370690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 9534382 - 9534199
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  157 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9534282 gatgatgattctgagtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 9534199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 57 - 234
Target Start/End: Original strand, 14762758 - 14762936
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  157 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 14762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 20247791 - 20247967
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttga 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  159 tgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||| || ||||  ||||||| |||||||||||||| | ||||||| ||||||| ||||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatct 20247967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 24193009 - 24192830
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  158 atgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 236  Q
    ||||||||| || ||||  ||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctat 24192830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 234
Target Start/End: Original strand, 38310802 - 38310978
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttga 158  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  159 tgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 38310978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 48 - 166
Target Start/End: Original strand, 24933820 - 24933937
Alignment:
Q  48 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgaggg 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||       
T  24933820 ctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaa 24933918  T
Q  148 ttagggtttgatgatgatt 166  Q
    |||||||||||||||||||    
T  24933919 ttagggtttgatgatgatt 24933937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 59 - 238
Target Start/End: Original strand, 55499104 - 55499285
Alignment:
Q  59 aggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||| |||  |||   |  |||||||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggttt 55499203  T
Q  157 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatac 238  Q
    |||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||    
T  55499204 gatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatac 55499285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 16801467 - 16801648
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat-aaattgagggttagggt 154  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||| ||  ||| ||| || ||||||| ||||||||     
T  16801467 ctaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggttaggg- 16801564  T
Q  155 ttgatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    |||||||||||| ||||| | |||| ||| |||||||||||| | |  |||||||| ||||||||||||||  ||||| |||||    
T  16801565 ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaattcttaacctata 16801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 17131834 - 17131732
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  17131834 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 17131735  T
Q  109 att 111  Q
    |||    
T  17131734 att 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 41455097 - 41455178
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  41455097 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 13302195 - 13302295
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    ||||||||| ||||||| ||||||||||| ||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||| | ||||||||||||    
T  13302195 gagatgaacctaggaactgatttgctgtgttttttttct--acaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaa 13302292  T
Q  109 att 111  Q
    |||    
T  13302293 att 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 14865948 - 14865846
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | ||||||||||||    
T  14865948 gagaagaacttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaa 14865849  T
Q  109 att 111  Q
    |||    
T  14865848 att 14865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 13312851 - 13312951
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    ||||||||| ||||||| ||||||||||| ||||| |||  ||||||||||||||||||||||| ||||| |||||||||||||| | |||||| |||||    
T  13312851 gagatgaacctaggaactgatttgctgtgttttttttct--acaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaa 13312948  T
Q  109 att 111  Q
    |||    
T  13312949 att 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 12033398 - 12033499
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| |||||| ||||||||| |||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  12033398 gagaagaacttaggaactgatttgatgtgctttt-gtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 12033496  T
Q  109 att 111  Q
    |||    
T  12033497 att 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 13323742 - 13323842
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||| ||||||| |||||||||   ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||| | ||||||||||||    
T  13323742 gagaagaacctaggaactgatttgctga--tttttttttctacaattctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaa 13323839  T
Q  109 att 111  Q
    |||    
T  13323840 att 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 118  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 10389428 - 10389553
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 140  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||     
T  10389428 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataat 10389527  T
Q  141 ttgagggttagggtttgatgatgatt 166  Q
     |||   |||||||||||||||||||    
T  10389528 atgaaaattagggtttgatgatgatt 10389553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 10414517 - 10414642
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 140  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||     
T  10414517 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataat 10414616  T
Q  141 ttgagggttagggtttgatgatgatt 166  Q
     |||   |||||||||||||||||||    
T  10414617 atgaaaattagggtttgatgatgatt 10414642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 10421187 - 10421312
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 140  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | ||||||| ||| ||||  | |||||     
T  10421187 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataat 10421286  T
Q  141 ttgagggttagggtttgatgatgatt 166  Q
     |||   |||||||||||||||||||    
T  10421287 atgaaaattagggtttgatgatgatt 10421312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 51301649 - 51301589
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301649 caattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 23392818 - 23392854
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23392818 tctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 16801081 - 16801027
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801081 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 19235063 - 19235121
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  19235063 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 19235121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 2247648 - 2247685
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataa 92  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  2247648 tctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 52212430 - 52212466
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  52212430 tctaaggtaagggtgaggctaactctcaataatcata 52212466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 56 - 240
Target Start/End: Original strand, 38144536 - 38144720
