View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18788_high_3 (Length: 381)
Name: NF18788_high_3
Description: NF18788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18788_high_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 360; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 9074161 - 9073798
Alignment:
| Q |
18 |
atcaggttgctcaccacctcgttttgcatcacaaattggttcattgaatagtaataaccaacaaaaagggaaaggacttagtccacttcatagagtattt |
117 |
Q |
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| T |
9074161 |
atcaggttgttcaccacctcgttttgcatcacaaattggttcattgaatagtaataaccaacaaaaagggaaaggacttagtccacttcatagagtattt |
9074062 |
T |
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| Q |
118 |
aattcaccaaataatcaatatatgcaacatgttgagaatctttcattgccagctattgaagagttcttggaagattttcaaggtgatgttgatcattttt |
217 |
Q |
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| T |
9074061 |
aattcaccaaataatcaatatatgcaacatgttgagaatctttcattgccagctattgaagagttcttggaagattttcaaggtgatgttgatcattttt |
9073962 |
T |
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| Q |
218 |
catcaacaaaggtttcttctgaatgttttgacatggaaactccaatatcaacaattttggatagtttaacaatgcaaaattcttcaagctatggtgcttc |
317 |
Q |
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| T |
9073961 |
catcaacaaaggtttcttctgaatgttttgacatggaaactccaatatcaacaattttggatagtttaacaatgcaaaattcttcaagctatggtgcttc |
9073862 |
T |
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| Q |
318 |
tgttaatgaagaatccactcttttacatggtggtaattcttcttctcaaatttctcaagagagt |
381 |
Q |
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| T |
9073861 |
tgttaatgaagaatccactcttttacatggtggtaattcttcttctcaaatttctcaagagagt |
9073798 |
T |
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