View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18796_high_56 (Length: 225)

Name: NF18796_high_56
Description: NF18796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18796_high_56
NF18796_high_56
[»] chr5 (11 HSPs)
chr5 (49-212)||(16470357-16470518)
chr5 (49-148)||(24924293-24924392)
chr5 (49-136)||(22010851-22010937)
chr5 (49-136)||(36196933-36197019)
chr5 (49-136)||(25769505-25769591)
chr5 (74-136)||(22969736-22969798)
chr5 (18-59)||(16470309-16470350)
chr5 (51-145)||(16075308-16075399)
chr5 (81-148)||(23779414-23779480)
chr5 (81-148)||(23866367-23866433)
chr5 (81-145)||(17810998-17811062)
[»] chr2 (14 HSPs)
chr2 (49-148)||(27598039-27598138)
chr2 (49-145)||(13821692-13821789)
chr2 (49-135)||(23780429-23780514)
chr2 (49-148)||(22801344-22801442)
chr2 (49-146)||(25576435-25576531)
chr2 (49-145)||(20478556-20478652)
chr2 (49-148)||(27861261-27861359)
chr2 (49-136)||(28144241-28144327)
chr2 (49-136)||(28141555-28141641)
chr2 (51-145)||(25568756-25568847)
chr2 (51-145)||(11323467-11323558)
chr2 (49-136)||(27190307-27190393)
chr2 (49-136)||(27840121-27840207)
chr2 (77-146)||(20489611-20489682)
[»] scaffold0031 (1 HSPs)
scaffold0031 (49-148)||(38085-38184)
[»] chr1 (5 HSPs)
chr1 (49-148)||(25401485-25401584)
chr1 (51-148)||(10159085-10159182)
chr1 (52-136)||(18523228-18523312)
chr1 (73-116)||(20886344-20886387)
chr1 (74-148)||(21291299-21291372)
[»] chr8 (10 HSPs)
chr8 (49-148)||(23817903-23818004)
chr8 (49-147)||(23242058-23242155)
chr8 (48-145)||(9006679-9006776)
chr8 (50-145)||(921428-921523)
chr8 (49-121)||(21301601-21301672)
chr8 (51-114)||(15927747-15927809)
chr8 (49-148)||(17983106-17983204)
chr8 (51-148)||(22263735-22263829)
chr8 (49-136)||(24093488-24093573)
chr8 (51-116)||(22814918-22814981)
[»] chr7 (14 HSPs)
chr7 (58-146)||(21668548-21668636)
chr7 (49-148)||(18098549-18098648)
chr7 (49-150)||(17881360-17881460)
chr7 (49-145)||(12330711-12330807)
chr7 (49-128)||(9560718-9560797)
chr7 (49-148)||(17115185-17115283)
chr7 (71-146)||(20923114-20923189)
chr7 (51-145)||(15124890-15124981)
chr7 (83-148)||(7965587-7965652)
chr7 (51-145)||(17132286-17132376)
chr7 (74-148)||(7404794-7404867)
chr7 (74-115)||(14960946-14960987)
chr7 (74-115)||(15390418-15390459)
chr7 (18-59)||(18098501-18098542)
[»] chr6 (15 HSPs)
chr6 (49-145)||(31137589-31137685)
chr6 (49-139)||(17863525-17863614)
chr6 (48-145)||(25945595-25945692)
chr6 (68-146)||(15966268-15966348)
chr6 (49-149)||(21375824-21375923)
chr6 (51-148)||(18376740-18376834)
chr6 (49-104)||(20194588-20194642)
chr6 (49-104)||(22088611-22088665)
chr6 (51-145)||(34500977-34501068)
chr6 (51-116)||(23010752-23010815)
chr6 (49-116)||(12410330-12410396)
chr6 (51-108)||(23591042-23591097)
chr6 (49-114)||(18560541-18560605)
chr6 (51-114)||(20228710-20228771)
chr6 (51-114)||(22122694-22122755)
[»] chr4 (4 HSPs)
chr4 (49-136)||(10070346-10070432)
chr4 (49-148)||(12810246-12810344)
chr4 (49-136)||(14633012-14633098)
chr4 (49-136)||(11889748-11889834)
[»] chr3 (4 HSPs)
chr3 (50-148)||(22928244-22928341)
chr3 (49-145)||(16226954-16227049)
chr3 (49-128)||(16224355-16224433)
chr3 (49-136)||(13908478-13908564)
[»] scaffold0009 (2 HSPs)
scaffold0009 (49-146)||(50127-50223)
scaffold0009 (49-146)||(222396-222492)
[»] scaffold0004 (2 HSPs)
scaffold0004 (52-149)||(376736-376832)
scaffold0004 (51-145)||(370102-370192)
[»] scaffold0338 (1 HSPs)
scaffold0338 (49-145)||(16982-17078)
[»] scaffold0005 (1 HSPs)
scaffold0005 (49-136)||(184194-184280)
[»] scaffold0210 (2 HSPs)
scaffold0210 (49-148)||(18011-18109)
scaffold0210 (49-148)||(25903-26001)
[»] scaffold0099 (1 HSPs)
scaffold0099 (61-148)||(37492-37581)
[»] scaffold0056 (2 HSPs)
scaffold0056 (49-145)||(20754-20849)
scaffold0056 (51-110)||(54757-54814)
[»] scaffold0054 (1 HSPs)
scaffold0054 (51-148)||(77200-77294)
[»] scaffold0194 (1 HSPs)
scaffold0194 (74-143)||(31541-31609)


Alignment Details
Target: chr5 (Bit Score: 115; Significance: 1e-58; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 49 - 212
Target Start/End: Original strand, 16470357 - 16470518
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||   |||||||||||||||||||||||||||    
