View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18790_low_23 (Length: 245)

Name: NF18790_low_23
Description: NF18790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18790_low_23
NF18790_low_23
[»] chr8 (44 HSPs)
chr8 (4-135)||(42266724-42266855)
chr8 (1-134)||(22206970-22207103)
chr8 (2-135)||(39695743-39695876)
chr8 (1-135)||(20179658-20179793)
chr8 (1-135)||(22259490-22259625)
chr8 (1-135)||(19127744-19127879)
chr8 (1-127)||(22244199-22244325)
chr8 (1-125)||(31723875-31723999)
chr8 (1-127)||(36728455-36728581)
chr8 (1-135)||(5083455-5083590)
chr8 (1-107)||(20084680-20084786)
chr8 (1-105)||(23888542-23888646)
chr8 (1-127)||(23947074-23947200)
chr8 (1-135)||(41681789-41681924)
chr8 (1-127)||(17908060-17908186)
chr8 (1-105)||(23418165-23418269)
chr8 (59-135)||(38550510-38550586)
chr8 (1-135)||(20983120-20983255)
chr8 (1-135)||(29763938-29764073)
chr8 (1-135)||(39833477-39833612)
chr8 (1-127)||(17217381-17217507)
chr8 (1-128)||(21580344-21580473)
chr8 (59-135)||(1323602-1323678)
chr8 (59-135)||(13428567-13428643)
chr8 (63-135)||(27472811-27472883)
chr8 (1-135)||(23669208-23669343)
chr8 (56-135)||(26219358-26219437)
chr8 (1-105)||(13665592-13665696)
chr8 (1-105)||(13724867-13724971)
chr8 (1-135)||(18302979-18303114)
chr8 (59-135)||(20046624-20046700)
chr8 (56-135)||(26225733-26225812)
chr8 (25-127)||(2717947-2718049)
chr8 (60-124)||(22319141-22319205)
chr8 (25-124)||(4381951-4382050)
chr8 (1-127)||(20025379-20025505)
chr8 (1-127)||(22584862-22584988)
chr8 (1-68)||(9042-9109)
chr8 (1-50)||(19929948-19929997)
chr8 (1-47)||(5760256-5760302)
chr8 (1-39)||(19698951-19698989)
chr8 (26-127)||(18820199-18820300)
chr8 (1-50)||(42819077-42819126)
chr8 (1-37)||(25849567-25849603)
[»] chr3 (63 HSPs)
chr3 (1-135)||(45531748-45531882)
chr3 (1-135)||(42327446-42327580)
chr3 (1-135)||(19569448-19569582)
chr3 (1-135)||(53647002-53647137)
chr3 (1-135)||(16728079-16728213)
chr3 (1-135)||(9644247-9644375)
chr3 (1-135)||(14507657-14507792)
chr3 (1-135)||(22307766-22307901)
chr3 (1-135)||(12506805-12506938)
chr3 (1-135)||(14642676-14642811)
chr3 (1-135)||(41173483-41173618)
chr3 (1-135)||(37037646-37037781)
chr3 (1-134)||(17043850-17043984)
chr3 (1-135)||(14153553-14153688)
chr3 (1-135)||(50349186-50349321)
chr3 (1-127)||(6145823-6145949)
chr3 (1-127)||(20416916-20417042)
chr3 (1-121)||(15017461-15017582)
chr3 (1-135)||(6158188-6158323)
chr3 (8-127)||(16049612-16049731)
chr3 (1-135)||(49390163-49390298)
chr3 (11-127)||(16044136-16044252)
chr3 (11-127)||(16058995-16059111)
chr3 (1-135)||(12269075-12269210)
chr3 (1-135)||(18440342-18440477)
chr3 (1-135)||(19485416-19485551)
chr3 (25-127)||(11191723-11191825)
chr3 (53-135)||(12512999-12513081)
chr3 (25-135)||(35065812-35065922)
chr3 (26-127)||(16180138-16180239)
chr3 (59-135)||(6469603-6469679)
chr3 (1-69)||(8492610-8492678)
chr3 (25-127)||(11562311-11562413)
chr3 (59-135)||(21618080-21618157)
chr3 (59-135)||(15076409-15076485)
chr3 (59-135)||(28849083-28849159)
chr3 (59-135)||(45578295-45578371)
chr3 (1-105)||(46751768-46751872)
chr3 (8-127)||(17669009-17669128)
chr3 (60-134)||(23431324-23431398)
chr3 (59-135)||(36166186-36166263)
chr3 (59-135)||(15977117-15977193)
chr3 (1-68)||(11886922-11886989)
chr3 (44-127)||(13179128-13179211)
chr3 (1-95)||(19574777-19574872)
chr3 (25-127)||(17206920-17207022)
chr3 (47-127)||(24556916-24556996)
chr3 (1-50)||(2842631-2842680)
chr3 (1-50)||(5214757-5214806)
chr3 (1-50)||(10542984-10543033)
chr3 (1-50)||(10562513-10562562)
chr3 (1-50)||(18700839-18700888)
chr3 (94-135)||(19574704-19574745)
chr3 (54-127)||(24545436-24545509)
chr3 (1-50)||(35353395-35353444)
chr3 (1-50)||(43890149-43890198)
chr3 (1-50)||(44269434-44269483)
chr3 (57-105)||(1465980-1466028)
chr3 (47-127)||(24553866-24553946)
chr3 (1-50)||(14441134-14441183)
chr3 (58-127)||(15024753-15024822)
chr3 (1-50)||(42353649-42353698)
chr3 (52-103)||(54331588-54331639)
[»] chr2 (36 HSPs)
chr2 (1-135)||(18389425-18389559)
chr2 (1-135)||(10897793-10897927)
chr2 (1-135)||(25085203-25085338)
chr2 (1-135)||(5032528-5032663)
chr2 (1-135)||(24782069-24782201)
chr2 (1-135)||(356791-356926)
chr2 (25-127)||(10744111-10744213)
chr2 (1-135)||(19357737-19357870)
chr2 (25-127)||(25140704-25140806)
chr2 (1-127)||(27851377-27851503)
chr2 (5-127)||(27860092-27860214)
chr2 (1-135)||(9974678-9974813)
chr2 (1-135)||(22500636-22500771)
chr2 (1-135)||(22508570-22508705)
chr2 (1-135)||(24883215-24883350)
chr2 (1-107)||(14693043-14693149)
chr2 (1-105)||(5984949-5985053)
chr2 (1-127)||(22689442-22689568)
chr2 (59-135)||(28576745-28576821)
chr2 (25-127)||(22258705-22258807)
chr2 (1-105)||(27039316-27039421)
chr2 (47-127)||(18391478-18391558)
chr2 (64-135)||(45030318-45030389)
chr2 (25-127)||(44071298-44071400)
chr2 (25-132)||(1384905-1385012)
chr2 (60-127)||(3538549-3538616)
chr2 (8-127)||(21367584-21367703)
chr2 (56-135)||(22688476-22688555)
chr2 (1-50)||(17306312-17306361)
chr2 (2-50)||(28653681-28653729)
chr2 (1-103)||(21336867-21336969)
chr2 (1-105)||(25044825-25044929)
chr2 (1-105)||(24835167-24835271)
chr2 (1-105)||(24815804-24815908)
chr2 (1-31)||(26896168-26896198)
chr2 (4-103)||(21316880-21316979)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-135)||(47654-47788)
scaffold0042 (1-105)||(28097-28201)
[»] chr7 (62 HSPs)
chr7 (1-135)||(13699844-13699978)
chr7 (1-135)||(47093918-47094052)
chr7 (1-135)||(44373726-44373861)
chr7 (1-135)||(44382591-44382726)
chr7 (1-135)||(14220217-14220351)
chr7 (1-135)||(13150742-13150877)
chr7 (2-135)||(12371055-12371189)
chr7 (1-135)||(32434795-32434930)
chr7 (1-133)||(17071378-17071510)
chr7 (1-104)||(17130872-17130975)
chr7 (1-135)||(20618996-20619131)
chr7 (1-135)||(11066179-11066314)
chr7 (1-135)||(48811590-48811725)
chr7 (10-135)||(15120490-15120616)
chr7 (1-122)||(10660383-10660504)
chr7 (1-135)||(30821980-30822115)
chr7 (1-135)||(36705798-36705933)
chr7 (3-105)||(11053466-11053568)
chr7 (1-135)||(14162049-14162184)
chr7 (1-135)||(36686365-36686500)
chr7 (1-135)||(37785487-37785615)
chr7 (25-127)||(13133679-13133781)
chr7 (1-127)||(15281056-15281182)
chr7 (2-135)||(19281831-19281964)
chr7 (1-127)||(33000756-33000882)
chr7 (1-135)||(37728032-37728167)
chr7 (59-135)||(14270559-14270635)
chr7 (1-135)||(43277908-43278043)
chr7 (59-135)||(10064251-10064327)
chr7 (27-127)||(15623783-15623883)
chr7 (59-135)||(18423328-18423404)
chr7 (1-135)||(6170597-6170732)
chr7 (1-135)||(18876014-18876148)
chr7 (59-134)||(17232150-17232225)
chr7 (1-127)||(22001373-22001499)
chr7 (61-135)||(45848150-45848224)
chr7 (59-128)||(18639892-18639961)
chr7 (1-91)||(12128303-12128394)
chr7 (1-127)||(4070529-4070646)
chr7 (1-127)||(15138888-15139014)
chr7 (75-135)||(8468024-8468084)
chr7 (25-127)||(16075882-16075985)
chr7 (25-127)||(9744237-9744338)
chr7 (1-50)||(16579313-16579362)
chr7 (1-50)||(16586300-16586349)
chr7 (1-50)||(32300839-32300888)
chr7 (52-121)||(48214598-48214667)
chr7 (61-127)||(9390234-9390300)
chr7 (89-135)||(12757354-12757400)
chr7 (1-127)||(8136220-8136342)
chr7 (1-50)||(9390191-9390240)
chr7 (86-135)||(15439269-15439318)
chr7 (1-50)||(16461470-16461519)
chr7 (1-50)||(16585212-16585261)
chr7 (1-49)||(14183789-14183837)
chr7 (60-127)||(19558510-19558578)
chr7 (1-32)||(15120452-15120483)
chr7 (1-31)||(3286861-3286891)
chr7 (25-99)||(15105297-15105371)
chr7 (89-135)||(16458706-16458752)
chr7 (1-46)||(20585264-20585309)
chr7 (1-29)||(8468091-8468119)
[»] chr1 (36 HSPs)
chr1 (4-134)||(22349388-22349518)
chr1 (1-135)||(1642273-1642407)
chr1 (13-135)||(24723757-24723879)
chr1 (1-135)||(8277081-8277215)
chr1 (1-135)||(51475805-51475939)
chr1 (1-135)||(41227857-41227992)
chr1 (1-135)||(38888237-38888372)
chr1 (1-135)||(16059493-16059628)
chr1 (1-135)||(20634738-20634873)
chr1 (1-123)||(43542621-43542744)
chr1 (25-127)||(14793587-14793689)
chr1 (25-127)||(17904236-17904338)
chr1 (1-127)||(7322079-7322205)
chr1 (1-135)||(28194944-28195079)
chr1 (1-105)||(42696537-42696643)
chr1 (25-124)||(51323146-51323245)
chr1 (1-135)||(20587485-20587618)
chr1 (1-135)||(20592023-20592156)
chr1 (1-135)||(20636396-20636531)
chr1 (1-135)||(7053175-7053304)
chr1 (24-127)||(21238537-21238640)
chr1 (59-134)||(41306112-41306187)
chr1 (1-127)||(35982174-35982299)
chr1 (2-133)||(38057778-38057910)
chr1 (1-69)||(45754312-45754380)
chr1 (59-135)||(46383074-46383150)
chr1 (56-135)||(43690380-43690459)
chr1 (60-124)||(13301618-13301682)
chr1 (1-105)||(24726145-24726249)
chr1 (1-105)||(19762288-19762393)
chr1 (1-50)||(4597024-4597073)
chr1 (1-50)||(14238665-14238714)
chr1 (1-50)||(19675577-19675626)
chr1 (1-50)||(20241653-20241702)
chr1 (1-50)||(42911875-42911924)
chr1 (1-84)||(43696916-43697000)
[»] chr4 (49 HSPs)
chr4 (4-135)||(40229273-40229404)
chr4 (1-135)||(19734127-19734261)
chr4 (4-135)||(10357648-10357780)
chr4 (1-135)||(51992312-51992447)
chr4 (19-127)||(14629532-14629640)
chr4 (1-105)||(21061344-21061448)
chr4 (1-135)||(13036930-13037065)
chr4 (1-104)||(20342-20445)
chr4 (1-135)||(9637646-9637781)
chr4 (1-135)||(19435888-19436023)
chr4 (1-135)||(33244357-33244492)
chr4 (1-135)||(46642388-46642523)
chr4 (3-135)||(15189844-15189977)
chr4 (1-122)||(15608095-15608216)
chr4 (25-127)||(26922878-26922980)
chr4 (47-124)||(44024640-44024717)
chr4 (2-135)||(16296290-16296424)
chr4 (1-127)||(26444664-26444790)
chr4 (12-122)||(40906542-40906652)
chr4 (59-135)||(7641630-7641706)
chr4 (1-135)||(13844094-13844229)
chr4 (59-135)||(15355770-15355846)
chr4 (59-135)||(19857102-19857178)
chr4 (59-135)||(44773560-44773636)
chr4 (1-105)||(50159833-50159937)
chr4 (12-105)||(32467383-32467476)
chr4 (59-135)||(361775-361851)
chr4 (1-101)||(15364746-15364846)
chr4 (1-103)||(19736316-19736418)
chr4 (57-127)||(15098830-15098900)
chr4 (25-127)||(46739951-46740053)
chr4 (1-50)||(3484861-3484910)
chr4 (1-50)||(14548536-14548585)
chr4 (1-50)||(15042293-15042342)
chr4 (1-50)||(15112082-15112131)
chr4 (1-50)||(35812602-35812651)
chr4 (52-127)||(35659544-35659619)
chr4 (4-50)||(14650446-14650492)
chr4 (1-99)||(27995590-27995688)
chr4 (1-39)||(32467344-32467382)
chr4 (1-50)||(16997351-16997400)
chr4 (1-50)||(25090478-25090527)
chr4 (1-50)||(37018417-37018466)
chr4 (1-50)||(42874623-42874672)
chr4 (89-135)||(4859030-4859076)
chr4 (1-31)||(15098945-15098975)
chr4 (1-39)||(40906654-40906692)
chr4 (1-29)||(361853-361881)
chr4 (1-29)||(19857180-19857208)
[»] scaffold0529 (1 HSPs)
scaffold0529 (1-135)||(7099-7233)
[»] chr5 (25 HSPs)
chr5 (1-135)||(26761215-26761350)
chr5 (1-135)||(20565206-20565340)
chr5 (1-135)||(16227128-16227263)
chr5 (1-104)||(25251023-25251126)
chr5 (1-104)||(25314808-25314911)
chr5 (1-135)||(21406800-21406935)
chr5 (1-135)||(12122612-12122747)
chr5 (1-135)||(36509934-36510069)
chr5 (1-135)||(17874818-17874953)
chr5 (1-135)||(23202870-23203004)
chr5 (1-135)||(5889654-5889789)
chr5 (1-108)||(20470256-20470363)
chr5 (1-135)||(31455294-31455429)
chr5 (1-135)||(21555494-21555629)
chr5 (1-135)||(21742036-21742171)
chr5 (1-127)||(12354164-12354290)
chr5 (1-105)||(25742668-25742772)
chr5 (1-135)||(31454681-31454816)
chr5 (25-127)||(21619214-21619316)
chr5 (1-135)||(21558159-21558294)
chr5 (63-135)||(39244755-39244827)
chr5 (25-127)||(6551675-6551777)
chr5 (1-105)||(10952793-10952898)
chr5 (25-125)||(20198873-20198973)
chr5 (1-29)||(29915511-29915539)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-135)||(19774-19908)
[»] chr6 (34 HSPs)
chr6 (1-135)||(23492392-23492526)
chr6 (1-135)||(23497990-23498124)
chr6 (1-135)||(20411907-20412042)
chr6 (1-135)||(23017319-23017454)
chr6 (1-135)||(20734560-20734695)
chr6 (1-127)||(18458244-18458370)
chr6 (1-135)||(19830076-19830211)
chr6 (1-135)||(25957116-25957251)
chr6 (1-135)||(25965163-25965298)
chr6 (1-127)||(31736003-31736129)
chr6 (1-135)||(27329025-27329164)
chr6 (1-135)||(27389765-27389904)
chr6 (1-135)||(27850668-27850803)
chr6 (60-124)||(28947275-28947339)
chr6 (59-135)||(19859398-19859474)
chr6 (25-127)||(6083915-6084016)
chr6 (25-127)||(22555955-22556057)
chr6 (1-105)||(23083449-23083553)
chr6 (1-80)||(22212636-22212715)
chr6 (25-127)||(19958086-19958188)
chr6 (1-105)||(18260302-18260406)
chr6 (1-104)||(22377022-22377125)
chr6 (1-50)||(17105388-17105437)
chr6 (1-50)||(19656591-19656640)
chr6 (1-50)||(22805488-22805537)
chr6 (13-105)||(15895608-15895700)
chr6 (1-49)||(18452952-18453000)
chr6 (1-50)||(7825470-7825519)
chr6 (1-50)||(27126576-27126625)
chr6 (1-104)||(16245016-16245119)
chr6 (1-50)||(15705906-15705955)
chr6 (1-45)||(20078510-20078554)
chr6 (1-45)||(20136408-20136452)
chr6 (1-45)||(22196417-22196461)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-135)||(65215-65350)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-135)||(20441-20575)
[»] scaffold0462 (2 HSPs)
scaffold0462 (3-135)||(5705-5838)
scaffold0462 (3-135)||(199-332)
[»] scaffold0450 (1 HSPs)
scaffold0450 (1-135)||(13436-13571)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-135)||(78516-78651)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-135)||(31620-31755)
scaffold0001 (1-135)||(36927-37062)
scaffold0001 (1-80)||(446190-446269)
[»] scaffold0737 (1 HSPs)
scaffold0737 (1-135)||(6852-6987)
[»] scaffold0509 (1 HSPs)
scaffold0509 (5-135)||(9968-10099)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-124)||(4158-4281)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-127)||(127549-127675)
[»] scaffold1186 (1 HSPs)
scaffold1186 (19-127)||(417-525)
[»] scaffold0375 (1 HSPs)
scaffold0375 (1-135)||(9508-9641)
[»] scaffold0005 (2 HSPs)
scaffold0005 (19-127)||(187743-187851)
scaffold0005 (4-50)||(166800-166846)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-108)||(109026-109133)
[»] scaffold0371 (3 HSPs)
scaffold0371 (10-135)||(11466-11592)
scaffold0371 (25-127)||(14358-14460)
scaffold0371 (1-32)||(11428-11459)
[»] scaffold0220 (3 HSPs)
scaffold0220 (1-134)||(15514-15648)
scaffold0220 (1-135)||(3248-3383)
scaffold0220 (41-122)||(17237-17318)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-127)||(55801-55927)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-105)||(23987-24091)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-127)||(66197-66320)
[»] scaffold0445 (1 HSPs)
scaffold0445 (8-127)||(3102-3221)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-135)||(38906-39041)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-123)||(56472-56595)
scaffold0034 (1-50)||(116654-116703)
[»] scaffold0195 (1 HSPs)
scaffold0195 (2-135)||(16975-17109)
[»] scaffold0090 (1 HSPs)
scaffold0090 (1-124)||(17083-17206)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-104)||(60041-60144)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-135)||(25946-26081)
[»] scaffold0401 (1 HSPs)
scaffold0401 (1-127)||(7685-7811)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-135)||(1158-1287)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-122)||(7800-7921)
scaffold0083 (1-127)||(11836-11962)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-125)||(113763-113887)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-135)||(3088-3223)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-135)||(2315-2450)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-135)||(10348-10483)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-135)||(142265-142400)
[»] scaffold1223 (1 HSPs)
scaffold1223 (25-123)||(325-423)
[»] scaffold0589 (1 HSPs)
scaffold0589 (1-101)||(3129-3229)
[»] scaffold0113 (1 HSPs)
scaffold0113 (25-127)||(33953-34055)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-105)||(397314-397419)
scaffold0002 (44-127)||(127777-127860)
[»] scaffold1815 (1 HSPs)
scaffold1815 (1-135)||(819-948)
[»] scaffold0630 (1 HSPs)
scaffold0630 (1-135)||(7886-8021)
[»] scaffold0116 (2 HSPs)
scaffold0116 (59-135)||(44309-44385)
scaffold0116 (1-29)||(44279-44307)
[»] scaffold0218 (1 HSPs)
scaffold0218 (1-135)||(9207-9342)
[»] scaffold0063 (1 HSPs)
scaffold0063 (25-127)||(72885-72987)
[»] scaffold0056 (1 HSPs)
scaffold0056 (25-127)||(65794-65896)
[»] scaffold0251 (1 HSPs)
scaffold0251 (28-108)||(21118-21198)
[»] scaffold0022 (1 HSPs)
scaffold0022 (59-135)||(116051-116127)
[»] scaffold0108 (2 HSPs)
scaffold0108 (1-135)||(5164-5299)
scaffold0108 (25-127)||(8100-8202)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-135)||(13866-14001)
[»] scaffold0039 (1 HSPs)
scaffold0039 (56-135)||(11052-11131)
[»] scaffold0645 (1 HSPs)
scaffold0645 (25-127)||(282-384)
[»] scaffold0261 (1 HSPs)
scaffold0261 (25-123)||(7601-7699)
[»] scaffold0107 (2 HSPs)
scaffold0107 (1-135)||(10727-10868)
scaffold0107 (1-135)||(16530-16671)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-105)||(1124-1229)
[»] scaffold0439 (2 HSPs)
scaffold0439 (12-127)||(976-1091)
scaffold0439 (12-127)||(8836-8951)
[»] scaffold0178 (1 HSPs)
scaffold0178 (60-127)||(357-424)
[»] scaffold0035 (2 HSPs)
scaffold0035 (64-134)||(106086-106156)
scaffold0035 (1-29)||(106163-106191)
[»] scaffold0379 (2 HSPs)
scaffold0379 (1-105)||(14921-15025)
scaffold0379 (1-81)||(4913-4993)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-128)||(318-446)
[»] scaffold0231 (1 HSPs)
scaffold0231 (25-103)||(19018-19096)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-127)||(95066-95181)
[»] scaffold0810 (1 HSPs)
scaffold0810 (58-135)||(2565-2642)
[»] scaffold0065 (1 HSPs)
scaffold0065 (4-104)||(53728-53829)
[»] scaffold0008 (1 HSPs)
scaffold0008 (74-135)||(71560-71621)
[»] scaffold0628 (1 HSPs)
scaffold0628 (25-127)||(4726-4828)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-50)||(15191-15240)
[»] scaffold0073 (1 HSPs)
scaffold0073 (1-50)||(56647-56696)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-127)||(3490-3616)
[»] scaffold1662 (1 HSPs)
scaffold1662 (1-50)||(599-648)
[»] scaffold0486 (1 HSPs)
scaffold0486 (1-50)||(8241-8290)
[»] scaffold0452 (1 HSPs)
scaffold0452 (1-50)||(13883-13932)
[»] scaffold0301 (1 HSPs)
scaffold0301 (1-50)||(10741-10790)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-50)||(7301-7350)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-105)||(714-822)
[»] scaffold1633 (1 HSPs)
scaffold1633 (1-50)||(93-142)
[»] scaffold0601 (1 HSPs)
scaffold0601 (1-50)||(8007-8056)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-50)||(7286-7335)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-50)||(19240-19289)
[»] scaffold0331 (1 HSPs)
scaffold0331 (1-105)||(13242-13346)
[»] scaffold0227 (1 HSPs)
scaffold0227 (83-127)||(27605-27649)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-105)||(7778-7882)
[»] scaffold1256 (1 HSPs)
scaffold1256 (52-127)||(496-571)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-105)||(15258-15366)
[»] scaffold0292 (1 HSPs)
scaffold0292 (1-40)||(4489-4528)
[»] scaffold0040 (1 HSPs)
scaffold0040 (2-45)||(21975-22018)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-127)||(39688-39814)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-50)||(10723-10772)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-50)||(1029-1078)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-50)||(19583-19632)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-50)||(145649-145698)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-50)||(63421-63469)


Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 42266724 - 42266855
Alignment:
Q  4 atgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 103  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42266724 atgcatgattaagaagttgaagttgcattgtcgagtcgaaatcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 42266823  T
Q  104 agaaccatgtgaagtattaatatttattaatc 135  Q
    ||||| ||||||||||||||||||||||||||    
T  42266824 agaactatgtgaagtattaatatttattaatc 42266855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 22207103 - 22206970
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22207103 cacatgcatgattaagaagttgtagttgcattgtcgagttgaagtcgttgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 22207004  T
Q  101 tgaagaaccatgtgaagtattaatatttattaat 134  Q
    |||||||| |||||||||||||||||||||||||    
T  22207003 tgaagaactatgtgaagtattaatatttattaat 22206970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 39695743 - 39695876
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaat 101  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39695743 acatgcatgattaagaagttgtagttgcattgtcgagttgaagtcgttgatatcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaat 39695842  T
Q  102 gaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||| ||| ||||||||||||||||||||||||||    
T  39695843 gaaaaactatgtgaagtattaatatttattaatc 39695876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20179658 - 20179793
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatt-atcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||||||||||| |||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  20179658 cacatgcatgattaagaagttgaagttgcatttatcgagtttaagttgttgtagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 20179757  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20179758 atgaagaactatgtgaagtattaatatttattaatc 20179793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22259490 - 22259625
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||| |||||||||||  ||||||  |||| ||||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  22259490 cacatgcatgattaagaagtagaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcattgtcgttaagttgtcatttatcaatgagttgtta 22259589  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  22259590 atgaagaactatgtgaagtattaatatttattaatc 22259625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19127879 - 19127744
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||| ||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  19127879 cacatgcatgattaagacgttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 19127780  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||| ||||||||||||||||||    
T  19127779 atgaagaactatgtgaaatattaatatttattaatc 19127744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22244325 - 22244199
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22244325 cacatgcatgattaagaagttgtagttgcattgtcgagttgaagtcattgatgtcgcattgtcgttgtcgttaagttgtcatttttcaatgagttgttaa 22244226  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || |||||||||| ||||    
T  22244225 tgaagtactatatgaagtattattatt 22244199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 31723875 - 31723999
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||||| || ||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  31723875 cacatgcatgattaagttgttgtagttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgttgttaagttatcatttatcaatgagttgttaa 31723974  T
Q  101 tgaagaaccatgtgaagtattaata 125  Q
    |||||||| ||||||||||||||||    
T  31723975 tgaagaactatgtgaagtattaata 31723999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 36728455 - 36728581
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||| | || ||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  36728455 cacatgcatgattaagttgttgtagttgcattgtcgaattgatgtcgttgttgtcgcattgtcgttgttgttaagtcgtcatttatcaatgagttgttaa 36728554  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||||| |||||| |||||||||||    
T  36728555 tgaagaactatgtgaggtattaatatt 36728581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 5083455 - 5083590
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||| ||||| ||||||||||||||| |||||||||| |||    
T  5083455 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgttgttgttgttaagttgtcatttgtcaatgagttatta 5083554  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  5083555 atgaagaactatgtgaagtattaatatttattaatc 5083590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 20084680 - 20084786
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20084680 cacatgcatgattaagttgttgtagttgcattgtcgagttgacgtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaa 20084779  T
Q  101 tgaagaa 107  Q
    |||||||    
T  20084780 tgaagaa 20084786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23888646 - 23888542
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||| |||| ||||||||| |||||| |||||||||| ||||||||||||||||| |||||||| |||| |||||||||||||||||    
T  23888646 cacatgcatgattaagatgttgtagttgcattgtcgagttgaagtcgttgttgtcgcattgtcgttgttgttaagttttcatctatcaatgagttgttaa 23888547  T
Q  101 tgaag 105  Q
    |||||    
T  23888546 tgaag 23888542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23947200 - 23947074
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||| ||||||||||||||| ||||||||| |||||| |||||||||| || ||||||||||||||||||||| |||||||| || ||||||||||||    
T  23947200 cacatgtatgattaagaagttgtagttgcattgtcgagttgaagtcgttgatgccgcattgtcgttgtcgttaagctgtcatttttccatgagttgttaa 23947101  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || ||||| |||| ||||    
T  23947100 tgaagtactatatgaagaattattatt 23947074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41681789 - 41681924
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| ||    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  41681789 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtataagtcgcattgtcgttgtcgttaagttgtcaattgtcaatgagttgtta 41681888  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||| ||||||||||||||||||    
T  41681889 ataaagaactaagtgaaatattaatatttattaatc 41681924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17908060 - 17908186
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||| |||| ||||||||| |||||| ||||| |||| ||||||||||||||||| || |||||||||| ||||||||||| |||||    
T  17908060 cacatgcatgattaagatgttgtagttgcattgtcgagttgaagttgttgttgtcgcattgtcgttgttgtcaagttgtcatctatcaatgagtggttaa 17908159  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || ||||| |||| ||||    
T  17908160 tgaagtactatatgaagaattattatt 17908186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23418269 - 23418165
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||  |||  |||| |||||||||||||| ||| |||||||||||||| |||||||||| ||||    
T  23418269 cacatgcatgattaagaagttgaagttgcattgtcgagtttaagaagttgatgtcgcattgtcgtagtctttaagttgtcatttttcaatgagttattaa 23418170  T
Q  101 tgaag 105  Q
    |||||    
T  23418169 tgaag 23418165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 38550510 - 38550586
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  38550510 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 38550586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20983120 - 20983255
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| ||||||||||||||    
T  20983120 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttgtta 20983219  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||| || |||||||||||||||    
T  20983220 ataaagaactaagtgaaataataatatttattaatc 20983255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29763938 - 29764073
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||| ||||||||||| ||||||||||| ||||||||||||||    
T  29763938 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattttcgttgtcgttgagttgtcatttgtcaatgagttgtta 29764037  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || | |||| | ||||||||||||||||||||||||    
T  29764038 ataatgaactaagtgaagtattaatatttattaatc 29764073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39833612 - 39833477
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| |||||||||| |||    
T  39833612 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttatta 39833513  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||| ||||||||||||||||    
T  39833512 ataaagaactaagtgaagtgttaatatttattaatc 39833477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17217507 - 17217381
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||| ||||||||||||   ||||||||| || ||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  17217507 cacatgcgtgattaagaagtcttagttgcattgtctagttgaagtcgttgatgtcgcattgtcgctgtcgttaagttgtcatttttcaatgagttgttaa 17217408  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    || || || || ||||| |||| ||||    
T  17217407 tggagtactatatgaagaattattatt 17217381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 21580344 - 21580473
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||||||| || ||||||||||||||    
T  21580344 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgtcgttaagttgtcaattgtcaatgagttgtta 21580443  T
Q  100 atgaag-aaccatgtgaagtattaatattt 128  Q
    || ||| ||| | |||||||||||||||||    
T  21580444 ataaagaaactaagtgaagtattaatattt 21580473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 1323602 - 1323678
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  1323602 ttgtcgttgtcgttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 1323678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 13428567 - 13428643
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||| ||||||||||||||||||    
T  13428567 ttgtcgttgtcgttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatattaatatttattaatc 13428643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 27472811 - 27472883
Alignment:
Q  63 cgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  27472811 cgttgtcgttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 27472883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 23669343 - 23669208
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||| ||| | | ||||  |||| ||    || ||||||||||||||||||||||||||||| ||||||||||||||    
T  23669343 cacatgcatgattaagaagttgaagttccatatgttgagtttaagttgtaaaagttgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 23669244  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||  |||||   ||||| ||||||||||||||||||    
T  23669243 atagagaacttggtgaaatattaatatttattaatc 23669208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 26219437 - 26219358
Alignment:
Q  56 gcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| || ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  26219437 gcattgtcgttgtccttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 26219358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13665592 - 13665696
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| |||| |||||||| | ||||||||||| |||| || |||||||||    
T  13665592 cacatgcatgattaagaagatgtagttgcattgtcgagttgaagtcgtagatgttgcatagtcgttgttgataagttgtcatctatctataagttgttaa 13665691  T
Q  101 tgaag 105  Q
    |||||    
T  13665692 tgaag 13665696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13724867 - 13724971
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| |||| |||||||| | ||||||||||| |||| || |||||||||    
T  13724867 cacatgcatgattaagaagatgtagttgcattgtcgagttgaagtcgtagatgttgcatagtcgttgttgataagttgtcatctatctataagttgttaa 13724966  T
Q  101 tgaag 105  Q
    |||||    
T  13724967 tgaag 13724971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18302979 - 18303114
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||| ||||||||||||||||||||||||||| || ||    
T  18302979 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgtcgtcgttaagttgtcatttatcaatgag-tgata 18303077  T
Q  100 atgaagaacca-tgtgaagtattaatatttattaatc 135  Q
    |  |||||| | |||||||||||||| ||||| ||||    
T  18303078 aaaaagaactattgtgaagtattaatgtttatcaatc 18303114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 20046624 - 20046700
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||| ||| |||||| | ||||||||||||||||||||||||    
T  20046624 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgtcaataaagaactaagtgaagtattaatatttattaatc 20046700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 26225733 - 26225812
Alignment:
Q  56 gcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||| |||||| | ||||||||||||||| ||||||||    
T  26225733 gcattgtcgttgtcgttgagttgtcatttgtcaattagttgttaataaagaactaagtgaagtattaatatatattaatc 26225812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 2717947 - 2718049
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| ||||||||||||||||| |||||||||||| |||  ||||| ||||||||||  ||| ||||||||||| |||    
T  2717947 gttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattactaatgacttgttaatgagaaactatgtgaagtatcaat 2718046  T
Q  125 att 127  Q
    |||    
T  2718047 att 2718049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 22319141 - 22319205
Alignment:
Q  60 tgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  22319141 tgtcgttgttgttaagttgtcaattatcaatgagttgttaacgaagaactatgtgaagtattaat 22319205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 4381951 - 4382050
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || |||| || ||| ||||||||||||| || ||||||||| |||| ||||||||||||||||  ||| |||||||||||||||    
T  4381951 gttgcattgtcgagttgatgtcgatgttgttgcattgtcgttgttgtcaagttgtcaattattaatgagttgttaatgagaaactatgtgaagtattaat 4382050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20025379 - 20025505
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||| ||||||  ||||  |||||||| ||||||  | |||| || ||||||||||||||||| || ||||||||| |||  |||||||||||||    
T  20025379 cacatgcattattaagttgttgttgttgcattgtcgagttaatgtcgatgttgtcgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaa 20025478  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||  ||| ||||||||||| ||||||    
T  20025479 tgagaaactatgtgaagtatcaatatt 20025505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22584862 - 22584988
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||| ||||| |||||  ||||| ||| |||||| ||||| |||| |||  ||||||||||||| |||||||||||||| ||||||| || ||||    
T  22584862 cacatgcataattaaaaagttatagttgtattgtcgagttgaagttgttgatgttacattgtcgttgtcattaagttgtcatttttcaatgaattattaa 22584961  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || ||||| |||| ||||    
T  22584962 tgaagtactatatgaagaattattatt 22584988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9109 - 9042
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgt 68  Q
    |||||||||||||||||||||| ||||||||| || ||| |||||||| | |||||||||||||||||    
T  9109 cacatgcatgattaagaagttgcagttgcattgtcaagttgaagtcgtcgatgtcgcattgtcgttgt 9042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19929948 - 19929997
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  19929948 cacatgcatgattaagaagttgaagttgcattgtcgagtcaaagtcgttg 19929997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5760302 - 5760256
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcg 47  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  5760302 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcg 5760256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19698989 - 19698951
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagt 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  19698989 cacatgcatgattaagaagttgaagttgcattgtcgagt 19698951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 18820199 - 18820300
Alignment:
Q  26 ttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaata 125  Q
    ||||||| |||||| || |||| || | || |||||||||||| || ||||||||| |||   |||||||||||||||  ||| ||||||||||| ||||    
T  18820199 ttgcattgtcgagttgatgtcgatgttatctcattgtcgttgttgtcaagttgtcaattactgatgagttgttaatgagaaactatgtgaagtatcaata 18820298  T
Q  126 tt 127  Q
    ||    
T  18820299 tt 18820300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42819077 - 42819126
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||||||||  |||||||||| ||||||| |||| ||||    
T  42819077 cacatgcatgattaagaagtcaaagttgcattgtcgagtccaagttgttg 42819126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25849567 - 25849603
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcga 37  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  25849567 cacatgcatgattaagaagtagaagttgcattgtcga 25849603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 45531748 - 45531882
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45531748 cacatgcatgattaagaagttgtagttgcattgtcgagttgaagtcgttgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 45531847  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  45531848 tgaagaactatgtgaagtattaatatttattaatc 45531882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 42327446 - 42327580
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  42327446 cacatacatgattaagaagttgaagttgcattgtcgagtcgaagtcgttggagtcgcattgtcgttgtcgttaagctgtcatttattaatgagttgttaa 42327545  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  42327546 tgaagaactatgtgaagtattaatatttattaatc 42327580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19569448 - 19569582
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19569448 cacatgcatgattaagaagttgtagttgcattgtcgagttgaagtcgttgatgtcgcattgtcgttgtagttaagttgtcatttatcaatgagttgttaa 19569547  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||||||| ||||||||||||||||||    
T  19569548 agaagaactatgtgaaatattaatatttattaatc 19569582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 53647002 - 53647137
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  53647002 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 53647101  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    | ||||||| ||||||||||||||||||||||||||    
T  53647102 aggaagaactatgtgaagtattaatatttattaatc 53647137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 16728213 - 16728079
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16728213 cacatgcatgattaagaagttgtagttgcattgtcgggtcgaagtcgctgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagctgttaa 16728114  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||| |||||||||| |||||||||||    
T  16728113 cgaagaactatgagaagtattaacatttattaatc 16728079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9644375 - 9644247
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||||||      ||||||||||||||||||||||||||||    
T  9644375 cacatgcatgattaagaagttgaagttgcattgtcgattcgaagtcgttggtttcacattgtcgtt------aagttgtcatttatcaatgagttgttaa 9644282  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  9644281 tgaagaactatgtgaagtattaatatttattaatc 9644247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14507792 - 14507657
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14507792 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagatgtta 14507693  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| |||| |||||||||||||||||||||    
T  14507692 atgaagaactatgtaaagtattaatatttattaatc 14507657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22307766 - 22307901
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||  ||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22307766 cacatgcatgattaagaagttgaagtaacatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 22307865  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  22307866 atgaagaactatgtgaagtattaatatttattaatc 22307901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12506805 - 12506938
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||  | ||||  |||| || |  |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  12506805 cacatgcatgattaagaagttgaagttgcatgtt-gagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttattaa 12506903  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  12506904 tgaagaactatgtgaagtattaatatttattaatc 12506938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14642676 - 14642811
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  14642676 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 14642775  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  14642776 ataaagaactaagtgaagtattaatatttattaatc 14642811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41173483 - 41173618
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| |||| ||||| |||    
T  41173483 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaacgagttatta 41173582  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  41173583 atgaagaactatgtgaagtattaatatttattaatc 41173618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 37037781 - 37037646
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||  || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  37037781 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagatgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 37037682  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  37037681 ataaagaactaagtgaagtattaatatttattaatc 37037646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 17043984 - 17043850
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| ||||||||||||||    
T  17043984 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 17043885  T
Q  100 atgaagaaccatgtgaagtattaatatttattaat 134  Q
    || |||||| | |||||||||||||||||||||||    
T  17043884 ataaagaactaagtgaagtattaatatttattaat 17043850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14153553 - 14153688
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  14153553 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcactgagttgtta 14153652  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  14153653 ataaagaactaagtgaagtattaatatttattaatc 14153688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 50349186 - 50349321
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||| |||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  50349186 cacatgcatgattaagaaattgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 50349285  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | |||||||||||||| |||||||||    
T  50349286 ataaagaactaagtgaagtattaatacttattaatc 50349321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6145949 - 6145823
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| |||||| || ||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  6145949 cacatgcatgtttaagttgttgttgttgcattgtcgagttgatgtcgttgttgtcgcattgttgttgttgttaagttatcatttatcaatgagttgttaa 6145850  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||||| |||||||| |||||||||    
T  6145849 tgaagaactatgtgaaggattaatatt 6145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20417042 - 20416916
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||| ||| ||||||||| ||||||  |||| |||| ||||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  20417042 cacatgcatgattaagaatttgtagttgcattgtcgagttaaagttgttgatgtcgcattgtcgttgtcgttaagttgtcatttttcaacgagttattaa 20416943  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || |||||||| |||| ||||    
T  20416942 tgaagtactatgtgaagaattattatt 20416916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 15017582 - 15017461
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  15017582 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaggtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 15017483  T
Q  100 atgaagaaccatgtgaagtatt 121  Q
    || |||||| ||||||| ||||    
T  15017482 ataaagaactatgtgaaatatt 15017461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 6158323 - 6158188
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||| ||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| ||||||||||||||    
T  6158323 cacatgcatgattaaaaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 6158224  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | |||| |||||||||||||||||||    
T  6158223 ataaagaactaagtgatgtattaatatttattaatc 6158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 16049731 - 16049612
Alignment:
Q  8 atgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaa 107  Q
    |||||||||| |||| ||||||||| |||||| |||||||||| ||| |||||||||||   |||||||||||||||||||||||||||||||||| |||    
T  16049731 atgattaagatgttgtagttgcattgtcgagttgaagtcgttgttgtagcattgtcgttactgttaagttgtcatttatcaatgagttgttaatgatgaa 16049632  T
Q  108 ccatgtgaagtattaatatt 127  Q
    | || ||||| |||||||||    
T  16049631 ctatatgaagaattaatatt 16049612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 49390163 - 49390298
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||||||| || | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| |||||||||| |||    
T  49390163 cacatgcatgattaagaagttgaagttgtatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttatta 49390262  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| | ||||||||||||||||||||||||    
T  49390263 atgaagaactaagtgaagtattaatatttattaatc 49390298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 16044252 - 16044136
Alignment:
Q  11 attaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaacca 110  Q
    ||||||| |||| ||||||||| |||||| |||||||||| ||| |||||||||||   |||||||||||||||||||||||||||||||||| |||| |    
T  16044252 attaagatgttgtagttgcattgtcgagttgaagtcgttgttgtagcattgtcgttactgttaagttgtcatttatcaatgagttgttaatgatgaacta 16044153  T
Q  111 tgtgaagtattaatatt 127  Q
    | ||||| |||||||||    
T  16044152 tatgaagaattaatatt 16044136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 16059111 - 16058995
Alignment:
Q  11 attaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaacca 110  Q
    ||||||| |||| ||||||||| |||||| |||||||||| ||| |||||||||||   |||||||||||||||||||||||||||||||||| |||| |    
T  16059111 attaagatgttgtagttgcattgtcgagttgaagtcgttgttgtagcattgtcgttactgttaagttgtcatttatcaatgagttgttaatgatgaacta 16059012  T
Q  111 tgtgaagtattaatatt 127  Q
    | ||||| |||||||||    
T  16059011 tatgaagaattaatatt 16058995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 12269210 - 12269075
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||| ||||||||||| ||||||||||| ||||||||||||||    
T  12269210 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattttcgttgtcgttgagttgtcatttgtcaatgagttgtta 12269111  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || | |||| | ||||||||||||||||||||||||    
T  12269110 ataatgaactaagtgaagtattaatatttattaatc 12269075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18440342 - 18440477
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||| |||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| ||||||||||||||    
T  18440342 cacatgcatgataaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttgtta 18440441  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||| ||||||||||||||||||    
T  18440442 ataaagaactaagtgaaatattaatatttattaatc 18440477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19485416 - 19485551
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||| |||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| ||||||||||||||    
T  19485416 cacatgcatgataaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttgtta 19485515  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||| ||||||||||||||||||    
T  19485516 ataaagaactaagtgaaatattaatatttattaatc 19485551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 11191825 - 11191723
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  11191825 gttgcattgtcgagtggatgtcgttgttgtcggattgtcgttgttattaagttgtcatttatcaatgagttgttaatgaaaaactatgtgaagcattaat 11191726  T
Q  125 att 127  Q
    |||    
T  11191725 att 11191723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 12512999 - 12513081
Alignment:
Q  53 gtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  12512999 gtcgcattgtcgttgtcgttaagtagtcatttgtcaatgagttattaataaagaactatgtgaagtattaatatttattaatc 12513081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 35065812 - 35065922
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||  ||| |||||||||||||| ||||||| |||||||||||| ||||||||| || |||| |||||||||||||||    
T  35065812 gttgcattgtcgagtggatgtcgttaatgttgcattgtcgttgtcattaagttatcatttatcaataagttgttaacgatgaactatgtgaagtattaat 35065911  T
Q  125 atttattaatc 135  Q
    |||||||||||    
T  35065912 atttattaatc 35065922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 16180138 - 16180239
Alignment:
Q  26 ttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaata 125  Q
    ||||||| ||||||  | ||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||    
T  16180138 ttgcattgtcgagtgaatgtcgttgttgttgcattgtcgttgttgttaagttgtcatttatcaatgagatgttaatgaagaactatgtgaaatattaata 16180237  T
Q  126 tt 127  Q
    ||    
T  16180238 tt 16180239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 6469603 - 6469679
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  6469603 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 6469679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8492610 - 8492678
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtc 69  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  8492610 cacatgcatgattaagaagttgaagttgcattgtcgagtcgaagtcgttgatgtcgcatcgtcgttgtc 8492678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 11562413 - 11562311
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| || ||| || || |||| ||||||||||||||||| | |||||| |||||||| ||| ||||||||||||||||| |||||||||||||||    
T  11562413 gttgcattgtcaagtggatgttgttgttgtcgcattgtcgttgttgctaagttatcatttataaataagttgttaatgaagaactatgtgaagtattaat 11562314  T
Q  125 att 127  Q
    |||    
T  11562313 att 11562311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 21618157 - 21618080
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatg-agttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||| | ||||||||||||||||||||||||    
T  21618157 ttgtcgttgtcgttgagttgtcatttatcaatggagttgttaataaagaactaagtgaagtattaatatttattaatc 21618080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 15076409 - 15076485
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||| ||||| |||||| | ||||||||||||||||||||||||    
T  15076409 ttgtcgttgtcgttgagttgtcatttgtcaatgagttattaataaagaactaagtgaagtattaatatttattaatc 15076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 28849083 - 28849159
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | |||||||||| |||||||||||||    
T  28849083 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtatttatatttattaatc 28849159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 45578295 - 45578371
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||| ||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  45578295 ttgtcgttgttgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 45578371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 46751872 - 46751768
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| |||| |||||||| | ||||||||||| |||| || |||||||||    
T  46751872 cacatgcatgattaagaagatgtagttgcattgtcgagttgaagtcgtagatgttgcatagtcgttgttgataagttgtcatctatccataagttgttaa 46751773  T
Q  101 tgaag 105  Q
    |||||    
T  46751772 tgaag 46751768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 17669128 - 17669009
Alignment:
Q  8 atgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaa 107  Q
    |||||||||| ||| |||||||||| |||||| || |||| || ||| ||||||||||||| || ||||||||| |||  ||||||||||||||||  ||    
T  17669128 atgattaagatgtttaagttgcattgtcgagttgatgtcgatgttgttgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaatgagaaa 17669029  T
Q  108 ccatgtgaagtattaatatt 127  Q
    | ||||||||||| ||||||    
T  17669028 ctatgtgaagtatcaatatt 17669009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 23431324 - 23431398
Alignment:
Q  60 tgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaat 134  Q
    ||||||||||| ||||||||||||| |||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  23431324 tgtcgttgtcgataagttgtcatttgtcaatgagttattaatgaagaattatgtggagtattaatatttattaat 23431398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 36166263 - 36166186