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144536 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 38144635  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144636 tgatgatgattctgaggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 38144720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 57 - 240
Target Start/End: Original strand, 28370055 - 28370238
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  157 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  28370155 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 28370238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 19512441 - 19512257
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19512341 tgatgatgattttgaggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactg 19512257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 22751197 - 22751018
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  22751197 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 22751098  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    ||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  22751097 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 22751018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 23528686 - 23528577
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  23528686 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 23528588  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  23528587 tgatgatgatt 23528577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 19237002 - 19236900
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  19237002 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 19236903  T
Q  109 att 111  Q
    |||    
T  19236902 att 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22461258 - 22461158
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| ||||||| |||| |||||||||||| |||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  22461258 gagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 22461159  T
Q  109 a 109  Q
    |    
T  22461158 a 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 22467882 - 22467782
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| ||||||| |||| |||||||||||| |||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  22467882 gagaagaacttaagaactgatttgctgtgccttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 22467783  T
Q  109 a 109  Q
    |    
T  22467782 a 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 22438746 - 22438803
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438746 tctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 20781804 - 20781744
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||    
T  20781804 caattctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaaatt 20781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 20773029 - 20772969
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||||    
T  20773029 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaatt 20772969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 34830144 - 34830086
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 110  Q
    ||||||||||||||||||| || ||||| ||||||||  |||| ||||||||||||||||    
T  34830144 caattctaaggtaagggtgggattatctttcaataat-ttaatgtataatttctgaaaat 34830086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 85
Target Start/End: Original strand, 17021912 - 17021942
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaata 85  Q
    |||||||||||||||||||||||||||||||    
T  17021912 tctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 28909243 - 28909344
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||| ||||||  |||||||||||||||| |||  | ||||||||||||||||||| ||  |||| |||||| | ||| | ||| ||||||||||    
T  28909243 gagaagaacctaggaattgatttgctgtgctttt-gtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaa 28909341  T
Q  109 att 111  Q
    |||    
T  28909342 att 28909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 28945638 - 28945739
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||| ||||||  |||||||||||||||| |||  | ||||||||||||||||||| ||  |||| |||||| | ||| | ||| ||||||||||    
T  28945638 gagaagaacctaggaattgatttgctgtgctttt-gtcgttgcaattctaaggtaagggtgggatcatctttcaatagtgatattatatgatttctgaaa 28945736  T
Q  109 att 111  Q
    |||    
T  28945737 att 28945739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 21663141 - 21663177
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  21663141 tctaaggtaagggtgaggctaactctcaataatcata 21663177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 22356902 - 22356938
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22356902 tctaaggtaagggtgaggctaactctcaataatcata 22356938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 51 - 240
Target Start/End: Complemental strand, 111746 - 111557
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggtta 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  111746 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggtta 111647  T
Q  151 gggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  111646 gggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 111557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 11850 - 12029
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  11850 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttagggtt 11949  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    ||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| |||| || ||||||||||||||||||    
T  11950 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatct 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 44477693 - 44477494
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 140  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44477693 tttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaa 44477594  T
Q  141 ttgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44477593 ttgagggttagggtttgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44477494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 44492851 - 44492652
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaa 140  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44492851 tttgtcttcacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaa 44492752  T
Q  141 ttgagggttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  44492751 ttgagggttagggtttgatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 44492652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 8727735 - 8727917
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  158 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  8727835 acgatgattctgaggggtatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 8727917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 23866670 - 23866491
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  23866670 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 23866572  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  23866571 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 23866491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 166
Target Start/End: Complemental strand, 17054644 - 17054537
Alignment:
Q  58 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||||    
T  17054644 aaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttg 17054546  T
Q  158 atgatgatt 166  Q
    |||||||||    
T  17054545 atgatgatt 17054537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 27940946 - 27941038
Alignment:
Q  148 ttagggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||    
T  27940946 ttagggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactg 27941038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 24320623 - 24320725
