View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18794_low_9 (Length: 237)

Name: NF18794_low_9
Description: NF18794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18794_low_9
NF18794_low_9
[»] chr8 (20 HSPs)
chr8 (1-221)||(42712395-42712615)
chr8 (1-221)||(20029929-20030149)
chr8 (1-212)||(12925118-12925324)
chr8 (1-158)||(20044631-20044788)
chr8 (1-120)||(12767482-12767601)
chr8 (153-221)||(20037690-20037758)
chr8 (1-40)||(31575624-31575663)
chr8 (158-211)||(12767433-12767486)
chr8 (1-33)||(18143645-18143677)
chr8 (1-40)||(24633966-24634005)
chr8 (3-38)||(33592287-33592322)
chr8 (3-38)||(33601926-33601961)
chr8 (3-38)||(42896302-42896337)
chr8 (1-33)||(4843940-4843972)
chr8 (1-33)||(18232866-18232898)
chr8 (1-33)||(18242317-18242349)
chr8 (1-33)||(18251768-18251800)
chr8 (1-33)||(18883376-18883408)
chr8 (1-33)||(25037242-25037274)
chr8 (1-33)||(25051279-25051311)
[»] chr2 (8 HSPs)
chr2 (1-221)||(35877266-35877486)
chr2 (1-221)||(35884755-35884975)
chr2 (1-221)||(36724468-36724688)
chr2 (1-221)||(3396673-3396893)
chr2 (1-37)||(1790943-1790979)
chr2 (1-37)||(1800437-1800473)
chr2 (1-37)||(22632346-22632382)
chr2 (1-33)||(14273142-14273174)
[»] scaffold0206 (1 HSPs)
scaffold0206 (1-221)||(1859-2079)
[»] scaffold0021 (3 HSPs)
scaffold0021 (1-221)||(142919-143139)
scaffold0021 (1-41)||(99923-99963)
scaffold0021 (1-41)||(180846-180886)
[»] chr1 (5 HSPs)
chr1 (1-221)||(3471154-3471374)
chr1 (1-212)||(14272235-14272438)
chr1 (1-212)||(14282101-14282304)
chr1 (1-40)||(21919581-21919620)
chr1 (1-38)||(21633515-21633552)
[»] chr5 (15 HSPs)
chr5 (1-221)||(20035749-20035969)
chr5 (1-212)||(33955717-33955922)
chr5 (5-212)||(20834195-20834397)
chr5 (1-211)||(11223137-11223346)
chr5 (1-40)||(42732790-42732829)
chr5 (1-37)||(5600524-5600560)
chr5 (1-37)||(5610170-5610206)
chr5 (1-37)||(17553997-17554033)
chr5 (1-37)||(31150840-31150876)
chr5 (1-40)||(22448480-22448519)
chr5 (1-40)||(22457798-22457837)
chr5 (1-40)||(26652554-26652593)
chr5 (1-40)||(26924139-26924178)
chr5 (1-33)||(24244259-24244291)
chr5 (1-33)||(24290883-24290915)
[»] chr3 (11 HSPs)
chr3 (1-221)||(46305790-46306010)
chr3 (1-215)||(5385446-5385660)
chr3 (1-211)||(13328495-13328704)
chr3 (1-124)||(23486888-23487011)
chr3 (1-41)||(54624595-54624635)
chr3 (1-37)||(17530066-17530102)
chr3 (1-37)||(17535005-17535041)
chr3 (1-37)||(48978614-48978650)
chr3 (1-37)||(48988154-48988190)
chr3 (158-211)||(23486843-23486896)
chr3 (3-41)||(32877810-32877848)
[»] chr4 (6 HSPs)
chr4 (1-212)||(20884666-20884872)
chr4 (1-211)||(11482075-11482285)
chr4 (1-124)||(50516714-50516839)
chr4 (1-41)||(23622859-23622899)
chr4 (1-41)||(16490048-16490088)
chr4 (98-147)||(50516771-50516820)
[»] chr6 (4 HSPs)
chr6 (1-212)||(22066057-22066263)
chr6 (1-212)||(23884256-23884462)
chr6 (1-209)||(17512439-17512649)
chr6 (1-41)||(12415004-12415044)
[»] chr7 (14 HSPs)
chr7 (1-177)||(15947590-15947767)
chr7 (1-177)||(33292394-33292571)
chr7 (1-211)||(28343967-28344176)
chr7 (1-211)||(9736705-9736916)
chr7 (1-85)||(14634995-14635080)
chr7 (1-85)||(14644695-14644780)
chr7 (98-212)||(14635053-14635161)
chr7 (98-212)||(14644753-14644861)
chr7 (1-88)||(32817880-32817967)
chr7 (98-206)||(32817802-32817910)
chr7 (1-37)||(14777359-14777395)
chr7 (1-37)||(15229497-15229533)
chr7 (1-38)||(48711498-48711535)
chr7 (1-33)||(11634546-11634578)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-40)||(2411-2450)
[»] scaffold0247 (1 HSPs)
scaffold0247 (5-41)||(24533-24569)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-40)||(12698-12737)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-33)||(256897-256929)


Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42712395 - 42712615
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42712395 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 42712494  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42712495 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 42712594  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  42712595 tctcaatgagaattaaagatg 42712615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 20030149 - 20029929
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20030149 tatctcaaactattaagccaaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 20030050  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  20030049 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgaatacaaactcagaaatatgt 20029950  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  20029949 tctcaatgagaattaaagatg 20029929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 12925324 - 12925118
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  12925324 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaagtaagaaagatgtt 12925225  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| | |||||||    
T  12925224 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaatatg 12925131  T
Q  200 ttctcaatgagaa 212  Q
    |||||||||||||    