T  16470357 tcaaaacctttacacaacatgattctgagatctctagttcggtctcgcttgtaataataagaactagttc---gtttgccaaaaacacaggcaaacaaat 16470453  T
Q  149 atac-ttttaagtttggtccctcctaaaggctccgtcccggagtaagattttttctaccacaggt 212  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  16470454 atactttttaagtttggtccctcctaaaggctccgtccccgagtaagattttttctaccataggt 16470518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 24924293 - 24924392
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| | ||||||||||| |||||| ||||||||||||    
T  24924293 tcaaaacttttgcacaacatgctcctgagatctctagttcggtttcgcttgtaataatcagaactaacccgtagtttgccgaaaacataggcaaacaaat 24924392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 22010937 - 22010851
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||    
T  22010937 tcaaaacctttgcacaacatg-tcctgagatttctagttcggtctcgcttgtaataatcaaaactagcccgtagtttcccgaaaacac 22010851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 36196933 - 36197019
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||| ||||||| |||||| |||| |||||||    
T  36196933 tcaaaacctttgcacaacatg-tcctgtgatttctagttcggtcccgcttgtaataatcagaactagcccgtagtatgccgaaaacac 36197019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 25769591 - 25769505
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    |||||||||||| |||||||| ||||| ||| |||||||||||| | ||||||||||||| ||||||| ||||||||| | |||||||    
T  25769591 tcaaaacctttggacaacatg-tcctgggatttctagttcggtccctcttgtaataatcagaactagcccgtagtttgtcgaaaacac 25769505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 22969736 - 22969798
Alignment:
Q  74 tgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    |||||| |||||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||    
T  22969736 tgagatatctagttcggtctcgcttgtaatagtcagaactagcccgtaatttgccaaaaacac 22969798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 16470309 - 16470350
Alignment:
Q  18 taagtaacctgagtgcttctcgtggccgttttcaaaaccttt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16470309 taagtaacctgagtgcttctcgtggccgttttcaaaaccttt 16470350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 16075399 - 16075308
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||||||||  | || |||||| ||||||| ||| |||||||||||||||| ||||||| |   ||||||||||| ||||||||||||    
T  16075399 aaaacctttgcacaac--ggtcttgagatttctagtttggtttcgcttgtaataatcagaactagc-ccccgtttgccaaaaccacaggcaaaca 16075308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 23779414 - 23779480
Alignment:
Q  81 tctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||| |||||||||||||||||| ||||||| |   ||||||||||| |||||||||||||||    
T  23779414 tctagttcgatctcgcttgtaataatcagaactagc-ctctgtttgccaaaatcacaggcaaacaaat 23779480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 23866367 - 23866433
Alignment:
Q  81 tctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||| |||||||||||||||||| ||||||| |   ||||||||||| |||||||||||||||    
T  23866367 tctagttcgatctcgcttgtaataatcagaactagc-ctctgtttgccaaaatcacaggcaaacaaat 23866433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 17810998 - 17811062
Alignment:
Q  81 tctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||| |||||||||||||||||| |  |||| ||||||||  ||||||||| || |||||    
T  17810998 tctagttcgatctcgcttgtaataatcagagttagcccgtagtttatcaaaaacactggtaaaca 17811062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 27598039 - 27598138
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  27598039 tcaaaacctttgcacaacatgctcctgagatctctagttcggtctcacttgtaataatcagaactagcctgtagtttgccaaaaacacaggcaaacaaat 27598138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 13821789 - 13821692
Alignment:
Q  49 tcaaaaccttt-gcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||| |||||||||    
T  13821789 tcaaaaccttttgcacaacatgctcctgagatctctagttcggtctcgcttgtaataatcagaactagcccgtagttttccgaaaacataggcaaaca 13821692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 23780514 - 23780429
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaaca 135  Q
    ||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  23780514 tcaaaacctttgcacaacatg-tcctgagatttccagttcggtctcgcttgtaataatcagaactagcccgtagtttgccgaaaaca 23780429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 22801442 - 22801344
