View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18798_high_1 (Length: 537)

Name: NF18798_high_1
Description: NF18798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18798_high_1
NF18798_high_1
[»] chr5 (69 HSPs)
chr5 (1-527)||(1649014-1649540)
chr5 (390-511)||(25456276-25456399)
chr5 (343-450)||(25456500-25456608)
chr5 (395-514)||(35813517-35813638)
chr5 (328-420)||(35461470-35461563)
chr5 (422-511)||(17400793-17400884)
chr5 (395-508)||(4943118-4943235)
chr5 (328-450)||(25456279-25456402)
chr5 (395-472)||(28559454-28559532)
chr5 (328-420)||(16327132-16327225)
chr5 (330-514)||(4943112-4943302)
chr5 (409-524)||(37032931-37033046)
chr5 (403-477)||(10827143-10827217)
chr5 (328-420)||(16327309-16327400)
chr5 (335-420)||(32361202-32361288)
chr5 (466-511)||(6588102-6588147)
chr5 (383-511)||(16327098-16327230)
chr5 (328-420)||(17400579-17400671)
chr5 (328-393)||(40980713-40980778)
chr5 (332-450)||(1996145-1996265)
chr5 (328-388)||(28559302-28559362)
chr5 (422-511)||(35461436-35461527)
chr5 (403-511)||(35461662-35461773)
chr5 (325-393)||(35461703-35461771)
chr5 (367-453)||(35813547-35813635)
chr5 (325-393)||(38680632-38680700)
chr5 (383-479)||(5746129-5746227)
chr5 (445-511)||(23661939-23662005)
chr5 (445-511)||(23796565-23796631)
chr5 (328-393)||(17400817-17400882)
chr5 (328-393)||(23661881-23661946)
chr5 (328-393)||(23796624-23796689)
chr5 (383-511)||(28559235-28559367)
chr5 (328-393)||(36759665-36759730)
chr5 (453-511)||(40980711-40980771)
chr5 (395-511)||(1996142-1996261)
chr5 (340-392)||(2377327-2377379)
chr5 (328-392)||(20928086-20928150)
chr5 (403-509)||(25456501-25456609)
chr5 (328-360)||(37643064-37643096)
chr5 (328-420)||(4943171-4943265)
chr5 (328-417)||(14604102-14604193)
chr5 (349-450)||(35461667-35461770)
chr5 (445-511)||(35813508-35813575)
chr5 (328-454)||(10827315-10827444)
chr5 (383-511)||(16327304-16327434)
chr5 (390-509)||(23661881-23662001)
chr5 (390-509)||(23796569-23796689)
chr5 (335-393)||(32361170-32361228)
chr5 (336-393)||(1996371-1996428)
chr5 (328-420)||(5746129-5746222)
chr5 (424-508)||(14604072-14604154)
chr5 (328-393)||(19550101-19550166)
chr5 (328-438)||(23661894-23662004)
chr5 (328-438)||(23796566-23796676)
chr5 (445-511)||(25456335-25456403)
chr5 (328-393)||(28559446-28559511)
chr5 (328-393)||(33491574-33491639)
chr5 (332-393)||(35461438-35461499)
chr5 (452-514)||(36760814-36760878)
chr5 (453-508)||(12712424-12712480)
chr5 (337-420)||(12713106-12713190)
chr5 (453-508)||(12773688-12773744)
chr5 (337-420)||(12774370-12774454)
chr5 (349-393)||(16327388-16327432)
chr5 (408-510)||(23662109-23662215)
chr5 (349-393)||(28559237-28559281)
chr5 (395-511)||(32361168-32361287)
chr5 (328-392)||(35813568-35813632)
[»] chr2 (35 HSPs)
chr2 (395-511)||(36217162-36217278)
chr2 (328-450)||(31630070-31630192)
chr2 (395-511)||(25895134-25895253)
chr2 (383-509)||(31630281-31630409)
chr2 (328-450)||(44556528-44556652)
chr2 (330-455)||(25895128-25895255)
chr2 (383-511)||(9500905-9501037)
chr2 (383-511)||(5009379-5009509)
chr2 (328-450)||(5009384-5009506)
chr2 (329-456)||(36217155-36217281)
chr2 (445-524)||(43699448-43699529)
chr2 (328-393)||(4188624-4188689)
chr2 (328-393)||(25895186-25895251)
chr2 (328-393)||(33847703-33847768)
chr2 (329-450)||(5009161-5009289)
chr2 (445-509)||(12612448-12612514)
chr2 (445-509)||(31630127-31630193)
chr2 (328-420)||(1316069-1316162)
chr2 (348-393)||(4511638-4511683)
chr2 (425-509)||(5009160-5009247)
chr2 (328-393)||(29379903-29379968)
chr2 (328-393)||(36694524-36694589)
chr2 (328-393)||(43699449-43699514)
chr2 (445-511)||(44556585-44556653)
chr2 (328-450)||(9500908-9501032)
chr2 (446-511)||(33847703-33847770)
chr2 (408-515)||(1316031-1316141)
chr2 (390-511)||(31630067-31630189)
chr2 (452-511)||(25895132-25895193)
chr2 (367-438)||(4511597-4511670)
chr2 (329-393)||(1316037-1316101)
chr2 (445-511)||(1316095-1316163)
chr2 (329-393)||(3876949-3877013)
chr2 (332-392)||(11791813-11791873)
chr2 (325-393)||(30265382-30265450)
[»] scaffold0002 (2 HSPs)
scaffold0002 (408-508)||(12277-12377)
scaffold0002 (383-516)||(12046-12180)
[»] chr6 (38 HSPs)
chr6 (383-511)||(24059667-24059797)
chr6 (328-450)||(21598448-21598572)
chr6 (328-510)||(35050736-35050917)
chr6 (328-420)||(17136878-17136971)
chr6 (367-524)||(10356248-10356409)
chr6 (410-524)||(35225385-35225502)
chr6 (383-511)||(21598651-21598783)
chr6 (328-392)||(9982673-9982737)
chr6 (328-450)||(21598656-21598780)
chr6 (328-450)||(35225401-35225525)
chr6 (424-508)||(9982673-9982759)
chr6 (383-517)||(9982875-9983013)
chr6 (422-510)||(35050712-35050802)
chr6 (390-479)||(17136878-17136968)
chr6 (328-393)||(9982940-9983005)
chr6 (328-393)||(10356263-10356328)
chr6 (383-511)||(10356467-10356599)
chr6 (328-393)||(21598716-21598781)
chr6 (408-524)||(21598432-21598551)
chr6 (383-514)||(363984-364117)
chr6 (453-512)||(35225457-35225518)
chr6 (328-420)||(10356295-10356388)
chr6 (328-393)||(10356532-10356597)
chr6 (328-420)||(17342651-17342744)
chr6 (445-511)||(21598505-21598573)
chr6 (328-393)||(24059727-24059792)
chr6 (383-509)||(17342646-17342776)
chr6 (445-508)||(17136907-17136972)
chr6 (328-393)||(9982732-9982797)
chr6 (328-420)||(9982880-9982973)
chr6 (328-393)||(17136846-17136911)
chr6 (328-393)||(21598447-21598512)
chr6 (328-393)||(35050598-35050663)
chr6 (367-450)||(35050715-35050800)
chr6 (328-393)||(35225400-35225465)
chr6 (445-481)||(2761493-2761529)
chr6 (328-360)||(2761496-2761528)
chr6 (328-438)||(10356472-10356584)
[»] chr3 (68 HSPs)
chr3 (390-511)||(18020035-18020159)
chr3 (328-454)||(46337501-46337629)
chr3 (395-511)||(47069528-47069647)
chr3 (330-393)||(47891392-47891455)
chr3 (328-480)||(25848508-25848662)
chr3 (390-516)||(47891333-47891462)
chr3 (403-524)||(40286473-40286597)
chr3 (328-450)||(252049-252173)
chr3 (425-513)||(25848285-25848375)
chr3 (397-511)||(25848518-25848635)
chr3 (328-450)||(25848568-25848693)
chr3 (328-389)||(40286244-40286305)
chr3 (403-508)||(46337505-46337613)
chr3 (383-513)||(40209880-40210010)
chr3 (383-509)||(252048-252178)
chr3 (403-511)||(26724238-26724347)
chr3 (330-393)||(39541441-39541504)
chr3 (334-450)||(39714575-39714693)
chr3 (383-476)||(40286275-40286370)
chr3 (343-420)||(25848321-25848399)
chr3 (383-480)||(40209709-40209806)
chr3 (424-511)||(47573695-47573784)
chr3 (348-440)||(47891122-47891216)
chr3 (371-450)||(3169716-3169797)
chr3 (328-393)||(14964892-14964956)
chr3 (328-393)||(26724280-26724345)
chr3 (330-449)||(30954957-30955078)
chr3 (330-449)||(30970769-30970890)
chr3 (445-511)||(36667289-36667357)
chr3 (328-393)||(36667290-36667355)
chr3 (445-511)||(40286298-40286366)
chr3 (328-393)||(47069530-47069595)
chr3 (328-393)||(47573697-47573762)
chr3 (445-508)||(7607695-7607759)
chr3 (328-450)||(18020032-18020156)
chr3 (328-392)||(27768369-27768433)
chr3 (395-507)||(30954963-30955078)
chr3 (395-507)||(30970775-30970890)
chr3 (430-511)||(32186462-32186545)
chr3 (466-511)||(32186703-32186750)
chr3 (331-453)||(28813838-28813961)
chr3 (338-393)||(39253793-39253848)
chr3 (348-394)||(13903094-13903140)
chr3 (334-424)||(40209706-40209796)
chr3 (328-417)||(40286275-40286365)
chr3 (328-421)||(43650017-43650111)
chr3 (334-392)||(47573911-47573969)
chr3 (408-498)||(47891122-47891215)
chr3 (445-509)||(14624256-14624321)
chr3 (390-479)||(14624260-14624348)
chr3 (445-511)||(18020031-18020099)
chr3 (328-393)||(18020092-18020157)
chr3 (328-393)||(25848289-25848354)
chr3 (328-393)||(26976506-26976571)
chr3 (328-393)||(27768308-27768373)
chr3 (328-393)||(28814068-28814133)
chr3 (445-511)||(36900083-36900151)
chr3 (328-393)||(40286517-40286582)
chr3 (328-420)||(47573729-47573822)
chr3 (445-511)||(47891329-47891397)
chr3 (328-420)||(47891330-47891423)
chr3 (349-421)||(50332664-50332737)
chr3 (328-393)||(50332703-50332768)
chr3 (383-498)||(36375008-36375124)
chr3 (328-450)||(36900084-36900208)
chr3 (458-509)||(39714642-39714694)
chr3 (349-393)||(45131441-45131485)
chr3 (330-440)||(47069541-47069653)
[»] chr8 (40 HSPs)
chr8 (328-443)||(15563855-15563971)
chr8 (395-511)||(27128093-27128212)