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatg-agttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| |||||||||||||||| | |||||||||| |||||| | ||||||||||||||||||||||||    
T  36166263 ttgtcgttgtcgttgagttgtcatttatcaaaggagttgttaataaagaactaagtgaagtattaatatttattaatc 36166186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 15977193 - 15977117
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||| || ||||||||||| |||||||||||||||| |||||| | |||||||||| |||||||||||||    
T  15977193 ttgtcgttgtctttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtatttatatttattaatc 15977117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 11886922 - 11886989
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgt 68  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||| |||| |||||||||||||||||    
T  11886922 cacatgcatgattaagaagttgtagttgcattgtcgagttgaagttgttgatgtcgcattgtcgttgt 11886989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 13179211 - 13179128
Alignment:
Q  44 gtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||| |||||| |||||||||| | |||||||||| ||| |||||||||||||||||||||| || |||||  ||||||||    
T  13179211 gtcgttgttgtcgctttgtcgttgttgctaagttgtcaattagcaatgagttgttaatgaagaactatatgaagagttaatatt 13179128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19574872 - 19574777
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgca-ttatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagtt 95  Q
    |||||||||||||||||||||||||||||| || | ||||  |||| || |  ||||||||||| |||||||||| ||||||||| ||||||||||    
T  19574872 cacatgcatgattaagaagttgaagttgcatttgttgagtttaagttgtagaagtcgcattgtcattgtcgttaaattgtcatttgtcaatgagtt 19574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 17207022 - 17206920
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || || | | |||||||||||||||||| || ||||||||| |||  ||||||||||||||||  ||| ||||||||||| |||    
T  17207022 gttgcattgtcgagttgatgttgattgtgtcgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaat 17206923  T
Q  125 att 127  Q
    |||    
T  17206922 att 17206920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 24556916 - 24556996
Alignment:
Q  47 gttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    |||| ||||||||||||||||| || ||||||||| |||  ||||||||||||||||  ||| ||||||||||| ||||||    
T  24556916 gttgatgtcgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaatatt 24556996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2842631 - 2842680
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  2842631 cacatgcatgattaagaagtcgaagttgcattttcgagtcaaagtcgttg 2842680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5214806 - 5214757
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  5214806 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 5214757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10542984 - 10543033
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  10542984 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 10543033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10562562 - 10562513
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  10562562 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 10562513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18700839 - 18700888
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  18700839 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 18700888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 19574745 - 19574704
Alignment:
Q  94 ttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  19574745 ttgttaatgaagaactatgtgaagtattaatatttattaatc 19574704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 24545509 - 24545436
Alignment:
Q  54 tcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||||||||||| || ||||||||| |||  ||||||||||||||||  ||| ||||||||||| ||||||    
T  24545509 tcgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaatatt 24545436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35353444 - 35353395
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  35353444 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 35353395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43890149 - 43890198
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  43890149 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 43890198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44269483 - 44269434
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  44269483 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 44269434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 1465980 - 1466028
Alignment:
Q  57 cattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaag 105  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  1465980 cattgtcgttgtctttaagttgacatttttcaatgagttgttaatgaag 1466028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 24553866 - 24553946
Alignment:
Q  47 gttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    |||| ||||||| ||||||||| || ||||||||| |||  ||||||||||||||||  ||| ||||||||||| ||||||    
T  24553866 gttgatgtcgcactgtcgttgttgtcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaatatt 24553946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14441183 - 14441134
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||| ||||||||||||| ||||||||||| ||||||| |||||||||    
T  14441183 cacatgtatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 14441134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 15024753 - 15024822
Alignment:
Q  58 attgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    |||||||||||| |||||||||||||| ||||||| || ||||||||| || || ||||| |||| ||||    
T  15024753 attgtcgttgtctttaagttgtcatttttcaatgaattattaatgaagtactatatgaagaattattatt 15024822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42353649 - 42353698
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||| |||| ||||||||||| ||||||| |||||||||    
T  42353649 cacatgcatgattaaaaagtcgaagttgcattgtcgagtcaaagtcgttg 42353698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 54331588 - 54331639
Alignment:
Q  52 tgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 103  Q
    |||| ||||||||||||||| ||||||||| |||  ||||||||||||||||    
T  54331588 tgtcacattgtcgttgtcgtcaagttgtcaattactaatgagttgttaatga 54331639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18389425 - 18389559
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18389425 cacatgcatgattaggaagttgtagttgcattatcgagtcgaagtcgctgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 18389524  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||||||||||||||||||||||||||    
T  18389525 cgaagaactatgtgaagtattaatatttattaatc 18389559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10897793 - 10897927
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| ||| |||||  |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10897793 cacatgcatgattaagaagttgtagttgcattgtcgagttgaaatcgttaatgtcgccttgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 10897892  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  10897893 tgaagaactatgtgaagtattaatatttattaatc 10897927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25085338 - 25085203
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  25085338 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttatta 25085239  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| | ||||||||||||||||||||||||    
T  25085238 atgaagaactaagtgaagtattaatatttattaatc 25085203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 5032528 - 5032663
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  5032528 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 5032627  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||| ||| || |||||||||||||||| ||||||    
T  5032628 atgaataactatatgaagtattaatatttgttaatc 5032663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 24782069 - 24782201
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  24782069 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 24782168  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
       |||||| ||| ||||||||||||||||||||||    
T  24782169 ---aagaactatgggaagtattaatatttattaatc 24782201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 356926 - 356791
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||||||| || ||||||||||||||    
T  356926 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcaattgtcaatgagttgtta 356827  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  356826 ataaagaactaagtgaagtattaatatttattaatc 356791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 10744111 - 10744213
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| ||||||  | ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10744111 gttgcattgtcgagtgaatgtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaat 10744210  T
Q  125 att 127  Q
    |||    
T  10744211 att 10744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19357870 - 19357737
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||| ||||||||||||| || | | |||||||| | | ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  19357870 cacatgcatgattaagaaattgaagttgcattgtcaatttgaagtcgt-gatatcgcattgttgttgtcgttaagttgttatttatcaatgagttgttaa 19357772  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||||| | ||||||||||||||||||    
T  19357771 agaagaactatgtgcattattaatatttattaatc 19357737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 25140806 - 25140704
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  25140806 gttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgttgttatgttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaat 25140707  T
Q  125 att 127  Q
    |||    
T  25140706 att 25140704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 27851503 - 27851377
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||| | || ||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  27851503 cacatgcatgattaagttgttgtagttgcattgtcgaattgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattatcaaagagttgttaa 27851404  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||||| |||||||| |||||||||    
T  27851403 tgaagaacaatgtgaagaattaatatt 27851377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 27860214 - 27860092
Alignment:
Q  5 tgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaa 104  Q
    ||||||||||||  |||| ||||||||| |||||| || ||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  27860214 tgcatgattaagttgttgtagttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgtttttaagttgtcaattatcaatgagttgttaatgaa 27860115  T
Q  105 gaaccatgtgaagtattaatatt 127  Q
    |||| |||||||| |||||||||    
T  27860114 gaactatgtgaagaattaatatt 27860092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9974813 - 9974678
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||| |||||| || ||||||||||||||    
T  9974813 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgtcgttaaattgtcaattgtcaatgagttgtta 9974714  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  9974713 ataaagaactaagtgaagtattaatatttattaatc 9974678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22500771 - 22500636
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||| |||||||||||| || |||| |||||||||    
T  22500771 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgttgttaagttgtcaattgtcaacgagttgtta 22500672  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| | ||||||||||||||||||||||||    
T  22500671 atgaagaactaagtgaagtattaatatttattaatc 22500636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22508705 - 22508570
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||| |||||||||||| || |||| |||||||||    
T  22508705 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgttgttaagttgtcaattgtcaacgagttgtta 22508606  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| | ||||||||||||||||||||||||    
T  22508605 atgaagaactaagtgaagtattaatatttattaatc 22508570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24883350 - 24883215
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||||||| || ||||||||||||||    
T  24883350 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgtcgttaagttgtcaattgtcaatgagttgtta 24883251  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || ||||||   | ||||||||||||||||||||||    
T  24883250 ataaagaacttggagaagtattaatatttattaatc 24883215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 14693149 - 14693043
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| || ||||||| ||| |||||||||||||||| ||||| |||||| |||||||||| ||||    
T  14693149 cacatgcatgattaagaagttgtagttgcattgtcgagttgaggtcgttgatgttgcattgtcgttgtcgtaaagttttcatttttcaatgagttattaa 14693050  T
Q  101 tgaagaa 107  Q
    |||||||    
T  14693049 tgaagaa 14693043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5985053 - 5984949
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| | |||| ||||| |||  |||||||||||||||||||||||||||||| || |||||||||| ||||    
T  5985053 cacatgcatgattaagaagttgtagttgcattgttgagttgaagttgtttatgtcgcattgtcgttgtcgttaagttgtcacttttcaatgagttattaa 5984954  T
Q  101 tgaag 105  Q
    |||||    
T  5984953 tgaag 5984949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22689568 - 22689442
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||| ||||||||||||||||||||||||  || ||| ||||||||||  || | |||||||||||| |||||||||||||| |||||||||||||||    
T  22689568 cacatgtatgattaagaagttgaagttgcatagtcaagttgaagtcgttgaagttgtattgtcgttgtctttaagttgtcatttttcaatgagttgttaa 22689469  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| ||  | |||||||||| ||||    
T  22689468 tgaagtactttatgaagtattattatt 22689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 28576821 - 28576745
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  28576821 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 28576745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 22258807 - 22258705
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| |  ||||||| |||||||||||||| || |||||||||||| ||| |||  ||||||||||||||||| |||||||||||||||    
T  22258807 gttgcattgtcgagttgttgtcgttgttgtcgcattgtcgtcgttgttaagttgtcaattaccaacaagttgttaatgaagaactatgtgaagtattaat 22258708  T
Q  125 att 127  Q
    |||    
T  22258707 att 22258705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27039316 - 27039421
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| |||||||| | |||    
T  27039316 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagatatta 27039415  T
Q  100 atgaag 105  Q
    ||||||    
T  27039416 atgaag 27039421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 18391478 - 18391558
Alignment:
Q  47 gttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||  ||||||||    
T  18391478 gttgatgtcgctttgtcgttgtggttaagttgtcatttatcaatgagttgttaatgaagaactatatgaagagttaatatt 18391558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 45030318 - 45030389
Alignment:
Q  64 gttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  45030318 gttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 45030389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 44071400 - 44071298
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| ||||||||||||||||| ||||||||||||  |||||||||||||| || ||| |   |||||||| ||||||    
T  44071400 gttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaaatatcaatgagttgtcaaagaaaatttatgtgaagaattaat 44071301  T
Q  125 att 127  Q
    |||    
T  44071300 att 44071298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 1384905 - 1385012
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || |||| || ||||||||||| ||||| || ||||||||| |||  ||||||||||||||||  ||| ||||||||||| |||    
T  1384905 gttgcattgtcgagttgatgtcgatgttgtcgcattgttgttgttgtcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaat 1385004  T
Q  125 atttatta 132  Q
    ||| ||||    
T  1385005 attaatta 1385012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 3538616 - 3538549
Alignment:
Q  60 tgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||||||| || ||||| |||||||||    
T  3538616 tgtcgttgttgttaaattgtcaattatcaatgagttgttaatgaagaacaatatgaagaattaatatt 3538549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 21367703 - 21367584
Alignment:
Q  8 atgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaa 107  Q
    |||||||||| ||  |||||| ||| |||||| |  |||| || ||||||||||||||||| || |||||||||||||  ||||||||||||||||  ||    
T  21367703 atgattaagatgtctaagttgaattgtcgagttgttgtcgatgttgtcgcattgtcgttgttgtcaagttgtcatttactaatgagttgttaatgagaaa 21367604  T
Q  108 ccatgtgaagtattaatatt 127  Q
    | ||||||| ||| ||||||    
T  21367603 ctatgtgaaatatcaatatt 21367584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 22688555 - 22688476
Alignment:
Q  56 gcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||  | |||  ||||||| ||||||||||||||||||    
T  22688555 gcattgtcgttgtcgttgagttgtcatttatcaatgagttataaaaaaggaaatatgtgaaatattaatatttattaatc 22688476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17306361 - 17306312
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  17306361 cacatgcatgattaagaagttgaagttgcattgtcgagtcaaagtcgttg 17306312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 28653681 - 28653729
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  28653681 acatgcatgattaagaagttgaagttgcattgtcgagtcaaagtcgttg 28653729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21336867 - 21336969
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  ||||  |||||||| |||||| || |||| || ||| ||||||||||||| || ||||||||  |||  |||||||||||||    
T  21336867 cacatgcatgattaagttgttgttgttgcattgtcgagttgatgtcgatgttgttgcattgtcgttgttgtcaagttgtcgattactaatgagttgttaa 21336966  T
Q  101 tga 103  Q
    |||    
T  21336967 tga 21336969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25044929 - 25044825
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||| ||||||||||| | | ||||  |||| || |  ||||||||||||||||| | |||||||||||| |||||||||| ||     
T  25044929 cacatgcatgattaagaagctgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcat-aagttgtcatttttcaatgagttattg 25044831  T
Q  100 atgaag 105  Q
    ||||||    
T  25044830 atgaag 25044825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24835167 - 24835271
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || || |||||  |||||| ||||| || | ||| ||||||||||||| | ||||||||||| |||| ||  | ||||||    
T  24835167 cacatgcatgattaagaagatgtagctgcatagtcgagttgaagttgtagatgttgcattgtcgttgttgataagttgtcatctatctataggctgttaa 24835266  T
Q  101 tgaag 105  Q
    |||||    
T  24835267 tgaag 24835271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24815804 - 24815908
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || || | |||  |||||| |||||| | | ||| ||||||||||||| | ||||||||||| |||| ||  | ||||||    
T  24815804 cacatgcatgattaagaagatgtagctccatagtcgagttgaagtcttagatgttgcattgtcgttgttgataagttgtcatctatctataggctgttaa 24815903  T
Q  101 tgaag 105  Q
    |||||    
T  24815904 tgaag 24815908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 26896198 - 26896168
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat 31  Q
    |||||||||||||||||||||||||||||||    
T  26896198 cacatgcatgattaagaagttgaagttgcat 26896168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 21316880 - 21316979
Alignment:
Q  4 atgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtc-atttatcaatgagttgttaatg 102  Q
    |||||||||||||   |||  |||| ||| |||||| || |||| || ||||||||||||||||| || |||||||| |||| | |||||||||||||||    
T  21316880 atgcatgattaagttattgttgttgtattgtcgagttgatgtcgatgttgtcgcattgtcgttgttgtcaagttgtcgatttct-aatgagttgttaatg 21316978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 107; Significance: 9e-54; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 47654 - 47788
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  47654 cacatgcatgattaagaagttgaagtttcattgtcgagtcgaagtcgttgatgtcgcattgtcattgttgttaagttgtcatttatcaatgagttgttaa 47753  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||| ||| ||||||||||||||||||||||||||    
T  47754 tgaaaaactatgtgaagtattaatatttattaatc 47788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 28201 - 28097
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||  ||||||||| || ||| |||||||||| ||||||||| || |||| ||||||||||||||| |||||||||||||||    
T  28201 cacatgcatgattaagaagttttagttgcattgtcaagttgaagtcgttgatgtcgcattatcattgttgttaagttgtcatttgtcaatgagttgttaa 28102  T
Q  101 tgaag 105  Q
    |||||    
T  28101 tgaag 28097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 9e-54; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13699844 - 13699978
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||| |||||||||||| ||||||||| |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  13699844 cacatgcataattaagaagttgtagttgcattgtcgagttgaagtcgttgatgccgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 13699943  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  13699944 tgaagaactatgtgaagtattaatatttattaatc 13699978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 47094052 - 47093918
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47094052 cacatgcatgattaagaagttgtagttgcattgtcaagtcgaagtcgctgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 47093953  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||||||| ||||||||||||||||||    
T  47093952 cgaagaactatgtgaaatattaatatttattaatc 47093918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 44373861 - 44373726
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatt-atcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||||||||||| |||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  44373861 cacatgcatgattaagaagttgaagttgcatttatcgagtttaagttgttgtagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 44373762  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  44373761 atgaagaactatgtgaagtattaatatttattaatc 44373726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 44382726 - 44382591
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatt-atcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||||||||||| |||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  44382726 cacatgcatgattaagaagttgaagttgcatttatcgagtttaagttgttgtagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 44382627  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  44382626 atgaagaactatgtgaagtattaatatttattaatc 44382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14220217 - 14220351
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14220217 cacatgcatgattaagaagttgtagttgcattgttgagtcgaagtcactgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 14220316  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     | | ||| ||||||||||||||||||||||||||    
T  14220317 cgtaaaactatgtgaagtattaatatttattaatc 14220351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13150742 - 13150877
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  13150742 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcattgtcgttaagttgtaatttatcaatgagttgtta 13150841  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  13150842 atgaagaactatgtgaagtattaatatttattaatc 13150877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 12371189 - 12371055
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||| |||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12371189 acatggatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgttaa 12371090  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  12371089 tgaagaactatgtgaagtattaatatttattaatc 12371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32434795 - 32434930
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  || |||  |||| ||||  ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  32434795 cacatgcatgattaagaagttgaagttgcatttgtcaagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttattaatgagttgtta 32434894  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  32434895 atgaagaactatgtgaagtattaatatttattaatc 32434930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 17071378 - 17071510
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  17071378 cacatgcatgattaagaagatgtagttgcattgtcgagttgaagtcgtagatgttgcatagtcgttgtcgttaagttgtcatttatcaatgagttgttaa 17071477  T
Q  101 tgaagaaccatgtgaagtattaatatttattaa 133  Q
    | | |||| ||||||| ||||||||||||||||    
T  17071478 taaggaactatgtgaactattaatatttattaa 17071510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17130872 - 17130975
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  17130872 cacatgcatgattaagaagttgaagttgcattgtcgagtcgaagttgttgatgtcgcattgtcgttgtcattaagttgtcatttttcaatgagttgttaa 17130971  T
Q  101 tgaa 104  Q
    ||||    
T  17130972 tgaa 17130975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20619131 - 20618996
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  20619131 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 20619032  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||| ||| || |||||||||||||||| ||||||    
T  20619031 atgaataactatttgaagtattaatattttttaatc 20618996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 11066314 - 11066179
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| |||   |||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  11066314 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttaaagtcgcattgttgttttcgttaagttgtagtttatcaatgagttgtta 11066215  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11066214 atgaagaactatgtgaagtattaatatttattaatc 11066179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 48811725 - 48811590
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  48811725 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgtcgttaagttgtcaattatcaatgagttgtta 48811626  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  48811625 ataaagaactaagtgaagtattaatatttattaatc 48811590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 15120490 - 15120616
Alignment:
Q  10 gattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaac 108  Q
    |||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||    
T  15120490 gattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgttatttatcaatgagttattaatgaaaaac 15120589  T
Q  109 catgtgaagtattaatatttattaatc 135  Q
     ||||||||||||||||||||||||||    
T  15120590 tatgtgaagtattaatatttattaatc 15120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10660383 - 10660504
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  10660383 cacatgcatgattaagaagttgaagttgcattatcgagttaaagttgttgatgtcgcattgtcgttgtctttaagttgtcatttttcaatgagttattaa 10660482  T
Q  101 tgaagaaccatgtgaagtatta 122  Q
    ||||| |  |||||||| ||||    
T  10660483 tgaagtattatgtgaagaatta 10660504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30821980 - 30822115
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| ||    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  30821980 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtaaaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 30822079  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  30822080 ataaagaactaagtgaagtattaatatttattaatc 30822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36705798 - 36705933
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||| |||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||| |||||||||||||||||||||    
T  36705798 cacaagcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttatcatttatcaatgagttgtta 36705897  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| ||||||| ||||||||||||||||||    
T  36705898 ataaagaactatgtgaattattaatatttattaatc 36705933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 11053568 - 11053466
Alignment:
Q  3 catgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatg 102  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  11053568 catgcatgattaagaagttgtagttgcattgtcgagttgaagtcgttgatgttgcattgtcgttgtcgttaagttgtcatttttcaacgagttgttaatg 11053469  T
Q  103 aag 105  Q
    |||    
T  11053468 aag 11053466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14162049 - 14162184
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  14162049 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 14162148  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || || ||| | ||||| ||||||||||||||||||    
T  14162149 ataaataactaagtgaaatattaatatttattaatc 14162184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36686365 - 36686500
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  36686365 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcatcgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 36686464  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||  ||||| | ||||||||||||||||||||||||    
T  36686465 atagagaactaagtgaagtattaatatttattaatc 36686500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37785487 - 37785615
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| | ||||||| |||| ||||||||| || |||||||||||      ||||||||||||||||||||||||||||||||    
T  37785487 cacatgcatgattaagaagttgtatttgcattgtcgattcgaagtcgctgatgtcgcattgt------cgttaagttgtcatttatcaatgagttgttaa 37785580  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||| |||||||||| |||||||||||    
T  37785581 cgaagaactatgagaagtattaacatttattaatc 37785615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 13133679 - 13133781
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  13133679 gttgcattgtcgagtggatgtcgttgttgtcacattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaaatatgtgaagtattaat 13133778  T
Q  125 att 127  Q
    |||    
T  13133779 att 13133781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15281182 - 15281056
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||| | |||||| |||||||| ||||||    
T  15281182 cacatgcatgattaagaaattgtagttgcattgtcgagttgaagtcgttgatgtcgcattgtcgttgtcgttaagctatcatttttcaatgagctgttaa 15281083  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || ||||| |||| ||||    
T  15281082 tgaagtactatatgaagaattattatt 15281056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 19281964 - 19281831
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||| |||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| |||||||||||||||    
T  19281964 acatgcatgatta-gaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgttaa 19281866  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||| ||||||||||||||||||||||    
T  19281865 tgaagaactatgcgaagtattaatatttattaatc 19281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33000882 - 33000756
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| || || |||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  33000882 cacatgcatgattaagaagttgtagttgcattgtcgagttgaggttgttgatgtcgcattatcgttgtcgttaagttgtcatttttcaatgagttattaa 33000783  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    | ||| || || ||||| |||| ||||    
T  33000782 taaagtactatatgaagaattattatt 33000756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37728032 - 37728167
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||| || |||| | ||||||  |||| || |  || ||||||||||||||||| ||||||||||| ||||||||||||||    
T  37728032 cacatgcatgattaagaagttgaggtggcatatgtcgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttgtta 37728131  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||| ||||||||||||||||    
T  37728132 ataaagaactaagtgaagtgttaatatttattaatc 37728167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 14270559 - 14270635
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  14270559 ttgtcgttgtcgttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 14270635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43277908 - 43278043
