View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18787_low_13 (Length: 314)

Name: NF18787_low_13
Description: NF18787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18787_low_13
NF18787_low_13
[»] chr7 (51 HSPs)
chr7 (16-266)||(3861074-3861324)
chr7 (250-308)||(3861466-3861524)
chr7 (15-157)||(46822148-46822291)
chr7 (15-139)||(6559010-6559135)
chr7 (15-138)||(21266523-21266647)
chr7 (18-157)||(31235585-31235725)
chr7 (26-157)||(35261441-35261573)
chr7 (17-155)||(46244068-46244213)
chr7 (15-157)||(433492-433635)
chr7 (27-157)||(32521730-32521861)
chr7 (35-133)||(48061570-48061668)
chr7 (17-157)||(2843042-2843183)
chr7 (17-157)||(26492500-26492641)
chr7 (26-155)||(43369577-43369706)
chr7 (26-157)||(7640576-7640708)
chr7 (26-137)||(23425194-23425306)
chr7 (18-133)||(34899452-34899567)
chr7 (18-133)||(40993288-40993403)
chr7 (67-157)||(20116767-20116857)
chr7 (28-157)||(22927671-22927801)
chr7 (17-138)||(35667052-35667174)
chr7 (17-157)||(35495976-35496117)
chr7 (34-135)||(46822586-46822686)
chr7 (78-157)||(17611588-17611667)
chr7 (34-133)||(19404602-19404701)
chr7 (34-101)||(38798928-38798995)
chr7 (35-101)||(13796806-13796872)
chr7 (35-101)||(28044633-28044699)
chr7 (35-133)||(37837303-37837401)
chr7 (35-133)||(39171435-39171533)
chr7 (35-133)||(42978758-42978856)
chr7 (35-101)||(45349676-45349742)
chr7 (17-89)||(1448699-1448772)
chr7 (17-157)||(32684803-32684944)
chr7 (34-133)||(12141152-12141252)
chr7 (26-101)||(17222857-17222933)
chr7 (26-157)||(20083482-20083614)
chr7 (18-101)||(19297001-19297084)
chr7 (34-125)||(29845001-29845092)
chr7 (66-125)||(46339239-46339298)
chr7 (17-100)||(46700165-46700248)
chr7 (35-133)||(8001391-8001489)
chr7 (35-109)||(9450006-9450080)
chr7 (28-157)||(23085667-23085797)
chr7 (26-139)||(23786719-23786833)
chr7 (59-109)||(24319960-24320010)
chr7 (73-135)||(24351177-24351239)
chr7 (35-101)||(28407795-28407861)
chr7 (59-129)||(48304109-48304179)
chr7 (17-157)||(45198834-45198975)
chr7 (35-100)||(47590459-47590524)
[»] chr5 (44 HSPs)
chr5 (26-157)||(20257497-20257629)
chr5 (17-157)||(3271203-3271344)
chr5 (34-133)||(13422077-13422176)
chr5 (18-138)||(13468736-13468856)
chr5 (15-157)||(4954127-4954270)
chr5 (50-157)||(43008116-43008223)
chr5 (28-157)||(7241932-7242062)
chr5 (28-157)||(7247107-7247237)
chr5 (35-133)||(11976780-11976878)
chr5 (26-139)||(30298990-30299104)
chr5 (17-157)||(19259613-19259754)
chr5 (17-157)||(27266660-27266801)
chr5 (26-149)||(15571053-15571177)
chr5 (28-139)||(43148875-43148987)
chr5 (34-157)||(10332366-10332491)
chr5 (35-133)||(14726306-14726404)
chr5 (17-123)||(28235722-28235831)
chr5 (35-133)||(38007503-38007600)
chr5 (35-157)||(38597942-38598067)
chr5 (17-157)||(21060084-21060225)
chr5 (17-157)||(27752062-27752203)
chr5 (38-126)||(8088064-8088152)
chr5 (17-133)||(9113570-9113686)
chr5 (26-157)||(34881863-34881995)
chr5 (26-157)||(35475139-35475271)
chr5 (17-139)||(7150154-7150277)
chr5 (35-101)||(8096375-8096441)
chr5 (17-157)||(10649781-10649920)
chr5 (35-133)||(24229629-24229727)
chr5 (35-133)||(25980302-25980400)
chr5 (17-157)||(781525-781666)
chr5 (66-139)||(16981479-16981552)
chr5 (17-157)||(18677267-18677407)
chr5 (26-137)||(11768145-11768257)
chr5 (34-101)||(2979183-2979250)
chr5 (78-157)||(8771982-8772061)
chr5 (18-89)||(11192507-11192578)
chr5 (18-133)||(13007357-13007472)
chr5 (18-101)||(26825558-26825641)
chr5 (18-133)||(34945521-34945636)
chr5 (17-139)||(7886758-7886880)
chr5 (35-101)||(31391630-31391696)
chr5 (31-150)||(7612866-7612986)
chr5 (67-139)||(30298397-30298469)
[»] chr2 (61 HSPs)
chr2 (17-157)||(8806005-8806146)
chr2 (17-139)||(2808292-2808414)
chr2 (26-156)||(9986144-9986275)
chr2 (15-157)||(34600351-34600494)
chr2 (66-157)||(40625858-40625949)
chr2 (18-109)||(17994596-17994691)
chr2 (38-157)||(32448436-32448557)
chr2 (34-157)||(37994439-37994564)
chr2 (34-136)||(41694776-41694877)
chr2 (17-157)||(18114007-18114147)
chr2 (28-132)||(29279417-29279521)
chr2 (29-125)||(32445367-32445463)
chr2 (17-139)||(27248970-27249093)
chr2 (18-125)||(38445305-38445412)
chr2 (17-157)||(4228261-4228403)
chr2 (37-133)||(9169103-9169200)
chr2 (35-133)||(11985079-11985177)
chr2 (26-139)||(17319468-17319582)
chr2 (35-125)||(33585589-33585679)
chr2 (35-109)||(36692030-36692104)
chr2 (27-139)||(84000-84113)
chr2 (17-157)||(8971429-8971570)
chr2 (18-126)||(7646617-7646725)
chr2 (37-137)||(18056304-18056403)
chr2 (18-157)||(25508887-25509029)
chr2 (69-157)||(36234190-36234278)
chr2 (18-133)||(4100475-4100589)
chr2 (18-133)||(4778892-4779007)
chr2 (17-100)||(10548325-10548408)
chr2 (35-126)||(18763624-18763715)
chr2 (26-157)||(25087185-25087315)
chr2 (35-133)||(31788612-31788710)
chr2 (61-139)||(40659751-40659829)
chr2 (29-157)||(7015512-7015641)
chr2 (38-135)||(17248991-17249088)
chr2 (15-139)||(20046901-20047026)
chr2 (17-137)||(41431167-41431288)
chr2 (15-139)||(41712608-41712733)
chr2 (30-157)||(459077-459204)
chr2 (17-101)||(4904023-4904107)
chr2 (18-130)||(18107599-18107711)
chr2 (61-157)||(30420853-30420949)
chr2 (69-157)||(30923276-30923364)
chr2 (50-126)||(31580487-31580563)
chr2 (78-157)||(7558653-7558732)
chr2 (34-133)||(8809435-8809533)
chr2 (15-62)||(18695190-18695237)
chr2 (17-139)||(27477287-27477410)
chr2 (28-126)||(32678943-32679041)
chr2 (34-101)||(37416865-37416932)
chr2 (18-133)||(37876452-37876567)
chr2 (35-133)||(1421832-1421929)
chr2 (35-101)||(12554059-12554125)
chr2 (69-139)||(27949618-27949688)
chr2 (17-126)||(32913379-32913489)
chr2 (17-157)||(3725319-3725460)
chr2 (70-139)||(6174009-6174078)
chr2 (81-157)||(9374364-9374440)
chr2 (113-157)||(13718971-13719015)
chr2 (34-130)||(31128634-31128725)
chr2 (58-126)||(34471293-34471361)
[»] chr1 (61 HSPs)
chr1 (17-157)||(5701398-5701539)
chr1 (15-157)||(51868446-51868589)
chr1 (26-139)||(38520354-38520468)
chr1 (30-157)||(41081505-41081633)
chr1 (28-139)||(50165918-50166030)
chr1 (34-157)||(44915787-44915913)
chr1 (15-157)||(45425867-45426010)
chr1 (17-157)||(19723452-19723593)
chr1 (25-136)||(39927377-39927489)
chr1 (92-155)||(799655-799718)
chr1 (17-139)||(5324378-5324500)
chr1 (26-157)||(11454083-11454217)
chr1 (35-133)||(34878123-34878221)
chr1 (34-157)||(47133051-47133176)
chr1 (15-139)||(9687024-9687149)
chr1 (17-157)||(11709508-11709649)
chr1 (28-139)||(25406103-25406215)
chr1 (26-137)||(40880834-40880946)
chr1 (31-102)||(4397112-4397183)
chr1 (15-137)||(7997926-7998049)
chr1 (34-101)||(13144689-13144756)
chr1 (15-125)||(27872874-27872985)
chr1 (35-109)||(14872788-14872862)
chr1 (28-157)||(51872013-51872143)
chr1 (38-135)||(19061061-19061158)
chr1 (38-135)||(24583102-24583199)
chr1 (15-154)||(28035276-28035414)
chr1 (25-157)||(5856048-5856180)
chr1 (35-126)||(19596312-19596403)
chr1 (17-155)||(19715698-19715837)
chr1 (15-101)||(33817025-33817112)
chr1 (15-101)||(33876495-33876582)
chr1 (34-101)||(36775587-36775654)
chr1 (18-156)||(48365568-48365707)
chr1 (34-109)||(48750333-48750408)
chr1 (35-101)||(3228418-3228484)
chr1 (28-157)||(9172640-9172770)
chr1 (28-157)||(9180622-9180752)
chr1 (35-133)||(16989520-16989618)
chr1 (15-101)||(21947495-21947581)
chr1 (26-139)||(31130412-31130526)
chr1 (35-133)||(35484236-35484334)
chr1 (91-137)||(50730828-50730874)
chr1 (17-101)||(3871547-3871632)
chr1 (38-135)||(44543424-44543521)
chr1 (17-157)||(50148509-50148650)
chr1 (35-126)||(31919138-31919229)
chr1 (34-101)||(32679018-32679085)
chr1 (17-139)||(33291237-33291360)
chr1 (34-101)||(34412969-34413036)
chr1 (35-126)||(45415707-45415798)
chr1 (35-109)||(5983985-5984059)
chr1 (35-101)||(7836673-7836739)
chr1 (26-139)||(32676954-32677063)
chr1 (26-139)||(50271959-50272073)
chr1 (38-135)||(24583298-24583395)
chr1 (18-101)||(7311963-7312047)
chr1 (34-126)||(15431518-15431610)
chr1 (61-137)||(20266486-20266562)
chr1 (18-54)||(32873788-32873824)
chr1 (31-111)||(49648742-49648822)
[»] chr4 (56 HSPs)
chr4 (17-139)||(44947559-44947682)
chr4 (23-157)||(46990932-46991067)
chr4 (15-157)||(4644003-4644146)
chr4 (25-157)||(12265617-12265749)
chr4 (34-135)||(36204222-36204323)
chr4 (26-157)||(47417818-47417950)
chr4 (15-157)||(45227842-45227985)
chr4 (26-139)||(49410379-49410493)
chr4 (17-157)||(9528678-9528819)
chr4 (24-157)||(21554611-21554744)
chr4 (17-157)||(25274030-25274171)
chr4 (34-135)||(36161876-36161977)
chr4 (17-157)||(38706511-38706652)
chr4 (23-149)||(3335973-3336100)
chr4 (17-139)||(51318132-51318255)
chr4 (35-133)||(35348473-35348571)
chr4 (17-157)||(53616451-53616592)
chr4 (21-109)||(7006567-7006655)
chr4 (27-157)||(1532065-1532196)
chr4 (34-133)||(2520944-2521043)
chr4 (15-157)||(9284056-9284199)
chr4 (26-156)||(10359351-10359481)
chr4 (34-101)||(36194873-36194940)
chr4 (17-147)||(52097727-52097858)
chr4 (28-109)||(6972968-6973050)
chr4 (18-145)||(18138730-18138855)
chr4 (15-156)||(21090287-21090429)
chr4 (35-109)||(21686111-21686185)
chr4 (18-145)||(49125943-49126068)
chr4 (17-157)||(9645325-9645466)
chr4 (17-101)||(10389611-10389696)
chr4 (35-124)||(11299864-11299953)
chr4 (26-102)||(27593685-27593762)
chr4 (26-155)||(36184688-36184817)
chr4 (17-101)||(43153871-43153956)
chr4 (38-135)||(47320255-47320352)
chr4 (34-107)||(51888082-51888155)
chr4 (15-139)||(56199241-56199366)
chr4 (17-101)||(19853389-19853473)
chr4 (66-138)||(34024258-34024330)
chr4 (26-157)||(37188396-37188528)
chr4 (17-133)||(54022008-54022123)
chr4 (34-101)||(9714075-9714142)
chr4 (15-157)||(43444537-43444680)
chr4 (18-101)||(48257509-48257592)
chr4 (69-139)||(29966526-29966596)
chr4 (17-98)||(49680684-49680766)
chr4 (35-133)||(56040491-56040589)
chr4 (34-135)||(28857566-28857667)
chr4 (18-146)||(35261340-35261469)
chr4 (34-135)||(43853608-43853709)
chr4 (26-157)||(2115389-2115521)
chr4 (33-109)||(9048828-9048904)
chr4 (18-126)||(22611332-22611440)
chr4 (18-82)||(28514925-28514989)
chr4 (18-126)||(43510345-43510453)
[»] chr3 (50 HSPs)
chr3 (15-157)||(32607599-32607742)
chr3 (18-139)||(22803163-22803285)
chr3 (26-139)||(39917217-39917331)
chr3 (17-157)||(25631327-25631468)
chr3 (26-157)||(12116239-12116371)
chr3 (39-135)||(50194178-50194274)
chr3 (28-157)||(3848720-3848850)
chr3 (35-101)||(40487470-40487536)
chr3 (17-157)||(25162568-25162709)
chr3 (26-157)||(36906263-36906395)
chr3 (37-133)||(43017035-43017131)
chr3 (18-133)||(4711610-4711725)
chr3 (35-133)||(33580025-33580123)
chr3 (34-157)||(35175548-35175673)
chr3 (34-99)||(23799789-23799854)
chr3 (15-139)||(44907218-44907343)
chr3 (78-155)||(46979803-46979880)
chr3 (34-126)||(19619857-19619949)
chr3 (34-130)||(51303491-51303587)
chr3 (58-157)||(24396317-24396416)
chr3 (18-97)||(44959854-44959933)
chr3 (18-101)||(48650611-48650694)
chr3 (38-157)||(628742-628863)
chr3 (18-132)||(21431741-21431855)
chr3 (51-133)||(35864811-35864893)
chr3 (35-133)||(38545944-38546042)
chr3 (35-101)||(38859989-38860055)
chr3 (17-157)||(17237937-17238078)
chr3 (34-135)||(27856309-27856410)
chr3 (17-137)||(29503593-29503714)
chr3 (66-139)||(46934821-46934894)
chr3 (34-107)||(51923871-51923944)
chr3 (38-135)||(53807701-53807798)
chr3 (27-126)||(38854868-38854968)
chr3 (35-123)||(43488445-43488533)
chr3 (18-101)||(9998595-9998678)
chr3 (18-101)||(10229604-10229687)
chr3 (18-101)||(10233198-10233281)
chr3 (34-101)||(20987632-20987699)
chr3 (18-133)||(52922962-52923077)
chr3 (34-100)||(7792065-7792131)
chr3 (35-101)||(10108381-10108447)
chr3 (35-101)||(21533686-21533752)
chr3 (35-101)||(32701636-32701702)
chr3 (35-101)||(40556847-40556913)
chr3 (35-133)||(45568290-45568388)
chr3 (26-139)||(50611237-50611351)
chr3 (30-135)||(4821946-4822051)
chr3 (34-130)||(19339319-19339415)
chr3 (28-139)||(49552043-49552155)
[»] chr8 (48 HSPs)
chr8 (27-127)||(42447858-42447959)
chr8 (26-157)||(11725831-11725963)
chr8 (26-139)||(9498418-9498532)
chr8 (26-137)||(43135400-43135512)
chr8 (15-157)||(43192148-43192291)
chr8 (35-133)||(16928600-16928698)
chr8 (26-155)||(33299005-33299135)
chr8 (17-157)||(4809106-4809247)
chr8 (17-156)||(37565681-37565821)
chr8 (17-139)||(2656012-2656135)
chr8 (17-139)||(34611946-34612069)
chr8 (27-157)||(44099737-44099868)
chr8 (17-157)||(9072860-9073001)
chr8 (17-149)||(11197025-11197158)
chr8 (26-157)||(28239992-28240124)
chr8 (17-139)||(11464313-11464436)
chr8 (34-133)||(28086655-28086754)
chr8 (35-126)||(31013458-31013549)
chr8 (26-101)||(36033543-36033618)
chr8 (34-109)||(45445678-45445753)
chr8 (35-133)||(7677126-7677224)
chr8 (35-133)||(9637252-9637350)
chr8 (35-133)||(30568164-30568262)
chr8 (26-123)||(33342585-33342683)
chr8 (34-136)||(41060103-41060205)
chr8 (17-157)||(9619158-9619299)
chr8 (29-157)||(11267162-11267291)
chr8 (17-157)||(14906724-14906865)
chr8 (17-157)||(23851295-23851436)
chr8 (28-133)||(40618916-40619021)
chr8 (78-157)||(19876402-19876481)
chr8 (34-133)||(27110308-27110407)
chr8 (66-157)||(29777411-29777502)
chr8 (36-135)||(33347362-33347461)
chr8 (59-109)||(4757482-4757532)
chr8 (35-133)||(7883084-7883182)
chr8 (35-101)||(23230791-23230857)
chr8 (65-135)||(24099097-24099167)
chr8 (34-100)||(27498242-27498308)
chr8 (19-101)||(28897841-28897923)
chr8 (35-101)||(37971431-37971497)
chr8 (18-157)||(39152943-39153084)
chr8 (18-98)||(17693491-17693572)
chr8 (34-139)||(25238430-25238535)
chr8 (35-100)||(43833872-43833937)
chr8 (38-126)||(15344459-15344547)
chr8 (38-126)||(15433524-15433612)
chr8 (38-126)||(15524828-15524916)
[»] chr6 (34 HSPs)
chr6 (26-157)||(17334897-17335029)
chr6 (26-157)||(28634914-28635046)
chr6 (15-139)||(35001723-35001848)
chr6 (17-157)||(4088595-4088736)
chr6 (17-157)||(16892617-16892758)
chr6 (17-157)||(17237087-17237228)
chr6 (26-137)||(8027939-8028051)
chr6 (17-157)||(8497102-8497244)
chr6 (17-139)||(12059592-12059715)
chr6 (27-157)||(25064381-25064512)
chr6 (35-126)||(33053020-33053111)
chr6 (35-101)||(3913451-3913517)
chr6 (28-157)||(16419304-16419434)
chr6 (17-157)||(7880903-7881044)
chr6 (18-101)||(606334-606417)
chr6 (17-139)||(7875863-7875986)
chr6 (29-139)||(12653091-12653202)
chr6 (17-139)||(33740397-33740520)
chr6 (36-134)||(20225999-20226097)
chr6 (36-134)||(22119983-22120081)
chr6 (17-157)||(4984368-4984509)
chr6 (33-157)||(23947118-23947243)
chr6 (77-137)||(17346375-17346435)
chr6 (17-124)||(33110746-33110854)
chr6 (34-101)||(14801973-14802040)
chr6 (34-125)||(30608368-30608459)
chr6 (30-101)||(30879595-30879666)
chr6 (34-157)||(31296966-31297091)
chr6 (34-126)||(127815-127905)
chr6 (34-135)||(546177-546278)
chr6 (114-159)||(8266863-8266908)
chr6 (34-135)||(30776809-30776910)
chr6 (28-139)||(10228825-10228937)
chr6 (35-133)||(32327065-32327160)
[»] scaffold0884 (1 HSPs)
scaffold0884 (35-133)||(1818-1916)
[»] scaffold0445 (1 HSPs)
scaffold0445 (35-133)||(1490-1588)
[»] scaffold0603 (1 HSPs)
scaffold0603 (36-109)||(7862-7935)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-157)||(201174-201315)
[»] scaffold0113 (1 HSPs)
scaffold0113 (113-157)||(36491-36535)
[»] scaffold0088 (1 HSPs)
scaffold0088 (17-101)||(50904-50988)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-153)||(361604-361732)
[»] scaffold0009 (1 HSPs)
scaffold0009 (34-133)||(57933-58032)
[»] scaffold0127 (1 HSPs)
scaffold0127 (35-101)||(15638-15704)
[»] scaffold0039 (1 HSPs)
scaffold0039 (31-157)||(53219-53345)
[»] scaffold0022 (1 HSPs)
scaffold0022 (61-139)||(83256-83333)
[»] scaffold0219 (1 HSPs)
scaffold0219 (36-133)||(14716-14813)
[»] scaffold0146 (1 HSPs)
scaffold0146 (17-157)||(16121-16262)
[»] scaffold0311 (1 HSPs)
scaffold0311 (26-109)||(8835-8919)
[»] scaffold0050 (1 HSPs)
scaffold0050 (35-101)||(65919-65985)
[»] scaffold0026 (1 HSPs)
scaffold0026 (35-101)||(71747-71813)
[»] scaffold0495 (1 HSPs)
scaffold0495 (28-139)||(5544-5656)
[»] scaffold0136 (1 HSPs)
scaffold0136 (26-62)||(34678-34714)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 16 - 266
Target Start/End: Original strand, 3861074 - 3861324
Alignment:
Q  16 aatatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3861074 aatatttcggtcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcataatt 3861173  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttgatcaccatctcttgaatacctgtgacaaatcatctaaatcctataatatatttgagtta 215  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3861174 tacgtttttagtgatgttgaatggggtactctatcaatttgatcaccatctcttgaatacctgtgacaaatcatctaaatcctataatatatttgagtta 3861273  T
Q  216 gaagatttttccaatctggtcttaactttgagggtttccaaagtaacattt 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3861274 gaagatttttccaatctggtcttaactttgagggtttccaaagtaacattt 3861324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 3861466 - 3861524
Alignment:
Q  250 tttccaaagtaacatttaactacaaccaacaatatcttttaaataaaatgcacctcaaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3861466 tttccaaagtaacatttaactacaaccaacaatatcttttaaataaaatgcaccacaaa 3861524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 46822148 - 46822291
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| ||||||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |      
T  46822148 gaatattccgatcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcc 46822247  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||||| |||||||||| ||| ||| || ||||||    
T  46822248 tttacgtttttagtggtgttgaatgatgtaatctctcgatttga 46822291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 6559010 - 6559135
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||||||||||| | | || | || || || | ||||||| ||| |||||||||| ||||||||||||||||||||| | |    
T  6559010 gaatattccggtcactttaattttatcatatatttttgcaagcattatgtcgttatatgctattaacttggatgctatgagtttgttcacatattcatca 6559109  T
Q  114 tttacgtttttagtgatgttgaatga 139  Q
    ||||||||||||||  ||||||||||    
T  6559110 tttacgtttttagtagtgttgaatga 6559135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 21266523 - 21266647
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    |||||||||| | |||||| ||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | |||||||||||||| |||| | |    
T  21266523 gaatatttcggtgactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacagattcatca 21266622  T
Q  114 tttacgtttttagtgatgttgaatg 138  Q
    ||||||||||||| | |||||||||    
T  21266623 tttacgtttttagcggtgttgaatg 21266647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 31235725 - 31235585
Alignment:
Q  18 tatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||| ||||||||||||||||||||| | | | ||||||| || |||| ||||||| ||| |||||||||| | |||||||||||||| |||| |  |||    
T  31235725 tattccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacaaattcattcttt 31235626  T
Q  117 acgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||| ||| |||||||| |||  ||||| ||||||    
T  31235625 acgtttttagcgatattgaatgatgtaacctatcgatttga 31235585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 35261441 - 35261573
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || |||| || |||| ||| ||||||||| || ||||||||||| || |||| |  |||| ||||||    
T  35261441 tcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgcagattcatcctttatgttttt 35261540  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    |||| |||| ||||| |||||||||||||||||    
T  35261541 agtggtgttaaatgatgtactctatcaatttga 35261573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 46244213 - 46244068
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatg-------ttatgagtttgttcacatattc 109  Q
    |||||| | ||||||||||||||||||||||| ||||||| ||||| |||| |||||||| |||| |||||       |||||||||||||  || ||||    
T  46244213 atattttggtcactttaattttatcatattatttgtaggcattttgtcattgtatgttattaactcggatgttgtgacttatgagtttgtttgcagattc 46244114  T
Q  110 gtaatttacgtttttagtgatgttgaatgaggtactctatcaattt 155  Q
     | |||||||||||||| ||| || ||||| ||||||||| |||||    
T  46244113 attatttacgtttttagcgatattaaatgatgtactctattaattt 46244068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 433635 - 433492
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || | |||||||||||||||||| | | ||||||| || |||  ||||||| ||| |||||||||||| ||||||||||| || |||| |      
T  433635 gaatattccggtgactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcc 433536  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| | |||||||||| ||| ||| || ||||||    
T  433535 tttacgtttttagcggtgttgaatgatgtaatctctcgatttga 433492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 32521861 - 32521730
Alignment:
Q  27 cactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    |||||| |||||||||||| | | ||||||| || |||| ||||||||||| |||||||||||| |||||||||||||| |||| |  |||||| |||||    
T  32521861 cacttttattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgttgtgagtttgttcacaaattcatcctttacgatttta 32521762  T
Q  126 gtgatgttgaatgaggtactctatcaatttga 157  Q
      | |||||||||| ||| || ||| ||||||    
T  32521761 acggtgttgaatgatgtaatccatcgatttga 32521730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 48061570 - 48061668
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||||||||||||||| || ||||    ||||||||||||| ||||||    
T  48061570 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttagagatgtt 48061668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 2843183 - 2843042
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || || | ||||||| ||| | ||| |||| | ||||||||||||||||||| |  ||    
T  2843183 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattagcttagatgctgtgagtttgttcacatattcatcctt 2843084  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| |||||||||    
T  2843083 tacgtttttagcggtgttgaatgatgtaatctctcaatttga 2843042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 26492500 - 26492641
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || ||   ||||||| ||| |||||||||| | |||||||||||||| |||| |  ||    
T  26492500 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcacagattcatcttt 26492599  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  26492600 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 26492641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 155
Target Start/End: Complemental strand, 43369706 - 43369577
Alignment:
Q  26 tcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||||||||||||| | ||||| ||||||| || |||| ||| |||||| ||| | | |||||||| ||| |||  |  |||||||||| |    
T  43369706 tcactttaattttatcatattatttataggcattttgccgttgtatgatattaacttgtatgatgtaagtttgtttacaaatttatcctttacgttttca 43369607  T
Q  126 gtgatgttgaatgaggtactctatcaattt 155  Q
    | ||| |||||||| ||| |||||||||||    