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||| ||| |||| |||| |||| ||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||    
T  22801442 tcaaaacctttgcacaatatg-tcctaagatttctaattcggtctcacttgtaataatcagaactagcccgtagtttgccgaaaacacaggtaaacaaat 22801344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 25576531 - 25576435
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaa 146  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| || |||| ||||||||||  ||||||| || ||||||    
T  25576531 tcaaaacctttgcacagcatg-tcctgagatttctagttcggtctcgcttgtaataatcagaattagcccgtagtttgcagaaaacaccggtaaacaa 25576435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 20478556 - 20478652
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||   |||||||||||| ||||| |  |||||||||| ||||||| ||||||||    
T  20478556 tcaaaacctttgcacaacatgctcctaagatctctagttcggtctgaattgtaataatcagaactaacctgtagtttgcctaaaacactggcaaaca 20478652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 27861261 - 27861359
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||| |||||| |||||||| |||||||  |||||||||| |||||||||  ||||||||    
T  27861261 tcaaaacctttgcacaacatg-tcctgggatttctagttcggtcccgcttggaataatcagaactagcctgtagtttgccgaaaacacagttaaacaaat 27861359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 28144327 - 28144241
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||||||||||||| || |||  | | | |||||||||||||||||||||||| ||||| ||||||||||||| |||||||    
T  28144327 tcaaaacctttgcacaacatg-tcttgaattttttggttcggtctcgcttgtaataatcagaactaactcgtagtttgccgaaaacac 28144241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 28141555 - 28141641
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||||||||||||| |||||| || | | ||||| || | ||||||||||||| ||||| ||||||||||||| |||||||    
T  28141555 tcaaaacctttgcacaacatg-tcctgaaatttttggttcgatcccacttgtaataatcagaactaactcgtagtttgccgaaaacac 28141641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 25568756 - 25568847
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||||||||  | || |||||| ||||||||| ||||| |||||||||||| ||||||| |   ||||||||||| ||||||||||||    
T  25568756 aaaacctttgcacaac--ggtcttgagatttctagttcgatctcgattgtaataatcagaactagc-ccccgtttgccaaaatcacaggcaaaca 25568847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 11323558 - 11323467
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    |||||||||||||| |||  || |||||| ||||||||| |||  ||||||||||||| | ||||| | | ||||||||||| ||||||||||||    
T  11323558 aaaacctttgcacagcat--tcttgagatttctagttcgatctaacttgtaataatcagagctagccc-tcgtttgccaaaatcacaggcaaaca 11323467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 27190307 - 27190393
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||| |||||||||||| ||||| |||| ||||||||| ||||||  || ||||||  ||||||| | ||||||||| |||||||    
T  27190307 tcaaaacatttgcacaacat-atcctaagatttctagttcgatctcgcacgttataatctgaactagcccatagtttgccgaaaacac 27190393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 27840121 - 27840207
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||| |||||||||||| ||||| |||| ||||||||| ||||||  || ||||||  ||||||| | ||||||||| |||||||    
T  27840121 tcaaaacatttgcacaacat-atcctaagatttctagttcgatctcgcacgttataatctgaactagcccatagtttgccgaaaacac 27840207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 20489611 - 20489682
Alignment:
Q  77 gatctctagttcggtctcgcttgtaataatcaaaactagctcgta--gtttgccaaaaacacaggcaaacaa 146  Q
    ||||||| ||| |||||  ||||||||||||||||||| | ||||  |||| |||||||||| |||||||||    
T  20489611 gatctctggtttggtctttcttgtaataatcaaaactatcccgtattgtttaccaaaaacaccggcaaacaa 20489682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 38184 - 38085
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||| ||||||||||| ||| |||||||||||||||    
T  38184 tcaaaatctttgcacaacatgctcctgagatttctagttcggtctcgtttgtaataatcagaactagcccgtagtttgccgaaagcacaggcaaacaaat 38085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 25401584 - 25401485
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||| |||||||| || |||||| ||||||||||||    
T  25401584 tcaaaacctttgcacaacatgctcctgagatctgtagttcggtatcgcttgtaataatcagaactagcccgtagttttccgaaaacataggcaaacaaat 25401485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 10159085 - 10159182