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  24320623 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 24320722  T
Q  109 att 111  Q
    |||    
T  24320723 att 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 18614327 - 18614271
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 25112041 - 25111976
Alignment:
Q  47 tctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112041 tctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 14056562 - 14056619
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056562 tctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 164; Significance: 1e-87; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 6483772 - 6483589
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  157 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6483672 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6483589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 6487239 - 6487056
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  157 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  6487139 gatgatgattttgaggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactg 6487056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 57 - 237
Target Start/End: Original strand, 19661454 - 19661634
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  157 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19661554 gatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 19661634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 26583882 - 26583702
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |    
T  26583882 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggct 26583784  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    ||||||||||| ||||||| | ||||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  26583783 tgatgatgattctgaggggaaagggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 26583702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 240
Target Start/End: Original strand, 23101463 - 23101647
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||  |||  |||   |  ||||||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtt 23101562  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23101563 tgatgatgattctgaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23101647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 23089057 - 23089239
Alignment:
Q  59 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  ||||||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 23089156  T
Q  158 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  23089157 atgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 23089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 59 - 240
Target Start/End: Complemental strand, 23879060 - 23878879
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttga 158  Q
    |||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||| |||  |||   | ||||||||||||||||| |||     
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttaggg-ttgt 23878962  T
Q  159 tgatgattatgaggggtat-gggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||| ||||||| || ||||| |||||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  23878961 tgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactg 23878879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 25180882 - 25180984
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  25180882 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 25180981  T
Q  109 att 111  Q
    |||    
T  25180982 att 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 26885284 - 26885183
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| || ||||| ||||||||| |||| ||||||||||||||    
T  26885284 gagaagaacttaggaacggatttgatgtgctttttgtctctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaa 26885186  T
Q  109 att 111  Q
    |||    
T  26885185 att 26885183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 27207672 - 27207774
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || ||||| ||||| ||  |||| ||||||||||||||    
T  27207672 gagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaa 27207771  T
Q  109 att 111  Q
    |||    
T  27207772 att 27207774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 5706018 - 5706133
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggtt 149  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   ||    
T  5706018 caattctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaatt 5706116  T
Q  150 agggtttgatgatgatt 166  Q
    |||||||||||||||||    
T  5706117 agggtttgatgatgatt 5706133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 10672 - 10577
Alignment:
Q  16 acttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||| ||||||||||||||||||||| |  |||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10672 acttaggaactgatttgctgtgctttttgtctttgaaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 118  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 23168252 - 23168351
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| ||||||||| |||| |||||||||||||| || ||| ||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||||||    
T  23168252 gagaagaacttagggacggttttgctgtgctttt-gtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaa 23168350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 23579509 - 23579608
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| ||||||||| |||| |||||||||||||| || ||| ||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||||||    
T  23579509 gagaagaacttagggacggttttgctgtgctttt-gtttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaa 23579607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 3e-82; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 14423040 - 14422858
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggt 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  14423040 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggt 14422941  T
Q  155 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    |||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14422940 ttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 14422858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 16009631 - 16009448
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  157 gatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16009531 gatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactg 16009448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 10895795 - 10895969
Alignment:
Q  61 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtttgat 159  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  160 gatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  10895895 gatgattctgaggggaatgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 10895969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 57 - 234
Target Start/End: Complemental strand, 15168230 - 15168052
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  157 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 15168052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 18873416 - 18873237
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  18873416 ctaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 18873317  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    ||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  18873316 tgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 18873237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 12709843 - 12710022
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  12709843 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 12709941  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  12709942 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 12710022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 13122914 - 13123093