T  43369606 gcgatattgaatgatgtaatctatcaattt 43369577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 7640708 - 7640576
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||| ||||||| | | | ||||| || || | ||||||| ||| |||||||||||| ||||||||||| || |||| | ||||||||||||    
T  7640708 tcactttaatttcatcatatatttttataggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgttttt 7640609  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| || ||||||    
T  7640608 agcggtgttgaatgatgtaatctctcgatttga 7640576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 23425306 - 23425194
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||| ||||||||||| | | ||||||| || |||| ||||||||||| |||||||||| | | ||| |||||| | |||| | ||||||||||||    
T  23425306 tcactttacttttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgttagtatgttcatagattcatcatttacgttttt 23425207  T
Q  125 agtgatgttgaat 137  Q
    || ||||||||||    
T  23425206 agcgatgttgaat 23425194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 34899567 - 34899452
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| |||| || ||||||| || |||| ||| |||||||||||| ||||||||||| || ||||    ||||    
T  34899567 tatttcggtgacttaagttttatcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcacccttta 34899468  T
Q  118 cgtttttagtgatgtt 133  Q
    ||||||||| ||||||    
T  34899467 cgtttttagcgatgtt 34899452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 40993288 - 40993403
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||| | || |||||||| ||||||| |||| ||||||||||| || ||||    ||||    
T  40993288 tatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcacccttta 40993387  T
Q  118 cgtttttagtgatgtt 133  Q
    ||||||||| ||||||    
T  40993388 cgtttttagcgatgtt 40993403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 20116767 - 20116857
Alignment:
Q  67 tatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||| ||| |||||||||||| |||||||||||||| |||| | |||||||||||||| | ||| |||||| ||| ||| || ||||||    
T  20116767 tatatgctattaacttggatgttgtgagtttgttcacagattcatcatttacgtttttagcggtgtggaatgatgtaatctctcgatttga 20116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 22927801 - 22927671
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||||||||||| || | ||||||||||| || |||| |  ||||| |||||||    
T  22927801 actttaattttatcatatatttttgtaggcattatgccgttatatgctatcaacttggttgctgtgagtttgttcgcaaattcatcctttacatttttag 22927702  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| || ||||||    
T  22927701 cggtgttgaatgatgtaatctctcgatttga 22927671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 35667174 - 35667052
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | |||| || || ||   ||||||| ||| |||||||||||  |||||||||||||| |||| | |||    
T  35667174 atattccggtcactttaattttatcatatatttttgtatgcattatgttgttatatgatattaacttggatgtcgtgagtttgttcacaaattcatcatt 35667075  T
Q  116 tacgtttttagtgatgttgaatg 138  Q
    ||||||||||| | |||||||||    
T  35667074 tacgtttttagcggtgttgaatg 35667052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 35496117 - 35495976
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | |||||||||||  | |||| |   |    
T  35496117 atatttcggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgtagattcatccct 35496018  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  35496017 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 35495976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 46822686 - 46822586
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||| | ||||| |||| |||| ||| |||||||||||| ||||||||||| |||||||    ||||||||| ||| ||||||    
T  46822686 attttatcatattatttgtag-cattttgtcattgtatgctattaacttggatgttgtgagtttgttcgcatattcactttttacgtttgtagcgatgtt 46822588  T
Q  134 ga 135  Q
    ||    
T  46822587 ga 46822586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 17611588 - 17611667
Alignment:
Q  78 aacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||||| ||||||||||| || |||| |   ||| ||||||||  ||||||||||| |||||||||||||||||    
T  17611588 aacttggatgttgtgagtttgttcgcagattcatcccttatgtttttagcaatgttgaatgatgtactctatcaatttga 17611667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 19404701 - 19404602
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||||||||||| ||  | | ||| |||||||||| | ||||||||||| || |||| |  ||||| ||||||| ||||||    
T  19404701 attttatcatattatttgtaggctttttgccgttgcacgctattaacttggatgctgtgagtttgttcgcagattcatcctttacatttttagcgatgtt 19404602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 38798928 - 38798995
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||||||||||| ||||||| ||||||| |  |||| ||| |||||||||||| |||||||||||    
T  38798928 attttatcatattatttgtaggcattttgccgtcttatgctattaacttggatgttgtgagtttgttc 38798995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 13796872 - 13796806
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||| | || |||| ||| |||||||||||| |||||||||||    
T  13796872 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgttc 13796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 28044699 - 28044633
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| | ||| | ||||||| || |||| ||| ||||||||||||||||||||||||    
T  28044699 ttttatcatattatttttagacattttgccgttgtatgctattaacttggatgttatgagtttgttc 28044633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 37837401 - 37837303
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||  ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||| |||||||    ||||||||||||| ||||||    
T  37837401 ttttatcatattacttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatgtt 37837303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 39171533 - 39171435
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || ||||||||||||  || ||||    ||||||||||||| ||||||    
T  39171533 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacgtttttagcgatgtt 39171435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 42978758 - 42978856
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| |||||| |||| || ||||    ||||||||||||| ||||||    
T  42978758 ttttatcatattatatgtaggcattttgccgttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctttacgtttttagcgatgtt 42978856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 45349742 - 45349676
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| |||||||||||    
T  45349742 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttc 45349676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 1448772 - 1448699
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgtt 89  Q
    ||||| ||||||||||||||||||||||| | | ||||||| || |||| ||||||| ||| ||||||||||||    
T  1448772 atattccgatcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgtt 1448699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 32684803 - 32684944
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||| ||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | | |||||||||  | |||| |  ||    
T  32684803 atattccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgtagattcatcctt 32684902  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  32684903 tacgtttttagcggtgttgaatgatgtagtctctcgatttga 32684944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 12141252 - 12141152
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaactt-ggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgt 132  Q
    ||||||||||||||| |||| || ||||||| || |||| ||| ||||| || |||| ||||||||||| |||||||    ||||||||||||| |||||    
T  12141252 attttatcatattatttgtatgcattttgccgttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttacgtttttagcgatgt 12141153  T
Q  133 t 133  Q
    |    
T  12141152 t 12141152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 17222933 - 17222857
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||||||||| | | ||||||| || |||| ||||||| ||  |||||||||||| |||||||||||    
T  17222933 tcactttaattttatcatatatttttgtaggcattatgccgttatatgctagtaacttggatgttgtgagtttgttc 17222857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 20083482 - 20083614
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||| ||||||||||| | | ||||||| || || | ||||| | ||| ||||| |||||||| ||||||||| || |||| | |||||| ||| |    
T  20083482 tcactttagttttatcatatatttttgtaggcattatgtcgttatacgctattaactttgatgttattagtttgttcgcagattcatcatttacatttgt 20083581  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || |||||| ||||| ||||| |||| ||||||    
T  20083582 agcgatgttaaatgatgtactatatcgatttga 20083614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 19297001 - 19297084
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||  ||||||| ||| || |||| |||| |||||||||||    
T  19297001 tatttcggtaacttaagttttatcatattatttgtaggcattttgctgttatatgctattaatttgggtgttgtgagtttgttc 19297084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 29845001 - 29845092
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||||| ||||||  ||||  |||| || || ||||||||| ||||| |||||||||||| | |||  | |||||||||||||    
T  29845001 attttatcatattatttgtaggtattttttcattgtacgtaatcaacttgaatgttgtgagtttgttcatagatttatcatttacgttttta 29845092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 46339239 - 46339298
Alignment:
Q  66 ttatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||| |||||||||| | |||||||||||||| |||| |  ||||||||||||    
T  46339239 ttatatgttattaacttggatgatgtgagtttgttcacagattcatcctttacgttttta 46339298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 46700165 - 46700248
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgtt 100  Q
    |||||||| | ||||  ||||||||||||||| | ||||| ||||||| ||||||| ||| |||| || |||| ||||||||||    
T  46700165 atatttcggtgacttagattttatcatattatttataggcattttgccgttatatgctattaactagggtgttgtgagtttgtt 46700248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 8001489 - 8001391
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| | ||||| ||||||| || |||| ||| ||||||| || | ||||||||||| || ||||    ||||||||||||| ||||||    
T  8001489 ttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 8001391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 9450080 - 9450006
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| || || | |||| ||||||||||| |||||||    
T  9450080 ttttatcatattatttgtaggcattttgccgttgtatgctattaatttaggtgttgtgagtttgttcgcatattc 9450006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 23085667 - 23085797
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || || | ||||||| ||| || ||||||  | ||||||||||| || |||| |  |||||||||||||    
T  23085667 actttaattttatcatatatttttgtaggcattatgtcgttatatgctattaatttggatactgtgagtttgttcgcagattcatcctttacgtttttag 23085766  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| || ||||||    
T  23085767 cggtgttgaatgatgtaatctctcgatttga 23085797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 23786719 - 23786833
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | |||| || || ||   ||||||| ||||||||| |||| | ||||||||||| || |||| | ||||||||||||    
T  23786719 tcactttaattttatcatatatttttgtatgcattatgttgttatatgctatcaacttagatgctgtgagtttgttcgcagattcatcatttacgttttt 23786818  T
Q  125 agtgatgttgaatga 139  Q
    ||   ||||||||||    
T  23786819 agctgtgttgaatga 23786833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 24320010 - 24319960
Alignment:
Q  59 tttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||| || |||| ||||||| |||||||| |||||||||||||||||||    
T  24320010 tttgccgttttatgctatcaacatggatgttgtgagtttgttcacatattc 24319960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 24351177 - 24351239
Alignment:
Q  73 ttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    |||| |||||||||| ||||||||||||| || |||| |  ||||||||||||| ||||||||    
T  24351177 ttattaacttggatgctatgagtttgttcgcagattcatcctttacgtttttagcgatgttga 24351239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 28407861 - 28407795
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||| | ||||||| || |||| ||| |||||||||| | |||||||||||    
T  28407861 ttttatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttc 28407795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 48304179 - 48304109
Alignment:
Q  59 tttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtga 129  Q
    |||||| || |||| ||| ||| |||||||||||||||||||||||||||| |  |||  |||||||||||    
T  48304179 tttgccgttttatgctattaacatggatgttatgagtttgttcacatattcatcctttttgtttttagtga 48304109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 45198975 - 45198834
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || ||||||| |||||||||||| | | ||||||  || || | ||||||  ||| |||||||||||| ||||| ||||| || |||| |  ||    
T  45198975 atattccggtcactttgattttatcatatatttttgtaggtattatgtcgttatatactattaacttggatgttgtgagtatgttcgcagattcatcctt 45198876  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  45198875 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 45198834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 100
Target Start/End: Original strand, 47590459 - 47590524
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgtt 100  Q
    |||||||||||||| ||||||| ||||||| || || | ||| ||||||| |||| ||||||||||    
T  47590459 ttttatcatattatttgtaggcattttgccgttgtaagctattaacttgggtgttgtgagtttgtt 47590524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 20257629 - 20257497
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || || | ||||||||||| |||||||||| | |||||||||||||| |||| | ||||||||||||    
T  20257629 tcactttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatcatttacgttttt 20257530  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || ||||||||||||  || |||||| ||||||    
T  20257529 agcgatgttgaatgatataatctatcgatttga 20257497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 3271344 - 3271203
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| ||||||||||||||||||||||| | | |||| || || || | ||||||| ||| |||||||||||||||||||||||| || |||| |  ||    
T  3271344 atattccgatcactttaattttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgttatgagtttgttcgcagattcatcctt 3271245  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  3271244 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 3271203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 13422077 - 13422176
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||| |||| || || |||| ||| |||||||||||| ||||||||||| ||||||| |  ||||||||||||| ||||||    
T  13422077 attttatcatattatatgtaggcatttttccgttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttacgtttttagcgatgtt 13422176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 13468736 - 13468856
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||| | | ||||| ||| ||||| ||| || |||||||||||  | |||| | |||||    
T  13468736 tattttgatcactttagttttatcatattatgtgtaggcattttgtcgtcatatgctattaactttgattttgtgagtttgttcgtaaattcatcattta 13468835  T
Q  118 cgtttttagtgatgttgaatg 138  Q
     ||||||||  ||||||||||    
T  13468836 tgtttttagatatgttgaatg 13468856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 4954127 - 4954270
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || | |||||||||||||||||| | | ||||||| || |||| ||||||| ||| ||||| |||||| ||||||||||||||||||| |      
T  4954127 gaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacatattcatcc 4954226  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||| ||||||| | ||||||| || ||| ||| || ||||||    
T  4954227 tttacatttttagcggtgttgaacgatgtaatctctcgatttga 4954270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 43008223 - 43008116
Alignment:
Q  50 tgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctat 149  Q
    ||||||| || |||| ||||||| ||| |||||||||||||||||||||||| || |||  |  ||||||||||||||| |||||||||| ||| ||| |    
T  43008223 tgtaggcattatgccgttatatgctattaacttggatgttatgagtttgttctcaaatttatcctttacgtttttagtggtgttgaatgatgtaatctct 43008124  T
Q  150 caatttga 157  Q
    | ||||||    
T  43008123 cgatttga 43008116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 7241932 - 7242062
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  |||||||||||||    
T  7241932 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 7242031  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| || ||||||    
T  7242032 cggtgttgaatgatgtaatctctcgatttga 7242062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 7247107 - 7247237
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  |||||||||||||    
T  7247107 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 7247206  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| || ||||||    
T  7247207 cggtgttgaatgatgtaatctctcgatttga 7247237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 11976878 - 11976780
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| |||| || || |||||||| |||||||||||| ||||||||||| || |||| |  ||||| ||||||| ||||||    
T  11976878 ttttatcatattatttgtaggcattttcccgttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcgatgtt 11976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 30298990 - 30299104
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| ||||| ||||| || |||| |  |||||||||||    
T  30298990 tcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttctgagtatgttcgcagattcatcctttacgttttt 30299089  T
Q  125 agtgatgttgaatga 139  Q
    || | ||||||||||    
T  30299090 agcggtgttgaatga 30299104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 19259754 - 19259613
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||  |  ||    
T  19259754 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttattctt 19259655  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| ||||||||| || ||| ||| || ||||||    
T  19259654 tacgtttttagcgatgttgaacgatgtaatctctcgatttga 19259613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 27266801 - 27266660
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || ||   ||||||| ||| |||||||||| | ||||||||||| || |||| | |||    
T  27266801 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcatt 27266702  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  27266701 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 27266660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 15571053 - 15571177
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||||||| || |||| |   ||| ||||||    
T  15571053 tcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccattatgttttt 15571152  T
Q  125 agtgatgttgaatgaggtactctat 149  Q
    |||| |||||||||| ||| |||||    
T  15571153 agtggtgttgaatgatgtaatctat 15571177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 43148875 - 43148987
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||||| |||||||    
T  43148875 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttag 43148974  T
Q  127 tgatgttgaatga 139  Q
     | ||||||||||    
T  43148975 cggtgttgaatga 43148987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 10332491 - 10332366
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||| |||||||| | ||||||| ||||| | ||||||| ||| ||||||| || | |||||||||||||| |||| |  ||||||||||||| ||||||    
T  10332491 atttcatcatattttttgtaggcattttgtctttatatgctattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttagcgatgtt 10332392  T
Q  134 ga--atgaggtactctatcaatttga 157  Q
    ||   ||| ||| |||||||||||||    
T  10332391 gattctgatgtattctatcaatttga 10332366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 14726404 - 14726306
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||| | || |||  ||| |||||||||| | |||||||||||||| ||||    ||||||||||||||||||||    
T  14726404 ttttatcatattatttgtaggcattttgtcgttttataatattaacttggatgctgtgagtttgttcacagattcaccctttacgtttttagtgatgtt 14726306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 28235722 - 28235831
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccat--tatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||||||||||||||||||||||||| | | ||||||| || |||| |  |||||| ||| |||||||||||| ||||||||||| || |||| | |    
T  28235722 atatttcgatcactttaattttatcatatatttttgtaggcattatgccgttatatatgctattaacttggatgttgtgagtttgttcgcagattcatca 28235821  T
Q  114 tttacgtttt 123  Q
    ||||| ||||    
T  28235822 tttacatttt 28235831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 38007503 - 38007600
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||||||||||    ||||||||||||| ||||||    
T  38007503 ttttatcatattatttgtaggcattttgcc-ttttatgctattaacttgggtgctgtgagtttgttcacatattcaccttttacgtttttagcgatgtt 38007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 38597942 - 38598067
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt- 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||    ||||||||||||| ||||||     
T  38597942 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagcgatgttt 38598041  T
Q  134 gaat--gaggtactctatcaatttga 157  Q
    | ||  || |||||||||||||||||    
T  38598042 gtatctgatgtactctatcaatttga 38598067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 21060225 - 21060084
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || || | ||||||  |||||||||||||||| ||||| |||||  | |||| |  ||    
T  21060225 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatattctatcaacttggatgttgtgagtatgttcgtagattcatcctt 21060126  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  21060125 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 21060084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 27752062 - 27752203
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || | |||||||||| ||| |||||||||| | ||||| |||||  | |||| |  ||    
T  27752062 atattccggtcactttaattttatcatatatttttgtaggcattataccattatatgctattaacttggatgctgtgagtatgttcgtagattcatcttt 27752161  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  27752162 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 27752203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 8088152 - 8088064
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||||||||||||||| || |||| |  ||||| |||||||    
T  8088152 tatcatattatttgtaggcattttgcctttgtatgctattaacttgggtgttatgagtttgttcgcagattcatcttttacctttttag 8088064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 9113686 - 9113570
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||||||| | |||| | |||||||||||||| ||||||| |||| || || |||| ||| ||||||| |||| ||||||||||| || ||||    |||    
T  9113686 atatttcggtgacttaagttttatcatattatttgtaggcatttttccgttgtatgctattaacttgggtgttctgagtttgttcgcagattcacccttt 9113587  T
Q  117 acgtttttagtgatgtt 133  Q
    |||||||||| ||||||    
T  9113586 acgtttttagcgatgtt 9113570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 34881863 - 34881995