chr8 (395-511)||(41151405-41151524)
chr8 (328-438)||(27127892-27128001)
chr8 (328-450)||(6220393-6220517)
chr8 (408-479)||(24083263-24083334)
chr8 (395-529)||(9399798-9399935)
chr8 (330-392)||(41151679-41151741)
chr8 (383-511)||(24909609-24909741)
chr8 (408-509)||(27052625-27052729)
chr8 (337-450)||(27052613-27052728)
chr8 (328-451)||(41151616-41151742)
chr8 (383-511)||(20209465-20209597)
chr8 (328-420)||(20209470-20209563)
chr8 (383-511)||(20229173-20229305)
chr8 (328-420)||(20229178-20229271)
chr8 (390-511)||(24827357-24827481)
chr8 (328-420)||(24909614-24909707)
chr8 (328-393)||(24909674-24909739)
chr8 (367-478)||(27052443-27052556)
chr8 (328-393)||(41151407-41151472)
chr8 (395-511)||(6220401-6220520)
chr8 (328-419)||(27052443-27052535)
chr8 (328-423)||(36053057-36053153)
chr8 (329-420)||(41151439-41151531)
chr8 (458-513)||(9400109-9400166)
chr8 (421-508)||(27052471-27052560)
chr8 (383-511)||(27127878-27128006)
chr8 (422-509)||(27855559-27855648)
chr8 (445-512)||(22813116-22813176)
chr8 (460-508)||(24083256-24083305)
chr8 (343-429)||(24083257-24083344)
chr8 (390-517)||(6220177-6220307)
chr8 (453-511)||(27128092-27128153)
chr8 (328-393)||(24827359-24827424)
chr8 (328-393)||(27052664-27052729)
chr8 (383-509)||(36053052-36053181)
chr8 (445-508)||(15563848-15563912)
chr8 (458-511)||(27052616-27052671)
chr8 (408-508)||(38414597-38414699)
[»] chr7 (38 HSPs)
chr7 (336-455)||(6222078-6222198)
chr7 (328-450)||(11975451-11975574)
chr7 (328-393)||(29710322-29710387)
chr7 (328-420)||(30869610-30869703)
chr7 (328-440)||(46713224-46713337)
chr7 (395-511)||(6222080-6222198)
chr7 (328-455)||(27576541-27576670)
chr7 (367-511)||(29710320-29710467)
chr7 (331-420)||(27280822-27280912)
chr7 (331-393)||(41666357-41666419)
chr7 (445-511)||(6694739-6694807)
chr7 (328-393)||(6694740-6694805)
chr7 (445-511)||(11975507-11975575)
chr7 (328-420)||(27280648-27280741)
chr7 (383-511)||(27576536-27576668)
chr7 (383-511)||(29710525-29710657)
chr7 (383-511)||(44293977-44294109)
chr7 (328-420)||(44293982-44294075)
chr7 (328-427)||(4048423-4048523)
chr7 (385-480)||(30662188-30662284)
chr7 (422-511)||(42312759-42312850)
chr7 (395-524)||(11975659-11975791)
chr7 (328-393)||(27280879-27280944)
chr7 (328-455)||(29710530-29710659)
chr7 (328-393)||(30662157-30662222)
chr7 (328-393)||(31453052-31453117)
chr7 (328-392)||(4048205-4048269)
chr7 (328-450)||(6694534-6694657)
chr7 (330-432)||(11975653-11975757)
chr7 (395-511)||(27280827-27280946)
chr7 (408-511)||(30869631-30869737)
chr7 (445-508)||(40951853-40951918)
chr7 (477-511)||(41666204-41666238)
chr7 (328-393)||(42313061-42313127)
chr7 (352-389)||(3198219-3198256)
chr7 (328-393)||(42312761-42312826)
chr7 (328-392)||(40951854-40951918)
chr7 (334-421)||(42313007-42313095)
[»] chr1 (30 HSPs)
chr1 (328-450)||(26879611-26879735)
chr1 (328-420)||(7489933-7490026)
chr1 (409-511)||(40892532-40892636)
chr1 (383-450)||(1173075-1173142)
chr1 (343-508)||(7489902-7490071)
chr1 (330-392)||(52913034-52913096)
chr1 (328-393)||(18608640-18608705)
chr1 (328-450)||(18608789-18608913)
chr1 (407-510)||(6314295-6314397)
chr1 (408-511)||(26879632-26879738)
chr1 (383-511)||(33650398-33650531)
chr1 (383-479)||(52913173-52913272)
chr1 (364-450)||(6314297-6314382)
chr1 (424-511)||(7489959-7490048)
chr1 (328-420)||(52913173-52913267)
chr1 (453-513)||(18204930-18204991)
chr1 (445-511)||(18608638-18608706)
chr1 (328-393)||(26879671-26879736)
chr1 (328-393)||(33650671-33650736)
chr1 (328-393)||(34173320-34173385)
chr1 (328-393)||(40892569-40892634)
chr1 (408-508)||(18608810-18608913)
chr1 (448-511)||(40892512-40892576)
chr1 (403-514)||(50727597-50727712)
chr1 (395-509)||(18204931-18205045)
chr1 (328-393)||(2633366-2633431)
chr1 (328-393)||(33650400-33650465)
chr1 (328-450)||(33650401-33650526)
chr1 (395-511)||(33650619-33650738)
chr1 (328-420)||(52913065-52913160)
[»] chr4 (59 HSPs)
chr4 (328-420)||(41083088-41083181)
chr4 (328-450)||(45038386-45038510)
chr4 (445-508)||(2787950-2788013)
chr4 (383-524)||(41083041-41083186)
chr4 (383-479)||(53863351-53863449)
chr4 (383-511)||(41083259-41083391)
chr4 (383-513)||(45038381-45038515)
chr4 (385-509)||(2788102-2788229)
chr4 (348-511)||(7245992-7246159)
chr4 (337-440)||(12592193-12592297)
chr4 (383-513)||(7246229-7246363)
chr4 (328-420)||(53863528-53863622)
chr4 (387-480)||(44057273-44057367)
chr4 (328-393)||(7245994-7246059)
chr4 (328-420)||(7246026-7246119)
chr4 (328-420)||(12498830-12498923)
chr4 (328-393)||(12498890-12498955)
chr4 (328-393)||(17231990-17232055)
chr4 (328-450)||(41083264-41083388)
chr4 (383-477)||(2787923-2788017)
chr4 (427-511)||(12498871-12498957)
chr4 (422-511)||(11884615-11884707)
chr4 (349-418)||(46196349-46196419)
chr4 (390-511)||(2470121-2470245)
chr4 (328-393)||(9999291-9999356)
chr4 (328-420)||(40146986-40147078)
chr4 (328-455)||(40147172-40147301)
chr4 (458-511)||(50290183-50290236)
chr4 (328-420)||(53863351-53863444)
chr4 (328-440)||(12498632-12498747)
chr4 (328-450)||(12592400-12592524)
chr4 (422-511)||(21322016-21322107)
chr4 (445-509)||(24684257-24684321)
chr4 (334-443)||(2470124-2470235)
chr4 (396-511)||(9999289-9999407)
chr4 (367-421)||(11884649-11884704)
chr4 (395-511)||(24684266-24684382)
chr4 (328-393)||(11884617-11884683)
chr4 (445-508)||(12498683-12498748)
chr4 (328-386)||(40395309-40395367)
chr4 (343-393)||(41083339-41083389)
chr4 (422-505)||(45038252-45038337)
chr4 (328-382)||(51950543-51950597)
chr4 (328-393)||(2469901-2469966)
chr4 (328-393)||(2788164-2788229)
chr4 (328-393)||(7246294-7246359)
chr4 (396-480)||(12498653-12498738)
chr4 (328-393)||(21322040-21322105)
chr4 (328-393)||(24369274-24369339)
chr4 (445-511)||(26782502-26782570)
chr4 (445-511)||(40395159-40395227)
chr4 (328-393)||(40395161-40395226)
chr4 (328-393)||(41083056-41083121)
chr4 (328-420)||(9999500-9999591)
chr4 (328-392)||(25055884-25055948)
chr4 (373-455)||(25056151-25056235)
chr4 (435-508)||(25056155-25056230)
chr4 (384-511)||(45787023-45787154)
chr4 (435-508)||(50290397-50290472)
[»] scaffold0279 (2 HSPs)
scaffold0279 (328-455)||(1145-1274)
scaffold0279 (383-511)||(1140-1272)
[»] scaffold0018 (6 HSPs)
scaffold0018 (383-511)||(161404-161536)
scaffold0018 (328-393)||(161675-161740)
scaffold0018 (328-450)||(161407-161531)
scaffold0018 (328-393)||(161406-161471)
scaffold0018 (328-420)||(161615-161708)
scaffold0018 (383-511)||(161610-161742)
[»] scaffold0157 (6 HSPs)
scaffold0157 (328-393)||(21522-21587)
scaffold0157 (328-420)||(21554-21647)
scaffold0157 (427-511)||(21520-21606)
scaffold0157 (328-440)||(21730-21845)
scaffold0157 (445-508)||(21729-21794)
scaffold0157 (396-480)||(21739-21824)
[»] scaffold0578 (2 HSPs)
scaffold0578 (425-509)||(2430-2517)
scaffold0578 (364-450)||(2427-2516)


Alignment Details
Target: chr5 (Bit Score: 471; Significance: 0; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 1 - 527
Target Start/End: Original strand, 1649014 - 1649540
Alignment:
Q  1 tgatgttaacacaggaagggctattggtggtggagggttgcctcctattggagttattattggacttgtggctggtttaggtgctgctggagctttgctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1649014 tgatgttaacacaggaagggctattggtggtggagggttgcctcctattggagttattattggacttgtggctggtttaggtgctgctggagctttgctt 1649113  T
Q  101 gtttttggtcttcagtgatattttatactagtatcattatacattagttttattaattttcatgactccaaagatatgtccaatcttggagtttgtatct 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1649114 gtttttggtcttcagtgatattttatactagtatcattatacattagttttattgattttcatgactccaaagatatgtccaatcttggagtttgtatct 1649213  T
Q  201 cagaaactcctttattgtatgtgcaaattgaaggcttatgtatgagattgtacattttctacaaaatgaattgagactttcttaaaaactgtatgcgaag 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  1649214 cagaaactcctttattgtatgtgcaaattgaaggcttatgtatgagattgaacatttgctacaaaatgaattgagactttcttaaaaactgtatgcgatg 1649313  T
Q  301 atttgatagtgaaatgtttaggctaaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||    
T  1649314 atttgatagtgaaatgtttaggctaaattaaaggacttatgagtgatcaaaataacttaatggatcaatctgttacaaacctcaaacttaaagacttatg 1649413  T