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||| || |||||||||||||| ||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  43277908 cacatgcattataaagaagttgaagttacatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 43278007  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||  | | ||||||||||||||||||||||    
T  43278008 ataaagaaataagagaagtattaatatttattaatc 43278043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 10064251 - 10064327
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  10064251 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 10064327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 15623883 - 15623783
Alignment:
Q  27 tgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatat 126  Q
    |||||| |||||| || |||| || ||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||| || ||||||||||||||    
T  15623883 tgcattgtcgagttgatgtcgctgttgtcgcattgtcgttgttgttaagttgtcaattatcaataaattgttaatgaagaactatatgaagtattaatat 15623784  T
Q  127 t 127  Q
    |    
T  15623783 t 15623783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 18423404 - 18423328
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  18423404 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 18423328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 6170597 - 6170732
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||||||| || | | ||||  |||| || |  || |||||||||||||| || |||||||||||  |||| ||||||||    
T  6170597 cacatgcatgattaagaagttgaagttgtatatgttgagtttaagttgtagaagttgcattgtcgttgtcattgagttgtcattttccaataagttgtta 6170696  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  6170697 ataaagaactaagtgaagtattaatatttattaatc 6170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18876014 - 18876148
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  || |  | |  |||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  18876014 cacatgcatgattaagaagttgaagttgcatatgttgagtttaattt-tagaagtcgcaatgtcgttgttgttaagttgtcatttgtcaatgagttgtta 18876112  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||  ||||| | ||||||||||||||||||||||||    
T  18876113 atagagaactaagtgaagtattaatatttattaatc 18876148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 17232225 - 17232150
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaat 134  Q
    ||||| |||||||||||||||||||| ||| |||||||||||| |||||| | |||||||||||||||||||||||    
T  17232225 ttgtcattgtcgttaagttgtcatttgtcactgagttgttaattaagaactaagtgaagtattaatatttattaat 17232150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22001373 - 22001499
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  ||||  |||||||| | |||| || |||| || ||||||||||||||||| || ||||||||| |||  |||||||||||||    
T  22001373 cacatgcatgattaagttgttgttgttgcattgttgagttgatgtcgatgttgtcgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaa 22001472  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||  ||| ||||||||||| ||||||    
T  22001473 tgagaaactatgtgaagtataaatatt 22001499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 45848150 - 45848224
Alignment:
Q  61 gtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||| |||| |||||||| || |||||| | ||||||||||||||||||||||||    
T  45848150 gtcgttgtcgttaagttgtcatttgtcaacgagttgttgataaagaactaagtgaagtattaatatttattaatc 45848224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 18639961 - 18639892
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatattt 128  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | |||||||||||||||||    
T  18639961 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatattt 18639892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12128303 - 12128394
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatg 91  Q
    |||||||||||||||||||||||||||| |||  || |||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||    
T  12128303 cacatgcatgattaagaagttgaagttgtatttgtcaagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatg 12128394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4070646 - 4070529
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||| |||| ||||||||||||         |||||| ||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  4070646 cacatgcatgattaagatgttgtagttgcattatc---------tcgttgatgtcgcattgtcgttgttgttaagttgtcatttatcaaagagatgttaa 4070556  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    | ||| || || ||||| |||| ||||    
T  4070555 ttaagtactatatgaagaattattatt 4070529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15139014 - 15138888
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  ||||  |||||||| |||| | || |||| || || |||||||||||||| || ||||||||| |||  |||||||||||||    
T  15139014 cacatgcatgattaagttgttgtcgttgcattgtcgaattgatgtcgatgttgccgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaa 15138915  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||  ||| ||||||||||| ||||||    
T  15138914 tgagaaactatgtgaagtatcaatatt 15138888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 8468084 - 8468024
Alignment:
Q  75 gttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  8468084 gttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 8468024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 16075985 - 16075882
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcat-ttatcaatgagttgttaatgaagaaccatgtgaagtattaa 123  Q
    |||||||| |||| | ||| |||||| |||||||| |||||||| |||||||| |||  |||||||||||||||||||||||||| || ||||| ||| |    
T  16075985 gttgcattgtcgacttgaattcgttgttgtcgcatggtcgttgttgttaagttatcaaattatcaatgagttgttaatgaagaactatatgaagaattga 16075886  T
Q  124 tatt 127  Q
    ||||    
T  16075885 tatt 16075882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 9744237 - 9744338
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| || ||| || |||| || |||| |||||||||||| || ||||||||| |||  ||||||||||||||| ||||| ||||||||||| |||    
T  9744237 gttgcattgtcaagttgatgtcgatgttgtcacattgtcgttgttgtcaagttgtcaattactaatgagttgttaatg-agaactatgtgaagtatcaat 9744335  T
Q  125 att 127  Q
    |||    
T  9744336 att 9744338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16579362 - 16579313
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  16579362 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 16579313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16586300 - 16586349
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  16586300 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 16586349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32300888 - 32300839
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||    
T  32300888 cacatgcatgattaagaagttgaagttgcattgttgagtcaaagtcgttg 32300839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 48214598 - 48214667
Alignment:
Q  52 tgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtatt 121  Q
    ||||||||||||||||| || ||||||||| |||  ||||||||||||||||  ||| ||||||||||||    
T  48214598 tgtcgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatt 48214667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 9390234 - 9390300
Alignment:
Q  61 gtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||| ||  | |||||||||| ||||    
T  9390234 gtcgttgtctttaagttgacatttttcaatgagttgttaatgaagtactttatgaagtattattatt 9390300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 12757354 - 12757400
Alignment:
Q  89 atgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  12757354 atgagttgttaataaagaactaagtgaagtattaatatttattaatc 12757400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8136220 - 8136342
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| |||||| || |||||||  |||||||||||||||| || |||||     |||  || ||||||||||    
T  8136220 cacatgcatgtttaagtcgttgttgttgcattgtcgagttgacgtcgttgtggtcgcattgtcgttgttgtcaagtt----attactaaagagttgttaa 8136315  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||  ||| ||||||||||||||||||    
T  8136316 tgagaaactatgtgaagtattaatatt 8136342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9390191 - 9390240
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||||||||||||||  || ||| ||||||||||    
T  9390191 cacatgcatgattaagaagttgaagttgcatagtcaagttgaagtcgttg 9390240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 15439318 - 15439269
Alignment:
Q  86 tcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||| |||||||| |||||| | ||||||||||||||||||||||||    
T  15439318 tcaatgacttgttaataaagaactaagtgaagtattaatatttattaatc 15439269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16461470 - 16461519
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| | ||||| |||||||||    
T  16461470 cacatgcatgattaagaagtcgaagttgcattgttgagtcaaagtcgttg 16461519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16585261 - 16585212
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||| | ||||||||||| ||||||| |||||||||    
T  16585261 cacatgcatgattaagaattcgaagttgcattgtcgagtcaaagtcgttg 16585212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14183789 - 14183837
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgtt 49  Q
    |||||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  14183789 cacatgcatgattaagaagtcgaagtttcattgtcgagtcaaagtcgtt 14183837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 19558510 - 19558578
Alignment:
Q  60 tgtcgttgtcgttaagttgtc-atttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||||| ||||||||||| |  ||||||||||||||||||||||||| |  ||||| |||||||||    
T  19558510 tgtcgttgttgttaagttgtcgaaatatcaatgagttgttaatgaagaactacatgaagaattaatatt 19558578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15120452 - 15120483
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  15120452 cacatgcatgattaagaagttgaagttgcatt 15120483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 3286891 - 3286861
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat 31  Q
    |||||||||||||||||||||||||||||||    
T  3286891 cacatgcatgattaagaagttgaagttgcat 3286861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 15105297 - 15105371
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||| |||| | || ||||||| ||| ||||||||||||| || ||||||||| |||  ||||||||||||    
T  15105297 gttgcattgtcgacttgatgtcgttgttgttgcattgtcgttgttgtcaagttgtcaattactaatgagttgtta 15105371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 16458752 - 16458706
Alignment:
Q  89 atgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||| |||||| | | ||||||||||||||||||||||    
T  16458752 atgagttgttaataaagaactaagggaagtattaatatttattaatc 16458706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20585309 - 20585264
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtc 46  Q
    |||||||||||||||||||| ||| ||||||| ||||||| |||||    
T  20585309 cacatgcatgattaagaagtcgaatttgcattgtcgagtcaaagtc 20585264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 8468119 - 8468091
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgc 29  Q
    |||||||||||||||||||||||||||||    
T  8468119 cacatgcatgattaagaagttgaagttgc 8468091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 9e-54; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 22349518 - 22349388
Alignment:
Q  4 atgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 103  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22349518 atgcatgattaagaagttgaagttgcattgtcgagtcgaagtcgttgatgtcgcattgtcgttgtcattaagttgtcatttatcaatgagttgttaatga 22349419  T
Q  104 agaaccatgtgaagtattaatatttattaat 134  Q
    ||||| || ||||| ||||||||||||||||    
T  22349418 agaactatttgaagaattaatatttattaat 22349388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1642407 - 1642273
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1642407 cacatgcatgattaagaagttgtagttgcattgtcgagtcgaagtcgatgatgtcgcattgttgttgtcgttaagttgtcatttatcaatgagttgttaa 1642308  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||||||||||||||||||| ||||||    
T  1642307 cgaagaactatgtgaagtattaatattttttaatc 1642273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 24723757 - 24723879
Alignment:
Q  13 taagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatg 112  Q
    |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24723757 taagtagttgaagttgcattgtcgagtcgaagtcgttgatgttgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaactatg 24723856  T
Q  113 tgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||    
T  24723857 tgaagtattaatatttattaatc 24723879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8277081 - 8277215
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || | |||||||||||||| |||||||| | ||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  8277081 cacatgcatgattaagaagatgtaattgcattatcgagttgaagtcgtagatgttgcatagtcgttgtcgttaagttgtcatttatcaatgagttgttaa 8277180  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  8277181 tgaagaactatgtgaagtattaatatttattaatc 8277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 51475939 - 51475805
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  51475939 cacatgcatgattaagaagttgtagttgcatcgtcgagtcgaagtcgctgatgtcgcattgtcgttgtcgttaatttgtcatttatcaatgagttgttaa 51475840  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||| |||||||||| |||||||||||    
T  51475839 cgaagaactatgagaagtattaacatttattaatc 51475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41227857 - 41227992
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||| | |||||||||||||||||||    
T  41227857 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttataatttatcaatgagttgtta 41227956  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  41227957 atgaagaactatgtgaagtattaatatttattaatc 41227992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 38888237 - 38888372
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  38888237 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 38888336  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| ||||||||||||||||||||||||||    
T  38888337 ataaagaactatgtgaagtattaatatttattaatc 38888372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16059493 - 16059628
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  16059493 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 16059592  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | | ||||||||||||||||||||||    
T  16059593 ataaagaactaagcgaagtattaatatttattaatc 16059628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20634738 - 20634873
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| |||| | ||| |||    
T  20634738 cacatgcatgattaagaagttgaagttgcatatgtagagttaaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaacgtgttatta 20634837  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20634838 atgaagaactatgtgaagtattaatatttattaatc 20634873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43542744 - 43542621
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  | ||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  43542744 cacatgcatgattaagaagttgaagttgcatttgttgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 43542645  T
Q  100 atgaagaaccatgtgaagtattaa 123  Q
    ||||||||| ||| ||||||||||    
T  43542644 atgaagaactatgcgaagtattaa 43542621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 14793587 - 14793689
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14793587 gttgcattgtcgagttgatgtcgttattgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaat 14793686  T
Q  125 att 127  Q
    |||    
T  14793687 att 14793689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 17904236 - 17904338
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  17904236 gttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtatcaat 17904335  T
Q  125 att 127  Q
    |||    
T  17904336 att 17904338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7322079 - 7322205
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| |||||| || ||||||| ||||||||||||||||| |||| ||||||| |||||||||| |||||||    
T  7322079 cacatgcatgtttaagtcgttgttgttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttatgttgtcaattatcaatgaattgttaa 7322178  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||||| ||||||||||||||||||    
T  7322179 tgaagaactatgtgaagtattaatatt 7322205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28194944 - 28195079
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| |||||||||||  |||||||||||||    
T  28194944 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgccaatgagttgtta 28195043  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  28195044 ataaagaactaagtgaagtattaatatttattaatc 28195079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 42696643 - 42696537
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatt--tatcaatgagttgtt 98  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||||| |||||||||||||  | |||||||||| ||    
T  42696643 cacatgcatgattaagaagttgaagttgcatagtcgagtcgaagttgttgatgtcgcattgtcgttgtctttaagttgtcattgctttcaatgagttatt 42696544  T
Q  99 aatgaag 105  Q
    |||||||    
T  42696543 aatgaag 42696537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 51323245 - 51323146
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  51323245 gttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgtcgataagttgtcaattatcaatgagttgttagtgaagaactatgtgaagtattaat 51323146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20587618 - 20587485
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||| |||||| | | ||||  |||| || |  |||||||||||||||| ||||||||||||||| |||||||| |  ||    
T  20587618 cacatgcatgattaagaagttgaatttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgttgttaagttgtcatttgtcaatgagat--ta 20587521  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20587520 atgaagaactatgtgaagtattaatatttattaatc 20587485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20592156 - 20592023
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||| |||||| | | ||||  |||| || |  |||||||||||||||| ||||||||||||||| |||||||| |  ||    
T  20592156 cacatgcatgattaagaagttgaatttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgttgttaagttgtcatttgtcaatgagat--ta 20592059  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20592058 atgaagaactatgtgaagtattaatatttattaatc 20592023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20636531 - 20636396
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||||||||||||| || | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| ||||||||||||||    
T  20636531 cacatgcatgattaagaagttgaagttgtatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttgtta 20636432  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||| ||||||||||||||||    
T  20636431 ataaagaactaagtgaagtgttaatatttattaatc 20636396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7053175 - 7053304
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||  |||| || |  |||||      ||||||||||||||||||||| ||||||||||||||    
T  7053175 cacatgcatgattaagaagttgaagttgcatatattgagtttaagttgtagaagtcgc------gttgtcgttaagttgtcatttgtcaatgagttgtta 7053268  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  7053269 ataaagaactaagtgaagtattaatatttattaatc 7053304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 21238640 - 21238537
Alignment:
Q  24 agttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaa 123  Q
    ||||||||| |||||  || ||||||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||||||| || ||||| |||||    
T  21238640 agttgcattgtcgaggtgatgtcgttgttgtcgcattgacgttgttgttaagttgtcaattatcaatgagttgttaatgaagaactatatgaagaattaa 21238541  T
Q  124 tatt 127  Q
    ||||    
T  21238540 tatt 21238537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 41306112 - 41306187
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaat 134  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | |||||||||||||||||||||||    
T  41306112 ttgtcgttgtcgttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaat 41306187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35982174 - 35982299
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||  || ||| ||||||||||  || |||||||||||||| |||||||| ||||| |||||||||||||||    
T  35982174 cacatgcatgattaagaagttgaagttgcatagtcaagttgaagtcgttgaagttgcattgtcgttgtctttaagttgacattt-tcaatgagttgttaa 35982272  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    | ||| ||  | |||||||||| ||||    
T  35982273 taaagtactttatgaagtattattatt 35982299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 38057778 - 38057910
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||| ||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| ||| |||||||||||    
T  38057778 acatgcatgattaagaagttgaagtttcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcactgagttgttaa 38057877  T
Q  101 tgaagaaccatgtgaagtattaatatttattaa 133  Q
    | | |||| |  |||||||||||||||||||||    
T  38057878 taaggaactacctgaagtattaatatttattaa 38057910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45754380 - 45754312
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtc 69  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  45754380 cacatgcatgattaagaagttgaagttgcattgtcgagtcgaagtcgttaatgtcgcattgtcgttgtc 45754312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 46383074 - 46383150
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  46383074 ttgtcgttatcgttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 46383150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 43690459 - 43690380
Alignment:
Q  56 gcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||| ||||||||||||||||    
T  43690459 gcattgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtgttaatatttattaatc 43690380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 13301682 - 13301618
Alignment:
Q  60 tgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    ||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  13301682 tgtcgttgttgttaagttgtcaattatcaatgagttgctaatgaagaactatgtgaagtattaat 13301618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24726249 - 24726145
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||| |||||||||||||||||||||||||| ||||||  ||   |||| ||||||||| |||| ||| |||||||||| ||| |||||||||| ||||    
T  24726249 cacattcatgattaagaagttgaagttgcattgtcgagtttaataagttgatgtcgcattatcgtagtctttaagttgtcgtttttcaatgagttattaa 24726150  T
Q  101 tgaag 105  Q
    |||||    
T  24726149 tgaag 24726145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19762288 - 19762393
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||| |||||||||||||||||||||||||  | ||||  |||| || |  |||||||||||||||||||||||||||||||| | ||| |||| ||     
T  19762288 cacatggatgattaagaagttgaagttgcatttgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtaaataagttattg 19762387  T
Q  100 atgaag 105  Q
    ||||||    
T  19762388 atgaag 19762393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4597024 - 4597073
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  4597024 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 4597073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14238665 - 14238714
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  14238665 cacatgcatgattaagaagttgaagttgtattgtcgagtcaaagtcgttg 14238714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19675626 - 19675577
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  19675626 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 19675577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20241702 - 20241653
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  20241702 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 20241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42911924 - 42911875
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  42911924 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 42911875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43697000 - 43696916
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcattt 84  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| |||||||||||    
T  43697000 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcattt 43696916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 6e-52; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 40229404 - 40229273
Alignment:
Q  4 atgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 103  Q
    |||||| |||||||||||||||||||||| |||||| |||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40229404 atgcataattaagaagttgaagttgcattgtcgagtagaagtcgtagatgacgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 40229305  T
Q  104 agaaccatgtgaagtattaatatttattaatc 135  Q
    ||||| ||||||||||||||||||||||||||    
T  40229304 agaactatgtgaagtattaatatttattaatc 40229273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19734261 - 19734127
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  19734261 cacatgcatgattaagaagttgtagttgcattgtcgagtcgaagtcgctgacgtcgcattgtcgttgttgttaagttgtcatttatcaatgaattgttaa 19734162  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||||||||||||||||||||||||||    
T  19734161 cgaagaactatgtgaagtattaatatttattaatc 19734127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 10357648 - 10357780
Alignment:
Q  4 atgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatg 102  Q
    ||||||||||||||| |||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10357648 atgcatgattaagaaattgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgttaatg 10357747  T
Q  103 aagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||| ||||||||||||||||||||||||||    
T  10357748 aagaactatgtgaagtattaatatttattaatc 10357780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 51992447 - 51992312
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  51992447 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtctttgtcgttaagttgtcatttatcaatgagttgtta 51992348  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| ||||||||||||||||||||||||||    
T  51992347 ataaagaactatgtgaagtattaatatttattaatc 51992312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 14629640 - 14629532
Alignment:
Q  19 gttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagt 118  Q
    |||| ||||||||| |||||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14629640 gttgtagttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagt 14629541  T
Q  119 attaatatt 127  Q
    |||||||||    
T  14629540 attaatatt 14629532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21061448 - 21061344
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21061448 cacatgcatgattaagaagttgtagttgcattgtcgagttgaagtggttgatgtcgcattgtcgttgtcgttaagttgtcatttttcaatgagttgttaa 21061349  T
Q  101 tgaag 105  Q
    |||||    
T  21061348 tgaag 21061344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13036930 - 13037065
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| ||||||||||||||    
T  13036930 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 13037029  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  13037030 ataaagaactaagtgaagtattaatatttattaatc 13037065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20445 - 20342
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||| |||||| ||||||| |||||||||| ||||    
T  20445 cacatgcatgattaagaagttgaagttgcattgtcgagtagaagttgttgatgtcgcattgtcgttgtctttaagtggtcatttctcaatgagttattaa 20346  T
Q  101 tgaa 104  Q
    ||||    
T  20345 tgaa 20342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9637781 - 9637646
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  | ||||||||||||||||||||||||||| || ||||||||||||||    
T  9637781 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagccgcattgtcgttgtcgttaagttgtcaattgtcaatgagttgtta 9637682  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  9637681 ataaagaactaagtgaagtattaatatttattaatc 9637646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19435888 - 19436023
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  19435888 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgataagttgtcatttgtcaatgagttgtta 19435987  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | |||||||||||||| |||||||||    
T  19435988 ataaagaactaagtgaagtattaatacttattaatc 19436023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 33244357 - 33244492
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  33244357 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcattgagttgtta 33244456  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  33244457 ataaagaactaagtgaagtattaatatttattaatc 33244492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 46642523 - 46642388
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| ||||||||||||||    
T  46642523 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttgtta 46642424  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  46642423 ataaagaactaagtgaagtattaatatttattaatc 46642388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 15189977 - 15189844
Alignment:
Q  3 catgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaat 101  Q
    ||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  15189977 catgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgtcaatgagttgttaat 15189878  T
Q  102 gaagaaccatgtgaagtattaatatttattaatc 135  Q
     |||||| | |||||||||||||||||| |||||    
T  15189877 aaagaactaagtgaagtattaatatttaataatc 15189844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15608216 - 15608095
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| |||||||||||| ||||||  |||| |||| |||||||||||||||||| |||||| ||||||| |||||||||| ||||    
T  15608216 cacatgcatgattaagaagatgaagttgcattgtcgagttaaagttgttgatgtcgcattgtcgttgtctttaagtcgtcatttttcaatgagttattaa 15608117  T
Q  101 tgaagaaccatgtgaagtatta 122  Q
    ||||| || || ||||| ||||    
T  15608116 tgaagtactatatgaagaatta 15608095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 26922878 - 26922980
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||| ||| |||||| || ||||||| ||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  26922878 gttgtattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttaggttgtcaattatcaatgagttgttaatgaagaactatgtgaaatattaat 26922977  T
Q  125 att 127  Q
    |||    
T  26922978 att 26922980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 124
Target Start/End: Original strand, 44024640 - 44024717
Alignment:
Q  47 gttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44024640 gttgttgttgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagtattaat 44024717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 16296424 - 16296290
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||| | | ||||  |||| || |   |  |||||||| ||||||||||||||||||| ||| |||||||||||    
T  16296424 acatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaattttcattgtcgatgtcgttaagttgtcatttgtcactgagttgttaa 16296325  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    | |||||| | ||||||||||||||||||||||||    
T  16296324 taaagaactaagtgaagtattaatatttattaatc 16296290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26444790 - 26444664
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||||  || ||||||| ||| ||||||||||||| |||||||||||| |||  |||||||||||||    
T  26444790 cacatgcatgattaagttgttgtagttgcattgtcgagatgatgtcgttgttgttgcattgtcgttgttgttaagttgtcaattactaatgagttgttaa 26444691  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||  ||| ||||||||||| ||||||    
T  26444690 tgagaaactatgtgaagtatcaatatt 26444664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 40906652 - 40906542
Alignment:
Q  12 ttaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccat 111  Q
    ||||||||||||||||||||| || ||||||||| |||  |||||||||||||||||| ||||||||| |||  ||||||| |||||| |||||||| ||    
T  40906652 ttaagaagttgaagttgcattgtcaagtcgaagttgttaatgtcgcattgtcgttgtcattaagttgtgattgttcaatgaattgttattgaagaactat 40906553  T
Q  112 gtgaagtatta 122  Q
    ||| |||||||    
T  40906552 gtggagtatta 40906542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 7641630 - 7641706
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  7641630 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 7641706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 13844229 - 13844094