T  12925130 ttctcaatgagaa 12925118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 20044788 - 20044631
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  20044788 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgaatgtttggatcgaatgtctcaaacaaaaataagaaatatgttg 20044689  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgt 158  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20044688 tttagatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgt 20044631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12767601 - 12767482
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  12767601 tatctcaaactattaagctcaatagacttgagatctagttatctttttgtaagatgattgtttggatctaatgtctcaaacgaaaatgagaaagatgttg 12767502  T
Q  101 tttggatctagcgtctcaaa 120  Q
    ||||||||||||||||||||    
T  12767501 tttggatctagcgtctcaaa 12767482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 20037758 - 20037690
Alignment:
Q  153 atatgtcaaacaaactatccttgtatgagtacaaactcataaatatgttctcaatgagaattagagatg 221  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| |||||    
T  20037758 atatgtcaaacaaactatccttgtatgaatacaaactcagaaatatgttctcaataagaattaaagatg 20037690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 31575624 - 31575663
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31575624 tatctcaaactattaagcccaatagacttgagatctagtt 31575663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 12767486 - 12767433
Alignment:
Q  158 tcaaacaaactatccttgtatgagtacaaactcataaatatgttctcaatgaga 211  Q
    ||||| ||||||||||||||  | |||||||||||||| |||||||||||||||    
T  12767486 tcaaaaaaactatccttgtacaaatacaaactcataaagatgttctcaatgaga 12767433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18143645 - 18143677
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||||||||||||||||||||||    
T  18143645 tatctcaaactattaagcccaatagacttgaga 18143677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24634005 - 24633966
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    |||| ||||||||||| |||||||||||||||||||||||    
T  24634005 tatcccaaactattaaacccaatagacttgagatctagtt 24633966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 33592287 - 33592322
Alignment:
Q  3 tctcaaactattaagcccaatagacttgagatctag 38  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33592287 tctcaaactattaagcccaatagacttgagaactag 33592322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 33601926 - 33601961
Alignment:
Q  3 tctcaaactattaagcccaatagacttgagatctag 38  Q
    ||||||||||||||||||||||||||||||| ||||    
T  33601926 tctcaaactattaagcccaatagacttgagaactag 33601961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 42896302 - 42896337
Alignment:
Q  3 tctcaaactattaagcccaatagacttgagatctag 38  Q
    ||||||||||||||||||||||||||||||| ||||    
T  42896302 tctcaaactattaagcccaatagacttgagaactag 42896337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 4843940 - 4843972
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    ||||||||||||||||| |||||||||||||||    
T  4843940 tatctcaaactattaaggccaatagacttgaga 4843972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18232898 - 18232866
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  18232898 tatctcaaactattcagcccaatagacttgaga 18232866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18242349 - 18242317
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  18242349 tatctcaaactattcagcccaatagacttgaga 18242317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18251800 - 18251768
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  18251800 tatctcaaactattcagcccaatagacttgaga 18251768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 18883376 - 18883408
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  18883376 tatctcaaactattcagcccaatagacttgaga 18883408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25037242 - 25037274
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  25037242 tatctcaaactattaagcccaatatacttgaga 25037274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 25051279 - 25051311
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  25051279 tatctcaaactattaagcccaatatacttgaga 25051311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 35877486 - 35877266
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35877486 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 35877387  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35877386 tttggatctagtgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 35877287  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  35877286 tctcaatgagaattaaagatg 35877266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 35884975 - 35884755
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35884975 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 35884876  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35884875 tttggatctagtgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 35884776  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  35884775 tctcaatgagaattaaagatg 35884755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 36724688 - 36724468