Q  401 tctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaacctta 500  Q
    |||||| |||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1649414 tctgaccaaaatagcttaaaaaccaatatgttataaacctcaagctttaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaacctta 1649513  T
Q  501 aacttaaaggatccttagtataatcta 527  Q
    ||||||||||||| ||||| |||||||    
T  1649514 aacttaaaggatctttagtgtaatcta 1649540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 390 - 511
Target Start/End: Complemental strand, 25456399 - 25456276
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa-aatcaatat 487  Q
    |||| ||||| | |||| |||||||||||||  |||||||||||| |||||| || |||||| ||||| |||||||||||||||||||||  | ||||||    
T  25456399 aaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaggaccaatat 25456300  T
Q  488 gttacaaaccttaaacttaaagga 511  Q
    ||||||||||| ||||||||||||    
T  25456299 gttacaaacctaaaacttaaagga 25456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 343 - 450
Target Start/End: Original strand, 25456500 - 25456608
Alignment:
Q  343 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtctt-atgtctgactaaaataacttaaaaaccaatctgttataaacctt 441  Q
    |||| ||||||||||||| |||  ||||| |||||||| ||||||||||||| || |||| |||||||||||||||||| |||||||||||| ||||||     
T  25456500 gtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagtatttatgtgtgactaaaataacttaaagaccaatctgttacaaacctc 25456599  T
Q  442 aagcttaaa 450  Q
    || ||||||    
T  25456600 aaacttaaa 25456608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 395 - 514
Target Start/End: Original strand, 35813517 - 35813638
Alignment:
Q  395 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttac 492  Q
    ||||||| |||  |||||||||||||||| ||||||||| |||||| |  |||||| ||||| ||||| | |||||||||||||  ||  ||| ||||||    
T  35813517 cttatgtatgagcaaaataacttaaaaacaaatctgttacaaacctcacacttaaaggacttatgtgtaaccaaaataacttaaataactaatctgttac 35813616  T
Q  493 aaaccttaaacttaaaggatcc 514  Q
    |||||||||||||||| |||||    
T  35813617 aaaccttaaacttaaatgatcc 35813638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 35461563 - 35461470
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactta-aagtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||  ||||||||||||| |||| |||  |||||||||||||||||||||||| | | ||||||| |||| |||||||||||||    
T  35461563 ttaaaggacttatttgtgatcaaaataatttaaaggaccaatctgttacaaacttcaaacttacaggacttatgtgtgaccaaaataacttaaa 35461470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 17400793 - 17400884
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||||||| ||| || || |||||| ||||| ||||||||||||||||||||||  | |||||||||||||| || ||||||||||||    
T  17400793 accaatctgttacaaaactcaaacttaaaggacttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaagga 17400884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 508
Target Start/End: Original strand, 4943118 - 4943235
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtt 490  Q
    ||||||| |||| ||||||||||||||  | ||||||||||||||  | || |||||| ||||| |||||||||||||||| |||||  | |||||||||    
T  4943118 cttatgtgtgaccaaaataacttaaaaggatcaatctgttataaatttcaaacttaaaggacttatgtgtgatcaaaataatttaaagtaccaatatgtt 4943217  T
Q  491 acaaaccttaaacttaaa 508  Q
    ||||| || |||||||||    
T  4943218 acaaatctcaaacttaaa 4943235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 25456402 - 25456279
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaa 426  Q
    ||||| |||||||  |||| ||||||||||||| |||  |||||||||||||| ||||||||||| | ||||||| |||  ||||||||||||  |||||    
T  25456402 ttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaggaccaa 25456303  T
Q  427 tctgttataaaccttaagcttaaa 450  Q
    | ||||| |||||| || ||||||    
T  25456302 tatgttacaaacctaaaacttaaa 25456279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 472
Target Start/End: Original strand, 28559454 - 28559532
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaata 472  Q
    ||||||| |||||||||||| |||||  ||||||||||||||||||| || |||||| ||||||||||||| |||||||    
T  28559454 cttatgtgtgactaaaataatttaaaggaccaatctgttataaacctcaaacttaaaggacttgtgtgtgaccaaaata 28559532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 16327225 - 16327132
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| || | |||||||||||||  ||  |||||||||||||| ||||||||||| | |||||||  |||||||||||||||||    
T  16327225 ttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaacttaaaggacttatgtgcgactaaaataacttaaa 16327132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 514
Target Start/End: Original strand, 4943112 - 4943302
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaat-ggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaa 426  Q
    |||| ||||||| |||| |||||||||||||  |||| ||||||||| ||| |||||||||||| | ||||||| |||  ||||||| |||||  |||||    
T  4943112 aaagaacttatgtgtgaccaaaataacttaaaaggatcaatctgttataaatttcaaacttaaaggacttatgtgtgatcaaaataatttaaagtaccaa 4943211  T
Q  427 tctgttataaaccttaagcttaaatg-acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatcc 514  Q
    | ||||| ||| || || |||||| | |||| ||||||| ||||||||||||||  | |||| | | |||||||| ||| |||||||||||    
T  4943212 tatgttacaaatctcaaacttaaaagaacttatgtgtgaccaaaataacttaaatgaccaatctatcacaaacctcaaatttaaaggatcc 4943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 524
Target Start/End: Original strand, 37032931 - 37033046
Alignment:
Q  409 aaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaa 508  Q
    ||||||||||||||||||| |||||||||  | || ||| || ||||| ||||||| |||||||||||||||  ||| ||| | ||| || |||||||||    
T  37032931 aaataacttaaaaaccaatatgttataaatatcaaacttgaaggacttatgtgtgaccaaaataacttaaaactaatctgtcataaatctcaaacttaaa 37033030  T
Q  509 ggatccttagtataat 524  Q
     |||||  ||||||||    
T  37033031 agatcccaagtataat 37033046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 403 - 477
Target Start/End: Complemental strand, 10827217 - 10827143
Alignment:
Q  403 tgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactta 477  Q
    |||| ||||||||||||| |||||||||||| ||| || || |||||| ||||| ||||||| ||||||||||||    
T  10827217 tgaccaaaataacttaaagaccaatctgttacaaaactcaaacttaaaagacttatgtgtgaccaaaataactta 10827143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 16327309 - 16327400
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| ||||||||||| | ||||||  || |||||||||||||||    
T  16327309 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaaggacttatg--tgtctaaaataacttaaa 16327400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 420
Target Start/End: Complemental strand, 32361288 - 32361202
Alignment:
Q  335 acttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||  ||| ||||||||||||| ||| |||| ||||||||||||||||||||||   ||||||| |||| |||||||||||||    
T  32361288 acttatgtatgaccaaaataacttaagggactaatttgttacaaacttcaaacttaaataacttatgtgtgaccaaaataacttaaa 32361202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 466 - 511
Target Start/End: Original strand, 6588102 - 6588147
Alignment:
Q  466 caaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||    
T  6588102 caaaataacttaaaatcaatatgttacaaacctcaaatttaaagga 6588147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 16327230 - 16327098
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| | || |||||||||||||  |||||||||||| |||||| || |||||| ||||| |||| ||  |||||||||||||     
T  16327230 caaacttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaacttaaaggacttatgtgcgactaaaataacttaaac 16327131  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     |||||| | ||||||||||  |||||||||||    
T  16327130 gatcaatctattacaaacctctaacttaaagga 16327098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 17400671 - 17400579
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| | |||||||| ||||||| |||  ||| ||||||||| ||||||||| |||| ||||||| |||| |||||||||||||    
T  17400671 ttaaaggacttatgtgagatcaaaagaacttaaaggaccaatttgttacaaatttcaaacttaaaagacttatgtgtgac-aaaataacttaaa 17400579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 40980778 - 40980713
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||| ||||||| ||||||||||||||||||  ||| ||||| |||||||| ||||||||||||    