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||| |||||||||||| | | ||||  |||| || |  || ||||||||||||||||  ||||||||||| |||||||||| |||    
T  13844229 cacatgcatgattaagaaattgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgtagagttgtcatttgtcaatgagttatta 13844130  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||| ||||||||||||||||    
T  13844129 ataaagaactaagtgaagtgttaatatttattaatc 13844094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 15355770 - 15355846
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | |||||||| |||||||||||||||    
T  15355770 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtagtaatatttattaatc 15355846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 19857178 - 19857102
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    ||||||||||||||||||||||||    
T  19857178 ttgtcgttgtcgttaagttgtcatttgtcaatgagttgttaataaagaagttagtgaagtattaatatttattaatc 19857102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 44773560 - 44773636
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| | ||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  44773560 ttgtcgttgtcgttgaattgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 44773636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50159937 - 50159833
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| |||| |||||||| | ||||||||||| |||| || |||||||||    
T  50159937 cacatgcatgattaagaaggtgtagttgcattgtcgagttgaagtcgtagatgttgcatagtcgttgttgataagttgtcatatatccataagttgttaa 50159838  T
Q  101 tgaag 105  Q
    |||||    
T  50159837 tgaag 50159833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 105
Target Start/End: Original strand, 32467383 - 32467476
Alignment:
Q  12 ttaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaag 105  Q
    ||||||||||||||||||||| ||||||  |||  |||| |||||||||||||| ||| |||||||||||||| |||||||||| | |||||||    
T  32467383 ttaagaagttgaagttgcattgtcgagtttaagaagttgatgtcgcattgtcgtagtctttaagttgtcatttttcaatgagttatcaatgaag 32467476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 361851 - 361775
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||| ||||||||||||||||||||| ||||| ||||||| || |||||| | ||||| ||||||||||||||||||    
T  361851 ttgttgttgtcgttaagttgtcatttgtcaataagttgttcataaagaactaagtgaaatattaatatttattaatc 361775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15364846 - 15364746
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||| | | ||| ||||||||||||| | ||||||||| | |||| ||||||||||||    
T  15364846 cacatgcatgattaagaagatgtagttgcatagtcgagttgaagtcttagatgttgcattgtcgttgttgataagttgtcgtctatccatgagttgttaa 15364747  T
Q  101 t 101  Q
    |    
T  15364746 t 15364746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19736418 - 19736316
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||  || ||| |||||| | | ||||||||||||||||| | ||||||||| | |||| |||| |||||||    
T  19736418 cacatgcatgattaagaagatgtagttgcatagtcaagttgaagtcttagatgtcgcattgtcgttgttgataagttgtcgtctatccatgaattgttaa 19736319  T
Q  101 tga 103  Q
    |||    
T  19736318 tga 19736316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 15098900 - 15098830
Alignment:
Q  57 cattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||||| ||  | |||||||||| ||||    
T  15098900 cattgtcgttgtctttaagttgacatttttcaatgagttgttaatgaagtactttatgaagtattattatt 15098830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 46740053 - 46739951
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || |||| || |||| |||||||||||| || ||||||||| |||  | ||||||||||||||  ||| ||||||||||| |||    
T  46740053 gttgcattgtcgagttgatgtcgatgttgtcacattgtcgttgttgtcaagttgtcaattactagtgagttgttaatgagaaactatgtgaagtatcaat 46739954  T
Q  125 att 127  Q
    |||    
T  46739953 att 46739951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3484910 - 3484861
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  3484910 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 3484861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14548585 - 14548536
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  14548585 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 14548536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15042293 - 15042342
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  15042293 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 15042342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15112131 - 15112082
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  15112131 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 15112082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35812602 - 35812651
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  35812602 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 35812651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 35659619 - 35659544
Alignment:
Q  52 tgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||||||||||||| || |||| |||| |||  ||||||||||||||||  ||| ||||||||||| ||||||    
T  35659619 tgtcgcattgtcgttgttgtcaagtcgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaatatt 35659544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 14650492 - 14650446
Alignment:
Q  4 atgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  14650492 atgcatgattaagaagttgaaattgcattgtcgagtcaaagtcgttg 14650446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 27995688 - 27995590
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||  || ||||||||  || ||| |||||| | | ||| ||||||||||||| | ||||||||| | |||| |||||||||||    
T  27995688 cacatgcatgattaagaaaatgtagttgcatagtcaagttgaagtcttagatgttgcattgtcgttgttgataagttgtcgtctatccatgagttgtta 27995590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32467344 - 32467382
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagt 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  32467344 cacatgcatgattaagaagttgaagttgcattgtcgagt 32467382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16997400 - 16997351
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||| | ||||||| |||||||||    
T  16997400 cacatgcatgattaagaagtcgaagttgcactgtcgagtcaaagtcgttg 16997351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25090527 - 25090478
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||| |||||||||| ||||||||||| ||||||| |||||||||    
T  25090527 cacatgcataattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 25090478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37018466 - 37018417
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||| ||| ||||||| |||||||||    
T  37018466 cacatgcatgattaagaagtcgaagttgtattgtcgagtcaaagtcgttg 37018417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42874672 - 42874623
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  42874672 cacatgcatgattaagaagtcgaagttgcattgtcgaatcaaagtcgttg 42874623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 4859030 - 4859076
Alignment:
Q  89 atgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||| |||||  | ||||||||||||||||||||||||    
T  4859030 atgagttgttaataaagaattaagtgaagtattaatatttattaatc 4859076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 15098975 - 15098945
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat 31  Q
    |||||||||||||||||||||||||||||||    
T  15098975 cacatgcatgattaagaagttgaagttgcat 15098945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40906692 - 40906654
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagt 39  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  40906692 cacatgcatgattaagatgtagaagttgcattatcgagt 40906654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 361881 - 361853
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgc 29  Q
    |||||||||||||||||||||||||||||    
T  361881 cacatgcatgattaagaagttgaagttgc 361853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 19857208 - 19857180
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgc 29  Q
    |||||||||||||||||||||||||||||    
T  19857208 cacatgcatgattaagaagttgaagttgc 19857180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7233 - 7099
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7233 cacatgcatgattaagaagttgcagttgcattgtcgagtcgaagtcgctgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 7134  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
      |||||| ||||||||| ||||||||||||||||    
T  7133 caaagaactatgtgaagttttaatatttattaatc 7099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26761350 - 26761215
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  26761350 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 26761251  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  26761250 atgaagaactatgtgaagtattaatatttattaatc 26761215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20565340 - 20565206
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||| | |  ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20565340 cacatgcatgattaagaagttgtagttgtagtgacgagtcgaattcgctgatgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 20565241  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||||||||||||||||||||||||||    
T  20565240 cgaagaactatgtgaagtattaatatttattaatc 20565206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 16227263 - 16227128
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| |||||||||| |||    
T  16227263 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttatta 16227164  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  16227163 atgaagaactatgtgaagtattaatatttattaatc 16227128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25251023 - 25251126
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  25251023 cacatgcatgattaagaagttgaagttgcattgtcgagtcgaagtcgttgatgtcgcgttgtcgttgtcattaagttgtcatttttcaatgagttgttaa 25251122  T
Q  101 tgaa 104  Q
    ||||    
T  25251123 tgaa 25251126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 25314808 - 25314911
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  25314808 cacatgcatgattaagaagttgaagttgcattgtcgagtcgaagtcgttgatgtcgcgttgtcgttgtcattaagttgtcatttttcaatgagttgttaa 25314907  T
Q  101 tgaa 104  Q
    ||||    
T  25314908 tgaa 25314911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21406800 - 21406935
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||| |||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  21406800 cacatgcatgattaagaaattgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 21406899  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| ||||||| ||||||||||||||||||    
T  21406900 ataaagaactatgtgaaatattaatatttattaatc 21406935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12122612 - 12122747
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  12122612 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 12122711  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||  ||||| | ||||||||||||||||||||||||    
T  12122712 atagagaactaagtgaagtattaatatttattaatc 12122747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36509934 - 36510069
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  36509934 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 36510033  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | | ||||||||||||||||||||||    
T  36510034 ataaagaactaagcgaagtattaatatttattaatc 36510069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17874953 - 17874818
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||| |||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||||||| || ||||||||||||||    
T  17874953 cacatgcatgattaagaaattgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgtcgttaagttgtcaattgtcaatgagttgtta 17874854  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||  | ||||||||||||||||||||||||    
T  17874853 atgaagaattaagtgaagtattaatatttattaatc 17874818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23202870 - 23203004
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||| |||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| ||||||||||||||    
T  23202870 cacatgcatgatta-gaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 23202968  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||| ||||||    
T  23202969 atgaagaactatgtgaagtattaatattttttaatc 23203004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 5889654 - 5889789
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| |||||||||||  |||||||||||||    
T  5889654 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgccaatgagttgtta 5889753  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  5889754 ataaagaactaagtgaagtattaatatttattaatc 5889789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20470256 - 20470363
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||| |||| ||||||||  |||||| |||||| ||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  20470256 cacatgcatgattaagatgttgtagttgcatcgtcgagttgaagtctttgttgtcgcattgtcgttgttgttatgttgtcagttatcaatgagttgttaa 20470355  T
Q  101 tgaagaac 108  Q
    ||||||||    
T  20470356 tgaagaac 20470363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31455429 - 31455294
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||| |||||||||||||||||| || ||||||||||||||    
T  31455429 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgttgttgtcgttaagttgtcaattgtcaatgagttgtta 31455330  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | || |||||||||||||||||||||    
T  31455329 ataaagaactaagtaaagtattaatatttattaatc 31455294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21555494 - 21555629
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||| ||||||||| ||||||||||||| |||| ||||||||||||||    
T  21555494 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcacattgtcgtggtcgttaagttgttatttgtcaatgagttgtta 21555593  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||  ||||| | ||||||||||||||||||||||||    
T  21555594 atagagaactaggtgaagtattaatatttattaatc 21555629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21742036 - 21742171
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  || | || |  || ||||||||||||||||| |||||||||||  |||||||||||||    
T  21742036 cacatgcatgattaagaagttgaagttgcatatgttgagtttaatttgtagaagttgcattgtcgttgtcgttgagttgtcatttgccaatgagttgtta 21742135  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  21742136 ataaagaactaagtgaagtattaatatttattaatc 21742171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12354290 - 12354164
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| |||||| || || |||| ||||||||||||| ||| |||||||| ||| ||||||||||||||||||    
T  12354290 cacatgcatgtttaagtcgttgttgttgcattgtcgagttgatgtggttgttgtcgcattgtcgctgttgttaagttatcaattatcaatgagttgttaa 12354191  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||||| ||||||| ||||||||||    
T  12354190 tgaagaactatgtgaattattaatatt 12354164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25742772 - 25742668
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| ||||||||||||| ||||||||| ||| |||| ||||||||||||    
T  25742772 cacatgcatgattaagaagatgtagttgcattgtcgagttgaagtcgtagatgttgcattgtcgttgttgttaagttgccatctatccatgagttgttaa 25742673  T
Q  101 tgaag 105  Q
    |||||    
T  25742672 tgaag 25742668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31454816 - 31454681
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||| |||||||||||||||||| || | ||||||||||||    
T  31454816 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgttgttgtcgttaagttgtcaattgttaatgagttgtta 31454717  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||  | || |||||||||||||||||||||    
T  31454716 ataaagaaataagtaaagtattaatatttattaatc 31454681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 21619214 - 21619316
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| | |||| || ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||  |||| ||||||    
T  21619214 gttgcattgttgagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattatcaatgagttgttaatgaagaactatacgaagaattaat 21619313  T
Q  125 att 127  Q
    |||    
T  21619314 att 21619316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21558159 - 21558294
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  21558159 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgtttagttggcatttgtcaatgagttgtta 21558258  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||  | ||  | ||||||||||||||||||| ||||    
T  21558259 atagataattaagtgaagtattaatatttatcaatc 21558294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 39244827 - 39244755
Alignment:
Q  63 cgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  39244827 cgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 39244755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 6551675 - 6551777
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || |||| | |||||||||||||||||| || ||||||||| |||  ||||||||||||||||  ||| ||||||||||| |||    
T  6551675 gttgcattgtcgagttgatgtcgatagtgtcgcattgtcgttgttgtcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaat 6551774  T
Q  125 att 127  Q
    |||    
T  6551775 att 6551777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 10952898 - 10952793
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||||||| |||||||||||| | | ||||  |||| || |  ||||||||||| |||||||||||||||||||| |||| ||||| |||    
T  10952898 cacatgcatgattaagaatttgaagttgcataagttgagtttaagttgtagaagtcgcattgtctttgtcgttaagttgtcatttgtcaacgagttatta 10952799  T
Q  100 atgaag 105  Q
    ||||||    
T  10952798 atgaag 10952793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20198873 - 20198973
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || || |||| |||| ||||||| | || |  ||||||||| |||  || |||||||||||||  ||| |||||||||||||||    
T  20198873 gttgcattgtcgagttgatgttgttgttgtcacattgtcatcgttgacaagttgtcaattactaaggagttgttaatgagaaactatgtgaagtattaat 20198972  T
Q  125 a 125  Q
    |    
T  20198973 a 20198973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 29915511 - 29915539
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgc 29  Q
    |||||||||||||||||||||||||||||    
T  29915511 cacatgcatgattaagaagttgaagttgc 29915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19774 - 19908
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  19774 cacatgcatgattaagaagttgtagttgcattgtcgagtcgaagtcactgatgtcgtattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 19873  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     ||||||| ||| ||||||||||||||||||||||    
T  19874 cgaagaactatgagaagtattaatatttattaatc 19908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 6e-49; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23492392 - 23492526
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||||| || ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  23492392 cacatgcatgattaagttgttgtagttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttcagttgtcatttatcaatgagttgttaa 23492491  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||||||||||||||    
T  23492492 tgaagaaccatgtgaagtattaatatttattaatc 23492526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23497990 - 23498124
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||||| || ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  23497990 cacatgcatgattaagttgttgtagttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttcagttgtcatttatcaatgagttgttaa 23498089  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||||||||||||||    
T  23498090 tgaagaaccatgtgaagtattaatatttattaatc 23498124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20411907 - 20412042
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||| ||||||||||||||  ||||||  |||| ||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  20411907 cacatgcatgattaagaggttgaagttgcatttgtcgagtttaagttgttgaagtcacattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 20412006  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  20412007 atgaagaactatgtgaagtattaatatttattaatc 20412042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23017319 - 23017454
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  || |||  |||| ||||  ||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  23017319 cacatgcatgattaagaagttgaagttgcatttgtctagtttaagttgttgaagtcgcattgtcgttgtcgtcaagttgtaatttatcaacgagttgtta 23017418  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| |||||||| |||||||||||||||||    
T  23017419 atgaagaactatgtgaagaattaatatttattaatc 23017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20734560 - 20734695
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    |||||||||||||| |||||||||||||||| | | || |  |||| || |  ||||||||||||||||||||||||||||| || ||||||||||||||    
T  20734560 cacatgcatgattatgaagttgaagttgcatatgttgatttcaagttgtagaagtcgcattgtcgttgtcgttaagttgtcaattgtcaatgagttgtta 20734659  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  20734660 ataaagaactaagtgaagtattaatatttattaatc 20734695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18458244 - 18458370
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| ||||||  | ||||||| ||||||||||||| ||| ||||||||||||||||||||| ||| |||||    
T  18458244 cacatgcatgtttaagttgttgttgttgcattgtcgagttaatgtcgttgttgtcgcattgtcgctgttgttaagttgtcatttatcaataagtagttaa 18458343  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||||| ||||||||||||||||||    
T  18458344 tgaagaactatgtgaagtattaatatt 18458370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19830076 - 19830211
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  | || || |  |||||||||||| ||||||||||||||||||||||||||||||| ||    
T  19830076 cacatgcatgattaagaagttgaagttgcatatgttgagtttatgttgtagaagtcgcattgtcgctgtcgttaagttgtcatttatcaatgagttgcta 19830175  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || ||| || || | |||||||||||||||||||||    
T  19830176 ataaagtactatttaaagtattaatatttattaatc 19830211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25957116 - 25957251
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| | ||||||||||||    
T  25957116 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgttaatgagttgtta 25957215  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||| ||||||||||||||||    
T  25957216 ataaagaactaagtgaagtgttaatatttattaatc 25957251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25965163 - 25965298
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||| ||||||||||| | ||||||||||||    
T  25965163 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttgagttgtcatttgttaatgagttgtta 25965262  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||| ||||||||||||||||    
T  25965263 ataaagaactaagtgaagtgttaatatttattaatc 25965298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 31736003 - 31736129
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||| | | |||| ||||||| | |||||| |||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||||    
T  31736003 cacatgcatgatttaaatgttgtagttgcagtgtcgagttgaagtcgttgttgtcgcattgtcgttgttattaagttgtcatctatcaatgagttgttaa 31736102  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || ||||| |||| ||||    
T  31736103 tgaagtactatatgaagaattattatt 31736129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27329025 - 27329164
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaa----gttgtcatttatcaatgagtt 95  Q
    ||||||||||||||||||||||||||||||||  ||||||  ||||  |||    ||| |||||||| |||||||    ||||| |||||||||||||||    
T  27329025 cacatgcatgattaagaagttgaagttgcatttgtcgagttcaagttcttgaaaccgcgttgtcgttttcgttaattaagttgtaatttatcaatgagtt 27329124  T
Q  96 gttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  27329125 gttaatgaagaactatgcgaagtattaatatttattaatc 27329164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27389765 - 27389904
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaa----gttgtcatttatcaatgagtt 95  Q
    ||||||||||||||||||||||||||||||||  ||||||  ||||  |||    ||| |||||||| |||||||    ||||| |||||||||||||||    
T  27389765 cacatgcatgattaagaagttgaagttgcatttgtcgagttcaagttcttgaaaccgcgttgtcgttttcgttaattaagttgtaatttatcaatgagtt 27389864  T
Q  96 gttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  27389865 gttaatgaagaactatgcgaagtattaatatttattaatc 27389904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27850803 - 27850668
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||| ||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||| |||  ||||||| ||||| |||||||||| |||    
T  27850803 cacatgcataattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgtcgtcaataagttgccatttgtcaatgagttatta 27850704  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||  ||||| ||||||||||||||||||||    
T  27850703 atgaagaattatgtggagtattaatatttattaatc 27850668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 28947339 - 28947275
Alignment:
Q  60 tgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  28947339 tgtcgttgttgttaagttgtcaattatcaatgagttgttaatgaagaactatgtgaagtattaat 28947275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 19859398 - 19859474
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||| |||||| |||| |||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  19859398 ttgtcgtcgtcgttgagttttcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 19859474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 6083915 - 6084016
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| || ||| || ||||||| ||||||||||||||||| || ||||||||| |||| ||||||||||||||||| ||| | ||||||||||| |    
T  6083915 gttgcattgtcaagttgatgtcgttgttgtcgcattgtcgttgttgtcaagttgtcaattattaatgagttgttaatgaa-aactaggtgaagtattact 6084013  T
Q  125 att 127  Q
    |||    
T  6084014 att 6084016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 22556057 - 22555955
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||| |||| |||||||||||| |||||||||||| |||  ||||||||||||||||  ||| ||||||| ||| |||    
T  22556057 gttgcattgtcgagttgatgtcgttgttgtctcattgtcgttgttgttaagttgtcaattactaatgagttgttaatgagaaactatgtgaactatcaat 22555958  T
Q  125 att 127  Q
    |||    
T  22555957 att 22555955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 23083449 - 23083553
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||  | | ||| ||||||||||||| | ||||||||||| |||| |||||||||||     
T  23083449 cacatgcatgattaagaagatgtagttgcatagtcgagttgaagttttagatgttgcattgtcgttgttgataagttgtcatctatccatgagttgttac 23083548  T
Q  101 tgaag 105  Q
    |||||    
T  23083549 tgaag 23083553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22212636 - 22212715
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtc 80  Q
    ||||||||||| |||||||||||||||||||  || ||||||||| ||| ||||||||| ||||||||| |||| |||||    
T  22212636 cacatgcatgactaagaagttgaagttgcatagtcaagtcgaagttgttagtgtcgcatcgtcgttgtcattaaattgtc 22212715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 19958086 - 19958188
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || |||| || |||||||||||||||||  | ||||||||| |||  ||||||||||||||||  ||| ||||||||||| |||    
T  19958086 gttgcattgtcgagttgatgtcgatgttgtcgcattgtcgttgtgttcaagttgtcaattactaatgagttgttaatgagaaactatgtgaagtatcaat 19958185  T
Q  125 att 127  Q
    |||    
T  19958186 att 19958188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 18260302 - 18260406
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || |||| |||| || ||| |||||||| |  || |||| |||||||| | ||||||||| | |||| ||||||||||||    
T  18260302 cacatgcatgattaagaagatgtagtttcattgtcaagttgaagtcgtagaggttgcatagtcgttgttgataagttgtcgtctatccatgagttgttaa 18260401  T
Q  101 tgaag 105  Q
    |||||    
T  18260402 tgaag 18260406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22377022 - 22377125
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||| | | ||| |||| ||| |||| | ||||||||||| |||| || || ||||||    
T  22377022 cacatgcatgattaagaagatgtagttgcattgtcgagttgaagtcatagatgttgcatagtcattgttgataagttgtcatctatccataagatgttaa 22377121  T
Q  101 tgaa 104  Q
    ||||    
T  22377122 tgaa 22377125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17105437 - 17105388
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  17105437 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 17105388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19656591 - 19656640
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  19656591 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 19656640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22805537 - 22805488
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  22805537 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 22805488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 15895700 - 15895608
Alignment:
Q  13 taagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaag 105  Q
    ||||||| || ||||||||| |||||| |||||||| | ||| |||| |||||| | | ||||||||||| |||| || ||||||||||||||    
T  15895700 taagaagatgtagttgcattgtcgagttgaagtcgtagatgttgcatagtcgttattgataagttgtcatctatccataagttgttaatgaag 15895608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18453000 - 18452952
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgtt 49  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  18453000 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgtt 18452952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7825519 - 7825470
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  7825519 cacatgcatgattaagaagtcgaagttgcattgtcgaatcaaagtcgttg 7825470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27126576 - 27126625
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||| |||| ||||||||||| ||||||| |||||||||    
T  27126576 cacatgcatgattaataagtcgaagttgcattgtcgagtcaaagtcgttg 27126625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 16245119 - 16245016
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||  | ||| ||||| || ||| |||||||  | ||| |||| |||||||| | ||||||||||| |||  || |||||||||    
T  16245119 cacatgcatgattaagaagaagtagtcgcattgtcaagttgaagtcgaagatgttgcatagtcgttgttgataagttgtcatatattcataagttgttaa 16245020  T
Q  101 tgaa 104  Q
    ||||    
T  16245019 tgaa 16245016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15705906 - 15705955
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| || |||| || ||||||    
T  15705906 cacatgcatgattaagaagtcgaagttgcattgtcaagtcaaattcgttg 15705955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20078510 - 20078554
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagt 45  Q
    |||||||||||||||||| | ||||||||||| ||||||| ||||    
T  20078510 cacatgcatgattaagaaatcgaagttgcattgtcgagtcaaagt 20078554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20136452 - 20136408
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagt 45  Q
    ||||||||||||||||||| |||||||||||  || |||||||||    
T  20136452 cacatgcatgattaagaagatgaagttgcatagtcaagtcgaagt 20136408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22196417 - 22196461
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagt 45  Q
    ||||||||||||||||||| |||||||||||  || |||||||||    
T  22196417 cacatgcatgattaagaagatgaagttgcatagtcaagtcgaagt 22196461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 65215 - 65350
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||| ||  ||||||  |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  65215 cacatgcatgattaagaagttgaagttgcctttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 65314  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  65315 atgaagaactatgtgaagtattaatatttattaatc 65350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20575 - 20441
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  20575 cacatgcatgattaagaagttatagttgcattatcgagtcgaagtcgctgatgtggcattgtcgttgtcgttaagttgtcatttatctatgagttgttaa 20476  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     | | ||| ||||||||||||||||||||||||||    
T  20475 cgcaaaactatgtgaagtattaatatttattaatc 20441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 5838 - 5705
Alignment:
Q  3 catgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaat 101  Q
    |||||||||||||||| |||||||||||||  ||||||  |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5838 catgcatgattaagaatttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaat 5739  T
Q  102 gaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  5738 gaagaactatgtgaagtattaatatttattaatc 5705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 332 - 199
Alignment:
Q  3 catgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaat 101  Q
    |||||||||||||||| |||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  332 catgcatgattaagaatttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgttaat 233  T
Q  102 gaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||| ||||||||||||||||||||||||||    
T  232 gaagaactatgtgaagtattaatatttattaatc 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 13571 - 13436
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13571 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 13472  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||| ||||||||||||||||||||||    
T  13471 atgaagaactatgcgaagtattaatatttattaatc 13436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 78516 - 78651
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  78516 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttatta 78615  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| | ||||||||||||||||||||||||    
T  78616 atgaagaactacgtgaagtattaatatttattaatc 78651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31755 - 31620
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  31755 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcacattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 31656  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  31655 atgaagaactatgtgaagtattaatatttattaatc 31620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 37062 - 36927
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  37062 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcacattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 36963  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  36962 atgaagaactatgtgaagtattaatatttattaatc 36927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 446269 - 446190
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtc 80  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||| | | ||| ||||||||||| | | |||||||||    
T  446269 cacatgcatgattaagaagatgtagttgcatagtcgagttgaagtcttagatgttgcattgtcgttattgataagttgtc 446190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 6852 - 6987
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  |||||||||||||| |||||||||||| |||||||||||| ||||||    
T  6852 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttatcgttaagttgtaatttatcaatgacttgtta 6951  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6952 atgaagaactatgtgaagtattaatatttattaatc 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 9968 - 10099
Alignment:
Q  5 tgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 103  Q
    ||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  9968 tgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagtttttaatga 10067  T
Q  104 agaaccatgtgaagtattaatatttattaatc 135  Q
    ||||| |||| |||||||||||||||||||||    
T  10068 agaactatgttaagtattaatatttattaatc 10099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 4158 - 4281
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||||||||||||| ||||||||| || |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  4158 cacatgcatgattaagtcgttgaagttgcattgtcgagtcgatgttgttgttgtcgcattgtcgttggtgttaagttgtcatttatcaatgagttgttaa 4257  T
Q  101 tgaagaaccatgtgaagtattaat 124  Q
     ||||||| |||||||||||||||    
T  4258 ggaagaactatgtgaagtattaat 4281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 127549 - 127675
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  127549 cacatgcatgattaagaagttgtagttgcattgtcgagttgaagtcgttgatgtcgcattgtcattgtcgttaagttgtcatttttcaatgagttgttaa 127648  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || ||||| |||| ||||    
T  127649 tgaagtactatatgaagaattattatt 127675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 525 - 417
Alignment:
Q  19 gttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagt 118  Q
    |||| ||||||||| |||||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  525 gttgtagttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagt 426  T
Q  119 attaatatt 127  Q
    |||||||||    
T  425 attaatatt 417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9508 - 9641
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  9508 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcgatgagttgtta 9607  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||  | |||||||||||||||||||||||    
T  9608 atgaagaac--tatgaagtattaatatttattaatc 9641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 187743 - 187851
Alignment:
Q  19 gttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagt 118  Q
    |||| ||||||||| |||||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  187743 gttgtagttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaatgaagaactatgtgaagt 187842  T
Q  119 attaatatt 127  Q
    |||||||||    
T  187843 attaatatt 187851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 166800 - 166846
Alignment:
Q  4 atgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  166800 atgcatgattaagaagttgaaattgcattgtcgagtcaaagtcgttg 166846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 109133 - 109026
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||| | |||| ||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  109133 cacatgcatgattaatatgttgtagttgcattgtcgagttgaagtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaa 109034  T
Q  101 tgaagaac 108  Q
    ||||||||    
T  109033 tgaagaac 109026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 11466 - 11592
Alignment:
Q  10 gattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaac 108  Q
    |||||||||||||||||||||||  ||||||  |||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  11466 gattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttgagttgtcatttatcaatgagttgttaataaagaac 11565  T
Q  109 catgtgaagtattaatatttattaatc 135  Q
     | ||||||||||||||||||||||||    
T  11566 taagtgaagtattaatatttattaatc 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 14460 - 14358
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| ||||||  | ||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||| ||||||    
T  14460 gttgcattgtcgagtttatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattatcaatgagttgttaatgacgaactatgtgaagaattaat 14361  T
Q  125 att 127  Q
    |||    
T  14360 att 14358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11428 - 11459
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatt 32  Q
    ||||||||||||||||||||||||||||||||    
T  11428 cacatgcatgattaagaagttgaagttgcatt 11459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 15648 - 15514
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  ||||||| |  |||||||||||||||||||||||||||||||| ||||||||||||||    
T  15648 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagtcgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttgtta 15549  T
Q  100 atgaagaaccatgtgaagtattaatatttattaat 134  Q
    || | |||| | |||||||||||||||||||||||    
T  15548 ataacgaactaagtgaagtattaatatttattaat 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3383 - 3248
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | || |  |||| || |  |||||| ||||||||||||||||||||||||| |||||||||| |||    
T  3383 cacatgcatgattaagaagttgaagttgcatatgttgaatttaagttgtagaagtcgcaatgtcgttgtcgttaagttgtcatttgtcaatgagttttta 3284  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | || |||||||||||||||||||||    
T  3283 ataaagaactaagtaaagtattaatatttattaatc 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 17318 - 17237
Alignment:
Q  41 gaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtatta 122  Q
    ||||| |||| |||||||||||||||||||||||||||||| || |||||||||| ||||||||| || || ||||| ||||    
T  17318 gaagttgttgatgtcgcattgtcgttgtcgttaagttgtcacttttcaatgagttattaatgaagtactatatgaagaatta 17237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 55927 - 55801
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  ||||||||||| ||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  55927 cacatgcatgtttaagttgttgttgttgcattatcaagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaa 55828  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||| | ||||||||||||||||||    
T  55827 tgaagagctatgtgaagtattaatatt 55801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 24091 - 23987
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| || |||| ||||||||||||    
T  24091 cacatgcatgatcaagaagttgaagttgcattgtcgagtcgaagtcgttgatgtcgcattgtcgttgttgttaagttgttatctatccatgagttgttaa 23992  T
Q  101 tgaag 105  Q
    |||||    
T  23991 tgaag 23987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 66197 - 66320
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||  |||| ||||||||| |||||| || ||||||| |||||||||||||||||   |||||||||||||||||||||||||||||    
T  66197 cacatgcatgattaagttgttgtagttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgt---taagttgtcatttatcaatgagttgttaa 66293  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||||| ||||||| ||||||||||    
T  66294 tgaagaactatgtgaaatattaatatt 66320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 3102 - 3221
Alignment:
Q  8 atgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaa 107  Q
    |||||||||| |||| ||||||||| |||||| |||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  3102 atgattaagatgttgtagttgcattgtcgagttgaagtcgttgttgtcgcattgttgttgttgttaagttgtcaattatcaatgagttgttaatgaagaa 3201  T
Q  108 ccatgtgaagtattaatatt 127  Q
    | || ||||| |||||||||    
T  3202 ctatatgaagaattaatatt 3221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39041 - 38906
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| |||||||| |||||    
T  39041 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagctgtta 38942  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  38941 ataaagaactaagtgaagtattaatatttattaatc 38906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 56595 - 56472
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  ||||||  |||| ||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  56595 cacatgcatgattaagaagttgaagttgcatttgtcgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtaatttatcaatgagttgtta 56496  T
Q  100 atgaagaaccatgtgaagtattaa 123  Q
    ||||||||| ||| ||| ||||||    
T  56495 atgaagaactatgagaattattaa 56472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 116703 - 116654
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  116703 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 116654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 17109 - 16975
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||| | | ||||  |||| || |  |||| |||||||||||||||||||||| |||| |||||||||| ||||    
T  17109 acatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgtattgtcgttgtcgttaagttgttatttgtcaatgagttattaa 17010  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||| ||||||||||||||||||||||||||    
T  17009 tgaagaactatgtgaagtattaatatttattaatc 16975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 17206 - 17083
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||| ||||||  ||||| |||||||| ||||||||| ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  17206 cacatgcattattaagtcgttgatgttgcattgtcgagtcgatgtcgttgttgtcgcattgtcgttgatgttaagttgtcatttatcaatgagttgttaa 17107  T
Q  101 tgaagaaccatgtgaagtattaat 124  Q
    |||| ||| | ||||| |||||||    
T  17106 tgaaaaactaagtgaaatattaat 17083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 60144 - 60041
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||| |||||| ||||||| |||||||||| ||||    
T  60144 cacatgcatgattaagaagttgaagttgcattgtcgagtagaagttgttgatgtcgcattgtcgttgtctttaagtggtcatttctcaatgagttattaa 60045  T
Q  101 tgaa 104  Q
    ||||    
T  60044 tgaa 60041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25946 - 26081
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||||| | || ||||||||||||||    
T  25946 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgttaattgtcaatgagttgtta 26045  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  26046 ataaagaactaagtgaagtattaatatttattaatc 26081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7811 - 7685
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| | |||| || ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7811 cacatgcatgtttaagttgttgttgttgcattgttgagttgatgtcgtttttgtcgcattgtcgttgttgttaagttgtcatttatcaatgagttgttaa 7712  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||||| | ||||||||||||||||||    
T  7711 tgaagagctatgtgaagtattaatatt 7685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1287 - 1158
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||| |||||||||||||||| ||||||||| | |||||||||||| || |||||||||||||||     |||||||||||||||||||||||||||||    
T  1287 cacatacatgattaagaagttgtagttgcattgttgagtcgaagtcgctgatgtcgcattgtcgtt-----taagttgtcatttatcaatgagttgttaa 1193  T
Q  101 tgaagaaccatgtgaagtattaatatttattaatc 135  Q
     | | ||| ||||||| ||||||||||||||||||    
T  1192 cgtataactatgtgaaatattaatatttattaatc 1158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 7921 - 7800
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||||| ||||||||| |||||| || || |||| |||||||||||||||||||||||||||| |||| |||||||||| ||||    
T  7921 cacatgcatgattaagaagttgtagttgcattgtcgagttgaggttgttgatgtcgcattgtcgttgtcgttaagttgttatttttcaatgagttattaa 7822  T
Q  101 tgaagaaccatgtgaagtatta 122  Q
    ||||| || || ||||| ||||    
T  7821 tgaagtactatatgaagaatta 7800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11836 - 11962
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||| |||||||||||||| ||||||||| |||||| || || |||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  11836 cacatgcgtgattaagaagttgtagttgcattgtcgagttgaggttgttgatgtcgcattttcgttgtcgttaagttgtcatttttcaatgagttattaa 11935  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    ||||| || || ||||| |||| ||||    
T  11936 tgaagtactatatgaagaattattatt 11962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 113763 - 113887
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||| |||| |||||| |  |||||| ||||| ||||  |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  113763 cacatgcatgattaagatgttgtagttgcctcgtcgagttgaagttgttgtcgtcgcattgtcgttgttgttaagttgtcaattatcaatgagttgttaa 113862  T
Q  101 tgaagaaccatgtgaagtattaata 125  Q
    |||||||| || ||||| |||||||    
T  113863 tgaagaactatatgaagaattaata 113887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3088 - 3223
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||||||||||||||||| | || ||||||||||||||    
T  3088 cacatgcatgattaagaagttgaagttgcatatgttgagttcaagttgtagaagtcgcattgtcgttgtcgttaagttgtaaattgtcaatgagttgtta 3187  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | |||||||||||| |||||||||||    
T  3188 ataaagaactaagtgaagtattaacatttattaatc 3223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 2450 - 2315
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||| ||||||||||||||| | | ||||  |||| || |  || ||||||||||||||||||||||||||||| |||| |||||||||    
T  2450 cacatgcatgattaaaaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttgtcatttgtcaaagagttgtta 2351  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  2350 ataaagaactaagtgaagtattaatatttattaatc 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10348 - 10483
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  || |||||||||||||||||||||| |||||| ||||||||||||||    
T  10348 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagttgcattgtcgttgtcgttaagttatcatttgtcaatgagttgtta 10447  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||| ||||||||||||||||||    
T  10448 ataaagaactaagtgaaatattaatatttattaatc 10483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 142400 - 142265
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||  |||||| ||||| ||||||||||||||| |||||||||| |||    
T  142400 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtttcattgttgttgttgttaagttgtcatttgtcaatgagttatta 142301  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||| ||||||||||||||||||||||||||    
T  142300 atgaagaactatgtgaagtattaatatttattaatc 142265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 325 - 423
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaa 123  Q
    |||||||| |||||| || ||||||| ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  325 gttgcattgtcgagtggatgtcgttgttgtcgcattgtcgttgtggttaagttgtcatttttcaatgagtggttaatgaagaactatgtgaagtattaa 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3229 - 3129
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| |||| ||| || |||||| ||||||||||||||||||| |||||||||| ||||    
T  3229 cacatgcatgattaagaagttgaagttacattgtcgagtcgaagttgttgatgttgctttgtcgctgtcgttaagttgtcatttttcaatgagttattaa 3130  T
Q  101 t 101  Q
    |    
T  3129 t 3129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 34055 - 33953
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || ||||||  ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  34055 gttgcattgtcgagtggatgtcgtttttgtcgcattgttgttgttgttaagttgccatttatcaatgagttgttaatgaagaactatgtgaactattaat 33956  T
Q  125 att 127  Q
    |||    
T  33955 att 33953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 397419 - 397314
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcatta-tcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||||  | ||||  |||| ||||  |||||||||||||||||||||||||||||||| |||||||||| |||    
T  397419 cacatgcatgattaagaagttgaagttgcatttgttgagtttaagttgttgaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttatta 397320  T
Q  100 atgaag 105  Q
    ||||||    
T  397319 atgaag 397314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 127777 - 127860
Alignment:
Q  44 gtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||| |||||| |||||||||| | |||||||||| ||| |||||||||||||||||||||| || |||||  ||||||||    
T  127777 gtcgttgttgtcgctttgtcgttgttgctaagttgtcaattagcaatgagttgttaatgaagaactatatgaagagttaatatt 127860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 948 - 819
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| ||| ||||  |||| || |  |||||      ||||||||||||||||||||| ||||||||||||||    
T  948 cacatgcatgattaagaagttgaagttgcatatattgagtttaagttgtagaagtcgc------gttgtcgttaagttgtcatttgtcaatgagttgtta 855  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  854 ataaagaactaagtgaagtattaatatttattaatc 819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8021 - 7886
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||||| |||||||||||||||||||||||||||||  ||    
T  8021 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgtcgtcgttaagttgtcatttatcaatgagtt-ata 7923  T
Q  100 atgaagaacca-tgtgaagtattaatatttattaatc 135  Q
    |  |||||| | |||||||||||||||||||||||||    
T  7922 aaaaagaactattgtgaagtattaatatttattaatc 7886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 44309 - 44385
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  44309 ttgtcgttgtcgttaagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 44385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 44279 - 44307
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgc 29  Q
    |||||||||||||||||||||||||||||    
T  44279 cacatgcatgattaagaagttgaagttgc 44307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9207 - 9342
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  || | || |   | ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  9207 cacatgcatgattaagaagttgaagttgcatatgttgagtttaatttgtagaatttgcattgtcgttttcgttaagttgtcatttgtcactgagttgtta 9306  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  9307 ataaagaactaagtgaagtattaatatttattaatc 9342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 72987 - 72885
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||  |||||| || ||||||| ||||||||||||| ||| |||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||    
T  72987 gttgcatagtcgagttgatgtcgttgttgtcgcattgtcgatgttgttaagttgtcaattatcaaggagttgttaatgaagaactatgtgaagaattaat 72888  T
Q  125 att 127  Q
    |||    
T  72887 att 72885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 65896 - 65794
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||||| |||| || ||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||| |||| || ||||| ||||||    
T  65896 gttgcattattgagttgacgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattatcaatgagtttttaatgaggaactatatgaagaattaat 65797  T
Q  125 att 127  Q
    |||    
T  65796 att 65794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 21118 - 21198
Alignment:
Q  28 gcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaac 108  Q
    ||||| |||||| || ||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  21118 gcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattatcaatgagttgttaatgaagaac 21198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 116127 - 116051
Alignment:
Q  59 ttgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  116127 ttgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 116051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 5299 - 5164
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| ||    || |||||||| |||||||||||||||| ||| ||||||||||||||    
T  5299 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtaaaagttgcattgtcattgtcgttaagttgtcctttgtcaatgagttgtta 5200  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || || ||| |  |||||||||||||||||||||||    
T  5199 ataaataactaactgaagtattaatatttattaatc 5164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 8100 - 8202
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| | |||| || ||||||| ||||||||||||||||| |||||||||||| |||  ||||||||||||||||  ||| ||||||| ||| |||    
T  8100 gttgcattgtagagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattactaatgagttgttaatgagaaactatgtgaaatatcaat 8199  T
Q  125 att 127  Q
    |||    
T  8200 att 8202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14001 - 13866
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||| || |||||||||||||| ||| | | ||||  |||| || |  ||||||||||||||||||| ||||||||| || |||||||||| |||    
T  14001 cacatgcattataaagaagttgaagttacatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgtgaagttgtcaattgtcaatgagttatta 13902  T
Q  100 atgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||| | ||||||||||||||||||||||||    
T  13901 ataaagaactaagtgaagtattaatatttattaatc 13866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 11052 - 11131
Alignment:
Q  56 gcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||| |||||| | ||||||||||||||||||||||||    
T  11052 gcattgttgttgtcgttaagttgtcatttgtcactgagttgttaataaagaactaagtgaagtattaatatttattaatc 11131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 282 - 384
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| || ||| || || |||| ||||||||||||||||| | |||||| |||||||| ||| ||||||||||||||||| |||||||||||||||    
T  282 gttgcattgtcaagtggatgttgttgttgtcgcattgtcgttgttgctaagttatcatttataaataagttgttaatgaagaactatgtgaagtattaat 381  T
Q  125 att 127  Q
    |||    
T  382 att 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 7601 - 7699
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaa 123  Q
    |||||||| |||||| || ||||||| ||||||||||||||||| |||||||||||| |||| ||| | ||||||||||||||| ||||||| ||||||    
T  7601 gttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattattaataaattgttaatgaagaactatgtgaattattaa 7699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10727 - 10868
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgt------cgttgtcgttaagttgtcatttatcaatgag 93  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||      ||||||||||||||||||| || ||||||||    
T  10727 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttgtcgttaagttgtcagttgtcaatgag 10826  T
Q  94 ttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||||||||| ||||||  ||||||||||||||||||    
T  10827 ttattaatgaagaactatgtgatttattaatatttattaatc 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16530 - 16671
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgt------cgttgtcgttaagttgtcatttatcaatgag 93  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  ||||||||||      ||||||||||||||||||| || ||||||||    
T  16530 cacatgcatgattaagaagttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttgtcgttaagttgtcagttgtcaatgag 16629  T
Q  94 ttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    || |||||||||||| ||||||  ||||||||||||||||||    
T  16630 ttattaatgaagaactatgtgatttattaatatttattaatc 16671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1124 - 1229
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||||||||||||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||  |||||||||| |||    
T  1124 cacatgcatgattaagaagttgaagttgcatatgttgagttaaagtagtagaagtcgcattgtcgttgtcgttaagttgtcattcgtcaatgagttatta 1223  T
Q  100 atgaag 105  Q
    ||||||    
T  1224 atgaag 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 1091 - 976
Alignment:
Q  12 ttaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccat 111  Q
    ||||||||||||| ||||||| || ||||||||| |||  |||||| ||||||| ||| ||||||||| |||| ||||||| |||||| |||||||| ||    
T  1091 ttaagaagttgaaattgcattgtcaagtcgaagttgttaatgtcgcgttgtcgtcgtcattaagttgttatttttcaatgaattgttattgaagaactat 992  T
Q  112 gtgaagtattaatatt 127  Q
    ||| ||||||| ||||    
T  991 gtggagtattagtatt 976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 8951 - 8836
Alignment:
Q  12 ttaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccat 111  Q
    ||||||||||||| ||||||| || ||||||||| |||  |||||| ||||||| ||| ||||||||| |||| ||||||| |||||| |||||||| ||    
T  8951 ttaagaagttgaaattgcattgtcaagtcgaagttgttaatgtcgcgttgtcgtcgtcattaagttgttatttttcaatgaattgttattgaagaactat 8852  T
Q  112 gtgaagtattaatatt 127  Q
    ||| ||||||| ||||    
T  8851 gtggagtattagtatt 8836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 357 - 424
Alignment:
Q  60 tgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  357 tgtcgttgttgttaagttgtcatttatcaatgagttattaatgaagaactatgtgaagtattgatatt 424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 106156 - 106086
Alignment:
Q  64 gttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaat 134  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| | |||||||||||||||||||||||    
T  106156 gttgtcgttaagttttcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaat 106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 106191 - 106163
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgc 29  Q
    |||||||||||||||||||||||||||||    
T  106191 cacatgcatgattaagaagttgaagttgc 106163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 14921 - 15025
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| |||| |||||||| | ||||||||||| |||| | |||||| |||    
T  14921 cacatgcatgattaagaagatgtagttgcattgtcgagtggaagtcgtagatgttgcatagtcgttgttgataagttgtcatatatccaagagttgctaa 15020  T
Q  101 tgaag 105  Q
    |||||    
T  15021 tgaag 15025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 4913 - 4993
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtca 81  Q
    ||||||||||||||||||| || ||||||||| |||||| |||||||| | ||| |||| |||||||| | ||||||||||    
T  4913 cacatgcatgattaagaagatgtagttgcattgtcgagtggaagtcgtagatgttgcatagtcgttgttgataagttgtca 4993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 446 - 318
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgtta 99  Q
    ||||||||||| ||||||||||||||||||| | | ||||  |||| || |  |||||||   |||||||||||||||||||||| ||||||||| ||||    
T  446 cacatgcatgactaagaagttgaagttgcatatgtagagtttaagttgtagaagtcgcatgaccgttgtcgttaagttgtcatttgtcaatgagtcgtta 347  T
Q  100 atgaagaaccatgtgaagtattaatattt 128  Q
    ||  ||||| | |||||||||||||||||    
T  346 atagagaactaggtgaagtattaatattt 318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 103
Target Start/End: Original strand, 19018 - 19096
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatga 103  Q
    |||||||| |||||| || ||||||| ||||||||||||||||| |||||||||||| |||  ||||||||||||||||    
T  19018 gttgcattgtcgagttgatgtcgttgttgtcgcattgtcgttgttgttaagttgtcaattactaatgagttgttaatga 19096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 95181 - 95066
Alignment:
Q  8 atgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaa 107  Q
    |||||||||| || ||||||||||| || ||| ||||||||    ||||||||||| |||| |||||||||| |||||||||||| || |||||||||||    
T  95181 atgattaagatgtcgaagttgcattgtcaagttgaagtcgt----gtcgcattgtcattgttgttaagttgttatttatcaatgaatttttaatgaagaa 95086  T
Q  108 ccatgtgaagtattaatatt 127  Q
      | |||||| |||||||||    
T  95085 ttacgtgaagaattaatatt 95066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 2642 - 2565
Alignment:
Q  58 attgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| |||||| | ||||| | ||| ||||||||||||    
T  2642 attgtcgttgtcgttgagttgtcatttgtcaatgagttgttaataaagaactaagtgaaatgttagtatttattaatc 2565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 53728 - 53829
Alignment:
Q  4 atgcatgattaagaagttgaagttgcat-tatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatg 102  Q
    |||||||||||||| ||||||||||||| | | ||||  |||| || |  |||||||||||||||||||||||||||||||| ||||||||||  |||||    
T  53728 atgcatgattaagaggttgaagttgcatatgttgagtttaagttgtagaagtcgcattgtcgttgtcgttaagttgtcatttgtcaatgagttaataatg 53827  T
Q  103 aa 104  Q
    ||    
T  53828 aa 53829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 71621 - 71560
Alignment:
Q  74 agttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatttattaatc 135  Q
    ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||    
T  71621 agttgtcatttgtcaatgagttgttaataaagaactaagtgaagtattaatatttattaatc 71560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 4726 - 4828
Alignment:
Q  25 gttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaat 124  Q
    |||||||| |||||| || |||| || ||||||||||||||||| || ||||||||| ||   ||||||||||||||||  ||| ||||||||||| |||    
T  4726 gttgcattgtcgagttgatgtcgatgttgtcgcattgtcgttgttgtcaagttgtcaattcctaatgagttgttaatgagaaactatgtgaagtatcaat 4825  T
Q  125 att 127  Q
    |||    
T  4826 att 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15240 - 15191
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  15240 cacatgcatgattaagaagttgaagttacattatcgagtcaaagtcgttg 15191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 56696 - 56647
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  56696 cacatgcatgattaagaagttgaagttgcattgtcgagtcaaagtcgttg 56647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3616 - 3490
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| |||||| || ||||||  ||||  ||||||||||| || ||||||||| |||  || ||||||||||    
T  3616 cacatgcatgtttaagttgttgttgttgcattgtcgagttgatgtcgttattgtcaaattgtcgttgttgtcaagttgtcaattactaaggagttgttaa 3517  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||  ||| ||| ||||||||||||||    
T  3516 tgagaaactatgagaagtattaatatt 3490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 599 - 648
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  599 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8290 - 8241
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  8290 cacatgcatgattaagaagtcgaagttgcattgtcgagtctaagtcgttg 8241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13883 - 13932
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  13883 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 13932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10790 - 10741
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  10790 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaagtcgttg 10741  T