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36724688 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 36724589  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36724588 tttggatctagtgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 36724489  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  36724488 tctcaatgagaattaaagatg 36724468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3396893 - 3396673
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  3396893 tatctcaaactattaagcccaatagacttgagatctagttgtctctttgtaaggtgattgtttggatctaatgtctcaaacaaaaataagaaagatggtg 3396794  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| | |||||||||| ||||||||    
T  3396793 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggatctttatgtgtcaaacaaactatccttatataaatacaaactcagaaatatgt 3396694  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  3396693 tctcaatgagaattaaagatg 3396673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1790979 - 1790943
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  1790979 tatctcaaactattaagcccaatagacttgagatcta 1790943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1800473 - 1800437
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  1800473 tatctcaaactattaagcccaatagacttgagatcta 1800437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22632382 - 22632346
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  22632382 tatctcaaactattaagcccaatagacttgagatcta 22632346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14273174 - 14273142
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    ||||| |||||||||||||||||||||||||||    
T  14273174 tatcttaaactattaagcccaatagacttgaga 14273142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 2079 - 1859
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2079 tatctcaaactattaagccaaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 1980  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  1979 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgaatacaaactcagaaatatgt 1880  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  1879 tctcaatgagaattaaagatg 1859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 193; Significance: 1e-105; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 143139 - 142919
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  143139 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaattaagaaagatgttg 143040  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  143039 tttggatctagcgtctcaaacaaaatatgtgtaggatgttgtttggaactttatatgttaaacaaactatccttgtatgaatacaaactcagaaatatgt 142940  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  142939 tctcaatgagaattaaagatg 142919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 99963 - 99923
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtta 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  99963 tatctcaaactattaagcccaatagacttgagatctagtta 99923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 180886 - 180846
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtta 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  180886 tatctcaaactattaagcccaatagacttgagatctagtta 180846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 3471154 - 3471374
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3471154 tatctcaaactattaaacccaatagacttgagatctagttatctctttgtaaggtgattgtttggatctaatgtctcaaacaaaaataagaaagatgttg 3471253  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3471254 tttggatctagcgtctcaaacaaaagatgtgtgggatgttgtttggatctttatgtgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 3471353  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  3471354 tctcaatgagaattaaagatg 3471374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14272235 - 14272438
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  14272235 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaaaaaaagtaagaaagatgtt 14272334  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatg 199  Q
       ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| | |||||||    
T  14272335 ---tggatctggcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaatatg 14272425  T
Q  200 ttctcaatgagaa 212  Q
    |||||||||||||    
T  14272426 ttctcaatgagaa 14272438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 14282101 - 14282304
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  14282101 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaaaaaaagtaagaaagatgtt 14282200  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatg 199  Q
       ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| | |||||||    
T  14282201 ---tggatctggcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaatatg 14282291  T
Q  200 ttctcaatgagaa 212  Q
    |||||||||||||    
T  14282292 ttctcaatgagaa 14282304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21919581 - 21919620