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    ||||||||||| |||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| ||||||||||  || |||| |  |||| ||||||    
T  34881863 tcactttaattatatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtttgcagattcatcctttatgttttt 34881962  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| || ||||||    
T  34881963 agcggtgttgaatgatgtaatctctcgatttga 34881995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 35475271 - 35475139
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| |   | | ||||||| ||| |||||||||||| ||||| |||||  |||||| |  |||||||||||    
T  35475271 tcactttaattttatcatatatttttgtaggcataacgtcgttatatgctattaacttggatgttgtgagtatgttcgtatattcatcctttacgttttt 35475172  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| |||||||||    
T  35475171 agcggtgttgaatgatgtaatctctcaatttga 35475139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7150277 - 7150154
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| | |||||||||||||||||| | | ||||| | || |||| ||||||| ||| || ||||||| | ||||||||||| || ||| ||  ||    
T  7150277 atatttcggtgactttaattttatcatatatttttgtagtcattatgccgttatatgctattaatttggatgctgtgagtttgttcgcagatttgttctt 7150178  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| | ||||||||||    
T  7150177 tacgtttttagcggtgttgaatga 7150154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 8096441 - 8096375
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| |||||||||| |||| ||| ||||||| || | |||||||||||    
T  8096441 ttttatcatattatttgtaggcattttgccattttatgctattaacttgggtggtgtgagtttgttc 8096375  T

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Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 10649781 - 10649920
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| ||||||| ||| || ||||||||| ||||  ||||| || |||| | |||    
T  10649781 atattccggtcactttaattttatcatatgtttttgtaggcattatgccgttatatggtattaaattggatgttgtgag--tgttcgcagattcatcatt 10649878  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||  | |||||||||| ||| ||| || ||||||    
T  10649879 tacgtttttaacggtgttgaatgatgtaatctctcgatttga 10649920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 24229727 - 24229629
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||| || ||||    ||||||||||||| ||||||    
T  24229727 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacgtttttagcgatgtt 24229629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 25980302 - 25980400
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| ||||||| ||| ||||||| || | ||||||||||  || ||||    ||||||||||||| ||||||    
T  25980302 ttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 25980400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 781525 - 781666
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||| | || |||| ||||||| ||| |||||||||||| ||||| | ||| || |||| |  ||    
T  781525 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagtatattcgcagattcatcctt 781624  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
     |||||||||| | |||||||||| ||| ||| || ||||||    
T  781625 cacgtttttagcggtgttgaatgatgtaatctctcgatttga 781666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 16981479 - 16981552
Alignment:
Q  66 ttatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||||||||||||| | ||||||||||    
T  16981479 ttatatgctattaacttggatgttgtgagtttgttcgcagattcattctttacgtttttagcggtgttgaatga 16981552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 18677407 - 18677267
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | |||| || || |||| ||||||| ||| |||||||||||| || |||||||| || |||| |   |    
T  18677407 atattccggtcactttaattttatcatatatttttgtaagcattatgccgttatatgctattaacttggatgttgtgtgtttgttcgcagattcat-cct 18677309  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  18677308 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 18677267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 11768145 - 11768257
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||| | || |||| ||||||| ||| | |||||||| | ||||||||||| || |||| |  | |||||||||    
T  11768145 tcactttaattttatcatatatttttgtagccattatgccgttatatgctattatcttggatgatgtgagtttgttcgcagattcatcctatacgttttt 11768244  T
Q  125 agtgatgttgaat 137  Q
    || ||||||||||    
T  11768245 agcgatgttgaat 11768257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 2979250 - 2979183
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||| |||||||||| ||||||| || |||| || |||| ||| |||||||||||| |||||||||||    
T  2979250 atttcatcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttc 2979183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 8772061 - 8771982
Alignment:
Q  78 aacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||| ||||||||||||  || |||| |  ||||||||||||||| |||||||||| ||| ||| || ||||||    
T  8772061 aacttggatgctatgagtttgtttgcaaattcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttga 8771982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 11192507 - 11192578
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgtt 89  Q
    ||||||||||||||||| |||||| |||||| |||| || ||||| | || |||||||| ||||| ||||||    
T  11192507 tatttcgatcactttaaatttatcgtattatttgtaagcattttgtcgttgtatgttattaactttgatgtt 11192578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 13007357 - 13007472
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||  || ||||    ||||    
T  13007357 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcacccttta 13007456  T
Q  118 cgtttttagtgatgtt 133  Q
    ||||||||| ||||||    
T  13007457 cgtttttagcgatgtt 13007472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 26825558 - 26825641
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  26825558 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 26825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 34945521 - 34945636
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| | ||||| ||||| | || |||| ||| ||||||| |||| ||||||||||| || ||||    ||||    
T  34945521 tatttcggtgacttaagttttatcatattatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcacccttta 34945620  T
Q  118 cgtttttagtgatgtt 133  Q
    ||||||||| ||||||    
T  34945621 cgtttttagcgatgtt 34945636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7886880 - 7886758
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    ||||| || ||||| || |||||||||||| | ||||||| || | |  ||||||| ||| |||||||||  | |||||||||||||| |||| |  |||    
T  7886880 atattccggtcactatagttttatcatattttttgtaggcattattctgttatatgctattaacttggatactgtgagtttgttcacagattcatctttt 7886781  T
Q  117 acgtttttagtgatgttgaatga 139  Q
    ||||| |||| | ||||||||||    
T  7886780 acgttcttagcggtgttgaatga 7886758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 31391696 - 31391630
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| |||| |  || |||| ||| |||||||||||| |||||||||||    
T  31391696 ttttatcatattatatgtaggcatttttctgttgtatgctattaacttggatgttgtgagtttgttc 31391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 7612986 - 7612866
Alignment:
Q  31 ttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtga 129  Q
    ||||||||||||||| | | ||||||| || || | || |||| ||| || ||| ||||| ||||||||||| || |||| |  ||||||||||||| |     
T  7612986 ttaattttatcatatatttttgtaggcattatgtcgttctatgctattaaattgaatgttgtgagtttgttcgcaaattcatcttttacgtttttagcgg 7612887  T
Q  130 tgttgaatgaggtactctatc 150  Q
    |||||||||| | ||||||||    
T  7612886 tgttgaatgatgaactctatc 7612866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 30298397 - 30298469
Alignment:
Q  67 tatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    |||||| ||| |||||||||||| ||||| ||||| || |||| |  ||||||||||||| | ||||||||||    
T  30298397 tatatgctattaacttggatgttgtgagtatgttcgcagattcattctttacgtttttagcggtgttgaatga 30298469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 8806005 - 8806146
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| ||||||| ||||||| ||| |||||||||||| |||| |||||| || |||| |  ||    
T  8806005 atattccggtcactttaattttatcatatatttttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattcatcctt 8806104  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| |||||||||||| ||| ||| || ||||||    
T  8806105 tacgtttttagcgatgttgaatgatgtaatctctcgatttga 8806146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 2808414 - 2808292
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| ||||||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | |||| ||||||||| |||| |  ||    
T  2808414 atattccgatcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgag-ttgttcacagattcatcctt 2808316  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| ||||||||||||    
T  2808315 tacgtttttagcgatgttgaatga 2808292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 9986275 - 9986144
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||||||| || |||| |  |||||||||||    
T  9986275 tcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttt 9986176  T
Q  125 agtgatgttgaatgaggtactctatcaatttg 156  Q
    || | |||||||||| ||| ||| || |||||    
T  9986175 agcggtgttgaatgatgtaatctctcgatttg 9986144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 34600351 - 34600494
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| |  ||||||||||||| |||| |      
T  34600351 gaatattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgcgagtttgttcacagattcatcc 34600450  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| | ||||||| || ||| ||| || ||||||    
T  34600451 tttacgtttttagcggtgttgaacgatgtaatctctcgatttga 34600494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 157
Target Start/End: Complemental strand, 40625949 - 40625858
Alignment:
Q  66 ttatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||| ||| |||||| ||||||||||||||||| || |||| | |||||||||||||| |||||||||||| ||| ||| || ||||||    
T  40625949 ttatatgctattaacttgaatgttatgagtttgttcgcagattcatcatttacgtttttagcgatgttgaatgatgtaatctctcgatttga 40625858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 17994691 - 17994596
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgt----tatcaacttggatgttatgagtttgttcacatattc 109  Q
    ||||||| | |||| |||||||||||||||| ||||||| |||||||||| |||||    ||| |||||||||||| ||||||||||| |||||||    
T  17994691 tatttcggtgacttaaattttatcatattatttgtaggcattttgccattgtatgtatgctattaacttggatgttgtgagtttgttcgcatattc 17994596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 32448557 - 32448436
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga-- 135  Q
    ||||||||||| ||||||| ||||||| || |||| ||| |||||||||||| |||||||||||| | |||| | |||||  ||||||||||| ||||      
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcatagattcatcatttatatttttagtgatcttgatt 32448458  T
Q  136 atgaggtactctatcaatttga 157  Q
     ||| ||| |||||||||||||    
T  32448457 ctgatgtattctatcaatttga 32448436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 37994439 - 37994564
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||| ||||||  ||||||| ||| ||||||| |||| ||||||||||| || |||| |  |||||| |||||| ||||||    
T  37994439 attttatcatattatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacgattttagggatgtt 37994538  T
Q  134 ga--atgaggtactctatcaatttga 157  Q
    ||   ||| ||| |||||||||||||    
T  37994539 gattctgatgtattctatcaatttga 37994564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 41694776 - 41694877
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| | ||||| ||||| | ||||||||||| ||||| | |||| | |||||||||||| |||| | |||||||||||||| ||||||    
T  41694776 attttatcatattatttataggcattttgtcgttatatgttattaactttggtgtt-taagtttgttcacaaattcatcatttacgtttttagcgatgtt 41694874  T
Q  134 gaa 136  Q
    |||    
T  41694875 gaa 41694877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 18114007 - 18114147
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||||||||||| ||||||||||||||||||  | ||| | |||||||  | ||| |||| |||||||||  | ||||||||||| ||||||     |||    
T  18114007 atatttcgatcaatttaattttatcatattacttttagacattttgccgctgtatattattaacttggattatgtgagtttgttcgcatatttacccttt 18114106  T
Q  117 acgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    | |||||| ||||||||||||||  |||| |||||||||||    
T  18114107 atgttttttgtgatgttgaatgatatactttatcaatttga 18114147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 132
Target Start/End: Complemental strand, 29279521 - 29279417
Alignment:
Q  28 actttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagt 127  Q
    |||| |||||||||||||||| ||||||| ||||||| || |||| ||| ||||  | |||| ||||||||||| |||||||   ||||||||||||||     
T  29279521 acttaaattttatcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgtttttagc 29279422  T
Q  128 gatgt 132  Q
    |||||    
T  29279421 gatgt 29279417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 32445463 - 32445367
Alignment:
Q  29 ctttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||| |||||| |||| |  ||||||  ||||||||||| |||||||||||  ||||||||||  ||||||| | |||||||||||||    
T  32445463 ctttaattttatcttattatttgtaagagttttgcagttatatgttattaacttggatgtagtgagtttgttggcatattcatcatttacgttttta 32445367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 27249093 - 27248970
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | |||| || || |||| ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||    
T  27249093 atattccggtcactttaatttcatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 27248994  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| | ||||||||||    
T  27248993 tacgtttttagcggtgttgaatga 27248970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 38445305 - 38445412
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| |||||||||| |||||||| ||||| | || | ||||||||||| || |||| |  ||||    
T  38445305 tatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgttattaactttggtgctgtgagtttgttcgcagattcatccttta 38445404  T
Q  118 cgttttta 125  Q
    ||||||||    
T  38445405 cgttttta 38445412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 4228261 - 4228403
Alignment:
Q  17 atatttcgatcactttaatttt-atcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaat 114  Q
    ||||| |||||||||||||||| ||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||||||| || |||| |  |    
T  4228261 atattccgatcactttaatttttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcct 4228360  T
Q  115 ttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||| ||||||| | |||||||||| ||| ||| || ||||||    
T  4228361 ttacatttttagcggtgttgaatgatgtaatctctcgatttga 4228403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 9169200 - 9169103
Alignment:
Q  37 ttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa---tttacgtttttagtgatgtt 133  Q
    |||||||||||| ||||||| ||||||| || |||| ||| |||||||||| | |||||||||||||| ||||  ||   ||||||||||||||||||||    
T  9169200 ttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcacagattc--aaccctttacgtttttagtgatgtt 9169103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 11985177 - 11985079
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||  || |||  ||| |||||||||||| ||| ||||||| || |||| | |||||||||||||| ||||||    
T  11985177 ttttatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcgatgtt 11985079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 17319468 - 17319582
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | ||| ||||| || || | ||||||||||| |||||||||||  ||||||||||| || |||| |  |||||||||||    
T  17319468 tcactttaattttatcatatatttgtataggcattatgtcgttatatgttattaacttggatgtcgtgagtttgttcgcagattcatcctttacgttttt 17319567  T
Q  125 agtgatgttgaatga 139  Q
    |  | ||||||||||    
T  17319568 accggtgttgaatga 17319582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 33585679 - 33585589
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    |||||||||||||| |||| || ||||||| || |||| ||| ||||||| |||| ||||||||||| ||||||| |  ||||||||||||    
T  33585679 ttttatcatattatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacgttttta 33585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 36692030 - 36692104
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| |||||||||||||| ||||    
T  36692030 ttttatcatattatttgtaggcattttgccgttttatgctattaacttggttgttgtgagtttgttcacagattc 36692104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 84113 - 84000
Alignment:
Q  27 cactttaattttatcatattatgt-gtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    |||||||||||||||||||  | | |||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  ||||||||||||    
T  84113 cactttaattttatcatatattttcgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgttttta 84014  T
Q  126 gtgatgttgaatga 139  Q
    | | ||||||||||    
T  84013 gcggtgttgaatga 84000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 8971570 - 8971429
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||| | || |||| ||||||| ||| |||||||||| | ||||||||||| ||||||| |  ||    
T  8971570 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttcgcatattcatcctt 8971471  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||| || |||| | |||||||||| ||| ||| || ||||||    
T  8971470 tacattcttagcggtgttgaatgatgtaatctctcgatttga 8971429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 7646617 - 7646725
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||    ||||    
T  7646617 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcacctttta 7646716  T
Q  118 cgtttttag 126  Q
    |||||||||    
T  7646717 cgtttttag 7646725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 18056403 - 18056304
Alignment:
Q  37 ttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaa 136  Q
    |||||||||||| |||| |  ||||| |||| |||||| | ||||| |||||||||||||||||  ||||||| | ||||||||| ||| ||||||||||    
T  18056403 ttatcatattatttgtaagtattttgtcattgtatgttgttaacttagatgttatgagtttgtttgcatattc-tcatttacgttattaatgatgttgaa 18056305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 25509029 - 25508887
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||||| ||||  |||||||| |||||| ||||||| ||||||| || |||||||| ||||||| || | ||||||||||| || |||| |  ||||    
T  25509029 tatttcgatgacttagattttatcgtattatttgtaggcattttgccgttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgttta 25508930  T
Q  118 cgtttttagtgatgt---tgaatgaggtactctatcaatttga 157  Q
     |||||||  |||||   |  |||| |||||||||||||||||    
T  25508929 tgtttttaccgatgtttgtatatgatgtactctatcaatttga 25508887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 36234190 - 36234278
Alignment:
Q  69 tatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||| ||| |||||||||||| |||||||||||||| |||| |  ||||||||||||| | |||||||||| ||| ||| || ||||||    
T  36234190 tatgctattaacttggatgttgtgagtttgttcacagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttga 36234278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 4100475 - 4100589
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||    ||||    
T  4100475 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgatattaacttgg-tgttgtgagtttgttcgcagattcacccttta 4100573  T
Q  118 cgtttttagtgatgtt 133  Q
    ||||||||| ||||||    
T  4100574 cgtttttagcgatgtt 4100589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 4778892 - 4779007
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||||||| || |||| || | ||||||||||| || ||||    ||||    
T  4778892 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgttattaatttgggtgctgtgagtttgttcgcagattcacccttta 4778991  T
Q  118 cgtttttagtgatgtt 133  Q
    ||||||||| ||||||    
T  4778992 cgtttttagcgatgtt 4779007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 10548325 - 10548408
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgtt 100  Q
    |||||||| ||||||||||||| ||| ||||| | ||||| |||||   || |||||||| |||||||||||| ||||||||||    
T  10548325 atatttcggtcactttaattttctcaaattatttataggcattttgttgttgtatgttattaacttggatgttgtgagtttgtt 10548408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 18763624 - 18763715
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||    |||||||||||||    
T  18763624 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 18763715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 25087185 - 25087315
Alignment:
Q  26 tcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    |||||||||| |||||||||  | ||||||| ||  ||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  |||||| |||||    
T  25087185 tcactttaatcttatcatatattttgtaggcattaagccgttatatgctattaacttggatgatgtgagtttgttcccagattcatcctttacg-tttta 25087283  T
Q  126 gtgatgttgaatgaggtactctatcaatttga 157  Q
    ||| |||||||||| ||| ||| || ||||||    
T  25087284 gtggtgttgaatgatgtaatctctcgatttga 25087315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 31788612 - 31788710
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||| |||||||| ||||||| ||||||| || |||| ||| |||||||||| | ||||||||||| || ||||    ||||||||||||| ||||||    
T  31788612 ttttaacatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 31788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 40659829 - 40659751
Alignment:
Q  61 tgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    |||| ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||||||||||||| | ||||||||||    
T  40659829 tgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatga 40659751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 7015641 - 7015512
Alignment:
Q  29 ctttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagt 127  Q
    ||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |   ||||||||||||     
T  7015641 ctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcattcgttacgtttttagc 7015542  T
Q  128 gatgttgaatgaggtactctatcaatttga 157  Q
      |||||||||| ||| ||| || ||||||    
T  7015541 tgtgttgaatgatgtaatctctcgatttga 7015512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 17249088 - 17248991
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||| ||||| | ||||||| || |||| ||| ||||||| || | ||||||||||| || |||| | |||||||||||||| ||| ||||    
T  17249088 tatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacgtttttagcgatcttga 17248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 20047026 - 20046901
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || | |||||||||||||||||| | | ||||||| || || | |||||| |||| |||||||||| | ||| ||||||| || |||| |      
T  20047026 gaatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatcttattaacttggatgctgtgattttgttcgcagattcatcc 20046927  T
Q  114 tttacgtttttagtgatgttgaatga 139  Q
    ||||||||||||| | ||||||||||    