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  13122914 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 13123012  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattcta-ttgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||||||| || |  ||||||| ||||||||||||||||| ||||||| ||||||| |||||  |||||||||||    
T  13123013 tgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct 13123093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 56 - 236
Target Start/End: Complemental strand, 13743764 - 13743584
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  13743764 ctaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 13743666  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 236  Q
    |||||||||||||| || |  ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  13743665 tgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctat 13743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 16677348 - 16677167
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaat-aaattgagggttagggttt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| || ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  157 gatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    |||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 16677167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 17651584 - 17651403
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaat-aaattgagggttagggttt 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| || ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  157 gatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    |||||||||| ||||| | |||| ||| |||||||||||| | | |||||| || ||||| ||||||||  | |||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctata 17651403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 12590643 - 12590818
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  12590643 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttagggtt 12590741  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 233  Q
    ||||||||||| |||  || ||| |||  ||| |||||| || | ||| ||| ||||||| ||||||||| |||||||    
T  12590742 tgatgatgattctga-tggaatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatc 12590818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 13007487 - 13007378
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  13007487 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 13007389  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  13007388 tgatgatgatt 13007378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 2971356 - 2971254
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  2971356 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaa 2971257  T
Q  109 att 111  Q
    |||    
T  2971256 att 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 14567306 - 14567203
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  ||||| || ||||| |||  |||||||||    
T  14567306 gagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaa 14567207  T
Q  109 attg 112  Q
    ||||    
T  14567206 attg 14567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 14319582 - 14319684
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || ||||| ||||| ||  |||| ||||||||||||||    
T  14319582 gagaagaacttaggaacggatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgattttaatgtataatttctgaaa 14319681  T
Q  109 att 111  Q
    |||    
T  14319682 att 14319684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 20906414 - 20906516
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||| ||| ||||||  | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  20906414 gagaagaacttaggaacggatttgctgagctatttgtccttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 20906513  T
Q  109 att 111  Q
    |||    
T  20906514 att 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 29181061 - 29181164
Alignment:
Q  9 gagatgaacttaggaacggattt-gctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 107  Q
    |||| |||||||||||| ||||| |||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||    
T  29181061 gagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaa 29181160  T
Q  108 aatt 111  Q
    ||||    
T  29181161 aatt 29181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 14230878 - 14230781
Alignment:
Q  14 gaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||||| || ||||| ||||| |   |||| |||||||||||||||||    
T  14230878 gaacttaggaacggatttgtcgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatgaatttaatgtataatttctgaaaatt 14230781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 20311050 - 20311107
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311050 tctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 21230958 - 21231015
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230958 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 16091178 - 16091078
Alignment:
Q  9 gagatgaacttaggaacggattt-gctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 107  Q
    |||| |||||||||||| ||||| |||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||    
T  16091178 gagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaa 16091079  T
Q  108 a 108  Q
    |    
T  16091078 a 16091078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 13679548 - 13679485
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 120  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 31155464 - 31155396
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  31155464 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    |||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 831633 - 831669
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataa 92  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  831633 ctaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 1196813 - 1196849
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataa 92  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  1196813 ctaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 2465421 - 2465361
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||| ||  |||  |||||||| ||||| ||| |||||||||||||    
T  2465421 caattctaaggtaagggtgggatcatccttcaataatgataatatatgatttctgaaaatt 2465361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 3857360 - 3857419
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  3857360 caattctaaggtaagggtgggatcatct-tcaataatgataatatatgatttctgaaaatt 3857419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 34958614 - 34958578
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataa 92  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  34958614 ctaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 7e-80; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 51 - 240
Target Start/End: Original strand, 10986175 - 10986365
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggtt 149  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||||||    
T  10986175 caattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggtt 10986274  T
Q  150 agggtttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  10986275 agggtttgatgatgattctgaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 10986365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 57 - 240
Target Start/End: Complemental strand, 23839253 - 23839069
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataat-tttggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||||| | ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23839153 tgatgatgattctaaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactg 23839069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 57 - 237