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  21919581 tatctcaaactattaagcccaatagacttgagaactagtt 21919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21633552 - 21633515
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctag 38  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  21633552 tatctcaaactattatgcccaatagacttgagacctag 21633515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 20035969 - 20035749
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20035969 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatctaatgtctcaaacaaaaataagaaagatgttg 20035870  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||| | |||||||||| ||||||||    
T  20035869 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggatatttatgtgtcaaacaaactatccttgtataaatacaaactcagaaatatgt 20035770  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  20035769 tctcaatgagaattaaagatg 20035749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 33955717 - 33955922
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33955717 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatcgaatgtctcaaacaaaagtaagaaagatgttg 33955816  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||      ||||||||| | ||||||||    
T  33955817 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttgaaactttatatgtcaaacaaactatcctt------gtacaaacttagaaatatgt 33955910  T
Q  201 tctcaatgagaa 212  Q
    ||||||||||||    
T  33955911 tctcaatgagaa 33955922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 212
Target Start/End: Complemental strand, 20834397 - 20834195
Alignment:
Q  5 tcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgttgttt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  20834397 tcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaagtaataaagatgttgttt 20834298  T
Q  104 ggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgttct 203  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||      ||||||||| | |||||||||||    
T  20834297 ggatctggcgtctcaaacaaaagatgtgtaggatgctgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaatatgttct 20834204  T
Q  204 caatgagaa 212  Q
    |||||||||    
T  20834203 caatgagaa 20834195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 11223346 - 11223137
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||| |||||||||||||||||||||||||||||||    
T  11223346 tatctcaaactattaagcccaatagacttgagatctagttatcactttgtaggatgattgtttggatctaatgtctcaaacaaaaataagaaagatgttg 11223247  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||| | | ||||||||||||||||| ||  | |||||||||| ||| ||||    
T  11223246 tttggatctagcgtctcaaacaaaa-atatgtaggatgttgtttggatctttgtgtctcaaacaaactatccttttacaaatacaaactcaaaaagatgt 11223148  T
Q  201 tctcaatgaga 211  Q
    |||||||||||    
T  11223147 tctcaatgaga 11223137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 42732790 - 42732829
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42732790 tatctcaaactattaagcccaatagacttgagatctagtt 42732829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5600560 - 5600524
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  5600560 tatctcaaactattaagcccaatagacttgagatcta 5600524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5610206 - 5610170
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  5610206 tatctcaaactattaagcccaatagacttgagatcta 5610170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17553997 - 17554033
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  17553997 tatctcaaactattaagcccaatagacttgagatcta 17554033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31150840 - 31150876
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  31150840 tatctcaaactattaagcccaatagacttgagatcta 31150876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22448480 - 22448519
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  22448480 tatctcaaactattaagcccaatagactttagatctagtt 22448519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22457798 - 22457837
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  22457798 tatctcaaactattaagcccaatagacttaagatctagtt 22457837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26652593 - 26652554
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  26652593 tatctcaaactattaagcccagtagacttgagatctagtt 26652554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26924178 - 26924139
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  26924178 tatctcaaactattaagcccagtagacttgagatctagtt 26924139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24244259 - 24244291
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  24244259 tatctcaaactattcagcccaatagacttgaga 24244291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24290883 - 24290915
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  24290883 tatctcaaactattcagcccaatagacttgaga 24290915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 46305790 - 46306010