T  20046926 tttacgtttttagcggtgttgaatga 20046901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 41431167 - 41431288
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| |||| |||||||||||||||||| | | ||||||| || |||| ||||||  ||| |||||||||||| ||||||| ||| || |||  |  ||    
T  41431167 atattccgatgactttaattttatcatatatttttgtaggcattatgccgttatatactattaacttggatgttgtgagtttattcgcagatttatcctt 41431266  T
Q  116 tacgtttttagtgatgttgaat 137  Q
    ||||||||||| | ||||||||    
T  41431267 tacgtttttagcggtgttgaat 41431288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 41712733 - 41712608
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || ||| |||||||||||||||| | | ||||||  || |||  ||||||||||| |||||  || || ||||||||||| || |||  | |    
T  41712733 gaatattccggtcattttaattttatcatatatttttgtaggtattatgcagttatatgttattaacttatatattgtgagtttgttcgcagatttatca 41712634  T
Q  114 tttacgtttttagtgatgttgaatga 139  Q
    ||||| ||||||||||||||||||||    
T  41712633 tttacatttttagtgatgttgaatga 41712608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 459204 - 459077
Alignment:
Q  30 tttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtg 128  Q
    |||||||||||||||| | | ||||| | || |||||||||||| ||| ||||| |||||| |||||||||||  | |||  |  |||| ||||||||||    
T  459204 tttaattttatcatatatttttgtagacattatgccattatatgctattaactttgatgttttgagtttgttcgtagatt-atcttttatgtttttagtg 459106  T
Q  129 atgttgaatgaggtactctatcaatttga 157  Q
     ||||||||||  ||||||||| ||||||    
T  459105 gtgttgaatgatatactctatcgatttga 459077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 4904107 - 4904023
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||| | ||||  ||||||||||||||| ||||| | ||||| | || |||| ||| |||||||||||| |||||||||||    
T  4904107 atatttcggtgacttagattttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttc 4904023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 18107711 - 18107599
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||||| ||||  | || |||||||||| ||||||| ||||| | || ||| |||| ||||||  |||| ||||||||||| |||||||    ||||    
T  18107711 tatttcgatgacttagaattaatcatattatttgtaggcattttgtcgttttatattattaacttgcgtgttgtgagtttgttcgcatattcactcttta 18107612  T
Q  118 cgtttttagtgat 130  Q
    |||||||||||||    
T  18107611 cgtttttagtgat 18107599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 30420853 - 30420949
Alignment:
Q  61 tgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||| ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||||| ||||||| | |||||||||| ||| ||| || ||||||    
T  30420853 tgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttga 30420949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 30923364 - 30923276
Alignment:
Q  69 tatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||| ||| |||||| ||||| | ||||||||| || |||| | ||||||| ||||||  ||||| ||||| |||||||||||||||||    
T  30923364 tatgatattaacttgaatgttgtaagtttgttcgcagattcattatttacgattttagcaatgttaaatgatgtactctatcaatttga 30923276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 31580563 - 31580487
Alignment:
Q  50 tgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| | ||||||||||||||    
T  31580563 tgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcatttacgtttttag 31580487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 7558653 - 7558732
Alignment:
Q  78 aacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||| ||||||||||||| || |||| |  ||||||||||||||| |||| ||||| ||| ||| || ||||||    
T  7558653 aacttggatgctatgagtttgttcgcaaattcatcctttacgtttttagtggtgttaaatgatgtaatctctcgatttga 7558732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 8809435 - 8809533
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||||  |||| | ||||| | || |||| ||| |||||||||||| ||||||||||| || || | |  ||||||||||||||||||||    
T  8809435 attttatcatattata-gtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgcagatccatcttttacgtttttagtgatgtt 8809533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 18695190 - 18695237
Alignment:
Q  15 gaatatttcgatcactttaattttatcatattatgtgtaggctttttg 62  Q
    ||||||||||| |||||||||||||||||||||| | ||||| |||||    
T  18695190 gaatatttcgaccactttaattttatcatattatttataggcattttg 18695237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 27477287 - 27477410
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| |||||||||||||||||||| | | ||||||| || | || ||| ||  ||| |||||||||||| ||||| ||||| || |||| | |||    
T  27477287 atatttcggtcactttaattttatcatatatttttgtaggcattataccgttaaatactattaacttggatgttgtgagtatgttcgcagattcatcatt 27477386  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||| ||||||   |||||||||||    
T  27477387 tacatttttaacaatgttgaatga 27477410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 32679041 - 32678943
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||| ||||| ||||||||||| || |||| | ||||| ||||||||    
T  32679041 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttg-atgttgtgagtttgttcgcagattcatcatttatgtttttag 32678943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 37416865 - 37416932
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||||||||||| ||||| | ||||||| || |||||| | ||||||| |||||| |||||||||    
T  37416865 attttatcatattatttgtagacattttgccgttgtatgttgttaacttgggtgttataagtttgttc 37416932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 37876567 - 37876452
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| |||||||||||||||| ||||||| ||||||| |  |||| ||| ||||||| || |  |||||||||| || ||||   |||||    
T  37876567 tatttcggtgacttaaattttatcatattatttgtaggcattttgccgtcgtatgctattaacttgggtgatgcgagtttgttcgcagattcaccattta 37876468  T
Q  118 cgtttttagtgatgtt 133  Q
     |||||||| ||||||    
T  37876467 tgtttttagcgatgtt 37876452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 1421832 - 1421929
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||| | || |||| ||| ||||||| |||| ||||||||||  || ||||    ||||||||||||||||||||    
T  1421832 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgcagattc-acctttacgtttttagtgatgtt 1421929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 12554125 - 12554059
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||| | || |||| ||| ||||||| |||| |||||||||||    
T  12554125 ttttatcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttc 12554059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 27949618 - 27949688
Alignment:
Q  69 tatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    |||| ||| |||||||||||| |||||||||||  | |||| | |||||||||||||| | ||||||||||    
T  27949618 tatgctattaacttggatgttgtgagtttgttcggagattcatcatttacgtttttagcggtgttgaatga 27949688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 32913379 - 32913489
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | |||| || || |||| ||||||| ||| |||||||||||| ||||| ||||| || |||| |  ||    
T  32913379 atattacggtcactttaattttatcatatatttttgtatgcattatgccgttatatgctattaacttggatgttgtgagtatgttcgcagattcatcctt 32913478  T
Q  116 tacgtttttag 126  Q
    |||| ||||||    
T  32913479 tacgattttag 32913489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 3725319 - 3725460
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| |||||||||||||||| |||||| | | ||||||| ||  ||| ||||||| ||| |  ||||||| | | |||||||| ||| |||| |  ||    
T  3725319 atattccgatcactttaattttttcatatatttttgtaggcattacgccgttatatgctattagtttggatgatgtaagtttgtttacagattcatcctt 3725418  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| |||| ||||| ||| ||| || ||||||    
T  3725419 tacgtttttagtggtgttaaatgatgtaatctctcgatttga 3725460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 6174009 - 6174078
Alignment:
Q  70 atgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    ||||||| |||||||||||| ||||||||||| || |||| |  ||||| ||||||| | ||||||||||    
T  6174009 atgttattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatga 6174078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 9374440 - 9374364
Alignment:
Q  81 ttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||| ||| ||| ||| ||||||| | ||||||||||||||   |||||||||| ||||||| || ||||||    
T  9374440 ttggatgttgtgaattttttcgcatattcatcatttacgtttttagccgtgttgaatgatgtactctgtcgatttga 9374364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 13719015 - 13718971
Alignment:
Q  113 atttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||||||| |||||||||||| | ||||||||| |||||    
T  13719015 atttacgtttttagcgatgttgaatgatgcactctatcattttga 13718971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 31128725 - 31128634
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgat 130  Q
    ||||||||||||||| ||||||| ||||||| ||||||      |||||||||||| ||||||||||| || |||  |  ||||| |||||||||||    
T  31128725 attttatcatattatttgtaggcattttgccgttatatt-----aacttggatgttgtgagtttgttcgcagattaatcctttacatttttagtgat 31128634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 34471293 - 34471361
Alignment:
Q  58 ttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||| || |||| ||| ||| |||||||| ||||||||||||||||||| | ||||  ||||||||    
T  34471293 ttttgccgttttatgctattaacatggatgttgtgagtttgttcacatattcatcatttttgtttttag 34471361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 5701398 - 5701539
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | ||||||||| || |||| ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||    
T  5701398 atattccggtcactttaatttcatcatatatttgtgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 5701497  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| |||||||||    
T  5701498 tacgtttttagcggtgttgaatgatgtaatctctcaatttga 5701539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 51868589 - 51868446
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| |||| |||||||||||||||||| | | ||||||| || |||| ||||||||||| |||||||||| | ||||||||||| || |||| |      
T  51868589 gaatattccgatgactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgtgagtttgttcgcaaattcatcc 51868490  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| | |||||||||| ||| ||| || ||||||    
T  51868489 tttacgtttttagcggtgttgaatgatgtaatctctcgatttga 51868446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 38520468 - 38520354
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||| ||| | | ||||||| || | || ||||||| ||| |||||||||||| |||||||||||||| |||| |  |||||||||||    
T  38520468 tcactttaattttatcgtatatttttgtaggcattataccgttatatgctattaacttggatgttgtgagtttgttcacaaattcatcctttacgttttt 38520369  T
Q  125 agtgatgttgaatga 139  Q
    |||||||||||||||    
T  38520368 agtgatgttgaatga 38520354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 41081633 - 41081505
Alignment:
Q  30 tttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtg 128  Q
    |||||||||||||||| | | ||||||| || |||  ||||||||||| |||| ||||||| |||||||||||||| |||| |  |||||||||||||      
T  41081633 tttaattttatcatatatttttgtaggcattatgcagttatatgttattaactcggatgttgtgagtttgttcacagattcatgttttacgtttttagca 41081534  T
Q  129 atgttgaatgaggtactctatcaatttga 157  Q
     |||||||||| |||||||||| ||||||    
T  41081533 ctgttgaatgatgtactctatcgatttga 41081505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 50166030 - 50165918
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| |||||||||||||| |||| |  |||||||||||||    
T  50166030 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcacagattcatcctttacgtttttag 50165931  T
Q  127 tgatgttgaatga 139  Q
     | ||||||||||    
T  50165930 cggtgttgaatga 50165918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 44915787 - 44915913
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||| ||||||| || |||| |||| |||||| || | ||||||||||| ||||||| |  ||||||||||||||||||||    
T  44915787 attttatcatattatttgtaggcattttgccgttgtatgctatcgacttgggtgatgtgagtttgttcgcatattcatcctttacgtttttagtgatgtt 44915886  T
Q  134 -gaat--gaggtactctatcaatttga 157  Q
     | ||  || |||||||||||||||||    
T  44915887 tgtatctgatgtactctatcaatttga 44915913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 45426010 - 45425867
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    |||||||||| |||||||||||||||||||| | | ||||||| || | || ||||||| ||| |||||||||| | ||||||| ||| || |||| | |    
T  45426010 gaatatttcggtcactttaattttatcatatatttttgtaggcattataccgttatatgctattaacttggatgctgtgagtttattcgcagattcatca 45425911  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| ||| || ||||| ||| ||| |||||||||    
T  45425910 tttacgtttttagcgatattaaatgatgtaatctctcaatttga 45425867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 19723452 - 19723593
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| | |||||||||||||||||| | | ||||||| || || | ||||||||||| |||||||||| | ||||||| ||| || |||| |  ||    
T  19723452 atatttcggttactttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgctgtgagtttattcgcagattcatcctt 19723551  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| |||||||||| ||| ||| || ||||||    
T  19723552 tacgtttttagtggtgttgaatgatgtaatctctcgatttga 19723593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 39927489 - 39927377
Alignment:
Q  25 atcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttt 123  Q
    ||||||||||||||||||||| | | ||||||| || |||| |||||| |||| || ||||||||| ||||||||||| ||||||| |  |||| |||||    
T  39927489 atcactttaattttatcatatatttttgtaggcattatgccgttatatcttattaatttggatgttgtgagtttgttcgcatattcatcctttatgtttt 39927390  T
Q  124 tagtgatgttgaa 136  Q
    ||| |||||||||    
T  39927389 tagcgatgttgaa 39927377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 799718 - 799655
Alignment:
Q  92 gagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaattt 155  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||| ||||| |||||||||    
T  799718 gagtttgttcacatattcatcatttacgtttttaatgatgttgaatgatgtactttatcaattt 799655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 5324500 - 5324378
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||||| |||| |||||| || |||| |  ||    
T  5324500 atatttcggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgag-ttgttcgcagattcatgctt 5324402  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| ||||||||||||    
T  5324401 tacgtttttagcgatgttgaatga 5324378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 11454083 - 11454217
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgt--tatcaacttggatgttatgagtttgttcacatattcgtaatttacgttt 122  Q
    |||||||||||||||||||| | | ||||||| || ||||||||||| |  ||| |||||||||||| ||||||||||| || |||| |  |||||||||    
T  11454083 tcactttaattttatcatatatttatgtaggcattatgccattatatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttt 11454182  T
Q  123 ttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||| | |||||||||| ||| ||| || ||||||    
T  11454183 ttagcggtgttgaatgatgtaatctctcgatttga 11454217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 34878221 - 34878123
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| |||||||||||||| ||||    ||||||||||||| ||||||    
T  34878221 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcacagattcaccttttacgtttttagcgatgtt 34878123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 47133051 - 47133176
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||| |||||||| | ||||||| ||||||| ||||||| ||| |||||||||||| ||||||||||| || |||  |  ||||||||||||| ||||||    
T  47133051 atttcatcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagatttatcctttacgtttttagcgatgtt 47133150  T
Q  134 ga--atgaggtactctatcaatttga 157  Q
    ||   ||| ||| |||||||||||||    
T  47133151 gattctgatgtattctatcaatttga 47133176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 9687149 - 9687024
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||| | ||||||||||| || |||| |      
T  9687149 gaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcc 9687050  T
Q  114 tttacgtttttagtgatgttgaatga 139  Q
    ||||||||||||| | ||||||||||    
T  9687049 tttacgtttttagcggtgttgaatga 9687024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 11709649 - 11709508
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| | ||||| ||| || || |||||| ||||||||||| || |||| |  ||    
T  11709649 atattccggtcactttaattttatcatatatttttgtaggcattatgccgtgatatgctattaatttagatgttgtgagtttgttcgcagattcatcctt 11709550  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| |||||||||| ||| ||| || ||||||    
T  11709549 tacgtttttagtggtgttgaatgatgtaatctctcgatttga 11709508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 25406215 - 25406103
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  |||||||||||||    
T  25406215 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcttttacgtttttag 25406116  T
Q  127 tgatgttgaatga 139  Q
     | ||||||||||    
T  25406115 cggtgttgaatga 25406103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 40880946 - 40880834
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || |||  ||||||| ||| |||||||||||| ||||||||||| || || | | ||||||||||||    
T  40880946 tcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcagatgcatcatttacgttttt 40880847  T
Q  125 agtgatgttgaat 137  Q
    || | ||||||||    
T  40880846 agcggtgttgaat 40880834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 4397112 - 4397183
Alignment:
Q  31 ttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttca 102  Q
    |||||||||||||||||| ||||||  ||||| || | |||||||| ||||||||||||||| |||||||||    
T  4397112 ttaattttatcatattatttgtaggtattttgtcactgtatgttattaacttggatgttatgtgtttgttca 4397183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 7997926 - 7998049
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||| ||||||| | | ||||||| || |||| ||||||||||| |||||||||| | ||||||||||  || |||| |      
T  7997926 gaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgtttgcagattcatcc 7998025  T
Q  114 tttacgtttttagtgatgttgaat 137  Q
    ||||||||||||| | ||||||||    
T  7998026 tttacgtttttagcggtgttgaat 7998049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 13144756 - 13144689
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||||||| ||| ||||||| |||||||||| |||| ||| |||||||||||| |||||||||||    
T  13144756 attttatcataatatttgtaggcattttgccattttatgctattaacttggatgttgtgagtttgttc 13144689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 27872874 - 27872985
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| | |||| |||||||||||||||| | | |||| || || |||| ||||||||||| |||||| ||||| ||||||||||| || |||| | |    
T  27872874 gaatattccaatcattttaattttatcatatatttttgtaagcattatgccgttatatgttattaacttgaatgttgtgagtttgttcgcagattcatca 27872973  T
Q  114 tttacgttttta 125  Q
    ||||||||||||    
T  27872974 tttacgttttta 27872985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 14872788 - 14872862
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| |||||||||| | ||||||||||| |||||||    
T  14872788 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattc 14872862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 51872013 - 51872143
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||| | ||||||||||| || |||| |  |||||||||||||    
T  51872013 actttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 51872112  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | ||||||| || ||| ||| |||||||||    
T  51872113 cggtgttgaaggatgtaatctctcaatttga 51872143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 19061061 - 19061158
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||| ||||||| ||||||| || |||| ||| |||||||||||| ||||||||||| || |||| |  |||| |||||||| ||| ||||    
T  19061061 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatcttttatgtttttagcgatcttga 19061158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 24583102 - 24583199
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||||| |||| |  ||||||||||||| ||| ||||    
T  24583102 tatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttagcgatcttga 24583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 28035276 - 28035414
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||||||||||  | | ||||||| || |||| ||||||||||| ||||| |||||| |||||||||   || |||| |      
T  28035276 gaatattccggtcactttaattttatcataaatttttgtaggcattatgccgttatatgttattaactttgatgttgtgagtttgt--gcagattcatcc 28035373  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatt 154  Q
    ||||||||||||| | |||||||||| ||| ||| ||||||    
T  28035374 tttacgtttttagcggtgttgaatgatgtaatctctcaatt 28035414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 5856048 - 5856180
Alignment:
Q  25 atcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    ||||||||||||||| |||||||| |||||   ||||||| || |||| ||| |||||| |||||   | |||||||||| |||| | |||||| |||||    
T  5856048 atcactttaattttaccatattatttgtagaaattttgccgttgtatgctattaacttgaatgttgcaaatttgttcacaaattcatcatttactttttt 5856147  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    |   || ||||| || |||||||||||||||||    
T  5856148 aacaatattgaacgatgtactctatcaatttga 5856180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 19596403 - 19596312
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| |||||||||| || |||||||||| || ||||    |||||||||||||    
T  19596403 ttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgctacgagtttgttcgcagattcaccttttacgtttttag 19596312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 19715837 - 19715698
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || |||  ||||||| ||| |||||||||| | ||||||| ||| || |||| |  ||    
T  19715837 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttattcgcagattcatcctt 19715738  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaattt 155  Q
    ||||||||||| | |||||||||| ||| ||| |||||||    
T  19715737 tacgtttttagcggtgttgaatgatgtaatctctcaattt 19715698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 33817112 - 33817025
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| || ||||||||||||| |||||| | | ||||||| || || ||||||||||||| |||||||||| | |||||||||||    
T  33817112 gaatattccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttattaacttggatgatgtgagtttgttc 33817025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 33876582 - 33876495
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| || ||||||||||||| |||||| | | ||||||| || || ||||||||||||| |||||||||| | |||||||||||    
T  33876582 gaatattccggtcactttaattttctcatatatttttgtaggcattatgtcattatatgttattaacttggatgatgtgagtttgttc 33876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 36775654 - 36775587
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||| |||||||||| ||||||| ||||||| || |||| ||| |||||||||||| |||||||||||    