Target Start/End: Complemental strand, 4477912 - 4477731
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  4477812 tgatgatgattctgaggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctata 4477731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 29614146 - 29614325
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttgg-aaaataaattgagggttagggt 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  29614146 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggttagggt 29614245  T
Q  155 ttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    ||||||||||||||| ||||  ||||||| |||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  29614246 ttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatct 29614325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 57 - 234
Target Start/End: Complemental strand, 23057993 - 23057815
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggttt 156  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  157 gatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 23057815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 18800493 - 18800311
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata-aattgagggttagggt 154  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  18800493 ctaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggt 18800394  T
Q  155 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    |||||||||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| |||||||||||    
T  18800393 ttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctata 18800311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 56 - 190
Target Start/End: Original strand, 930095 - 930229
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  930095 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttagggtt 930194  T
Q  156 tgatgatgattatgaggggtatgggtattgatcat 190  Q
    |||||||| || ||| ||| ||||||| |||||||    
T  930195 tgatgatgtttctgaagggaatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 34646655 - 34646743
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 139  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34646655 caattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 12168418 - 12168309
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  12168418 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 12168320  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  12168319 tgatgatgatt 12168309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 19287327 - 19287218
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  19287327 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19287229  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  19287228 tgatgatgatt 19287218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 19785869 - 19785978
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||| |||  |||||||||    
T  19785869 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttagggtt 19785967  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  19785968 tgatgatgatt 19785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 19878511 - 19878402
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  19878511 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19878413  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  19878412 tgatgatgatt 19878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 21565214 - 21565396
Alignment:
Q  59 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  ||||||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 21565313  T
Q  158 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||| | ||||| ||||||| |||||||||||||| | ||||||||| | |||  |||||||| ||||||||||||||    
T  21565314 atgatgattctaaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactg 21565396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 139
Target Start/End: Original strand, 34639981 - 34640069
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 139  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  34639981 caattctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 19884287 - 19884178
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||  |||  |||||||||    
T  19884287 ctaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtt 19884189  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  19884188 tgatgatgatt 19884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 25469703 - 25469808
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||  |||||||||||||  |||   |||||||    
T  25469703 tctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggt 25469800  T
Q  155 ttgatgat 162  Q
    ||||||||    
T  25469801 ttgatgat 25469808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 24512842 - 24512899
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512842 tctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 20007900 - 20007999
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| ||||||||||||  ||||||||||||||| |||| | ||||||||||||||||||| ||  |||| |||||| ||||||| |||||||| |||||    
T  20007900 gagaagaacttaggaactcatttgctgtgctttt-gtctttgcaattctaaggtaagggtgggatcatctttcaatagtcataatatataatttatgaaa 20007998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 31252526 - 31252413
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgcttt--ttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctga 106  Q
    |||| |||||||||||| |||| |||||| |||  |||||| | |||||||||||||||||||||| ||||| | ||| || ||||| ||||||||||||    
T  31252526 gagaagaacttaggaaccgatt-gctgtgttttctttgtctttgcaattctaaggtaagggtgagattatcttttaatgattataatatataatttctga 31252428  T
Q  107 aaattgacctaattg 121  Q
    ||||| | |||||||    
T  31252427 aaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 28288472 - 28288537
Alignment:
Q  17 cttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaat 84  Q
    ||||||||| |||| |||||| ||||||||| | ||||||||||||||||||||||||||||||||||    
T  28288472 cttaggaactgatt-gctgtg-tttttgtctttgcaattctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 11288631 - 11288758
Alignment:
Q  17 cttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacc 115  Q
    ||||||||| |||| |||||| |||||||||   ||||||||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| |||    
T  11288631 cttaggaactgatt-gctgtg-tttttgtcttggcaattctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacc 11288728  T
Q  116 taattgcataattttggaaaataaattgag 145  Q
    |||  | ||| || | ||||||||||||||    
T  11288729 taaaagaatagttcttgaaaataaattgag 11288758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 15458560 - 15458492
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15458560 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 15465155 - 15465087
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15465155 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 2286769 - 2286823
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286769 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 9099066 - 9099124
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  9099066 caattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 9099124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 91
Target Start/End: Complemental strand, 18659484 - 18659450
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||||| |||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 21364456 - 21364537
Alignment:
Q  29 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||| |||| | |||||| |||||||||||| || ||||  ||| |||| ||||| ||| |||||||||||||    
T  21364456 tttgctgtgctttt-gtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaatt 21364537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 23968438 - 23968519