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| ||| | ||||||| ||| |||||  |||||||||| |||||||||    
T  10159085 aaaacctttgcacaacatactcctgagatctctagttcggtctcgcttgtaagaattagaactagcccgtggtttgttaaaaacacagacaaacaaat 10159182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 18523228 - 18523312
Alignment:
Q  52 aaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    |||||||||||||||||| |||| |||| ||||||||| |||||||||||||||||| || ||||  |||||||||| |||||||    
T  18523228 aaacctttgcacaacatgctcctaagatttctagttcgatctcgcttgtaataatcagaattagcctgtagtttgccgaaaacac 18523312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 20886387 - 20886344
Alignment:
Q  73 ctgagatctctagttcggtctcgcttgtaataatcaaaactagc 116  Q
    |||||||||||||||||||||| ||||||| ||||| |||||||    
T  20886387 ctgagatctctagttcggtctcacttgtaacaatcagaactagc 20886344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 21291299 - 21291372
Alignment:
Q  74 tgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    |||||| ||||||||| ||||| |||||||||||| ||||||| |   |||| |||||| |||||||||||||||    
T  21291299 tgagatttctagttcgatctcgattgtaataatcagaactagc-ccacgttttccaaaatcacaggcaaacaaat 21291372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 23818004 - 23817903
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtct--cgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaa 146  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||| |||||||| ||||| ||    
T  23818004 tcaaaacctttgcacaacatgctcctgagatctctagttcggtctcgcgcttgtaataatcagaactagcccgtagtttgccgaaaacacatgcaaataa 23817905  T
Q  147 at 148  Q
    ||    
T  23817904 at 23817903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 23242155 - 23242058
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaa 147  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||||| || |||||||    
T  23242155 tcaaaacctttgcacaacatg-tcctgagatttctagttcggtcttgcttgtaataatcagaacaagcccgtagtttgccaaaaacaccggtaaacaaa 23242058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 9006776 - 9006679
Alignment:
Q  48 ttcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    |||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||| ||||||||| ||| |||| | |||||||||    
T  9006776 ttcaaaacctttgcacaacatgcttctgagatctctagttcagtctcgcttgtaataatcagaactaactcgtagttagccgaaaatagaggcaaaca 9006679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 50 - 145
Target Start/End: Original strand, 921428 - 921523
Alignment:
Q  50 caaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    |||||||||||||||||||| ||| |||||||||| |||||||| |||||||||||||| ||||||| ||||||||||  |||||||| |||||||    
T  921428 caaaacctttgcacaacatgctcccgagatctctacttcggtcttgcttgtaataatcagaactagcccgtagtttgctgaaaacacatgcaaaca 921523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 21301601 - 21301672
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgta 121  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  21301601 tcaaaacctttgtacaacatg-tcctgagatttctagttcggtctcgcttgtaataatcagaactagcccgta 21301672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 15927747 - 15927809
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaacta 114  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||    
T  15927747 aaaacctttgcacaacgtg-tcctgagatctctagttcggtctcgcttgtaataaacagaacta 15927809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 17983204 - 17983106
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| ||||||||| |||| ||| |||||| ||||||| |||| ||||||| | ||||||||| ||||| || | ||||||||    
T  17983204 tcaaaacctttgcacaacatg-tcctgagatttctacttcagtctcgtttgtaattatcataactagcccatagtttgccgaaaacccaagtaaacaaat 17983106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 22263829 - 22263735
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    |||||||||||||||||   || |||||| |||| |||||||||||||||||| |||| ||||||| | | ||||||||||| |||||||||||||||    
T  22263829 aaaacctttgcacaacag--tcttgagatttctaattcggtctcgcttgtaatgatcagaactagc-catcgtttgccaaaatcacaggcaaacaaat 22263735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 24093488 - 24093573
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||| ||||||||| || |||||| | |||||||| |||||| |||||||||| ||||| | ||||||||  |||||||||    