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  46305790 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgattgtttggatagaatgtctcaaacaaaaataagaaggatgttg 46305889  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| |||    
T  46305890 tttggatctagcgtctcaaacaaaagatttgtaggatgttgtttggatctttatatgtcaaacaaactatcattgtatgaatacaaactcataaatgtgt 46305989  T
Q  201 tctcaatgagaattagagatg 221  Q
    ||||||||||||||| |||||    
T  46305990 tctcaatgagaattaaagatg 46306010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5385660 - 5385446
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5385660 tatctcaaactattaagcccaatagacttgagatctagttacctctttggaaggtgattgtttggatctaatgtctcaaacaaaaataagaaagatgttg 5385561  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  5385560 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggatctttatgtgtcaaacaaactatccttgtatgaatacaaactcagaaatatgt 5385461  T
Q  201 tctcaatgagaatta 215  Q
    |||||||||||||||    
T  5385460 tctcaatgagaatta 5385446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 13328495 - 13328704
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||| || |||||||||||||| || ||||||||| ||||||||||||||||||    
T  13328495 tatctcaaactattaatcccagtagacttgagatctagttatctctttgtaagatgattgtttggatctaa-gtctcaaacgaaaataagaaagatgttg 13328593  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||| ||| ||||    
T  13328594 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggatctttatatgtcaaacaaactatccttgtacaaatacaaactcagaaagatgt 13328693  T
Q  201 tctcaatgaga 211  Q
    |||||||||||    
T  13328694 tctcaatgaga 13328704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23487011 - 23486888
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  23487011 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaagatgattgtttggatctaatgtctcaaacgaaaatgagaaagatgttg 23486912  T
Q  101 tttggatctagcgtctcaaacaaa 124  Q
    ||||||||||||||||||||||||    
T  23486911 tttggatctagcgtctcaaacaaa 23486888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 54624635 - 54624595
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtta 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  54624635 tatctcaaactattaagcccaatagacttgagatctagtta 54624595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17530066 - 17530102
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  17530066 tatctcaaactattaagcccaatagacttgagatcta 17530102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17535005 - 17535041
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  17535005 tatctcaaactattaagcccaatagacttgagatcta 17535041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48978650 - 48978614
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  48978650 tatctcaaactattaagcccaatagacttgagatcta 48978614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48988190 - 48988154
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  48988190 tatctcaaactattaagcccaatagacttgagatcta 48988154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 23486896 - 23486843
Alignment:
Q  158 tcaaacaaactatccttgtatgagtacaaactcataaatatgttctcaatgaga 211  Q
    ||||||||||||||||||||  | |||||||||| ||| |||||||||||||||    
T  23486896 tcaaacaaactatccttgtacaaatacaaactcagaaagatgttctcaatgaga 23486843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 32877848 - 32877810
Alignment:
Q  3 tctcaaactattaagcccaatagacttgagatctagtta 41  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  32877848 tctcaaactattatgctcaatagacttgagatctagtta 32877810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 20884666 - 20884872
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  20884666 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaagtaagaaagatgtt 20884765  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatg 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      ||||||||| | |||||||    
T  20884766 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcatt------gtacaaacttagaaatatg 20884859  T
Q  200 ttctcaatgagaa 212  Q
    |||||||||||||    
T  20884860 ttctcaatgagaa 20884872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 11482285 - 11482075
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  11482285 tatctcaaactattaagccgaatagacttgagatctagttttctctttgtaagatgattgtttggatctaatgtctcaaacaaaaataagaaagatgttg 11482186  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| | | ||||||||||||||||||||| | |||||||||||||| ||||    
T  11482185 tttggatctagcgtctcaaacaaaagatatgtaggatgttgtttggatctttgtgtctcaaacaaactatccttgtataaatacaaactcataaagatgt 11482086  T
Q  201 tctcaatgaga 211  Q
    |||||||||||    
T  11482085 tctcaatgaga 11482075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 50516714 - 50516839
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaata-agaaagatgtt 99  Q
    ||||||||||||||||||||||||||||||||||||| ||  | ||||||  | |||||||||||||| |  ||||||||||||||||  | | ||||||    
T  50516714 tatctcaaactattaagcccaatagacttgagatctattttacactttgtaggatgattgtttggatctagcgtctcaaacaaaaatattgtaggatgtt 50516813  T