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Target: scaffold0278 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7350 - 7301
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  7350 cacatgcatgattaagaagtcgaagttgcattctcgagtcaaagtcgttg 7301  T

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Target: scaffold0716 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 822 - 714
Alignment:
Q  1 cacatgcatgattaagaagttgaagtt----gcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttg 96  Q
    ||||||||||||||||||| || ||||    |||||  ||||| |||||||| | ||| ||||||||||||| ||||||||||  | |||| ||||| ||    
T  822 cacatgcatgattaagaagatgtagttaattgcattgccgagttgaagtcgtagatgttgcattgtcgttgttgttaagttgttgtctatccatgaggtg 723  T
Q  97 ttaatgaag 105  Q
    |||||||||    
T  722 ttaatgaag 714  T

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Target: scaffold1633 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 142 - 93
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| | |||||||    
T  142 cacatgcatgattaagaagtcgaagttgcattttcgagtcaatgtcgttg 93  T

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Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8007 - 8056
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||||| || ||||||||||| ||||||| |||||||||    
T  8007 cacatgcatgattaagaggtcgaagttgcattgtcgagtcaaagtcgttg 8056  T

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Target: scaffold0500 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7335 - 7286
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||| |||||||||||||||| |||||||| ||||||| |||||||||    
T  7335 cacatggatgattaagaagttgaggttgcattgtcgagtcaaagtcgttg 7286  T