T  36775654 atttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttc 36775587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 48365707 - 48365568
Alignment:
Q  18 tatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||| |||| |||||||||||||||||| | | ||||||  || || | ||||| ||||| |||||||||| | ||||||||||| ||||||  | ||||    
T  48365707 tattccgattactttaattttatcatatatttttgtaggaattatgtcgttataagttattaacttggatgctgtgagtttgttcgcatattaatcattt 48365608  T
Q  117 acgtttttagtgatgttgaatgaggtactctatcaatttg 156  Q
     ||||||||||| || ||||||| | ||| |||| |||||    
T  48365607 gcgtttttagtggtgctgaatgatgcactttatcgatttg 48365568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 48750333 - 48750408
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||| |||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| |||||||    
T  48750333 atttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattc 48750408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 3228418 - 3228484
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| ||||||||||| ||||||| || | || ||||||||    
T  3228418 ttttatcatattatttgtaggcattttgccgttatatgttattaacttgggtgatgtgtgtttgttc 3228484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 9172640 - 9172770
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | | ||||| || ||||  ||| || ||| |||||||||| | ||||||||||| || |||| |  |||||||||||||    
T  9172640 actttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttag 9172739  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| |||||||||    
T  9172740 cggtgttgaatgatgtaatctctcaatttga 9172770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 9180622 - 9180752
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | | ||||| || ||||  ||| || ||| |||||||||| | ||||||||||| || |||| |  |||||||||||||    
T  9180622 actttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgtttttag 9180721  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| |||||||||    
T  9180722 cggtgttgaatgatgtaatctctcaatttga 9180752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 16989520 - 16989618
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||  || |||    |||||||||||||||||||||    
T  16989520 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttagtgatgtt 16989618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 21947581 - 21947495
Alignment:
Q  15 gaatatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||| | |||| | |||||||||||||| ||||||| ||||||| || ||| |||| ||||||| || | |||||||||||    
T  21947581 gaatatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtattttattaacttgggtgatgtgagtttgttc 21947495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 31130526 - 31130412
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    ||||||||||||||| || | | | ||||||| || || | ||||||  ||| |||||||||| | ||||||||||||||||||| |  ||||| |||||    
T  31130526 tcactttaattttattatgtatttttgtaggcattatgtcgttatattctattaacttggatgctgtgagtttgttcacatattcatcctttacattttt 31130427  T
Q  125 agtgatgttgaatga 139  Q
    || ||||||||||||    
T  31130426 agcgatgttgaatga 31130412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 35484334 - 35484236
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| |||| || ||||||| || |||| ||| ||||||| |||| ||||||||||| || |||||   ||||| ||||||| ||||||    
T  35484334 ttttatcatattatttgtaagcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttacatttttagcgatgtt 35484236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 50730828 - 50730874
Alignment:
Q  91 tgagtttgttcacatattcgtaatttacgtttttagtgatgttgaat 137  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||    
T  50730828 tgagtttgttcacatattcatcatttacgtttttagcgatgttgaat 50730874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 3871547 - 3871632
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||| ||||| |||||||| ||||| | | ||||||| || |||| ||||||| ||| |||||||||||| |||||||||||    
T  3871547 atatttcggtcactataattttaacatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttc 3871632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 44543424 - 44543521
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||| || |||| |  ||||||||||||| ||| ||||    
T  44543424 tatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttga 44543521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 50148509 - 50148650
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||  ||| || |||| |  ||    
T  50148509 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttgtttcgcagattcatcctt 50148608  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||| ||||||| |||||||||||| ||| ||| || ||||||    
T  50148609 tacatttttagcgatgttgaatgatgtaatctctcgatttga 50148650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 31919138 - 31919229
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||| ||||| | ||||| | || |||| ||| ||||||||||||  |||||||||| || |||| |  |||||||||||||    
T  31919138 ttttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttag 31919229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 32679085 - 32679018
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||| |||||||| | ||||||| ||||||| |||||||  || |||||||||||| |||||||||||    
T  32679085 atttcatcatattttttgtaggcattttgccgttatatgccattaacttggatgttgtgagtttgttc 32679018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 33291360 - 33291237
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || ||   ||||||| | | |||||||||| | ||||||||||  || |||| | |||    
T  33291360 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctgttaacttggatgctgtgagtttgttagcagattcatcatt 33291261  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    |||||||||| || ||||||||||    
T  33291260 tacgtttttattggtgttgaatga 33291237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 34413036 - 34412969
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||| |||||||||| ||||||| ||||||  || |||||||| ||||||| |||| |||||||||||    
T  34413036 atttcatcatattatttgtaggcattttgcggttgtatgttattaacttgggtgttgtgagtttgttc 34412969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 45415707 - 45415798
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||| ||||||| ||||||| || |||  ||| || |||| |||| ||||||||||| |||||||    |||||||||||||    
T  45415707 ttttatcatattatttgtaggcattttgccgttgtataatattaatttgggtgttgtgagtttgttcgcatattcaccctttacgtttttag 45415798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 109
Target Start/End: Original strand, 5983985 - 5984059
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||| ||||||| ||||| | || |||| ||| ||||||| || | ||||||||||| |||||||    
T  5983985 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgatgtgagtttgttcgcatattc 5984059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 7836739 - 7836673
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  7836739 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttc 7836673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 32677063 - 32676954
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || |||| ||||||      |||||||||| | ||||||||||| || |||| |  |||||||||||    
T  32677063 tcactttaattttatcatatatttttgtaggcattatgccgttatatt-----aacttggatgatgtgagtttgttcgcagattcatcttttacgttttt 32676969  T
Q  125 agtgatgttgaatga 139  Q
    |||| ||||||||||    
T  32676968 agtggtgttgaatga 32676954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 50272073 - 50271959
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    ||||||||||||| |||||| | | ||||||| || |||| ||||||| ||| ||||| |||||| ||||||||||| || |||| |   |||| |||||    
T  50272073 tcactttaattttgtcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatccgttaccttttt 50271974  T
Q  125 agtgatgttgaatga 139  Q
    || | ||||||||||    
T  50271973 agcggtgttgaatga 50271959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 24583298 - 24583395
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||| || |||| |  ||||| ||||||| ||| ||||    
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttacatttttagcgatcttga 24583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 7312047 - 7311963
Alignment:
Q  18 tatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| |||||||| ||||||||||| | | ||||||| || |||| ||||||  ||| ||||||||| |||| |||||||||    
T  7312047 tatttcggtcactttagttttatcatatatttttgtaggcattatgccgttatatactattaacttggatattataagtttgttc 7311963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 15431610 - 15431518
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||||||||||| ||||| | ||||  | || |||| |||  ||||||||||| ||||||||||| || |||| |  |||||||||||||    
T  15431610 attttatcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgtttttag 15431518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 20266486 - 20266562
Alignment:
Q  61 tgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaat 137  Q
    |||| |||||||  || |||||||||||| ||||||| ||| || |||| |  ||||||||||||||| ||||||||    
T  20266486 tgccgttatatgcaattaacttggatgttgtgagtttattcgcagattcatcctttacgtttttagtggtgttgaat 20266562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 32873824 - 32873788
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtag 54  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  32873824 tatttcgatcactttgattttatcatattatttgtag 32873788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 49648822 - 49648742
Alignment:
Q  31 ttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgt 111  Q
    |||||||||| ||||||| ||||  | |||||  ||| |||||||| || |||| || | |||||||||||||||||||||    
T  49648822 ttaattttattatattatttgtaaacattttgttattgtatgttattaatttgggtgatgtgagtttgttcacatattcgt 49648742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 44947559 - 44947682
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| ||||||||||| |||||||||||| ||||||||||| || |||| |  ||    
T  44947559 atattccggtcactttaattttatcatatatttttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgcagattcatcctt 44947658  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| | ||||||||||    
T  44947659 tacgtttttagcggtgttgaatga 44947682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 46991067 - 46990932
Alignment:
Q  23 cgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtt 121  Q
    ||||||||||||||||||||||| | | ||||||| || || | || |||| | | |||||| ||||| ||||||||||| || |||| | |||||||||    
T  46991067 cgatcactttaattttatcatatatttttgtaggcattatgtcgttctatgctgttaacttgaatgttgtgagtttgttcgcagattcatcatttacgtt 46990968  T
Q  122 tttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||  ||||||||| |||||||||| ||||||    
T  46990967 tttagtggcgttgaatgatgtactctatcgatttga 46990932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 4644003 - 4644146
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat--tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgta 112  Q
    ||||||| || ||| ||||||||||||||||  ||| ||||||| || |||| ||||||| ||| |||||||||||| |||| |||||| || |||| |     
T  4644003 gaatattccggtcaatttaattttatcatatattat-tgtaggcattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatc 4644101  T
Q  113 atttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
     ||||||||||||| |||||||||||| ||| ||| || ||||||    
T  4644102 ctttacgtttttagcgatgttgaatgatgtaatctctcgatttga 4644146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 12265617 - 12265749
Alignment:
Q  25 atcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttt 123  Q
    ||||||||||||||||||||| | | | ||||| || |||| ||||||| ||| ||||| |||||| |||||||||||||| |||| | | |||||||||    
T  12265617 atcactttaattttatcatatatttttttaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacagattcatca-ttacgtttt 12265715  T
Q  124 tagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||| |||||||||||| |||  ||||| ||||||    
T  12265716 tagcgatgttgaatgatgtaacctatcgatttga 12265749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 36204323 - 36204222
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| |||||   ||||||||||||||||||| || ||||||||| |||||||||||||| ||||    |||| |||||||| ||||||    
T  36204323 attttatcatattatttgtagatattttgccattatatgttattaatttggatgttgtgagtttgttcacagattcaccctttatgtttttagcgatgtt 36204224  T
Q  134 ga 135  Q
    ||    
T  36204223 ga 36204222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 47417818 - 47417950
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||| ||||||| | | ||||||| || |||| ||||||||||| |||||| ||| | |||||||||||||| |||| |  |||||||||||    
T  47417818 tcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttgaatgctgtgagtttgttcacagattcatcctttacgttttt 47417917  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| || ||||||    
T  47417918 agcggtgttgaatgatgtaatctctcgatttga 47417950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 45227985 - 45227842
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||||||||||| | | ||| ||| || |||  ||||||||||| |||||||||||| |||||||||||  | |||| |      
T  45227985 gaatattccggtcactttaattttatcatatatttttgtgggcattatgcggttatatgttattaacttggatgttgtgagtttgttcgtagattcatcc 45227886  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| | |||||||||| ||| ||| || ||||||    
T  45227885 tttacgtttttagcggtgttgaatgatgtaatctctcgatttga 45227842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 49410379 - 49410493
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || |||| ||||||||||| |||||||||| | ||||||||||| |  |||| |  |||||||||||    
T  49410379 tcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgctgattcatcctttacgttttt 49410478  T
Q  125 agtgatgttgaatga 139  Q
    || | ||||||||||    
T  49410479 agcggtgttgaatga 49410493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 9528819 - 9528678
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||| ||||| ||||||||||| || |||| |  ||    
T  9528819 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttgaatgttgtgagtttgttcgcagattcatcctt 9528720  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  9528719 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 9528678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 21554744 - 21554611
Alignment:
Q  24 gatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttt 123  Q
    ||||| |||||||||||| |||||| ||||||| ||||||| || | || ||| ||||||||||  |||||||||||| ||||||| |  |||| |||||    
T  21554744 gatcattttaattttatcttattatttgtaggcattttgcccttgtttgctattaacttggatgcaatgagtttgttcgcatattcatcctttatgtttt 21554645  T
Q  124 tagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||  ||||||| ||| ||| | || ||||||||    
T  21554644 tagcaatgttgattgatgtaatttaccaatttga 21554611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 25274030 - 25274171
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||  ||||||| ||| ||||| |||||| ||||||||||| || |||| |  ||    
T  25274030 atattccggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcctt 25274129  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  25274130 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 25274171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 36161876 - 36161977
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||| ||| | | ||||||||||| ||||||| |||| |||||||||||||| ||||    ||||||||||||  ||||||    
T  36161876 attttatcatattatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttcacagattcactctttacgtttttaacgatgtt 36161975  T
Q  134 ga 135  Q
    ||    
T  36161976 ga 36161977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 38706652 - 38706511
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| |||||||||||||||||||| | | ||||| | || || | ||||||| ||| |||||||||| | ||||||||||| || |||| |  ||    
T  38706652 atatttcggtcactttaattttatcatatatttttgtagacattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcttt 38706553  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  38706552 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 38706511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 3336100 - 3335973
Alignment:
Q  23 cgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtt 121  Q
    |||||| |||||||||||||||| ||| ||||||| ||  ||| ||||||| ||  |||||| ||||| ||||||||||  || |||| |  ||||||||    
T  3336100 cgatcattttaattttatcatatatatttgtaggcattacgccgttatatgctaataacttgaatgttttgagtttgtttgcagattcatcctttacgtt 3336001  T
Q  122 tttagtgatgttgaatgaggtactctat 149  Q
    ||||| | |||||||||| |||||||||    
T  3336000 tttagcggtgttgaatgatgtactctat 3335973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 51318132 - 51318255
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||| | |||||||||||||| |||| |  ||    
T  51318132 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctt 51318231  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    |||||||||||   ||||||||||    
T  51318232 tacgtttttagcagtgttgaatga 51318255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 35348473 - 35348571
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| |||||||||| |||| ||| ||||||| |||| ||||||||||  || ||||    ||||||||||||| ||||||    
T  35348473 ttttatcatattatttgtaggcattttgccattttatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 35348571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 53616592 - 53616451
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| || |||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  ||    
T  53616592 atattccggtcactttaatttcattatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctt 53616493  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  53616492 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 53616451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 7006655 - 7006567
Alignment:
Q  21 ttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||| ||| | ||||||| | ||||| ||||| |  | |||||||| ||||||||||||||| ||||||||||| ||||    
T  7006655 ttcgatcactttaaatttgtaatattatttataggcattttgtctatgtatgttataaacttggatgttatgtgtttgttcacagattc 7006567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 1532065 - 1532196
Alignment:
Q  27 cactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||||||||| | | ||||| | || |||| ||||||| ||| |||||||||||| |||| |||||| || |||| |  |||| |||||||    
T  1532065 cactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatcctttatgttttta 1532164  T
Q  126 gtgatgttgaatgaggtactctatcaatttga 157  Q
    | | |||||||||| ||| ||| || ||||||    
T  1532165 gcggtgttgaatgacgtaatctctcgatttga 1532196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 2520944 - 2521043
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||| |||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||    ||||||||||||| ||||||    
T  2520944 attttatcgtattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 2521043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 9284056 - 9284199
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    |||||||||  |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| | | |||||||| |||||||||||  | |||| |      
T  9284056 gaatatttcagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattatcatggatgttgtgagtttgttcgtagattcatct 9284155  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| | |||||||||| ||| ||| || ||||||    
T  9284156 tttacgtttttagcggtgttgaatgatgtaatctctcgatttga 9284199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 10359481 - 10359351
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||| ||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  |||||||||||    
T  10359481 tcactttatttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcaaattcat-ctttacgttttt 10359383  T
Q  125 agtgatgttgaatgaggtactctatcaatttg 156  Q
    || | |||||||||| ||| ||| || |||||    
T  10359382 agcggtgttgaatgatgtaatctctcgatttg 10359351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 36194873 - 36194940
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||| |||||||||| ||||||| ||||||| || |||| ||| |||||||||||| |||||||||||    
T  36194873 atttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttc 36194940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 52097858 - 52097727
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||| ||| |||||||    ||    
T  52097858 atattccggtcactttaattttatcatatatctttgtaggcattatgacgttatatggtattaacttggatgttgtgagtttattcgcatattcaccctt 52097759  T
Q  116 tacgtttttagtgatgttgaatgaggtactct 147  Q
    ||||||||||| | | | |||||| |||||||    
T  52097758 tacgtttttagcggtatcgaatgatgtactct 52097727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 6972968 - 6973050
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||||||| | | ||||||  || |||| ||||||| ||| |||||||||| |||||||||||||||| ||||    
T  6972968 actttaattttatcatatatttttgtaggtattatgccgttatatgctattaacttggatgctatgagtttgttcacagattc 6973050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 18138855 - 18138730
Alignment:
Q  18 tatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||| ||||||||| ||||||||||||| | | ||||| | || |||| ||||||| ||| |||||||||||| ||||||||||| || | ||    |||    
T  18138855 tattccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagactc---cttt 18138759  T
Q  117 acgtttttagtgatgttgaatgaggtact 145  Q
    |||||||||| | |||||||||| |||||    
T  18138758 acgtttttagcggtgttgaatgatgtact 18138730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 156
Target Start/End: Original strand, 21090287 - 21090429
Alignment:
Q  15 gaatatttcgatcactttaattttatcatattatgt-gtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||||||||| |  | | |||||| || || | ||||||||||| |||||||||  | ||||||||||  || |||| |      
T  21090287 gaatattccggtcactttaattttatcatctacttttgtaggcattatgtcgttatatgttattaacttggatagtgtgagtttgtttgcagattcatcc 21090386  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttg 156  Q
    ||||||||||||| | |||||||||| ||| ||| ||||||||    
T  21090387 tttacgtttttagcggtgttgaatgatgtaatctctcaatttg 21090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 109
Target Start/End: Complemental strand, 21686185 - 21686111
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||| ||||||| |||||||  | |||||||| ||||||| || | ||||||||||| |||||||    
T  21686185 ttttatcatattatttgtaggcattttgccgctgtatgttattaacttgggtgctgtgagtttgttcgcatattc 21686111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 49126068 - 49125943
Alignment:
Q  18 tatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||| ||||||||| ||||||||||||| | | ||||| | || |||| ||||||| ||| |||||||||||| ||||||||||| || | ||    |||    
T  49126068 tattccgatcacttaaattttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagactc---cttt 49125972  T
Q  117 acgtttttagtgatgttgaatgaggtact 145  Q