T  24093488 tcaaaaccttttcacaacatg-tcttgagatttatagttcggcctcgct-gtaataatcagaactaacccgtagtttttcaaaaacac 24093573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 22814981 - 22814918
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagc 116  Q
    ||||||||||||||||  | || |||||| ||||||||  |||||||||||||||||| |||||||    
T  22814981 aaaacctttgcacaac--ggtcttgagatttctagttcaatctcgcttgtaataatcagaactagc 22814918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 58 - 146
Target Start/End: Complemental strand, 21668636 - 21668548
Alignment:
Q  58 ttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaa 146  Q
    |||||||||||| || |||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  21668636 ttgcacaacatgctcatgagatctctagtttggtctcgcttgtaataatcagaactagcatgtagtttgccaaaaacacaggcaaacaa 21668548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 18098549 - 18098648
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||  ||||||| ||||    
T  18098549 tcaaaacctatgcacaacatgctcctgagatctctagttcagtctcgcttgtaataatcataactaacccgtagtttgccaaaaacgtaggcaaaaaaat 18098648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 17881360 - 17881460
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||| || |||||||  | ||||||||    
T  17881360 tcaaaacctttgcacaacatg-tcctgagatttctagttcggtctcgcttgtaataatcataactagcccgtagtttaccgaaaacaccagtaaacaaat 17881458  T
Q  149 at 150  Q
    ||    
T  17881459 at 17881460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 12330807 - 12330711
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||| |||||||| |  ||||||||||||||||    
T  12330807 tcaaaatctttgcacaacatgctcctaagatctctagttcggtctcgcttgtgataatcagaactagcccgtagttttctgaaaacacaggcaaaca 12330711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 9560718 - 9560797
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgcc 128  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  9560718 tcaaaacctttgcacaacatgcccttgagatctctagttcggtctcgcttgtgataatcagaactagcttgtagtttgcc 9560797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 17115185 - 17115283
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||| || |||| ||| |||| ||||||  ||||||||||||||| ||||||| ||||||||||| ||||||| || ||||||||    
T  17115185 tcaaaacctttgcacaacaaga-cctgggatttctatttcggttccgcttgtaataatcagaactagcccgtagtttgccgaaaacaccggtaaacaaat 17115283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 20923189 - 20923114
Alignment:
Q  71 tcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaa 146  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||||||| || ||||||| || ||||||    
T  20923189 tcctgagatttttagttcggtctcgcttgtaataatcagaactagctcgtagttttccgaaaacaccggtaaacaa 20923114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 15124981 - 15124890
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||||||||  | || |||||| ||||||||| |||||||||||||||||| ||||||| |  | |||||||||| ||||||||||||    
T  15124981 aaaacctttgcacaac--ggtcttgagatttctagttcgatctcgcttgtaataatcagaactagccccca-tttgccaaaatcacaggcaaaca 15124890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 7965652 - 7965587
Alignment:
Q  83 tagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||| |||||||||||  ||||||| ||||||||||| ||||||| || ||||||||    
T  7965652 tagttcggtctcgtttgtaataatctgaactagcccgtagtttgccgaaaacactggtaaacaaat 7965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 17132376 - 17132286
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||||||||  | || |||||| ||||||| | || ||||||||||||||||||||||| |   ||||||||||| ||||||||||||    
T  17132376 aaaacctttgcacaac--ggtcttgagatttctagttagttcgcgcttgtaataatcaaaactagccc--cgtttgccaaaatcacaggcaaaca 17132286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 7404794 - 7404867
Alignment:
Q  74 tgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    |||||| ||||||||||||||  |||||||||||| ||||||| | | ||||||||||| |||| | ||||||||    
T  7404794 tgagatttctagttcggtctccattgtaataatcagaactagcccat-gtttgccaaaatcacaagtaaacaaat 7404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 14960987 - 14960946
Alignment:
Q  74 tgagatctctagttcggtctcgcttgtaataatcaaaactag 115  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  14960987 tgagatttctagttcgatctcgcttgtaataatcagaactag 14960946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 15390459 - 15390418