T  40980778 ttaaagtacttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaag 40980713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 450
Target Start/End: Complemental strand, 1996265 - 1996145
Alignment:
Q  332 aggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatct 429  Q
    |||||||||| |||| ||||||||||||| ||| |||||| ||||||||  |||||||||| |  |||| | |||| |||||||||||||| | ||||||    
T  1996265 aggacttatgtgtgaccaaaataacttaaaggactaatctattacaaaccccaaacttaaaggatttatatgtgaccaaaataacttaaaatatcaatct 1996166  T
Q  430 gttataaaccttaagcttaaa 450  Q
    |||| ||| || || ||||||    
T  1996165 gttacaaatctcaaacttaaa 1996145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 28559362 - 28559302
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaact 388  Q
    |||||||||||||| |||| ||||||||||||| |||  |||||||||||||| |||||||    
T  28559362 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaact 28559302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 35461527 - 35461436
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||||||| |||| | || |||| | ||||| ||||||| ||||||||||||||  | |||||| |||||||||| ||||||||||||    
T  35461527 accaatctgttacaaacttcaaacttacaggacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaacttaaagga 35461436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 511
Target Start/End: Original strand, 35461662 - 35461773
Alignment:
Q  403 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacctt 499  Q
    |||| |||||||||||||  | |||||||||| ||| || ||  ||||||||||| ||||||| ||||||||||||||  | |||| | ||||||||||     
T  35461662 tgacaaaaataacttaaatgatcaatctgttacaaatctcaaaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctc 35461761  T
Q  500 aaacttaaagga 511  Q
    ||||||||||||    
T  35461762 aaacttaaagga 35461773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 35461703 - 35461771
Alignment:
Q  325 aaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||| |||||||| |||| ||||||||||||| |||  ||||| |||||||| ||||||||||||    
T  35461703 aaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaag 35461771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 453
Target Start/End: Original strand, 35813547 - 35813635
Alignment:
Q  367 aatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatga 453  Q
    |||||||||||||| ||| ||||||| | ||||||| | || ||||||||||||| ||| ||||||||| ||||||||| |||||||||    
T  35813547 aatctgttacaaacctcacacttaaaggacttatgtgtaaccaaaataacttaaataactaatctgttacaaaccttaaacttaaatga 35813635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 38680700 - 38680632
Alignment:
Q  325 aaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||| || ||||| |||| ||||||||||||| || | ||||| |||||||||||||||||||||    
T  38680700 aaattaaaagatttatgtgtgaccaaaataacttaaagggtcaatctattacaaacttcaaacttaaag 38680632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 479
Target Start/End: Complemental strand, 5746227 - 5746129
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 479  Q
    |||||||||||  ||||||| | || |||||||||||||  ||||||||||||||||||| ||  |||||  |||| ||||||| ||||||||||||||    
T  5746227 caaacttaaaggacttatgttttaccaaaataacttaaatgaccaatctgttataaacctcaaatttaaagaacttatgtgtgaccaaaataacttaaa 5746129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 23662005 - 23661939
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||||| |||||||||||||||||||| ||| |||||  | ||||||||||||    
T  23662005 cttaaaagacttatgtgtgaccaaaataacttaaaatcaatctgtcacaaatatcaaacttaaagga 23661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 23796565 - 23796631
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||||| |||||||||||||||||||| ||| |||||  | ||||||||||||    
T  23796565 cttaaaagacttatgtgtgaccaaaataacttaaaatcaatctgtcacaaatatcaaacttaaagga 23796631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 17400817 - 17400882
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||||||||||||||||  ||  ||| |||||||||  ||||||||||||    
T  17400817 ttaaaggacttatgtgtgatcaaaataacttaaatgaccaatatgttacaaatctcaaacttaaag 17400882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 23661946 - 23661881
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| || | |||||||||||||  ||| |||||||||||||| ||||| ||||||    
T  23661946 ttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 23796624 - 23796689
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| || | |||||||||||||  ||| |||||||||||||| ||||| ||||||    
T  23796624 ttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgttacaaacgtcaaatttaaag 23796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 28559367 - 28559235
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||| |||||||||||||  |||||||||||| |||||| || || || |||||| || || |  |||||||||||||     
T  28559367 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaactgaattgacttatgcgtaacaaaaataacttaaag 28559268  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||| | ||||||||||||    
T  28559267 gaccaatctgttacaaacgtcaaacttaaagga 28559235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 36759730 - 36759665
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||| ||||| |||||||| |||| | | | ||||||||||||| ||||||||||||    
T  36759730 ttaaaggacttataagtgaccaaaataatttaaagaacttatctgttacaaacatcaaacttaaag 36759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 511
Target Start/End: Complemental strand, 40980771 - 40980711
Alignment:
Q  453 acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||| ||||||||||||||||||||||  |||||| | |||||||||| ||||||||||||    
T  40980771 acttatgtgtgatcaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 40980711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 1996261 - 1996142
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat--caatatgtta 491  Q
    ||||||| |||| |||||||||||||  || ||||| ||| |||||  || |||||| || || | ||||| ||||||||||||||||  |||| |||||    
T  1996261 cttatgtgtgaccaaaataacttaaaggactaatctattacaaaccccaaacttaaaggatttatatgtgaccaaaataacttaaaatatcaatctgtta 1996162  T
Q  492 caaaccttaaacttaaagga 511  Q
    |||| || ||||||||||||    
T  1996161 caaatctcaaacttaaagga 1996142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 2377327 - 2377379
Alignment:
Q  340 tgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||| |||||||||||| | | |||||| ||||||||||||||||||||    
T  2377327 tgagtgataaaaataacttaaagaactaatcttttacaaacttcaaacttaaa 2377379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 20928086 - 20928150
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||||||||| |||| ||||||||||||| |||  ||||||||| |||| ||||| |||||    
T  20928086 ttaaaggacttatgtgtgaccaaaataacttaaaggacaaatctgttataaacctcaaagttaaa 20928150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 509
Target Start/End: Original strand, 25456501 - 25456609
Alignment:
Q  403 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-atcaatatgttacaaacctta 500  Q
    |||| |||||||||||||  |||||||| ||| |||||| || ||||||  | || |||||||  ||||||||||||| | |||| |||||||||||| |    
T  25456501 tgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagtatttatgtgtgactaaaataacttaaagaccaatctgttacaaacctca 25456600  T
Q  501 aacttaaag 509  Q
    |||||||||    
T  25456601 aacttaaag 25456609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 37643064 - 37643096
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaa 360  Q
    |||||||||||||||||||||||||||||||||    
T  37643064 ttaaaggacttatgagtgatcaaaataacttaa 37643096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 4943171 - 4943265
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| ||||||||||||| |||| | |  ||| |||||||||  |||||||||||    ||||||| |||| |||||||||||||    
T  4943171 ttaaaggacttatgtgtgatcaaaataatttaaagtaccaatatgttacaaatctcaaacttaaaagaacttatgtgtgaccaaaataacttaaa 4943265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 417
Target Start/End: Complemental strand, 14604193 - 14604102
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatg-gattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactt 417  Q
