View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1878_low_7 (Length: 418)
Name: NF1878_low_7
Description: NF1878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1878_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 25 - 404
Target Start/End: Original strand, 41404205 - 41404584
Alignment:
| Q |
25 |
agtcaaaagaccttcaatcgtgtggctgcaatgaaatgatgtgtatgaaagtaggaatcagaccctataagacatgtttgatagattacgagtcaattag |
124 |
Q |
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| T |
41404205 |
agtcaaaagaccttcaatcgtgtggctgcaatgaaatgatgtgtatgaaagtaggaatcagaccctataagacatgtttgatagattacgagtcaattag |
41404304 |
T |
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| Q |
125 |
agtcatttttggcatgtgctctactcgcaagcaattgtgttccttgacttccttctaagtcgattgaacagaaaccatatgaaatatgtgcatgccaaag |
224 |
Q |
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| T |
41404305 |
agtcatttttggcatgtgctctactcgcaagcaattgtgttccttgacttccttctaagtcgattgaacagaaaccatatgaaatatgtgcatgccaaag |
41404404 |
T |
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| Q |
225 |
gtccaatgtgatgttcgtgaagatttaaggttgtgattgtgatatatgtttacgtgaactgtctctggtcagataaactatgagaaggaatgaatgcatc |
324 |
Q |
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| T |
41404405 |
gtccaatgtgatgttcgtgaagatttaaggttgtgattgtggtatatgtttacgtgaaccgtctctggtcagataaactatgagaaggaatgaatgcatc |
41404504 |
T |
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| Q |
325 |
ttcaaaagacttctctaataaaaattgagggagtatttttggttcgttatacaagttgtgtggacttccaaaattcgagt |
404 |
Q |
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| T |
41404505 |
ttcaaaagacttctctaataaaaattgagggagtatttttggttggttatacaaattgtgtggacttccaaaattcgagt |
41404584 |
T |
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