Alignment:
Q  74 tgagatctctagttcggtctcgcttgtaataatcaaaactag 115  Q
    |||||| ||||||||| |||||||||||||||||| ||||||    
T  15390459 tgagatttctagttcgatctcgcttgtaataatcagaactag 15390418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 18098501 - 18098542
Alignment:
Q  18 taagtaacctgagtgcttctcgtggccgttttcaaaaccttt 59  Q
    |||||||||||||||| ||| |||||| ||||||||||||||    
T  18098501 taagtaacctgagtgcatcttgtggccattttcaaaaccttt 18098542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 31137589 - 31137685
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    |||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||  ||||||||||||||||    
T  31137589 tcaaaacctttgcacaacgtgctcctgagatctctagtccggtctcgcttgtaacaatcagaactacctcgtagtttgctgaaaacacaggcaaaca 31137685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 139
Target Start/End: Original strand, 17863525 - 17863614
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacagg 139  Q
    |||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||||| ||||||| |||| |||||||||||||||||    
T  17863525 tcaaaacctttgcaaaacatg-tcctgagatttctagttcggtatcgcttgtaataatcagaactagcccgtaatttgccaaaaacacagg 17863614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 25945692 - 25945595
Alignment:
Q  48 ttcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||| ||||||||||||  | |||||||||||||||||||| |||||||||||||| |||||||  |||||||||| |||||| |||||||||    
T  25945692 ttcaaaaccattgcacaacatgcccttgagatctctagttcggtcttgcttgtaataatcagaactagcctgtagtttgccgaaaacataggcaaaca 25945595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 15966348 - 15966268
Alignment:
Q  68 tgatcctgagatctctagttcggtctcgctt--gtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaa 146  Q
    ||||||| ||||||||||||||||||||| |  |||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  15966348 tgatcctaagatctctagttcggtctcgcatatgtaataatcagaactagcccgtagtttgtcaaaaacacaggcaaacaa 15966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 21375923 - 21375824
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| || |||||| |||||||||||||| |||  || ||||| |||| || ||||||||||| |||||||||| ||||||||    
T  21375923 tcaaaacctttgcacaacatg-tcttgagatttctagttcggtctcactttcaacaatcagaactggcccgtagtttgccgaaaacacaggtaaacaaat 21375825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 18376740 - 18376834
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||  | || ||| || ||||||||| ||||||| |||||||||| ||||||||| | ||||||||||| |||||||||||||||    
T  18376740 aaaacctttgcacaac--ggtcttgacatttctagttcgatctcgctagtaataatcagaactagctcct-gtttgccaaaatcacaggcaaacaaat 18376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 20194642 - 20194588
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaata 104  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  20194642 tcaaaacctttgcacaacatg-tcctgagatttttagttcggtctcgcttgtaata 20194588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 22088665 - 22088611
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaata 104  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  22088665 tcaaaacctttgcacaacatg-tcctgagatttttagttcggtctcgcttgtaata 22088611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 34501068 - 34500977
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    |||||||||||||||||   || |||||| ||||| ||| |||||||||||||||||| ||||||| |   ||||||||||| ||||||||||||    
T  34501068 aaaacctttgcacaacag--tcttgagatttctagatcgatctcgcttgtaataatcagaactagc-ccccgtttgccaaaatcacaggcaaaca 34500977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 23010752 - 23010815
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagc 116  Q
    ||||||||||||  ||||| || |||||| ||||||| |||||||||||||||||||| |||||||    
T  23010752 aaaacctttgca--acatggtcttgagatttctagtttggtctcgcttgtaataatcagaactagc 23010815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 12410396 - 12410330
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagc 116  Q
    ||||||||||||||||||||| || |||||| | || |||||||| |||||||||||| | |||||||    
T  12410396 tcaaaacctttgcacaacatg-tcgtgagatttttaattcggtcttgcttgtaataattagaactagc 12410330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 23591042 - 23591097