Q  100 gtttggatct-agcgtctcaaacaaa 124  Q
    ||||||||||  ||||||||||||||    
T  50516814 gtttggatctccgcgtctcaaacaaa 50516839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23622899 - 23622859
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtta 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23622899 tatctcaaactattaagcccaatagacttgagatctagtta 23622859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16490048 - 16490088
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtta 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  16490048 tatctcaaactattaagcccaataaacttgagatctagtta 16490088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 50516771 - 50516820
Alignment:
Q  98 ttgtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttgga 147  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||    
T  50516771 ttgtttggatctagcgtctcaaacaaaaatattgtaggatgttgtttgga 50516820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 8e-82; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 22066263 - 22066057
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||| |    
T  22066263 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaagtaataaagatgct 22066164  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatg 199  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| | |||||||    
T  22066163 gtttggatctggcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaatatg 22066070  T
Q  200 ttctcaatgagaa 212  Q
    |||||||||||||    
T  22066069 ttctcaatgagaa 22066057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 23884462 - 23884256
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||| |||||    
T  23884462 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaagtaataaaaatgtt 23884363  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatg 199  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| | |||||||    
T  23884362 gtttggatctggcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaatatg 23884269  T
Q  200 ttctcaatgagaa 212  Q
    |||||||||||||    
T  23884268 ttctcaatgagaa 23884256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 17512439 - 17512649
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaac-aaaaataagaaagatgtt 99  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||| |  ||||||||| ||||||| | | ||||||    
T  17512439 tatctaaaactattaagcccaatagacttgagatctagttatcactttgtaggatgattgtttggatctagcgtctcaaacaaaaaatatgtaggatgtt 17512538  T
Q  100 gtttggatc-tagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatat 198  Q
    ||||||||| | | |||||||| |||| || |||||||||||||||||| ||||   | ||||||||||||||||| ||  | |||||||||| ||| ||    
T  17512539 gtttggatctttgtgtctcaaagaaaaaatatgtaggatgttgtttggatctttgcgtctcaaacaaactatccttttacaaatacaaactcagaaagat 17512638  T
Q  199 gttctcaatga 209  Q
    |||||||||||    
T  17512639 gttctcaatga 17512649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12415044 - 12415004
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtta 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12415044 tatctcaaactattaagcccaatagacttgagatctagtta 12415004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 15947590 - 15947767
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||    
T  15947590 tatctcaaactattaagcccaatagccttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaagtaagaaagatgtt 15947689  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgta 177  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15947690 gtttggatctggcgtctcaaacaaaagatgagtaggatgttgtttggaactttatatgtcaaacaaactatccttgta 15947767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 33292394 - 33292571
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgatt-gtttggatcgaatgtctcaaacaaaaataagaaagatgtt 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||  ||| |||||||||    
T  33292394 tatctcaaactattgagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaggtaataaagatgtt 33292493  T
Q  100 gtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgta 177  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33292494 gtttggatctggcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgta 33292571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 28344176 - 28343967
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||| |||||||||||||||||||||||||||||||    
T  28344176 tatctcaaactattaagcccaatagacttgagatctagttatcactttgtaggatgattgtttggatctaatgtctcaaacaaaaataagaaagatgttg 28344077  T
Q  101 tttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatgt 200  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||| |||| | | || ||||||||||| || ||  | |||||||||| ||| ||||    
T  28344076 tttggatctagcgtctcaaacaaaa-aaatgtaggatgttgtttggatctttgtgtctccaacaaactatcattttacaaatacaaactcagaaagatgt 28343978  T
Q  201 tctcaatgaga 211  Q
    |||||||||||    
T  28343977 tctcaatgaga 28343967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 9736916 - 9736705