    |||||||||| | |||||||||| |||||    
T  49125971 acgtttttagcggtgttgaatgatgtact 49125943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 9645466 - 9645325
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgt-gtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || ||||||||||||||||||||  | | |||||  || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  ||    
T  9645466 atattccggtcactttaattttatcatatacttttgtaggtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 9645367  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||| | | |||||||||| ||| ||| || ||||||    
T  9645366 tacgttttttgcggtgttgaatgatgtaatctctcgatttga 9645325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 10389696 - 10389611
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||| ||||||||||||||||||||||| | | ||||| | || |||| ||||||| ||| |||||||||| | |||||||||||    
T  10389696 atattccgatcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttc 10389611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 11299953 - 11299864
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    ||||||||||||||  |||||| ||||| | || |||||||| ||||||| |||| ||||||||||| || |||| |  |||||||||||    
T  11299953 ttttatcatattattcgtaggcattttggcgttttatgttattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttttt 11299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 27593762 - 27593685
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttca 102  Q
    |||||||||||||||||||| | | ||||||  || |||| ||||||| ||| |||||||||||| ||||||||||||    
T  27593762 tcactttaattttatcatatatttttgtaggaattatgccgttatatgctattaacttggatgttgtgagtttgttca 27593685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 36184688 - 36184817
Alignment:
Q  26 tcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||| ||||||||||| ||| | ||||| ||||| | || |||| ||| |||||||||||| ||||||||||   | |    |  ||||||||||||    
T  36184688 tcactttgattttatcatactatttctaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgtttgtaaaactattctttacgttttta 36184787  T
Q  126 gtgatgttgaatgaggtactctatcaattt 155  Q
    |  ||||||||||| |||||||||||||||    
T  36184788 gcaatgttgaatgatgtactctatcaattt 36184817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 43153956 - 43153871
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| ||||||| | | |||||||||||| |||||||||||    
T  43153956 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctgttaacttggatgttgtgagtttgttc 43153871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 47320352 - 47320255
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||| || |||| |  ||||||||||||| ||| ||||    
T  47320352 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattctttacgtttttagcgatcttga 47320255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 51888155 - 51888082
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatat 107  Q
    ||||||||||||||| ||||||| ||||||||||  ||| ||| ||||| | |||| ||||||||||| |||||    
T  51888155 attttatcatattatttgtaggcgttttgccattgcatgctattaacttaggtgttgtgagtttgttcgcatat 51888082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 56199241 - 56199366
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| |||| |||||||||||||||||| | | ||||| | || |||| ||| ||| ||| |||||||||| | ||||||||||| || |||| |      
T  56199241 gaatattccgatgactttaattttatcatatatttttgtagacattatgccgttacatgctattaacttggatgctgtgagtttgttcgcagattcatcc 56199340  T
Q  114 tttacgtttttagtgatgttgaatga 139  Q
    |||||||||||||   ||||||||||    
T  56199341 tttacgtttttagcagtgttgaatga 56199366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 19853473 - 19853389
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||| | |||| | |||||||||||||| | ||||| ||||||| || |||| ||| ||||||| |||| |||||||||||    
T  19853473 atatttcggtgacttaagttttatcatattatttctaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttc 19853389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 34024330 - 34024258
Alignment:
Q  66 ttatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatg 138  Q
    ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||||||||||||| | |||||||||    
T  34024330 ttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatg 34024258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 37188528 - 37188396
Alignment:
Q  26 tcactttaattttatcatatta-tgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || || ||||||||| ||| |||||||||| | ||||| ||||| || |||  |  ||| |||||||    
T  37188528 tcactttaattttatcatataattttgtaggcattgtgtcattatatgctattaacttggatgctgtgagtgtgttcgcagatttatcttttgcgttttt 37188429  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| || ||||||    
T  37188428 agcggtgttgaatgatgtaatctctcgatttga 37188396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 54022008 - 54022123
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||||||| | ||||  ||||||||||||||| ||||| | ||| | | || |||||||| |||||| ||||||||| |||||||  | |||| | ||||    
T  54022008 atatttcggtgacttagattttatcatattatttgtagacattt-gtcgttgtatgttattaacttgaatgttatgaatttgttcgtagattcattattt 54022106  T
Q  117 acgtttttagtgatgtt 133  Q
    |||||||||| ||||||    
T  54022107 acgtttttagcgatgtt 54022123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 9714075 - 9714142
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||||||||||| ||||||| ||||| |||| |||||| | ||||||  |||| |||||||||||    
T  9714075 attttatcatattatttgtaggcattttgtcattgtatgttgttaacttgagtgttgtgagtttgttc 9714142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 43444537 - 43444680
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| || ||| ||| | ||||||||||| || |||| |      
T  43444537 gaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaatttgaatgctgtgagtttgttcgcagattcatcc 43444636  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||| |||  | |||||||||| ||| ||| |||||||||    
T  43444637 tttacgttcttaacggtgttgaatgatgtaatctctcaatttga 43444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 48257592 - 48257509
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||  ||||||| || |||| ||| ||||||||| || |||||||||||    
T  48257592 tatttcggtgacttgagttttatcatattatttgtaggtattttgccgttgtatgctattaacttggattttgtgagtttgttc 48257509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 29966526 - 29966596
Alignment:
Q  69 tatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    |||| ||| |||||||||||| ||||||||||| || |||| |  ||||||||||||  ||||||||||||    
T  29966526 tatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttaacgatgttgaatga 29966596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 49680684 - 49680766
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttg 98  Q
    |||||||| |||||||||||| ||||||| | | ||||||| || || | ||||||||||| |||||| ||||| ||||||||    
T  49680684 atatttcggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgttattaacttgaatgttgtgagtttg 49680766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 56040589 - 56040491
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||| | || |||| ||| |||||||||| | |||||||| || || ||||    ||||||||||||| ||||||    
T  56040589 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgctgtgagtttgctcgcagattcaccctttacgtttttagcgatgtt 56040491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 28857566 - 28857667
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||| |||||||| | ||||||  ||||||| ||||||| ||| |||||||  | | ||||||||||| || |||| |  ||||||||||||| ||||||    
T  28857566 atttcatcatattttttgtaggtattttgcccttatatgctattaacttggcagctgtgagtttgttcgcagattcatcctttacgtttttagcgatgtt 28857665  T
Q  134 ga 135  Q
    ||    
T  28857666 ga 28857667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 35261340 - 35261469
Alignment:
Q  18 tatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    ||||||| ||| ||||||||||||| || | | ||||| | || |||  ||||||| ||| |||||||||||| ||||||||||  || |||| |  |||    
T  35261340 tatttcggtcattttaattttatcagatatgtttgtagacattatgcacttatatgctattaacttggatgttgtgagtttgtttgcagattcatccttt 35261439  T
Q  117 acgtttttagtgatgttgaatgaggtactc 146  Q
    ||||||||||   |||||||||| ||||||    
T  35261440 acgtttttagaagtgttgaatgatgtactc 35261469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 43853608 - 43853709
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| |||  || |||||   || |||||||| |||||||||||| ||||||||||| || |||    |||||| ||||||| ||||||    
T  43853608 attttatcatattatttgtcagcattttgttgttgtatgttattaacttggatgttgtgagtttgttcgcagattaaccatttacatttttagcgatgtt 43853707  T
Q  134 ga 135  Q
    ||    
T  43853708 ga 43853709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 2115521 - 2115389
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||| ||||||| | | ||||||| || || | ||||||| ||| |||||||||  | ||||||||||| || |||| |  |||| ||||||    
T  2115521 tcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatactgtgagtttgttcgcagattcatcctttatgttttt 2115422  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| || ||||||    
T  2115421 agcggtgttgaatgatgtaatctctcgatttga 2115389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 9048828 - 9048904
Alignment:
Q  33 aattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||||| ||||||| ||||| | | || || ||| ||||||| |||| |||||||||| ||| ||||    
T  9048828 aattttatcatattatttgtaggcattttgtcgtcatgtgctataaacttgggtgttgtgagtttgtttacagattc 9048904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 22611332 - 22611440
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| || |||| || | ||||||||||| || ||||    ||||    
T  22611332 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatggtattaaattgggtgctgtgagtttgttcgcagattcacccttta 22611431  T
Q  118 cgtttttag 126  Q
    |||||||||    
T  22611432 cgtttttag 22611440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 28514925 - 28514989
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaactt 82  Q
    |||| |||||||||| ||||||||||||||| |||| |  ||||| | ||||||||||| |||||    
T  28514925 tattccgatcactttgattttatcatattatctgtatgtattttgtcgttatatgttattaactt 28514989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 43510345 - 43510453
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||| | || ||||| || ||||||| || | ||||||||||| || ||||    ||||    
T  43510345 tatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgtcattaacttgggtgctgtgagtttgttcgcagattcacccttta 43510444  T
Q  118 cgtttttag 126  Q
    |||||||||    
T  43510445 cgtttttag 43510453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 8e-21; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 157
Target Start/End: Original strand, 32607599 - 32607742
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| ||||||||||||||| ||||||| | | ||||||| || |||||||||||| ||| ||| |||||||| ||||||||||| || |||| |      
T  32607599 gaatattccgatcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacctggatgttgtgagtttgttcgcagattcatcc 32607698  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| | |||||||||| ||| ||| || ||||||    
T  32607699 tttacgtttttagcggtgttgaatgatgtaatctctcgatttga 32607742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 22803163 - 22803285
Alignment:
Q  18 tatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattt 116  Q
    |||| ||||||||||||||||||||| | | | ||||||| || |||| ||||||| ||| |||||||||| | |||||||||||||| |||  |  |||    
T  22803163 tattccgatcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacaaatttatccttt 22803262  T
Q  117 acgtttttagtgatgttgaatga 139  Q
    |||||||||| ||||||||||||    
T  22803263 acgtttttagcgatgttgaatga 22803285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 39917331 - 39917217
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| ||||||| |||||| |||| |  |||||||||||    
T  39917331 tcactttaattttatcatatatttttgtaggcattatgcctttatatgctattaacttggatgttgtgagtttattcacagattcatcctttacgttttt 39917232  T
Q  125 agtgatgttgaatga 139  Q
    || | ||||||||||    
T  39917231 agaggtgttgaatga 39917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 25631468 - 25631327
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| ||||||||||| |||||||||| | ||||||||||| || |||| |  ||    
T  25631468 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgcagattcatcctt 25631369  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||| ||||||| | |||||||||| ||| ||| || ||||||    
T  25631368 tacatttttagcggtgttgaatgatgtaatctctcgatttga 25631327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 12116239 - 12116371
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| |||||||||||  | |||| |  |||||||||||    
T  12116239 tcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcttagattcatcctttacgttttt 12116338  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || |||||||||||| ||| ||| || ||||||    
T  12116339 agcgatgttgaatgatgtaatctctcgatttga 12116371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 50194274 - 50194178
Alignment:
Q  39 atcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    |||||||| | ||||||| ||||||| ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||||||||||||| ||||||||    
T  50194274 atcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcgatgttga 50194178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 3848850 - 3848720
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| ||| ||||||| || ||||  |||||| ||| |||||||||| | ||||||||||| || |||| |  |||||||||||||    
T  3848850 actttaattttatcatatatatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 3848751  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| || ||||||    
T  3848750 cggtgttgaatgatgtaatctctcgatttga 3848720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 40487470 - 40487536
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| ||||||||||| ||||||| |||| |||||||||||    
T  40487470 ttttatcatattatttgtaggcattttgccgttatatgttattaacttgggtgttgtgagtttgttc 40487536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 25162568 - 25162709
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||||||| |  |||| |  ||    
T  25162568 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcggattcatcctt 25162667  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  25162668 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 25162709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 36906263 - 36906395
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  |||||||||||    
T  36906263 tcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctttacgttttt 36906362  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| || ||||||    
T  36906363 agcggtgttgaatgatgtaatctctcgatttga 36906395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 43017035 - 43017131
Alignment:
Q  37 ttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||| ||||||| ||||||| || |||| ||| ||||| | |||| ||||||| ||||||||||| |  ||||||||||||| ||||||    
T  43017035 ttatcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgtttttagcgatgtt 43017131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 4711610 - 4711725
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||  || |||| |  ||||    
T  4711610 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatccttta 4711709  T
Q  118 cgtttttagtgatgtt 133  Q
     |||||||||||||||    
T  4711710 tgtttttagtgatgtt 4711725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 33580025 - 33580123
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||| ||||||| || ||||    ||||||||||||||||||||    
T  33580025 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacgtttttagtgatgtt 33580123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 35175548 - 35175673
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||| |||||||| | ||||||| ||||| |||| |||| ||| ||||||  |||| ||||||||||| || |||| |  ||||||||||||| ||||||    
T  35175548 atttcatcatattgtttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgtt 35175647  T
Q  134 ga--atgaggtactctatcaatttga 157  Q
    ||  |||| ||| |||||||||||||    
T  35175648 gattatgatgtattctatcaatttga 35175673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 23799854 - 23799789
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgt 99  Q
    ||||||||||||||| ||||||| ||||||| || |||||||| ||||||| |||| |||||||||    
T  23799854 attttatcatattatttgtaggcattttgccgttgtatgttattaacttgggtgttgtgagtttgt 23799789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 139
Target Start/End: Complemental strand, 44907343 - 44907218
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || |||||||||||| ||||||| | | ||||||| || || | ||||||| ||| || ||||||||| ||||||||||| || |||| |      
T  44907343 gaatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttgttcgcagattcatcc 44907244  T
Q  114 tttacgtttttagtgatgttgaatga 139  Q
    ||||||||||||| | ||||||||||    
T  44907243 tttacgtttttagcgttgttgaatga 44907218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 46979880 - 46979803
Alignment:
Q  78 aacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaattt 155  Q
    |||||||||||||||||||||||  || |||  |  ||||||||||||||| |||||||| | |||||||||||||||    
T  46979880 aacttggatgttatgagtttgtttgcagattaatcctttacgtttttagtgctgttgaataatgtactctatcaattt 46979803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 19619857 - 19619949
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||||||||||| ||||||| ||||||| || |||| ||| ||||  |||||| |||||||| || || |||| | ||||||||||||||    
T  19619857 attttatcatattatttgtaggcattttgccgttgtatgctattaactaagatgttttgagtttgatcgcagattcatcatttacgtttttag 19619949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 51303587 - 51303491
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgat 130  Q
    |||| |||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||   || |||||||||||||||    
T  51303587 atttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccatatacgtttttagtgat 51303491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 24396416 - 24396317
Alignment:
Q  58 ttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||| || |||| ||| |||||| ||||| || |||||| |||| |||| | ||||| ||||||||  || |||||||| |||||||||||||||||    
T  24396416 ttttgccgttttatgctattaacttgaatgttgtgtgtttgtacacaaattcatcatttaagtttttagcaatattgaatgatgtactctatcaatttga 24396317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 44959933 - 44959854
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagttt 97  Q
    ||||||| | |||| | |||||||||||||| ||||||| |||||||||| |||| ||| |||||||||| | |||||||    
T  44959933 tatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagttt 44959854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 48650694 - 48650611
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| |||||||||||    
T  48650694 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttc 48650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 628863 - 628742
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga-- 135  Q
    ||||||||||| ||||||| ||||||| || |||  ||| ||||||| |||| ||||||||||| || |||| |  ||||||||||||| ||| ||||      
T  628863 tatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgatt 628764  T
Q  136 atgaggtactctatcaatttga 157  Q
     ||| ||| |||||||||||||    
T  628763 ttgatgtattctatcaatttga 628742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 21431741 - 21431855
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||| |||||| || ||||   |||||    
T  21431741 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctgtgagattgttcgcagattcaccattta 21431840  T
Q  118 cgtttttagtgatgt 132  Q
    ||||||||| |||||    
T  21431841 cgtttttagcgatgt 21431855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 35864893 - 35864811
Alignment:
Q  51 gtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||| |||||||||| |||| ||| |||||||||||| |||| |||||| || |||| |  ||||||||||||| ||||||    
T  35864893 gtaggcattttgccattgtatgctattaacttggatgttgtgaggttgttcgcaaattcattttttacgtttttagagatgtt 35864811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 38545944 - 38546042
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || |  |||||||||| || ||||    ||||||||||||||||||||    
T  38545944 ttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtggtgggagtttgttcccagattcaccctttacgtttttagtgatgtt 38546042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 38860055 - 38859989
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| |||||||||||    
T  38860055 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttc 38859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 17237937 - 17238078
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || ||||||||||||||| |||| | | ||||||| || || | ||||||| ||| |||||||||| | ||||||||||| |  |||| |  ||    
T  17237937 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctt 17238036  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| | | |||||||||    
T  17238037 tacgtttttagcggtgttgaatgatgtaatatctcaatttga 17238078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 27856309 - 27856410
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||| |||| || ||  ||| ||| |||||||||| | ||||||||||| || |||| |  ||||||||||||| ||| ||    
T  27856309 attttatcatattatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacgtttttagcgatatt 27856408  T
Q  134 ga 135  Q
    ||    
T  27856409 ga 27856410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 29503593 - 29503714
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||  | ||||| ||||| ||||||| |  ||    
T  29503593 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggattctgtgagtatgttcgcatattcatcctt 29503692  T
Q  116 tacgtttttagtgatgttgaat 137  Q
    ||| ||||||| | ||||||||    
T  29503693 tacatttttagcggtgttgaat 29503714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 46934821 - 46934894
Alignment:
Q  66 ttatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    ||||||| ||| |||||||||||| |||||||||||  | |||| |  ||||||||||||| ||||||||||||    
T  46934821 ttatatgctattaacttggatgttgtgagtttgttcgtagattcatcctttacgtttttagcgatgttgaatga 46934894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 51923871 - 51923944
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatat 107  Q
    |||| |||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| |||||    
T  51923871 atttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatat 51923944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 53807798 - 53807701
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||| || |||| |  ||||||||||||| ||| ||||    
