View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18796_low_42 (Length: 267)
Name: NF18796_low_42
Description: NF18796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18796_low_42 |
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Alignment Details
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 28221338 - 28221478
Alignment:
| Q |
29 |
atatgcttgtgagttgtgacttgacctaacaattgtatgaagaaaagacaaacttaacaggctagtttcacgagttagttttttaataagataatgggca |
128 |
Q |
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| T |
28221338 |
atatgcttgtgagttgtgacttgacctaacaattgtatgaagaaaagacaaacttaacaggctagtttcatgagttagttttttaataagatgatgggca |
28221437 |
T |
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| Q |
129 |
gcacaacgtatcctaaagtctaagagtctgtttggttcaac |
169 |
Q |
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| T |
28221438 |
gcacaacgtatcctaaagcctaagagtccgtttggttcaac |
28221478 |
T |
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