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaataagaaagatgttg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||| |   |||||||| |||||| | |||||||||    
T  9736916 tatctcaaactattaagcccaatagacttgagatctagttatcactttgtaggatgattgtttggatctagcttctcaaaccaaaatatgtaagatgttg 9736817  T
Q  101 tttggatc-tagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaatatg 199  Q
    |||||||| | | ||||||||||||| || |||||||||||||||||| |||| | | ||| ||| ||||||||| ||  | |||||||||| ||| |||    
T  9736816 tttggatctttgtgtctcaaacaaaaaatatgtaggatgttgtttggatctttgtgtctcagacagactatccttttacaaatacaaactcagaaagatg 9736717  T
Q  200 ttctcaatgaga 211  Q
    ||||||||||||    
T  9736716 ttctcaatgaga 9736705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14634995 - 14635080
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtga-ttgtttggatcgaatgtctcaaacaaaa 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  14634995 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaa 14635080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14644695 - 14644780
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtga-ttgtttggatcgaatgtctcaaacaaaa 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  14644695 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtaaggtgatttgtttggatcgaatgtctcaaacaaaa 14644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 14635053 - 14635161
Alignment:
Q  98 ttgtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaata 197  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| | |||||    
T  14635053 ttgtttggatcgaatgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaata 14635146  T
Q  198 tgttctcaatgagaa 212  Q
    |||||||||||||||    
T  14635147 tgttctcaatgagaa 14635161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 98 - 212
Target Start/End: Original strand, 14644753 - 14644861
Alignment:
Q  98 ttgtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaata 197  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||| | |||||    
T  14644753 ttgtttggatcgaatgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatcctt------gtacaaacttagaaata 14644846  T
Q  198 tgttctcaatgagaa 212  Q
    |||||||||||||||    
T  14644847 tgttctcaatgagaa 14644861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 32817967 - 32817880
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagttatctctttgtgaggtgattgtttggatcgaatgtctcaaacaaaaata 88  Q
    ||||| ||||||||||||||||||||||||||||||||||  | ||||||  | |||||||||||||| |  ||||||||||||||||    
T  32817967 tatcttaaactattaagcccaatagacttgagatctagtttacactttgtaggatgattgtttggatctagcgtctcaaacaaaaata 32817880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 206
Target Start/End: Complemental strand, 32817910 - 32817802
Alignment:
Q  98 ttgtttggatctagcgtctcaaacaaaagatgtgtaggatgttgtttggaactttatatgtcaaacaaactatccttgtatgagtacaaactcataaata 197  Q
    ||||||||||||||||||||||||||||    ||||| |||||||||| | ||||   | ||||||||||||||||| ||  | |||||||||| ||| |    
T  32817910 ttgtttggatctagcgtctcaaacaaaaatattgtagaatgttgtttgaatctttgcgtctcaaacaaactatccttttacaaatacaaactcaaaaaga 32817811  T
Q  198 tgttctcaa 206  Q
    |||||||||    
T  32817810 tgttctcaa 32817802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14777395 - 14777359
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  14777395 tatctcaaactattaagcccaatagacttgagatcta 14777359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15229533 - 15229497
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatcta 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  15229533 tatctcaaactattaagcccaatagacttgagatcta 15229497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48711498 - 48711535
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctag 38  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  48711498 tatctcaaactattaagcacaatagacttgagacctag 48711535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 11634546 - 11634578
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  11634546 tatctcaaactattcagcccaatagacttgaga 11634578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2411 - 2450
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2411 tatctcaaactattaagcccaatagacttgagatctagtt 2450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 24569 - 24533
Alignment:
Q  5 tcaaactattaagcccaatagacttgagatctagtta 41  Q
    |||||||||||| ||||||||||||||||||||||||    
T  24569 tcaaactattaaacccaatagacttgagatctagtta 24533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12698 - 12737
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgagatctagtt 40  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  12698 tatctcaaactattacgcccaatagacttgagaactagtt 12737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 256929 - 256897
Alignment:
Q  1 tatctcaaactattaagcccaatagacttgaga 33  Q
    |||||||||||||| ||||||||||||||||||    
T  256929 tatctcaaactattcagcccaatagacttgaga 256897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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