    |||||||||||||  |||| ||||||||| |||   ||| |||||||||||||| ||||||||||| | ||||||| |||| ||||||||||    
T  14604193 ttaaaggacttatatgtgaccaaaataacataaaatgatcaatctgttacaaacctcaaacttaaaggacttatgtgtgaccaaaataactt 14604102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 450
Target Start/End: Original strand, 35461667 - 35461770
Alignment:
Q  349 aaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagct 446  Q
    ||||||||||||  ||| |||||||||||||  ||||| ||||| | ||||||| |||| |||||||||||||  |||||||| ||| |||||| || ||    
T  35461667 aaaataacttaaatgatcaatctgttacaaatctcaaaattaaatgacttatgtgtgaccaaaataacttaaaggaccaatctattacaaacctcaaact 35461766  T
Q  447 taaa 450  Q
    ||||    
T  35461767 taaa 35461770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 35813508 - 35813575
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaatc-aatatgttacaaaccttaaacttaaagga 511  Q
    |||||||||||| ||| ||| ||||||||||||||| | ||| |||||||||||| | ||||||||||    
T  35813508 cttaaatgacttatgtatgagcaaaataacttaaaaacaaatctgttacaaacctcacacttaaagga 35813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 454
Target Start/End: Original strand, 10827315 - 10827444
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa-aacc 424  Q
    ||||||||||| |  |||| |||||||| |||| |||| |||||||||||||  |||||||||||  | ||||||  |||| |||| ||||||||  |||    
T  10827315 ttaaaggacttgtttgtgaccaaaataatttaaaggatcaatctgttacaaaactcaaacttaaaaggacttatgagtgaccaaaacaacttaaaggacc 10827414  T
Q  425 aatctgttataaaccttaagcttaaatgac 454  Q
    ||| | ||| |||||| || ||||||||||    
T  10827415 aatttattacaaacctcaaacttaaatgac 10827444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 16327304 - 16327434
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || |||||| ||||| |||||    |||||||||||||     
T  16327304 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaaggacttatgtgtct--aaaataacttaaat 16327401  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     || ||| | |||||||||| ||||||||||||    
T  16327402 gattaatctattacaaacctcaaacttaaagga 16327434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 509
Target Start/End: Complemental strand, 23662001 - 23661881
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatat 487  Q
    |||| ||||||| |||| |||||||||||||| | ||||||| | |||  | || |||||| ||||| ||||| | ||||||||||||||  |||||| |    
T  23662001 aaagacttatgtgtgaccaaaataacttaaaatc-aatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatct 23661903  T
Q  488 gttacaaaccttaaacttaaag 509  Q
    ||||||||| | ||| ||||||    
T  23661902 gttacaaacgtcaaatttaaag 23661881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 390 - 509
Target Start/End: Original strand, 23796569 - 23796689
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatat 487  Q
    |||| ||||||| |||| |||||||||||||| | ||||||| | |||  | || |||||| ||||| ||||| | ||||||||||||||  |||||| |    
T  23796569 aaagacttatgtgtgaccaaaataacttaaaatc-aatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatct 23796667  T
Q  488 gttacaaaccttaaacttaaag 509  Q
    ||||||||| | ||| ||||||    
T  23796668 gttacaaacgtcaaatttaaag 23796689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 32361228 - 32361170
Alignment:
Q  335 acttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||| |||| |||||||||||||  ||| ||||| |||||||||||||| ||||||    
T  32361228 acttatgtgtgaccaaaataacttaaatgatcaatctattacaaacttcaaatttaaag 32361170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 1996371 - 1996428
Alignment:
Q  336 cttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||| |||||||| |||| |||  ||||| |||||||| ||||||||||||    
T  1996371 cttatgagtgaccaaaataatttaaaggaacaatctcttacaaacctcaaacttaaag 1996428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 5746222 - 5746129
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa 420  Q
    ||||||||||||||  | | |||||||||||||  ||  ||||||||| |||| ||||| ||||||  ||||||| |||| |||||||||||||    
T  5746222 ttaaaggacttatgttttaccaaaataacttaaatgaccaatctgttataaacctcaaatttaaagaacttatgtgtgaccaaaataacttaaa 5746129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 14604154 - 14604072
Alignment:
Q  424 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaa 508  Q
    |||||||||| |||||| || |||||| ||||| ||||||| |||||||||||   |||||| | |||||||||| ||| |||||    
T  14604154 caatctgttacaaacctcaaacttaaaggacttatgtgtgaccaaaataactt--gatcaatctattacaaacctcaaatttaaa 14604072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 19550166 - 19550101
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| || | ||||||||||||| | || ||||| |||||||| ||||||||||||    
T  19550166 ttaaaagacttatgtgtcaccaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 19550101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 23662004 - 23661894
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 425  Q
    ||||| |||||||| |||| |||||||||||||   || ||||||| |||||  ||||||||||| | ||||||| | || |||||||||||||| | ||    
T  23662004 ttaaaagacttatgtgtgaccaaaataacttaa--aatcaatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatca 23661907  T
Q  426 atctgttataaac 438  Q
    |||||||| ||||    
T  23661906 atctgttacaaac 23661894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 23796566 - 23796676
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 425  Q
    ||||| |||||||| |||| |||||||||||||   || ||||||| |||||  ||||||||||| | ||||||| | || |||||||||||||| | ||    
T  23796566 ttaaaagacttatgtgtgaccaaaataacttaa--aatcaatctgtcacaaatatcaaacttaaaggacttatgtgtaaccaaaataacttaaaagatca 23796663  T
Q  426 atctgttataaac 438  Q
    |||||||| ||||    
T  23796664 atctgttacaaac 23796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 25456403 - 25456335
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| | ||||| ||||||||||||||  | |||| |||||||||||| ||||||||||||    
T  25456403 cttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 25456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 28559446 - 28559511
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||  ||||||| |||| |||  ||||||||| |||| ||||||||||||    
T  28559446 ttaaaggacttatgtgtgactaaaataatttaaaggaccaatctgttataaacctcaaacttaaag 28559511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 33491639 - 33491574
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||  |||||||||||||||||| ||| ||||   |||||||| | ||||||||||    
T  33491639 ttaaaggacttatctgtgatcaaaataacttaaaggactaattgattacaaaccttaaacttaaag 33491574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 35461499 - 35461438
Alignment:
Q  332 aggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||| |||| ||||||||||||| |||  ||| | |||||||| ||||||||||||    
T  35461499 aggacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaacttaaag 35461438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 514
Target Start/End: Original strand, 36760814 - 36760878
Alignment:
Q  452 gacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatcc 514  Q
    ||||| ||||||| | ||||||||||||  ||| || |||||||||||| |||||||||||||||    
T  36760814 gacttatgtgtgaccgaaataacttaaattatctatctgttacaaacctcaaacttaaaggatcc 36760878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 508
Target Start/End: Complemental strand, 12712480 - 12712424
Alignment:
Q  453 acttgtgtgtgatcaaaataactt-aaaatcaatatgttacaaaccttaaacttaaa 508  Q
    |||| ||||||||||||||||||| ||||||||| | |||||||| | |||||||||    
T  12712480 acttatgtgtgatcaaaataacttaaaaatcaatctattacaaacatcaaacttaaa 12712424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 12713106 - 12713190
Alignment:
Q  337 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||| |||||||||||||  ||| ||| ||||| |||  ||||||||||| | ||||||| |||| |||||||||||||    
T  12713106 ttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaaacttaaaggacttatgtgtgacaaaaataacttaaa 12713190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 508
Target Start/End: Complemental strand, 12773744 - 12773688
Alignment:
Q  453 acttgtgtgtgatcaaaataactt-aaaatcaatatgttacaaaccttaaacttaaa 508  Q
    |||| ||||||||||||||||||| ||||||||| | |||||||| | |||||||||    