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatca 108  Q
    ||||||||||||||||  | || |||||| ||||||||| ||||||||||||||||||    
T  23591042 aaaacctttgcacaac--ggtcttgagatttctagttcgatctcgcttgtaataatca 23591097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 18560541 - 18560605
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaacta 114  Q
    ||||||||||||||||||||| |||| | || ||||||||  ||| |||||||||||||| |||||    
T  18560541 tcaaaacctttgcacaacatg-tcctaaaatttctagttctatcttgcttgtaataatcataacta 18560605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 20228771 - 20228710
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaacta 114  Q
    ||||||||||||||||  | || |||||| ||||||||| | |||||||||||||||| |||||    
T  20228771 aaaacctttgcacaac--ggtcttgagatttctagttcgatatcgcttgtaataatcataacta 20228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 22122755 - 22122694
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaacta 114  Q
    ||||||||||||||||  | || |||||| ||||||||| | |||||||||||||||| |||||    
T  22122755 aaaacctttgcacaac--ggtcttgagatttctagttcgatatcgcttgtaataatcataacta 22122694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 9e-26; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 10070432 - 10070346
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  10070432 tcaaaacctttgcacaacatg-tcctaagatttctagttcggtctcgcttgtaataatcataactagctcgttgtttgccgaaaacac 10070346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 12810246 - 12810344
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| |||||| || | |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| || ||||||||    
T  12810246 tcaaaacctttgcacaacatg-tcctgatatttttagttcggtctcgcttgtaataatcagaactagcccgtagtttgccgaaaacaccggtaaacaaat 12810344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 14633012 - 14633098
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||||||||||||| || |||||| ||||||| |||||||||||||||||||| ||||||| |||||||| || |||||||    
T  14633012 tcaaaacctttgcacaacatg-tcatgagatttctagtttggtctcgcttgtaataatcagaactagcccgtagttttccgaaaacac 14633098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 11889748 - 11889834
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||||  ||||||||||||| ||||| | ||||||||||| |||||||    
T  11889748 tcaaaacctttacacaacatg-tcctgagatttctagttcggtcttacttgtaataatcagaactaacccgtagtttgccgaaaacac 11889834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 22928341 - 22928244
Alignment:
Q  50 caaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||| | ||||||| || ||||||||    
T  22928341 caaaacctttgcacaacatg-tcctgagatttctagttcgttctcgcttgtaataatcagaactagcccgtagtttgtcgaaaacaccggtaaacaaat 22928244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 16226954 - 16227049
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||||| |||||||| || ||||||| || |||||    
T  16226954 tcaaaacatttgcacaacatg-tcctgagatttctagttcggtctcgtttgtaataatcagaactagcccgtagttttccgaaaacaccggtaaaca 16227049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 16224355 - 16224433
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgcc 128  Q
    ||||||||||||||||||||| || ||| || ||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16224355 tcaaaacctttgcacaacatg-tcttgaaatttctagttcggtatcgcttgtaataatcaaaactagcacgtagtttgcc 16224433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 13908564 - 13908478
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    |||||||||| |||| ||||| ||||||||| |||||||||||| ||||||||||||||| | ||||| ||||||||||| |||||||    
T  13908564 tcaaaaccttcgcactacatg-tcctgagatttctagttcggtcccgcttgtaataatcagatctagcccgtagtttgccgaaaacac 13908478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 50223 - 50127
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaa 146  Q
    ||||||||||||||||||||| || |||||| ||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||| || ||||||    
T  50223 tcaaaacctttgcacaacatg-tcatgagatttctagctcggtctcgcttgtaataatcagaactagcccgtagtttgtcaaaaacaccggtaaacaa 50127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 222492 - 222396
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaa 146  Q