T  53807798 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacgtttttagcgatcttga 53807701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 38854968 - 38854868
Alignment:
Q  27 cactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||||||||| | | ||||| | || | || ||||||||||| |||||||||| | ||||||| ||| ||||||| |  ||||||||||||    
T  38854968 cactttaattttatcatatatttttgtagtcattataccgttatatgttattaacttggatgatgtgagttttttcgcatattcatcctttacgttttta 38854869  T
Q  126 g 126  Q
    |    
T  38854868 g 38854868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 43488533 - 43488445
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttt 123  Q
    |||||||||||||| | ||||||||||||| || |||| ||| || |||| || | ||||||||||| || |||| | |||||||||||    
T  43488533 ttttatcatattatttttaggctttttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcatcatttacgtttt 43488445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 9998595 - 9998678
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  9998595 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 9998678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 10229604 - 10229687
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  10229604 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 10229687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 10233198 - 10233281
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  10233198 tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 10233281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 20987699 - 20987632
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||||||||||| ||||||| ||||||  || |||| ||| |||||||||| | |||||||||||    
T  20987699 attttatcatattatttgtaggcattttgcagttgtatgctattaacttggatgatgtgagtttgttc 20987632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 52923077 - 52922962
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaattta 117  Q
    ||||||| | |||| | |||||||||||||| ||||||| |||| || || |||| ||| ||||||| || | ||||||||||| || ||||    ||||    
T  52923077 tatttcggtgacttaagttttatcatattatttgtaggcattttaccgttgtatgctattaacttggctgctgtgagtttgttcgcagattcacccttta 52922978  T
Q  118 cgtttttagtgatgtt 133  Q
    ||||||||| ||||||    
T  52922977 cgtttttagcgatgtt 52922962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 7792131 - 7792065
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgtt 100  Q
    ||||||||||||||| ||||||| |||||||||| || | ||| ||||| | ||||| |||||||||    
T  7792131 attttatcatattatttgtaggcattttgccattgtaagctattaacttaggtgttaagagtttgtt 7792065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 10108381 - 10108447
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  10108381 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 10108447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 21533752 - 21533686
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  21533752 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 21533686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 32701636 - 32701702
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||| ||||||| ||||||| ||||||| || |||| ||| |||||||||| | |||||||||||    
T  32701636 ttttatgatattatctgtaggcattttgccgttgtatgctatgaacttggatgctgtgagtttgttc 32701702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 40556847 - 40556913
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| || |||| |||  |||||| |||| |||||||||||    
T  40556847 ttttatcatattatttgtaggcattttgccgttgtatgctatgcacttgggtgttgtgagtttgttc 40556913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 45568388 - 45568290
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||| ||| || ||||    ||||||||||||| ||||||    
T  45568388 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgtttttagcgatgtt 45568290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 50611351 - 50611237
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||| ||||||||||||| | | ||||||| || | |  ||||||| ||| |||||||||| |||| |||||||| || |||| |  |||||||||||    
T  50611351 tcacttaaattttatcatatgtttttgtaggcattatacagttatatgctattaacttggatgatatgggtttgttcgcagattcatcctttacgttttt 50611252  T
Q  125 agtgatgttgaatga 139  Q
    || | ||||||||||    
T  50611251 agcggtgttgaatga 50611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 4821946 - 4822051
Alignment:
Q  30 tttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtga 129  Q
    |||||||| |||||||| | ||||||| ||||||  ||||||| ||| ||||||| || | ||||||||||| || |||| |  |||| ||||||||  |    
T  4821946 tttaatttcatcatattttttgtaggcattttgctgttatatgctattaacttgggtgatgtgagtttgttcgcagattcattctttatgtttttagcaa 4822045  T
Q  130 tgttga 135  Q
    ||||||    
T  4822046 tgttga 4822051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 19339319 - 19339415
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgat 130  Q
    ||||||||||||||| ||||||| ||||| | || |||||||| ||||||| |  | | ||||||||| || |||| |  ||||||||| |||||||    
T  19339319 attttatcatattatctgtaggcattttgtcgttgtatgttattaacttgggtactttaagtttgttctcagattcatcttttacgtttgtagtgat 19339415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 49552155 - 49552043
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||| ||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | | ||||||||| || |||| |  |||||||||||||    
T  49552155 actttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgcagattcatcctttacgtttttag 49552056  T
Q  127 tgatgttgaatga 139  Q
       ||||||||||    
T  49552055 cagtgttgaatga 49552043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 42447959 - 42447858
Alignment:
Q  27 cactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| ||||||||||||||||||| |  ||||||||||||    
T  42447959 cactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcacatattcattctttacgttttta 42447860  T
Q  126 gt 127  Q
    ||    
T  42447859 gt 42447858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 11725831 - 11725963
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||| ||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | |||||||||||||| |||| |  |||||||||||    
T  11725831 tcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctttacgttttt 11725930  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| |||||||||    
T  11725931 agcggtgttgaatgatgtaatctctcaatttga 11725963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 139
Target Start/End: Complemental strand, 9498532 - 9498418
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||| ||||||| | | ||||||| || |||||||||||| ||| |||||||||| | |||||||||||||| |||| |  |||||||||||    
T  9498532 tcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacttggatgctgtgagtttgttcacagattcatcctttacgttttt 9498433  T
Q  125 agtgatgttgaatga 139  Q
    || | ||||||||||    
T  9498432 agcggtgttgaatga 9498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 43135512 - 43135400
Alignment:
Q  26 tcactttaattttatcatattatgt-gtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    ||||||||||||||||||||  | | |||||| || |||| ||||||||||| |||||||||||| ||||| ||||| || |||| | ||||||||||||    
T  43135512 tcactttaattttatcatatattttcgtaggcattatgccgttatatgttattaacttggatgttgtgagtatgttcgcaaattcatcatttacgttttt 43135413  T
Q  125 agtgatgttgaat 137  Q
    || | ||||||||    
T  43135412 agcggtgttgaat 43135400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 43192291 - 43192148
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| ||||||||||||||||||||||| | | ||||  | || |||| ||||||| ||| |||||||||||| ||||||||||| || |||| |      
T  43192291 gaatattccgatcactttaattttatcatatatttttgtatccattatgccgttatatgctattaacttggatgttctgagtttgttcgcagattcatcc 43192192  T
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||| |||||||| | |||||||||| ||| ||| || ||||||    
T  43192191 tttatgtttttagcggtgttgaatgatgtaatctctcgatttga 43192148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 16928698 - 16928600
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| |||||||||| |||| ||| ||||||| |||| ||||||||||| || ||||    ||||||||||||| ||||||    
T  16928698 ttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 16928600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 33299005 - 33299135
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | | ||||| || |||| ||||||| ||| ||||| |||||| ||||||||||| || |||| | ||||||  ||||    
T  33299005 tcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcatttacaatttt 33299104  T
Q  125 agtgatgttgaatgaggtactctatcaattt 155  Q
    || | |||||||||| ||| |||||||||||    
T  33299105 aggggtgttgaatgatgtattctatcaattt 33299135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 4809106 - 4809247
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| ||||| |||||| ||||||||||| || |||| |  ||    
T  4809106 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcctt 4809205  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  4809206 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 4809247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 37565821 - 37565681
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || ||||||| |||||||||||| | | ||||||| || |||  ||||||| ||| |||||||||| | ||||||||||| || |||| |  ||    
T  37565821 atattccggtcactttgattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcctt 37565722  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttg 156  Q
    ||||||||||||| |||||||||| ||| ||| || |||||    
T  37565721 tacgtttttagtggtgttgaatgatgtaatctctcgatttg 37565681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 2656012 - 2656135
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || |||  ||||||| ||| |||||||||| | ||||||||||| || |||| | |||    
T  2656012 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcatt 2656111  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| | ||||||||||    
T  2656112 tacgtttttagcggtgttgaatga 2656135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 34611946 - 34612069
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |    ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||    
T  34611946 atattccggtcactttaattttatcatatatttttgtaggcattatcttgttatatgctattaacttggatgttgtgagtttgttcgcagattcattctt 34612045  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    |||||||||||||||||| |||||    
T  34612046 tacgtttttagtgatgttcaatga 34612069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 44099868 - 44099737
Alignment:
Q  27 cactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||||||||| | | |||| || || || | ||||||| ||| |||||||||||| ||||||||||  || |||| |  ||||||||||||    
T  44099868 cactttaattttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgttagcagattcatcctttacgttttta 44099769  T
Q  126 gtgatgttgaatgaggtactctatcaatttga 157  Q
    | | |||||||||| ||| ||| |||||||||    
T  44099768 gcggtgttgaatgatgtaatctctcaatttga 44099737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 9072860 - 9073001
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| |||| |||||||||||||||||| | | |||| || || | || ||||||| ||| |||||||||| | |||||||| ||||| |||| |  ||    
T  9072860 atattccgatgactttaattttatcatatatttttgtatgcattattccgttatatgctattaacttggatgctgtgagtttgctcacagattcattctt 9072959  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  9072960 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 9073001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 11197025 - 11197158
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| |||||||||||||||||| |||| | | ||||||| || |||  ||||||| ||| |||||||||| | |||||||||| ||| |||  | |||    
T  11197025 atattccgatcactttaattttattatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgtttacagatttatcatt 11197124  T
Q  116 tacgtttttagtgatgttgaatgaggtactctat 149  Q
    ||||||||||   ||||||||||| ||| |||||    
T  11197125 tacgtttttaacaatgttgaatgatgtaatctat 11197158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 28239992 - 28240124
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||| | | | |||| || || |||| ||||||  ||| ||||| |||| | |||||||||||||| |||| |  |||||||||||    
T  28239992 tcactttaattttatcatttatttttgtaagcattatgccgttatattctattaacttagatgctgtgagtttgttcacagattcatcctttacgttttt 28240091  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || |||||||||||| |||  ||||| ||||||    
T  28240092 agcgatgttgaatgacgtaacctatcgatttga 28240124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 11464313 - 11464436
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | |||||||||||  | |||| |  ||    
T  11464313 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgtagattcatcctt 11464412  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| | ||||||||||    
T  11464413 tacgtttttagcggtgttgaatga 11464436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 28086754 - 28086655
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||| ||||| | || |||| ||| |||||   |  ||||||||||||||||||||| | || ||||||||||| ||||||    
T  28086754 attttatcatattatttgtaggcattttgtcgttgtatgctattaacttaagtactatgagtttgttcacatattcatcatctacgtttttagcgatgtt 28086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 31013549 - 31013458
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||    |||||||||||||    
T  31013549 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttag 31013458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 36033543 - 36033618
Alignment:
Q  26 tcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||||| | |||||||| || ||||| |  ||||| ||| |||||||| ||||||||||||||||||||||||    
T  36033543 tcactttaactctatcatatcatttgtagccactttgctattgtatgttattaacttggatgttatgagtttgttc 36033618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 45445753 - 45445678
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    ||||||||||||||| ||||||| |||||   || |||| ||| |||||||||||| ||||||||||| |||||||    
T  45445753 attttatcatattatttgtaggcattttgttgttttatgctattaacttggatgttgtgagtttgttcgcatattc 45445678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 7677224 - 7677126
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| |||| || ||||||| || |||||||| ||||||| || | ||| |||||||||| ||||    ||||||||||||| ||||||    
T  7677224 ttttatcatattatttgtaagcattttgccgttgtatgttattaacttgggtgctgtgactttgttcacagattcactctttacgtttttagcgatgtt 7677126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 9637350 - 9637252
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| | ||||| ||||| | || |||| ||| ||||||| ||||||||||||||||  |  |||   |||||||||||||||||||||    
T  9637350 ttttatcatattatttttaggcattttgtcgttgtatgctattaacttgggtgttatgagtttgttcgtagtttcaccatttacgtttttagtgatgtt 9637252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 30568262 - 30568164
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||| |||| ||||||| ||||||| || |||| ||| ||||||| |||| ||||||||||| || ||||    ||||||||||||| ||||||    
T  30568262 ttttatcatgttatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 30568164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 33342585 - 33342683
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttt 123  Q
    |||||||||||||||||||| ||| ||||||| || |||| ||||||| ||| |||||| ||| | ||||||||||| || |||| | |||||| ||||    
T  33342585 tcactttaattttatcatatatatttgtaggcattatgccgttatatgctattaacttgaatgctgtgagtttgttcgcagattcatcatttacatttt 33342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 136
Target Start/End: Complemental strand, 41060205 - 41060103
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||| | |||||   || |||| |||||| |||| || | ||||||||||| || |||| |  ||||||||||||||||||||    
T  41060205 attttatcatattatttgtagccattttgttgttgtatgctatcaatttgggtgatgtgagtttgttcgcagattcatcctttacgtttttagtgatgtt 41060106  T
Q  134 gaa 136  Q
    |||    
T  41060105 gaa 41060103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 9619299 - 9619158
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | |||| |  || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  ||    
T  9619299 atattccggtcactttaatttcatcatatatttttgtaagtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 9619200  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| | | |||||||||    
T  9619199 tacgtttttagcggtgttgaatgatgtaatatctcaatttga 9619158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 11267162 - 11267291
Alignment:
Q  29 ctttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagt 127  Q
    ||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| ||  ||| |  |||||||||||||     
T  11267162 ctttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagtttcatcctttacgtttttagc 11267261  T
Q  128 gatgttgaatgaggtactctatcaatttga 157  Q
    | ||| |||||| ||| ||| || ||||||    
T  11267262 ggtgtcgaatgatgtaatctctcgatttga 11267291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 14906865 - 14906724
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || ||   ||||||| ||| |||||||||  | ||||||||||| || |||| |  ||    
T  14906865 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatcctgtgagtttgttcgcagattcatcctt 14906766  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  14906765 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 14906724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 23851436 - 23851295
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| | |||||||||| ||||||| | | ||||||| || || | ||||||| ||| ||||| |||||| ||||||||||| || |||  |  ||    
T  23851436 atatttcggtaactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttagatgttgtgagtttgttcgcagatttatcttt 23851337  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||| ||||||||| |||||||||| ||| ||| || ||||||    
T  23851336 tacttttttagtggtgttgaatgatgtaatctctcgatttga 23851295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 40619021 - 40618916
Alignment:
Q  28 actttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagt 127  Q
    |||| ||||||||||||||||||||| || ||||||| || |||| ||| |||||||  ||| || |||||||| || ||    |||||||||||||||     
T  40619021 acttaaattttatcatattatgtgtatgcattttgccgttgtatgctattaacttgggggttgtgcgtttgttcgcagatctacaatttacgtttttagc 40618922  T
Q  128 gatgtt 133  Q
    ||||||    
T  40618921 gatgtt 40618916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 19876402 - 19876481
Alignment:
Q  78 aacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||| | ||||| |||||||| |||| |  ||||||||||||| | |||||||||| ||| ||| |||||||||    
T  19876402 aacttggatgctgtgagtatgttcacagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttga 19876481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 27110407 - 27110308
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||| | ||||  | || |||| ||| ||||||| |||| ||||||||||| ||||||| |  ||| | ||||||||||||||    
T  27110407 attttatcatattatttgtagacattttatcgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcttttgcatttttagtgatgtt 27110308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 29777411 - 29777502
Alignment:
Q  66 ttatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||| ||| |||||||||| | ||||||||||| || |||| |  ||||||||||||| | |||||||||| ||| ||| || ||||||    
T  29777411 ttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttga 29777502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 33347461 - 33347362
Alignment:
Q  36 tttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    ||||||||||||| ||||||| ||||| |||| |||| ||| || || | |||||||||||||||| || ||||    ||||| ||||||| ||||||||    
T  33347461 tttatcatattatttgtaggcattttgtcattgtatgctattaaattaggtgttatgagtttgttcgcagattcaccttttacctttttagcgatgttga 33347362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 4757482 - 4757532
Alignment:
Q  59 tttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||| || |||||||| ||| |||||||| |||||||||||||||||||    
T  4757482 tttgccgttttatgttattaacatggatgttgtgagtttgttcacatattc 4757532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 7883182 - 7883084
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||  ||| ||||||| || | ||||||||||| || ||||    ||||||||||||| ||||||    
T  7883182 ttttatcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 7883084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 23230791 - 23230857
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||| | || |||| ||| ||||||| |||| |||||||||||    
T  23230791 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttc 23230857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 24099167 - 24099097
Alignment:
Q  65 attatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttga 135  Q
    |||||||| ||| |||||||||||| ||||||||||| || ||||    ||||||||||||| ||||||||    
T  24099167 attatatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgttga 24099097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 27498308 - 27498242
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgtt 100  Q
    ||||||||||||||| | ||| | ||||| | ||||||||||| ||||||| ||||||||| |||||    
T  27498308 attttatcatattatttatagacattttgtctttatatgttatgaacttgggtgttatgagcttgtt 27498242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 28897841 - 28897923
Alignment:
Q  19 atttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||| ||||  ||||||||||||||| ||||| | ||||| |||| |||| ||| ||| ||| |||| |||||||||||    
T  28897841 atttcgatgacttagattttatcatattatttgtagtcattttgtcattctatgctattaacgtgggtgttgtgagtttgttc 28897923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 37971431 - 37971497
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||| ||||| ||||||| ||||||| || |||| ||| ||||||| |||| |||||||||||    
T  37971431 ttttatcacattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttc 37971497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 39153084 - 39152943
Alignment:
Q  18 tatttcgatcactttaattttatcatat--tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||| |||||||||||||||||||||||  | | ||||||| || ||   |||| || ||| ||||| ||||||| |||||||||| || |||| |  ||    
T  39153084 tattccgatcactttaattttatcatatattttttgtaggcattatgttgttatgtgctattaacttagatgttaagagtttgttcgcagattcatcctt 39152985  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||||   |||||||| | ||||| |||| ||||||    
T  39152984 tacgtttttagcagtgttgaataatgtactttatcgatttga 39152943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 17693572 - 17693491
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggc-tttttgccattatatgttatcaacttggatgttatgagtttg 98  Q
    ||||||||| ||||   |||||||||||||| ||||||| ||||||   || |||||||| |||||||||||| ||||||||    
T  17693572 tatttcgatgacttatgttttatcatattatttgtaggcatttttgttgttgtatgttattaacttggatgttgtgagtttg 17693491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 25238535 - 25238430