T  12773744 acttatgtgtgatcaaaataacttaaaaatcaatctattacaaacatcaaacttaaa 12773688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 420
Target Start/End: Original strand, 12774370 - 12774454
Alignment:
Q  337 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||| |||||||||||||  ||| ||| ||||| |||  ||||||||||| | ||||||| |||| |||||||||||||    
T  12774370 ttatgcgtgaccaaaataacttaaaagatcaatatgttagaaatctcaaacttaaaggacttatgtgtgacaaaaataacttaaa 12774454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 16327388 - 16327432
Alignment:
Q  349 aaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||  ||||||||| |||||||| ||||||||||||    
T  16327388 aaaataacttaaatgattaatctattacaaacctcaaacttaaag 16327432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 510
Target Start/End: Original strand, 23662109 - 23662215
Alignment:
Q  408 aaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaac 503  Q
    ||||||||||||||  |||||| ||||| ||| || || ||||||  |||| ||||| | ||||||||||||||  | |||| | |||||||||| ||||    
T  23662109 aaaataacttaaaagaaccaatttgttacaaatctcaaacttaaagaacttatgtgtaaccaaaataacttaaaggaccaatttattacaaacctcaaac 23662208  T
Q  504 ttaaagg 510  Q
    |||||||    
T  23662209 ttaaagg 23662215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 28559281 - 28559237
Alignment:
Q  349 aaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||| |||  |||||||||||||| ||||||||||||    
T  28559281 aaaataacttaaaggaccaatctgttacaaacgtcaaacttaaag 28559237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 32361287 - 32361168
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    ||||||| |||| ||||||||||||   || ||| ||||| |||| | || ||||||| |||| ||||||| ||||||||||||||  |||||| | |||    
T  32361287 cttatgtatgaccaaaataacttaagggactaatttgttacaaacttcaaacttaaataacttatgtgtgaccaaaataacttaaatgatcaatctatta 32361188  T
Q  492 caaaccttaaacttaaagga 511  Q
    ||||| | ||| ||||||||    
T  32361187 caaacttcaaatttaaagga 32361168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 35813568 - 35813632
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||||||||| || | |||||||||||||   | ||||||||||||||| | |||||||||    
T  35813568 ttaaaggacttatgtgtaaccaaaataacttaaataactaatctgttacaaaccttaaacttaaa 35813632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 36217162 - 36217278
Alignment:
Q  395 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaa 494  Q
    ||||||| |||| ||||||| ||||| | |||||||||| |||||| || |||||| ||||| ||||||| |||||||||||||||||||| ||||||||    
T  36217162 cttatgtgtgaccaaaataatttaaagatcaatctgttacaaacctcaaacttaaaagacttatgtgtgaccaaaataacttaaaatcaatttgttacaa 36217261  T
Q  495 accttaaacttaaagga 511  Q
    |||| ||||||||||||    
T  36217262 acctcaaacttaaagga 36217278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 31630192 - 31630070
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaaaccaat 427  Q
    ||||| |||||||| |||| ||||||||||||| |||| |||||||||||||| |||||||||||| |||| || |||| ||||||| ||| |||| |||    
T  31630192 ttaaaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaagacttaggtgtgaccaaaataatttataaacaaat 31630093  T
Q  428 ctgttataaaccttaagcttaaa 450  Q
    || ||| |||||| || ||||||    
T  31630092 ctattacaaacctcaaacttaaa 31630070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 25895134 - 25895253
Alignment:
Q  395 cttatgtctgactaaaataacttaaaaac-caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    ||||||| ||||||||||||||||||    |||||||||| ||||||||| |||||| ||||| ||||||| ||||||||||||||  | |||| |||||    
T  25895134 cttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaacttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgtta 25895233  T
Q  492 caaaccttaaacttaaagga 511  Q
    ||||||| ||||||||||||    
T  25895234 caaacctcaaacttaaagga 25895253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 31630281 - 31630409
Alignment:
Q  383 caaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--a 480  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||| |||  ||||| ||  ||||| ||||| ||||||| ||||||||||||||  |    
T  31630281 caaacttaaagacttatgtgtgaccaaaataacttaaaaaccaatctattactaacctcaaatttaaaggacttttgtgtgaccaaaataacttaaatga 31630380  T
Q  481 tcaatatgttacaaaccttaaacttaaag 509  Q
    ||||| |  || |||||| ||||||||||    
T  31630381 tcaatcttctataaacctcaaacttaaag 31630409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 44556652 - 44556528
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| ||||||||||||| |||| |||| ||| | |||||||| ||||||||||| | ||||||| |||| |||| ||||||||  ||||    
T  44556652 ttaaaggacttatgtgtgatcaaaataagttaaaggatcaatttattacaaacctcaaacttaaaggacttatgtgtgacaaaaaaaacttaaatgacca 44556553  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||| ||| ||||||||| ||||||    
T  44556552 atctattacaaaccttaaacttaaa 44556528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 455
Target Start/End: Original strand, 25895128 - 25895255
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaat 427  Q
    |||||||||||| ||||  |||||||||||| || | |||||||||||||| | ||||||||| | ||| ||| |||| |||||||||||||  ||||||    
T  25895128 aaaggacttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaacttaaaggacttttgtgtgaccaaaataacttaaaggaccaat 25895227  T
Q  428 ctgttataaaccttaagcttaaatgact 455  Q
    |||||| |||||| || |||||| ||||    
T  25895228 ctgttacaaacctcaaacttaaaggact 25895255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 9501037 - 9500905
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||||||||||||||||| || | |||||||| |||||| || |||||  |||||  |||||| ||||||||||||||     
T  9501037 caaacttaaaggacttatgtgtgactaaaataacttaaagaagcgatctgttacaaacctcaaacttaagggacttaagtgtgaccaaaataacttaaag 9500938  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| ||||||| |||| ||||||||||||    
T  9500937 gaccaatctgttacagacctaaaacttaaagga 9500905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 5009379 - 5009509
Alignment:
Q  383 caaacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat 481  Q
    |||||||||||  |||||| |||| |||||||||||||  | |||| ||||| |||||| || ||||||  |||| ||||||| ||||| |||||||||     
T  5009379 caaacttaaaggattatgtgtgacaaaaataacttaaaggatcaatatgttacaaacctcaaacttaaagtacttatgtgtga-caaaaaaacttaaaag 5009477  T
Q  482 --caatatgttacaaaccttaaacttaaagga 511  Q
      ||||||||||||||||| ||||||||||||    
T  5009478 accaatatgttacaaacctcaaacttaaagga 5009509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 5009384 - 5009506
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaa-acca 425  Q
    |||||||| ||||| ||||  |||||||||||| |||| ||| |||||||||| ||||||||||||| ||||||| |||| |||| ||||||||| ||||    
T  5009384 ttaaagga-ttatgtgtgacaaaaataacttaaaggatcaatatgttacaaacctcaaacttaaagtacttatgtgtgac-aaaaaaacttaaaagacca 5009481  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    || ||||| |||||| || ||||||    
T  5009482 atatgttacaaacctcaaacttaaa 5009506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 456
Target Start/End: Original strand, 36217155 - 36217281
Alignment:
Q  329 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaaaaccaat 427  Q
    |||| |||||||| |||| |||||||| |||| | || |||||||||||||| |||||||| |||| ||||||| |||| |||||||||| |||| ||||    
T  36217155 taaatgacttatgtgtgaccaaaataatttaaag-atcaatctgttacaaacctcaaacttaaaagacttatgtgtgaccaaaataactt-aaaatcaat 36217252  T
Q  428 ctgttataaaccttaagcttaaatgactt 456  Q
     ||||| |||||| || |||||| |||||    
T  36217253 ttgttacaaacctcaaacttaaaggactt 36217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 445 - 524
Target Start/End: Original strand, 43699448 - 43699529
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatccttagtataat 524  Q
    |||||| ||||| ||||||| |||||||| |||||  ||||||||||||||||||| |||||||||||| || | |||||||    
T  43699448 cttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaaggacccattgtataat 43699529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 4188689 - 4188624
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||| || |||| ||||||||||||||||| | || |||||||||||||||| ||||||    
T  4188689 ttaaaggacttgtgtgtgaccaaaataacttaatggagttatttgttacaaacttcaaagttaaag 4188624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 25895186 - 25895251
