View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18793_low_34 (Length: 207)
Name: NF18793_low_34
Description: NF18793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18793_low_34 |
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Alignment Details
Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 30906479 - 30906587
Alignment:
| Q |
18 |
aaaggtactttctgtcaagtgtcaactgtnnnnnnngcaagaaccattcaacatttttgatccacagattctgttcttgtcaaacaaaacatgattttgt |
117 |
Q |
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| T |
30906479 |
aaaggtactttctgtcaagtgtcaactgttaaaaaagcaagaaccattcaacatttttgatccacagattctgttcttgtcaaacaaaacatgattttgt |
30906578 |
T |
|
| Q |
118 |
actataaag |
126 |
Q |
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||||||||| |
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| T |
30906579 |
actataaag |
30906587 |
T |
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