View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18788_high_9 (Length: 236)
Name: NF18788_high_9
Description: NF18788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18788_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4884989 - 4884857
Alignment:
| Q |
1 |
tcatttctttgttcattgtcaacatgggttctgttttgttcttgtttatgttaattcttccattggtttataatgttgctgctgattgttctaatggagc |
100 |
Q |
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| T |
4884989 |
tcatttctttgttcgttgtcaacatgggttctgttttgttcttgattatgttaattcttccattggtttataatgttgctgctgattgttctaatggagc |
4884890 |
T |
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| Q |
101 |
ttgcaaggtatgtatttttaca-taatacaaca |
132 |
Q |
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||||||||||||||| |||||| |||||||||| |
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| T |
4884889 |
ttgcaaggtatgtatctttacattaatacaaca |
4884857 |
T |
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