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Target: scaffold0203 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19240 - 19289
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| ||||||||||| ||||||| || ||||||    
T  19240 cacatgcatgattaagaagtcgaagttgcattgtcgagtcaaaatcgttg 19289  T

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Target: scaffold0331 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13242 - 13346
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||||||||||||  |  |||||| | |||||| |||||||| | ||| |||| | |||||| | ||||||||||| || | || |||||||||    
T  13242 cacatgcatgattaagaagaagtggttgcactgtcgagttgaagtcgtagatgttgcatagccgttgttgataagttgtcatatacccataagttgttaa 13341  T
Q  101 tgaag 105  Q
    |||||    
T  13342 tgaag 13346  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 27649 - 27605
Alignment:
Q  83 ttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    |||||||||||||||||||||||||| || ||||| |||||||||    
T  27649 ttatcaatgagttgttaatgaagaactatatgaagaattaatatt 27605  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7778 - 7882
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    ||||||||||||||||||| || || | |||  |||||| |||||| | | ||| ||||||||||||| | ||||||||||| |||| ||  | ||||||    
T  7778 cacatgcatgattaagaagatgtagctccatagtcgagttgaagtcttagatgttgcattgtcgttgttgataagttgtcatctatctataggctgttaa 7877  T
Q  101 tgaag 105  Q
    |||||    
T  7878 tgaag 7882  T

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Target: scaffold1256 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 496 - 571
Alignment:
Q  52 tgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaatgaagaaccatgtgaagtattaatatt 127  Q
    |||||||||||||||||  | ||||||||| |||  ||||||||||||||||  ||  ||||||||||| ||||||    
T  496 tgtcgcattgtcgttgttatcaagttgtcaattactaatgagttgttaatgagaaattatgtgaagtatcaatatt 571  T

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Target: scaffold0338 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 15258 - 15366
Alignment:
Q  1 cacatgcatgattaagaagttgaagtt----gcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttg 96  Q
    ||||||||||||||||||| || ||||    |||||  ||||| |||||||| | ||| ||||||||||||| ||||||| ||| | ||||  |||||||    
T  15258 cacatgcatgattaagaagatgtagttaattgcattgccgagttgaagtcgtagatgttgcattgtcgttgttgttaagtcgtcgtctatccgtgagttg 15357  T
Q  97 ttaatgaag 105  Q
    || ||||||    
T  15358 ttgatgaag 15366  T

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Target: scaffold0292 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4528 - 4489
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtc 40  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  4528 cacatgcatgattaagaagtcgaagttgcattgtcgagtc 4489  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 22018 - 21975
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcattatcgagtcgaagt 45  Q
    |||||||||||||||||| |||||||||||  ||||||||||||    
T  22018 acatgcatgattaagaagatgaagttgcatagtcgagtcgaagt 21975  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 39814 - 39688
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttggtgtcgcattgtcgttgtcgttaagttgtcatttatcaatgagttgttaa 100  Q
    |||||||||| |||||  ||||  |||||||| || | | || |||| || | |||| |||||||||| || ||||||||| |||  ||||| |||||||    
T  39814 cacatgcatgtttaagtcgttgtcgttgcattgtcaaattgatgtcgatgttatcgcgttgtcgttgttgtcaagttgtcaattactaatgaattgttaa 39715  T
Q  101 tgaagaaccatgtgaagtattaatatt 127  Q
    |||  ||| ||||||||||| ||||||    
T  39714 tgagaaactatgtgaagtatcaatatt 39688  T

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Target: scaffold0546 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10772 - 10723
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| |||||||||||  |||||| | |||||||    
T  10772 cacatgcatgattaagaagtcgaagttgcattgccgagtcaatgtcgttg 10723  T

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Target: scaffold0109 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1029 - 1078
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    |||||||||||||||||||| |||||||||||  |||||| | |||||||    
T  1029 cacatgcatgattaagaagtcgaagttgcattgccgagtcaatgtcgttg 1078  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19583 - 19632
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||||||||||||||||||  |||||||||| ||||||  |||||||||    
T  19583 cacatgcatgattaagaagtcaaagttgcattgtcgagttaaagtcgttg 19632  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 145698 - 145649
Alignment:
Q  1 cacatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||| |||||||||||||| ||||| ||||| ||||||| |||||||||    
T  145698 cacatacatgattaagaagtcgaagtcgcattgtcgagtcaaagtcgttg 145649  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 63421 - 63469
Alignment:
Q  2 acatgcatgattaagaagttgaagttgcattatcgagtcgaagtcgttg 50  Q
    ||||| ||||||||||||| ||||||||||| ||||||| || ||||||    
T  63421 acatgtatgattaagaagtcgaagttgcattgtcgagtcaaattcgttg 63469  T

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