Alignment:
Q  29 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||| |||| | |||||| |||||||||||| || ||||  ||| |||| ||||| ||| |||||||||||||    
T  23968438 tttgctgtgctttt-gtctttgcaattcaaaggtaagggtgggattatccttcagtaatgataatatatgatttctgaaaatt 23968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 91
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 29847278 - 29847314
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  29847278 tctaaggtaagggtgaggctaactctcaataatcata 29847314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 57 - 240
Target Start/End: Original strand, 20437024 - 20437208
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataatttt-ggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  20437124 tgatgatgattctgaggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactg 20437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 41112090 - 41111981
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||||  |||  |||||||||    
T  41112090 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttagggtt 41111992  T
Q  156 tgatgatgatt 166  Q
    |||||||||||    
T  41111991 tgatgatgatt 41111981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 20851085 - 20851187
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  20851085 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 20851184  T
Q  109 att 111  Q
    |||    
T  20851185 att 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 20857712 - 20857814
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  20857712 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 20857811  T
Q  109 att 111  Q
    |||    
T  20857812 att 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 21706378 - 21706276
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  21706378 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 21706279  T
Q  109 att 111  Q
    |||    
T  21706278 att 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 21710920 - 21710818
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  21710920 gagaagaacttaggaactgatttgctgtgctttttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 21710821  T
Q  109 att 111  Q
    |||    
T  21710820 att 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 20044910 - 20045004
Alignment:
Q  15 aacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||||| | ||||||||||| |  || |  |||||||||||||||||||||| || ||||  ||||| ||| |||| ||||| |||||||||    
T  20044910 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatccttcaatgatcttaatatataaattctgaaaa 20045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  57 taaggtaagggtgagactatctctcaataat 87  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  57 taaggtaagggtgagactatctctcaataat 87  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  58 aaggtaagggtgagactatctctcaataatcata 91  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  58 aaggtaagggtgagactatctctcaataatcata 91  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 129; Significance: 9e-67; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 111938 - 111758
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgagggttagggt 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  111938 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggttagggt 111839  T
Q  155 ttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||||| || ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  111838 ttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 111758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 91197 - 91257
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  91197 caattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 91257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 96923 - 96983
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||| ||  |||| |||||||| ||||| ||| |||||||||||||    
T  96923 caattctaaggtaagggtgggatcatctttcaataatgataatatatgatttctgaaaatt 96983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 1233 - 1055
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  1233 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 1135  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||| ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  1134 tgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 1055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 50234 - 50056
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  50234 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 50136  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||| ||||||| ||||  ||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  50135 tgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct 50056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 14398 - 14577
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  158 atgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 236  Q
    ||||||||| || ||||  ||||||| |||||||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctat 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 56 - 240
Target Start/End: Complemental strand, 11397 - 11212
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaata-aattgagggttagggt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  11397 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggttagggt 11298  T
Q  155 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    |||||||||||| ||  ||| ||| ||| |||||||||||||||| ||||||||| ||||| | ||||||| ||||||| ||||||    
T  11297 ttgatgatgattctggagggaatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactg 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 234
Target Start/End: Original strand, 750 - 930
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  750 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggttagggt 849  T
Q  155 ttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    ||||||| ||||||| ||||  ||||||| |||||||| |||| || ||||||| ||||||| || || ||||||||||||    
T  850 ttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 56 - 236
Target Start/End: Complemental strand, 346 - 167
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  346 ctaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttagggtt 248  T
Q  156 tgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctat 236  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| | ||||| | |  |||| ||| |||| |||||||||||    
T  247 tgatgatgattctgaggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctat 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 8574 - 8751
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcataattttggaaaataaattgagggttagggt 154  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||    
T  8574 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 8673  T
Q  155 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 233  Q
    ||||||||||||||||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  8674 ttgatgatgattatga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatc 8751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 1897 - 2074
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgagggttagggt 154  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  1897 ctaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggttagggt 1996  T
Q  155 ttgatgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 233  Q
    |||||||||||| |||  || ||||||| |||| ||||||||||| ||||||| ||||||| | |||||||||||||||    
T  1997 ttgatgatgattttga-tggaatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatc 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 8045832 - 8046009
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtt 155  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8045832 ctaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataaattgagggttagggtt 8045930  T