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| | ||| | ||||||| || |||||||| |||||| ||||| | || ||||||| |  ||  | ||||||||||| |||||| ||    
T  25238535 attttatcatattatttatagacattttgccgttgtatgttataaacttgaatgttgtaaggttgttcatagttttatcatttacgttttcagtgatttt 25238436  T
Q  134 gaatga 139  Q
    ||||||    
T  25238435 gaatga 25238430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 43833937 - 43833872
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgtt 100  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||    
T  43833937 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtt 43833872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 15344459 - 15344547
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||||||| ||||||| ||||| | || |||| ||| ||||||| || | ||||||||||| || |||| |  |||||||||||||    
T  15344459 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 15344547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 15433524 - 15433612
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||||||| ||||||| ||||| | || |||| ||| ||||||| || | ||||||||||| || |||| |  |||||||||||||    
T  15433524 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 15433612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 15524828 - 15524916
Alignment:
Q  38 tatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||||||| ||||||| ||||| | || |||| ||| ||||||| || | ||||||||||| || |||| |  |||||||||||||    
T  15524828 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttag 15524916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 17334897 - 17335029
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| ||||||||||| || |||| | ||||||||||||    
T  17334897 tcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgttttt 17334996  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || | |||||||||| ||| ||| || ||||||    
T  17334997 agcggtgttgaatgatgtaatctctcgatttga 17335029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 157
Target Start/End: Complemental strand, 28635046 - 28634914
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||| | | | ||||||| || |||| |||||||  || |||||||||||| |||||||||||||| |||| |  |||||||||||    
T  28635046 tcactttaattttatcatgtatttttgtaggcattatgccgttatatgcgattaacttggatgttgtgagtttgttcacagattcatcctttacgttttt 28634947  T
Q  125 agtgatgttgaatgaggtactctatcaatttga 157  Q
    || |||||||||||| |||  ||||| ||||||    
T  28634946 agcgatgttgaatgatgtaacctatcgatttga 28634914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 35001723 - 35001848
Alignment:
Q  15 gaatatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaa 113  Q
    ||||||| || | |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| ||||||||||| || |||  |      
T  35001723 gaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattaatcc 35001822  T
Q  114 tttacgtttttagtgatgttgaatga 139  Q
    ||||||||||||| ||||||||||||    
T  35001823 tttacgtttttagcgatgttgaatga 35001848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 4088595 - 4088736
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || |||| |||||||  || |||||||||| | ||||||||||| || |||| |  ||    
T  4088595 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgccattaacttggatgctgtgagtttgttcgcagattcatcctt 4088694  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | ||||||||||  || ||| |||||||||    
T  4088695 tacgtttttagcggtgttgaatgaaataatctctcaatttga 4088736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 16892758 - 16892617
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||||  | ||||||||| || | || | |||    
T  16892758 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgtcgtaagtttgttcgcagaatcatcatt 16892659  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||||| |||||||||| ||| ||| || ||||||    
T  16892658 tacgtttttagtggtgttgaatgatgtaatctctcgatttga 16892617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 17237228 - 17237087
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||| ||||| || |||| |  ||    
T  17237228 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtgtgttcgcagattcatcctt 17237129  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  17237128 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 17237087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 8028051 - 8027939
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    |||||||||||||||||||| | | ||||||| || |||||||||||| ||| ||||| |||| | ||||||||||| || |||| |  |||||||||||    
T  8028051 tcactttaattttatcatatatttttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttcgcaaattcatcctttacgttttt 8027952  T
Q  125 agtgatgttgaat 137  Q
    || | ||||||||    
T  8027951 agcggtgttgaat 8027939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 8497102 - 8497244
Alignment:
Q  17 atatttcgatcactttaattttatcatat--tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaat 114  Q
    ||||| || |||||||||||| |||||||  | | ||||||| || |||| ||||||| ||| |||||||||| | ||||||||||| || |||| |  |    
T  8497102 atattccggtcactttaatttcatcatatattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcct 8497201  T
Q  115 ttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||||| | |||||||||| ||| ||| || ||||||    
T  8497202 ttacgtttttagcggtgttgaatgatgtaatctctcgatttga 8497244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 12059715 - 12059592
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgt-gtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || ||||||||||||||||||||| | | |||||  || || | ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||    
T  12059715 atattccggtcactttaattttatcatatttttttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 12059616  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| | ||||||||||    
T  12059615 tacgtttttagcggtgttgaatga 12059592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 157
Target Start/End: Original strand, 25064381 - 25064512
Alignment:
Q  27 cactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||| ||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||||||| || |||| |  ||||||||||||    
T  25064381 cactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 25064480  T
Q  126 gtgatgttgaatgaggtactctatcaatttga 157  Q
    | | |||||||||| ||| ||| || ||||||    
T  25064481 gcggtgttgaatgatgtaatctctcgatttga 25064512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 33053111 - 33053020
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| |||||||||| | ||||||||||| |||||||    |||||||||||||    
T  33053111 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacgtttttag 33053020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 3913517 - 3913451
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| |||||||||| |||| ||| ||||||| |||| |||||||||||    
T  3913517 ttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttc 3913451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 157
Target Start/End: Original strand, 16419304 - 16419434
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| | ||||| ||| ||||||  |||| ||||||||||| || |||| |  |||||||||||||    
T  16419304 actttaattttatcatatatttttgtaggcattatgccgtcatatgctattaacttgattgttgtgagtttgttcgcagattcatcttttacgtttttag 16419403  T
Q  127 tgatgttgaatgaggtactctatcaatttga 157  Q
     | |||||||||| ||| ||| |||||||||    
T  16419404 cggtgttgaatgatgtaatctctcaatttga 16419434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 7881044 - 7880903
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||| ||||||| | | ||||||| || |||| ||||||| ||| |||||||||| | ||| ||||||| || |||| |  ||    
T  7881044 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgactttgttcgcagattcattctt 7880945  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  7880944 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 7880903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 606334 - 606417
Alignment:
Q  18 tatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||| | |||| | |||||||||||||| ||||||| |||||||||| |||| ||| ||||||| || | |||||||||||    
T  606334 tatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttc 606417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7875986 - 7875863
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| ||||||||||||||| ||||||| | | ||||||| || |||  ||||||| ||| |||||||||| | ||| ||||||| || |||| |  ||    
T  7875986 atattccgatcactttaatttcatcatatatttttgtaggcattatgcagttatatgctattaacttggatgctgtgactttgttcgcagattcattctt 7875887  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    ||||||||||| | ||||||||||    
T  7875886 tacgtttttagcggtgttgaatga 7875863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 12653091 - 12653202
Alignment:
Q  29 ctttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagt 127  Q
    ||||||||||||||||| | | |||| || || |||| ||||||| ||| |||||||||||| ||||||||||| || |||| |  | |||||||||||     
T  12653091 ctttaattttatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctgtacgtttttagc 12653190  T
Q  128 gatgttgaatga 139  Q
    | ||||||||||    
T  12653191 ggtgttgaatga 12653202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 33740520 - 33740397
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    |||||||| |||||||||||||||||||| | | | ||||| || |||| ||||||| ||| |||||||||  | ||||||||||| || |||| |  ||    
T  33740520 atatttcggtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctt 33740421  T
Q  116 tacgtttttagtgatgttgaatga 139  Q
    |||||||||||   ||||||||||    
T  33740420 tacgtttttagcagtgttgaatga 33740397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 20225999 - 20226097
Alignment:
Q  36 tttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttg 134  Q
    ||||||||||||| ||||||| ||||| | || |||| ||| ||||||| | || ||||||||||| || |||| | ||||| |||||||| |||||||    
T  20225999 tttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 20226097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 22119983 - 22120081
Alignment:
Q  36 tttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttg 134  Q
    ||||||||||||| ||||||| ||||| | || |||| ||| ||||||| | || ||||||||||| || |||| | ||||| |||||||| |||||||    
T  22119983 tttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 22120081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 4984509 - 4984368
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| ||||||||||||||||||||||| | | ||||||| || ||   ||||||| ||| ||||| |||| | | ||||||||| || |||| |  ||    
T  4984509 atattccgatcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttagatgatgtaagtttgttcgcagattcatcctt 4984410  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| ||| || ||||||    
T  4984409 tacgtttttagcggtgttgaatgatgtaatctctcgatttga 4984368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 23947243 - 23947118
Alignment:
Q  33 aattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatg 131  Q
    ||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||||| |||||||||||  | |||| |  ||||||||||||| |  |    
T  23947243 aattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgtagattcatcctttacgtttttagcggcg 23947144  T
Q  132 ttgaatgaggtactctatcaatttga 157  Q
    |||||||| ||| ||| || ||||||    
T  23947143 ttgaatgatgtaatctctcgatttga 23947118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 17346435 - 17346375
Alignment:
Q  77 caacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaat 137  Q
    ||||||||||||| ||| ||||||||||||||| |  ||||||||||||| ||||| ||||    
T  17346435 caacttggatgttgtgaatttgttcacatattcatcttttacgtttttagcgatgtagaat 17346375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 33110746 - 33110854
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| || || | ||||||| ||| |||||||||||| ||||||| ||  ||||||| |  ||    
T  33110746 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttatttgcatattcatcctt 33110845  T
Q  116 tacgttttt 124  Q
    |||||||||    
T  33110846 tacgttttt 33110854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 14801973 - 14802040
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||| |||||||||| ||||||| ||||||| || |||| ||| |||||||||| | |||||||||||    
T  14801973 atttcatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttc 14802040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 30608459 - 30608368
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttta 125  Q
    ||||||||||||||| ||||||| |||| || || |||| ||| |||||||||||| |||| |||||  || |||| |  ||||||||||||    
T  30608459 attttatcatattatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacgttttta 30608368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 30879666 - 30879595
Alignment:
Q  30 tttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    ||||||||||||||||||| | | ||  ||||| | ||||||||||| |||||||||| | |||||||||||    
T  30879666 tttaattttatcatattatttattggtattttgtcgttatatgttattaacttggatgatgtgagtttgttc 30879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 31296966 - 31297091
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||| | ||||||| ||||| | || |||| ||| || ||||||| | ||||||||||| ||| |||    ||||||||||||| ||||||    
T  31296966 attttatcatattgtttgtaggcattttgtcgttgtatgctattaatttggatgatttgagtttgttcgcattttcaccctttacgtttttagcgatgtt 31297065  T
Q  134 ga--atgaggtactctatcaatttga 157  Q
    ||   ||| ||| |||||||||||||    
T  31297066 gattctgatgtattctatcaatttga 31297091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 127815 - 127905
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    ||||||||||||||| ||||||| ||||||| |  | || ||| ||||||| || | |||||||||||||||||||    |||||||||||||    
T  127815 attttatcatattatttgtaggcattttgccgt--tgtgctattaacttggttgctgtgagtttgttcacatattcaccttttacgtttttag 127905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 546177 - 546278
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||| |||||||||| ||||||| ||||||| || |||| ||| ||||||| || | ||||||||||| || |||| |  | ||||||||||| ||| ||    
T  546177 atttcatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacgtttttagcgatatt 546276  T
Q  134 ga 135  Q
    ||    
T  546277 ga 546278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 8266863 - 8266908
Alignment:
Q  114 tttacgtttttagtgatgttgaatgaggtactctatcaatttgatc 159  Q
    |||| |||||||| || ||||||||| |||||||||||||||||||    
T  8266863 tttatgtttttagcgaagttgaatgatgtactctatcaatttgatc 8266908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 30776809 - 30776910
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||||| ||||||| ||||||| |   ||| ||| ||||||| |||| ||||||||||| || ||||    ||||||||||||| ||| ||    
T  30776809 attttatcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatatt 30776908  T
Q  134 ga 135  Q
    ||    
T  30776909 ga 30776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 10228825 - 10228937
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||  | | ||||||||| || |||| |  ||||||||||||     
T  10228825 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacgtttttaa 10228924  T
Q  127 tgatgttgaatga 139  Q
     | ||||||||||    
T  10228925 cggtgttgaatga 10228937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 32327160 - 32327065
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| |||||||    |||| ||| ||||||| || | ||||||||||| |||||||    ||||||||||||| ||||||    
T  32327160 ttttatcatattatttgtaggcattttgcc---gtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatgtt 32327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 1916 - 1818
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||  || |||||||| ||||||| |||||||||||||||| || ||||    ||||||||||||| ||||||    
T  1916 ttttatcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttagcgatgtt 1818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 1490 - 1588
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| |||||||||||| ||||||||||  || ||||    ||||||||||||| ||||||    
T  1490 ttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 7862 - 7935
Alignment:
Q  36 tttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    ||||||||||||| ||||||  |||||| ||| |||||||| ||||||| |||| ||||||||||| |||||||    
T  7862 tttatcatattatttgtagggattttgctattgtatgttattaacttgggtgttgtgagtttgttcgcatattc 7935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 201315 - 201174
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || |||||||||||||||||||| | | ||||||| |  |||| ||||||| ||| || ||||||  | ||||| |||||||| |||| |  ||    
T  201315 atattccggtcactttaattttatcatatatttttgtaggcatcatgccgttatatgctattaaattggattctgtgagtatgttcacaaattcatcctt 201216  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||| ||||||||| |||||||||| ||| |||||| ||||||    
T  201215 tacatttttagtggtgttgaatgatgtaatctatcgatttga 201174  T

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Target: scaffold0113 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 36535 - 36491
Alignment:
Q  113 atttacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  36535 atttacgtttttagcgatgttgaatgaagtactctatcaatttga 36491  T

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Target: scaffold0088 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 50904 - 50988
Alignment:
Q  17 atatttcgatcactttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||| | |||| | |||||||||||||| ||||||| |||||||||| |||| ||| ||||||| || | |||||||||||    
T  50904 atatttcggtgacttaagttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttc 50988  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 361732 - 361604
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgttttt 124  Q
    ||||||||||||| |||||| | | ||||||| || |||| ||||||||| | |||||||||||| ||||| ||||| || |||  |  |||||||||||    
T  361732 tcactttaattttctcatatatttttgtaggcattatgccgttatatgttgttaacttggatgttgtgagtgtgttcgcagatttatcctttacgttttt 361633  T
Q  125 agtgatgttgaatgaggtactctatcaat 153  Q
    || | |||||||||| ||| ||| |||||    
T  361632 agcggtgttgaatgatgtaatctctcaat 361604  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 58032 - 57933
Alignment:
Q  34 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    |||| |||||||| | ||||||| ||||||| ||||||| ||| |||||||||| | ||||||||||| || |||  |  ||||||||||||| ||||||    
T  58032 atttcatcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacgtttttagcgatgtt 57933  T

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Target: scaffold0127 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 15638 - 15704
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| ||||||| ||| ||||||| || | |||||||||||    
T  15638 ttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttc 15704  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 53345 - 53219
Alignment:
Q  31 ttaattttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgat 130  Q
    |||||||||||||||||| || || | ||||| || | |||| ||| || ||||| ||| | |||||||||  | |||  |  |||| ||||||||||||    
T  53345 ttaattttatcatattatatgcagacattttgtcactgtatgctattaaattggaggttgttagtttgttcgtagatttatcttttatgtttttagtgat 53246  T
Q  131 gttgaatgaggtactctatcaatttga 157  Q
    ||||||||| ||||| |||||||||||    
T  53245 gttgaatgatgtactatatcaatttga 53219  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 83333 - 83256
Alignment:
Q  61 tgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgttgaatga 139  Q
    |||| ||||||| ||| |||||||||||| ||||||||||| || |||| | |||||||||||||| ||| ||||||||    
T  83333 tgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttttagcgat-ttgaatga 83256  T

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Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 14813 - 14716
Alignment:
Q  36 tttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttagtgatgtt 133  Q
    ||||||||||||| |||| || |||||| |||||||| ||| ||||||| || | ||||||||||| || |||| |  ||||  ||||||||||||||    
T  14813 tttatcatattatttgtatgcattttgctattatatgctattaacttgggtgctgtgagtttgttcgcaaattcatcctttatatttttagtgatgtt 14716  T

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Target: scaffold0146 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 16262 - 16121
Alignment:
Q  17 atatttcgatcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatt 115  Q
    ||||| || ||||||||||||||| |||| | | ||||||| || || | ||||||| ||| |||||||||| | ||||||||||| |  |||| |  ||    
T  16262 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctt 16163  T
Q  116 tacgtttttagtgatgttgaatgaggtactctatcaatttga 157  Q
    ||||||||||| | |||||||||| ||| | | |||||||||    
T  16162 tacgtttttagcggtgttgaatgatgtaatatctcaatttga 16121  T

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Target: scaffold0311 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 8835 - 8919
Alignment:
Q  26 tcactttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattc 109  Q
    |||||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||  |  ||||||||||||||||||    
T  8835 tcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgcgagtttgttcacatattc 8919  T

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Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 65985 - 65919
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||| | || |||| ||| ||||||  ||||||||||||||||    
T  65985 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgagtgttatgagtttgttc 65919  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 71813 - 71747
Alignment:
Q  35 ttttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 101  Q
    |||||||||||||| ||||||| ||||||| || |||| ||| ||||||| || | |||||||||||    
T  71813 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 71747  T

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Target: scaffold0495 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 5544 - 5656
Alignment:
Q  28 actttaattttatcatat-tatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttcacatattcgtaatttacgtttttag 126  Q
    |||||||||||||||||| | | ||||||| || |||| ||||||| ||| |||||||||  | | ||||||||| || |||| |  ||||||||||||     
T  5544 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtaagtttgttcgcaaattcatcctttacgtttttaa 5643  T
Q  127 tgatgttgaatga 139  Q
     | ||||||||||    
T  5644 cggtgttgaatga 5656  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 34714 - 34678
Alignment:
Q  26 tcactttaattttatcatattatgtgtaggctttttg 62  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  34714 tcactttaattttatcatattatttgtaggcattttg 34678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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