    ||||||| ||||||||||||| || |||||| |||||||||||||||||||||||||||| ||||||| ||| ||||||  ||||||| || ||||||    
T  222492 tcaaaacatttgcacaacatg-tcttgagatttctagttcggtctcgcttgtaataatcagaactagcccgttgtttgctgaaaacaccggtaaacaa 222396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 52 - 149
Target Start/End: Complemental strand, 376832 - 376736
Alignment:
Q  52 aaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaata 149  Q
    |||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||| || |||||||||    
T  376832 aaacctttgcacaacatgttc-tgagatttctagttcggtctcgcttgtaaaaatcagaactagcccatagtttgccaaaaacaccggtaaacaaata 376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 370102 - 370192
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||||||||||  || |||||| ||||||||| |||||||||||||||||| ||||||| |   ||||||||||| ||||||||||||    
T  370102 aaaacctttgcacaacat--tcttgagatttctagttcgatctcgcttgtaataatcagaactagccc--cgtttgccaaaatcacaggcaaaca 370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 145
Target Start/End: Complemental strand, 17078 - 16982
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||| |||||||||||||  | |||||||||||||||| | | |||||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  17078 tcaaaacatttgcacaacatgcccatgagatctctagttcgattttgcttgtaataatcagaactagcccgtagtttgccgaaaacacaggcaaaca 16982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 184280 - 184194
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacac 136  Q
    ||||||||||||||||||||| || |||||| ||||||| |||||||||||||||||||| ||||||| |||||||| || |||||||    
T  184280 tcaaaacctttgcacaacatg-tcatgagatttctagtttggtctcgcttgtaataatcagaactagcccgtagttttccgaaaacac 184194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 18109 - 18011
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| || ||  || ||||||||| || ||||||||||||||| |||||||  |||||||||| ||||||| || ||||||||    
T  18109 tcaaaacctttgcacaacatg-tcgtggaatttctagttcgatcccgcttgtaataatcagaactagcctgtagtttgccgaaaacaccggtaaacaaat 18011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 26001 - 25903
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||||||| || ||  || ||||||||| || ||||||||||||||| |||||||  |||||||||| ||||||| || ||||||||    
T  26001 tcaaaacctttgcacaacatg-tcgtggaatttctagttcgatcccgcttgtaataatcagaactagcctgtagtttgccgaaaacaccggtaaacaaat 25903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 37492 - 37581
Alignment:
Q  61 cacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaact-agctcgtagtttg-ccaaaaacacaggcaaacaaat 148  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||| |||| | | ||||||||| || |||||| ||||||||||||    
T  37492 cacaacatgctcctgagatctctagttcggtttcgcttataataatcagaactaaccccgtagtttgtccgaaaacataggcaaacaaat 37581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 20754 - 20849
Alignment:
Q  49 tcaaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaaca 145  Q
    ||||||||||| ||||||||| |||| |||| ||| ||||| ||||||||| |||||| | ||||||| ||||||||||| ||||||| || |||||    
T  20754 tcaaaaccttttcacaacatg-tcctaagatttcttgttcgatctcgcttggaataataagaactagcccgtagtttgccgaaaacaccggtaaaca 20849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 54757 - 54814
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaa 110  Q
    ||||||||||||||||  | || |||||| |||||||| | |||||||||||||||||||    
T  54757 aaaacctttgcacaac--ggtcttgagatttctagttccgcctcgcttgtaataatcaaa 54814  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 77200 - 77294
Alignment:
Q  51 aaaacctttgcacaacatgatcctgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaacaaat 148  Q
    ||||||||||||||||  | || |||||| ||||||||  || |||||||||||||| |||||||| | | ||||||||||| |||||| ||||||||    
T  77200 aaaacctttgcacaac--ggtcttgagatttctagttcaatcccgcttgtaataatccaaactagcccct-gtttgccaaaatcacaggtaaacaaat 77294  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 143
Target Start/End: Complemental strand, 31609 - 31541
Alignment:
Q  74 tgagatctctagttcggtctcgcttgtaataatcaaaactagctcgtagtttgccaaaaacacaggcaaa 143  Q
    |||||| ||||| ||| |||||||||||||||||| ||||||| | | ||||| ||||| ||||||||||    
T  31609 tgagatttctagctcgatctcgcttgtaataatcataactagcccct-gtttgtcaaaatcacaggcaaa 31541  T

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