Q  156 tgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatc 233  Q
    ||| ||  ||| || ||||  |||||||  ||| ||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8045931 tgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatc 8046009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 234
Target Start/End: Complemental strand, 11848169 - 11847984
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttg------gaaaataaattgagggtt 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||       ||||| |||||||||||    
T  11848169 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgagggtt 11848070  T
Q  150 agggtttgatgatgattatg-aggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatct 234  Q
    |||||||||||| |||| || || || ||||||| ||||||||||||| || || |||| ||||||| ||||||||||||||||||    
T  11848069 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatct 11847984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 53483765 - 53483650
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggtt 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   ||    
T  53483765 caattctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaatt 53483667  T
Q  150 agggtttgatgatgatt 166  Q
    |||||||||||||||||    
T  53483666 agggtttgatgatgatt 53483650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 15408196 - 15408139
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408196 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 16146803 - 16146885
Alignment:
Q  29 tttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  16146803 tttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 16146885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 27906326 - 27906266
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||| |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906326 caattctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  62 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    |||| |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 14912139 - 14912081
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14912139 tctaaggtaagggttagactaactctcaatgattgtaatatataacttctgaaaattga 14912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  57 taaggtaagggtgagactatctctcaataat 87  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  57 taaggtaagggtgagactatctctcaataat 87  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 15747556 - 15747592
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataa 92  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  15747556 ctaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 56 - 237
Target Start/End: Complemental strand, 30913 - 30730
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat-aaattgagggttagggt 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||| |||||||    
T  30913 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggattagggt 30814  T
Q  155 ttgatgatgattatgaggggtatgg-gtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctata 237  Q
    |||||||||||| ||||||| |||| |||  ||||||||||| | | |||||| || ||||  ||||||||  | |||||||||    
T  30813 ttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctata 30730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 236
Target Start/End: Complemental strand, 18225 - 18043
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcata-attttggaaaataaattgagggttagggt 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||| |||||||||||||||||||| |||    
T  18225 ctaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggttaaggt 18126  T
Q  155 ttgatgatgattatgaggggtatgggtattgatcatgttaattct-attgtaatgtaatgtttagaatgaaaacttaatctat 236  Q
    || ||||||||| | | ||| |  |||| || |||||||||||||  ||||||||| ||||  ||||||||||||||| ||||    
T  18125 ttaatgatgattctaacgggaaatggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctat 18043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 3295 - 3478
Alignment:
Q  59 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  ||||  |  ||||||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttg 3394  T
Q  158 atgatgattatgaggggtatgggtattg-atcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||| ||||||| ||||||| || |||||||||||| | ||||||||| ||||| ||||||||| ||||||||||||||    
T  3395 atgatgattctgaggggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactg 3478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 59 - 240
Target Start/End: Original strand, 3624 - 3806
Alignment:
Q  59 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttagggtttg 157  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||| |||  |||   |  ||||||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 3723  T
Q  158 atgatgattatgaggggtatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactg 240  Q
    ||||||||| ||||||| ||||||| |||||||||||||| | ||||||||| |||||  |||||||| ||||||||||||||    
T  3724 atgatgattctgagggggatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactg 3806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 10341 - 10239
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| | ||||||||||||    
T  10341 gagaagaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaa 10242  T
Q  109 att 111  Q
    |||    
T  10241 att 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 1691 - 1841
Alignment:
Q  15 aacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgac 114  Q
    ||||||||| | ||||||||||| |  || |  ||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  1691 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgac 1789  T
Q  115 ctaattgcataattttggaaaataaattgagggttagggtttgatgatgatt 166  Q
    ||||||| ||| |||||||||||||  |||  ||||||||||||||||||||    
T  1790 ctaattgaatagttttggaaaataatatgaaagttagggtttgatgatgatt 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 5714 - 5864
Alignment:
Q  15 aacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgac 114  Q
    ||||||||| | ||||||||||| |  || |  ||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  5714 aacttaggagctgatttgctgtgttaattcttcctacaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgac 5812  T
Q  115 ctaattgcataattttggaaaataaattgagggttagggtttgatgatgatt 166  Q
    ||||||| ||| |||||||||||||  |||  ||||||||||||||||||||    
T  5813 ctaattgaatagttttggaaaataatatgaaagttagggtttgatgatgatt 5864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 492981 - 493082
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||    
T  492981 gagaagaacttaggaacggatttgctgtgctttttgtctctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaa 493079  T
Q  109 att 111  Q
    |||    
T  493080 att 493082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 987 - 904
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  987 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 8132 - 8049
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataa 139  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||| ||||    
T  8132 ctaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 1865 - 1967
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| || ||||| |||||| ||||||| ||||||||||||||    
T  1865 gagaagaacttaggaacggatttgctgtgctttttgtctttgcaattgtaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaa 1964  T
Q  109 att 111  Q
    |||    
T  1965 att 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 45273 - 45384
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaat-tgagggttaggg 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||||  ||| |||   ||||||    
T  45273 tctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattaggg 45371  T
Q  154 tttgatgatgatt 166  Q
    |||||||||||||    