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||| || |||| ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  25895186 ttaaaggacttttgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaag 25895251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 33847703 - 33847768
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  33847703 ttaaaggacttatgtgtgaccaaaataacttaaaggaacaatatgttacaaacatcaaacttaaag 33847768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 450
Target Start/End: Complemental strand, 5009289 - 5009161
Alignment:
Q  329 taaaggacttatgagtgatcaaaataacttaatgga----ttaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-- 421  Q
    |||| |||||||| ||||||||||||||||||  ||    ||||||||||||||||  |||||||||| | ||||||| |||  ||||||||||||||      
T  5009289 taaaagacttatgtgtgatcaaaataacttaaatgacaaattaatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaagg 5009190  T
Q  422 accaatctgttataaaccttaagcttaaa 450  Q
    |||||||| ||| |||||| || ||||||    
T  5009189 accaatctattacaaacctcaaacttaaa 5009161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 509
Target Start/End: Complemental strand, 12612514 - 12612448
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaag 509  Q
    |||||||||||| |||||||||||||||| |||||  | |||| | |||||||||||||||||||||    
T  12612514 cttaaatgacttatgtgtgatcaaaataatttaaaagaccaatctattacaaaccttaaacttaaag 12612448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 445 - 509
Target Start/End: Complemental strand, 31630193 - 31630127
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaag 509  Q
    |||||| ||||| ||||||| ||||||||||||||  |||||| |||||||||||| ||||||||||    
T  31630193 cttaaaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaag 31630127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 1316162 - 1316069
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| | |||||||||||||||| | |   || |||||||||| |||||| |||| | ||||||| |||| |||||||||||||    
T  1316162 ttaaaggacttatgtgcgatcaaaataacttaaagaacatatatgttacaaacctcaaacataaaggacttatgtgtgaccaaaataacttaaa 1316069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 348 - 393
Target Start/End: Original strand, 4511638 - 4511683
Alignment:
Q  348 caaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||| | || |||||||||||||||||||||||||||    
T  4511638 caaaataacttaaagaatcaatctgttacaaacttcaaacttaaag 4511683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 509
Target Start/End: Complemental strand, 5009247 - 5009160
Alignment:
Q  425 aatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaag 509  Q
    ||||||||| |||||  || |||||||||||| ||||||| ||||||||||||||   | |||| | |||||||||| ||||||||||    
T  5009247 aatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 5009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 29379903 - 29379968
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||| ||||||| |||| |||||||| |||| ||| |||| |||||||||| ||||||||||||    
T  29379903 ttaaagaacttatgtgtgaccaaaataatttaaaggactaatatgttacaaacgtcaaacttaaag 29379968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 36694524 - 36694589
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| |||||||| |||| |||  |||||||||||||| ||||| ||||||    
T  36694524 ttaaaggacttatgtgtgaccaaaataatttaaaggaccaatctgttacaaacctcaaaattaaag 36694589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 43699449 - 43699514
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| |||| |||||||| |||| |||| ||| |||||||||| ||||||||||||    
T  43699449 ttaaaagacttatgtgtgaccaaaataaattaaaggatcaatatgttacaaacctcaaacttaaag 43699514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 44556653 - 44556585
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| |||||||||||||||| |||||  |||||| | |||||||||| ||||||||||||    
T  44556653 cttaaaggacttatgtgtgatcaaaataagttaaaggatcaatttattacaaacctcaaacttaaagga 44556585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 9501032 - 9500908
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaa-agtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| ||||  |||||||||||| | |   ||||||||||||| ||||||||||  | |||| || |||| |||||||||||||  ||||    
T  9501032 ttaaaggacttatgtgtgactaaaataacttaaagaagcgatctgttacaaacctcaaacttaagggacttaagtgtgaccaaaataacttaaaggacca 9500933  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||||||| | |||| || ||||||    
T  9500932 atctgttacagacctaaaacttaaa 9500908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 33847703 - 33847770
Alignment:
Q  446 ttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||| ||||| ||||||| ||||||||||||||  | ||||||||||||||| | ||||||||||||    
T  33847703 ttaaaggacttatgtgtgaccaaaataacttaaaggaacaatatgttacaaacatcaaacttaaagga 33847770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 515
Target Start/End: Complemental strand, 1316141 - 1316031
Alignment:
Q  408 aaaataacttaaaaacca-atctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 504  Q
    ||||||||||||| | || || ||||| |||||| || | |||| ||||| ||||||| ||||||||||||||  ||| || | |||||||||| ||| |    
T  1316141 aaaataacttaaagaacatatatgttacaaacctcaaacataaaggacttatgtgtgaccaaaataacttaaacgatctatctattacaaacctcaaatt 1316042  T
Q  505 taaaggatcct 515  Q
    |||||||||||    
T  1316041 taaaggatcct 1316031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 511
Target Start/End: Complemental strand, 31630189 - 31630067
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaa-tat 487  Q
    |||| ||||||| |||| |||||||||||||  | |||||||||| |||||| || |||||| |||||  |||||| |||||||| ||| || ||| | |    
T  31630189 aaagacttatgtgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacttaaa-gacttaggtgtgaccaaaataatttataaacaaatct 31630091  T
Q  488 gttacaaaccttaaacttaaagga 511  Q
     |||||||||| ||||||||||||    
T  31630090 attacaaacctcaaacttaaagga 31630067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 511
Target Start/End: Original strand, 25895132 - 25895193
Alignment:
Q  452 gacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||| |||||||  |||||||||||||   ||||| |||||||||||||||||||||||||    
T  25895132 gacttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaacttaaagga 25895193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 438
Target Start/End: Original strand, 4511597 - 4511670
Alignment:
Q  367 aatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaac 438  Q
    ||||||||||||||| |||||||||| |  |||||||| || ||||||||||||| || |||||||||| ||||    
T  4511597 aatctgttacaaactccaaacttaaattatttatgtctaaccaaaataacttaaagaatcaatctgttacaaac 4511670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 1316101 - 1316037
Alignment:
Q  329 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||| |||| |||||||||||||  |||  |||| |||||||| ||||| ||||||    
T  1316101 taaaggacttatgtgtgaccaaaataacttaaacgatctatctattacaaacctcaaatttaaag 1316037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 1316163 - 1316095
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa-atca-atatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| |||| ||||||||||||||||| | || ||||||||||||||| |||| |||||||    
T  1316163 cttaaaggacttatgtgcgatcaaaataacttaaagaacatatatgttacaaacctcaaacataaagga 1316095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 3876949 - 3877013
Alignment:
Q  329 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||| |||| |||||||||||||  ||| ||| | |||||||| ||||| ||||||    
T  3876949 taaaggacttatgtgtgaccaaaataacttaaaagatcaatttattacaaacctcaaatttaaag 3877013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 11791813 - 11791873
Alignment:
Q  332 aggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||||| |||| |||||||||||||  ||   |||| ||||||||||||||||||||    
T  11791813 aggacttatgtgtgaccaaaataacttaaatgacatatctattacaaacttcaaacttaaa 11791873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 30265450 - 30265382
Alignment:
Q  325 aaattaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||| ||| ||| |||| |||||||| ||||||||  ||| | |||||||| ||||||||||||    