T  45372 tttgatgatgatt 45384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 135532 - 135438
Alignment:
Q  17 cttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||| ||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135532 cttaggaactgatttgctgtgctatttgtctttgcaattctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 163388 - 163352
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  163388 tctaaggtaagggtgaggctaactctcaataatcata 163352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 3360 - 3457
Alignment:
Q  14 gaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| | ||||| ||||| |   |||| |||||||||||||||||    
T  3360 gaacttaggaacggatttgccgtgctttttgtctttgcaattctaaggtaagggtgatattatctttcaatgaatttaatatataatttctgaaaatt 3457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  58 aaggtaagggtgagactatctctcaataatcata 91  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 79442 - 79545
Alignment:
Q  9 gagatgaacttaggaacggattt-gctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 107  Q
    |||| |||||||||||| ||||| |||||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||||||    
T  79442 gagaagaacttaggaactgattttgctgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaa 79541  T
Q  108 aatt 111  Q
    ||||    
T  79542 aatt 79545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 17700 - 17643
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17700 tctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 40530 - 40587
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 135530 - 135473
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135530 tctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 8 - 72
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 9404 - 9336
Alignment:
Q  43 tgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9404 tgtctctacaattctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 22594 - 22646
Alignment:
Q  58 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 110  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 35437 - 35495
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    |||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  35437 tctaaggtaagggtaagactaactctcaatgattgtaatgtataacttctgaaaattga 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 49922 - 50025
Alignment:
Q  9 gagatgaacttaggaacggattt-gctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 107  Q
    |||| |||||||||||| ||||| | |||||| ||||||| | ||||||||||||||||||| || ||||| |||||| ||||||| | |||||||| ||    
T  49922 gagaagaacttaggaactgattttgttgtgctatttgtctttgcaattctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctaaa 50021  T
Q  108 aatt 111  Q
    ||||    
T  50022 aatt 50025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 1098 - 997
Alignment:
Q  9 gagatgaacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    |||| |||| ||||||  |||||||||||||||| |||| | ||||||||||||||||||| ||  ||||||||||| | ||||| ||| ||||||||||    
T  1098 gagaagaacctaggaattgatttgctgtgctttt-gtctttgcaattctaaggtaagggtgggatcatctctcaatagtgataatatatgatttctgaaa 1000  T
Q  109 att 111  Q
    |||    
T  999 att 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 5842 - 5922
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 121  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5842 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 1441 - 1378
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 120  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 112  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 23564 - 23624
Alignment:
Q  51 caattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||||||||||| || ||||| | ||| |||||||| |||||||||||||||||    
T  23564 caattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 13879 - 13947
Alignment:
Q  41 tttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  13879 tttgtctttgcaattctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 1504 - 1453
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 108  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1504 taaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 39508 - 39563
Alignment:
Q  58 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    |||||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39508 aaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0384 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 16023 - 16117
Alignment:
Q  15 aacttaggaacggatttgctgtgctttttgtctctacaattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||||| | ||||||||||| |  || |  |||||||||||||||||||||| || ||||| |||||| | ||||| ||| |||||||||||    
T  16023 aacttaggagctgatttgctgtgttaattcttcctacaattctaaggtaagggtgggattatctttcaatagttataatatatgatttctgaaaa 16117  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0453 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 10546 - 10605
Alignment:
Q  52 aattctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    |||||||||||||| ||| || ||||| ||||| ||| |||| |||||||||||||||||    
T  10546 aattctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaatt 10605  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 770 - 680
Alignment:
Q  56 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcataattttggaaaataaattgag 145  Q
    |||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  | ||| || | ||||||||||||||    
T  770 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 676 - 721
Alignment:
Q  58 aaggtaagggtgagactatctctcaataatcataatctataatttc 103  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  676 aaggtaagggtgagactaactctcaatgatcttaatgtataatttc 721  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 614 - 650
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  614 tctaaggtaagggtgaggctaactctcaataatcata 650  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 788 - 732
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  788 taaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaattga 732  T

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Target: scaffold0422 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 4014 - 3962
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 107  Q
    ||||||||||||||||||||| |  |||||||||||| | ||||| |||||||    
T  4014 tctaaggtaagggtgagactaacattcaataatcatagtgtataaattctgaa 3962  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 25519 - 25555
Alignment:
Q  55 tctaaggtaagggtgagactatctctcaataatcata 91  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  25519 tctaaggtaagggtgaggctaactctcaataatcata 25555  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 11681 - 11630
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataa--tctataatttctga 106  Q
    ||||||||||||||||||| ||||||||||| ||||  | ||||||||||||    
T  11681 taaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 73337 - 73285
Alignment:
Q  59 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 111  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaatt 73285  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 121958 - 121902
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  121958 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 121902  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 132834 - 132778
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 113  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  132834 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 132778  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 69801 - 69749
Alignment:
Q  57 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 109  Q
    ||||||||||||||||||| || ||||| ||| |||| |||||||| ||||||    
T  69801 taaggtaagggtgagactaactttcaatgatcttaatatataatttatgaaaa 69749  T

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