T  30265450 aaattaaagaactgatgcgtgaccaaaataatttaatggaccaatttattacaaacctcaaacttaaag 30265382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 408 - 508
Target Start/End: Original strand, 12277 - 12377
Alignment:
Q  408 aaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaa 507  Q
    ||||||| ||||| |||||||||||| |||||| || ||||| |||||| | |||||||||||||||||||||||||| | |||||||||| ||||||||    
T  12277 aaaataagttaaagaccaatctgttacaaacctcaaacttaattgacttatatgtgatcaaaataacttaaaatcaatctattacaaacctcaaacttaa 12376  T
Q  508 a 508  Q
    |    
T  12377 a 12377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 516
Target Start/End: Complemental strand, 12180 - 12046
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat 481  Q
    |||||||||||  ||| ||| |||| ||||||||||||  |||||| ||||| ||| || || |||||| |   | ||||||| ||||||||||| |||     
T  12180 caaacttaaaggacttgtgtgtgacaaaaataacttaaggaccaatttgttacaaatctcaaacttaaagggtatatgtgtgaccaaaataacttgaaac 12081  T
Q  482 caatatgttacaaaccttaaacttaaaggatcctt 516  Q
    |||| | |||||||||| |||||||||||| ||||    
T  12080 caatttattacaaacctcaaacttaaaggaccctt 12046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 24059797 - 24059667
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    |||||||||||  ||||||| |||| ||||||| |||||  | ||||||||||||||||| || |||||| ||||| |||| |  |||| ||||||||||    
T  24059797 caaacttaaaggacttatgtgtgaccaaaataatttaaatgatcaatctgttataaacctcaaacttaaaggacttatgtggggccaaagtaacttaaaa 24059698  T
Q  481 tcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||||||||||||| ||||||||||||    
T  24059697 tcaatatgttacaaacctcaaacttaaagga 24059667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 21598572 - 21598448
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| | |||||||||||||||| |||  |||||||||||||| ||||||||||| | |||||||   || |||||||||||||  ||||    
T  21598572 ttaaaggacttatgtgggatcaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgcaaccaaaataacttaaaggacca 21598473  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    ||||||||||||||| || ||||||    
T  21598472 atctgttataaacctcaaacttaaa 21598448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 510
Target Start/End: Original strand, 35050736 - 35050917
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaa-accaa 426  Q
    |||||| ||||||| |||||| ||||||||||| |||  |||||||||||||| | |||||||||| |    || | ||  ||||||||||||  |||||    
T  35050736 ttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaaggc----gtgttacctaaataacttaaaggaccaa 35050831  T
Q  427 tctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagg 510  Q
    ||||||| |||| |||| |||||| ||||| || |||| | ||||||||||||  |||||| | |||||||||| |||||||||||    
T  35050832 tctgttacaaactttaaacttaaaggacttatgcgtgacctaaataacttaaaggatcaatttattacaaacctcaaacttaaagg 35050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 17136971 - 17136878
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||||||| |||| ||||||||||||| | ||||||||||||||||| ||||||||||| | |||||||  ||| |||||||||||||    
T  17136971 ttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaacttaaatgacttatgtgagaccaaaataacttaaa 17136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 367 - 524
Target Start/End: Complemental strand, 10356409 - 10356248
Alignment:
Q  367 aatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtga 464  Q
    ||||| |||||||  ||||||||||||  |||| || |||| ||||||||||||| ||||||||||||| |||  | || |||||| ||||| |||||||    
T  10356409 aatctattacaaatatcaaacttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaatatcaaacttaaaggacttatgtgtga 10356310  T
Q  465 tcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatccttagtataat 524  Q
     |||||||| |||||  |  ||| |||||||||||| |||||||||||| || |||| ||||    
T  10356309 ccaaaataatttaaaggactaatttgttacaaacctcaaacttaaaggacccctagtgtaat 10356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 410 - 524
Target Start/End: Complemental strand, 35225502 - 35225385
Alignment:
Q  410 aataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaactta 506  Q
    |||||||||||  |||||||||||| ||||||||| |||||| || || ||| ||| ||||||||||||||  | |||| |||||||||||| |||||||    
T  35225502 aataacttaaaggaccaatctgttacaaaccttaaacttaaaggatttatgtatgaccaaaataacttaaaggaccaatttgttacaaacctcaaactta 35225403  T
Q  507 aaggatccttagtataat 524  Q
    ||||| || |||| ||||    
T  35225402 aaggacccctagtgtaat 35225385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 21598651 - 21598783
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||| |||||||||||||  |||||| ||||| |||||  || |||||| ||||| |||| || ||||||||||||||     
T  21598651 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaaccacaaacttaaaggacttatgtgagaacaaaataacttaaag 21598750  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||||| ||||||||||||    
T  21598751 gaccaatctgttacaaacctcaaacttaaagga 21598783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 9982737 - 9982673
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||||||||| ||||||||||||| |||| |||| ||| |||||||||| |||||||||||    
T  9982737 ttaaaggacttatgtgtgatcaaaataatttaaaggatgaatatgttacaaacctcaaacttaaa 9982673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 21598656 - 21598780
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| ||||||||||  |||||||||| | |||||||  ||  |||||||||||||  ||||    
T  21598656 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaaccacaaacttaaaggacttatgtgagaacaaaataacttaaaggacca 21598755  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||||||| |||||| || ||||||    
T  21598756 atctgttacaaacctcaaacttaaa 21598780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 35225525 - 35225401
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||| ||||||| ||||||| |||||||||| |||  |||||||||||||| | ||||||||| |  |||||| |||| |||||||||||||  ||||    
T  35225525 ttaaagaacttatgtgtgatcagaataacttaaaggaccaatctgttacaaaccttaaacttaaaggatttatgtatgaccaaaataacttaaaggacca 35225426  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    || ||||| |||||| || ||||||    
T  35225425 atttgttacaaacctcaaacttaaa 35225401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 9982759 - 9982673
Alignment:
Q  424 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 508  Q
    |||||||||| ||| || || |||||| ||||| |||||||||||||||| |||||  || |||||||||||||||| |||||||||    
T  9982759 caatctgttacaaaactcaaacttaaaggacttatgtgtgatcaaaataatttaaaggatgaatatgttacaaacctcaaacttaaa 9982673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 517
Target Start/End: Original strand, 9982875 - 9983013
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  |||||||  ||| |||| ||||||||  |||||| ||||| ||||  ||| |||||| ||||| ||||||| ||||||||||||||     
T  9982875 caaacttaaaggacttatgtgagacaaaaagaacttaaaggaccaatatgttacaaactctaaacttaaaggacttatgtgtgaccaaaataacttaaag 9982974  T
Q  480 -atcaatatgttacaaaccttaaacttaaaggatcctta 517  Q
     |||||| |||||||| ||| |||||||||||| |||||    
T  9982975 gatcaatttgttacaatcctcaaacttaaaggaccctta 9983013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 422 - 510
Target Start/End: Original strand, 35050712 - 35050802
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagg 510  Q
    |||||||||||| ||| || || ||||||  |||| ||||||||| ||||||||||||  | |||| ||||||||||||||||||||||||    
T  35050712 accaatctgttacaaatctcaaacttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaagg 35050802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 479
Target Start/End: Complemental strand, 17136968 - 17136878
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 479  Q
    |||| ||||||| |||| ||||||||||||| ||  ||||||||| |||||| || |||||||||||| |||| || ||||||||||||||    
T  17136968 aaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaacttaaatgacttatgtgagaccaaaataacttaaa 17136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 9982940 - 9983005
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| ||||||||||||| |||| ||| |||||||| | ||||||||||||    
T  9982940 ttaaaggacttatgtgtgaccaaaataacttaaaggatcaatttgttacaatcctcaaacttaaag 9983005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 10356328 - 10356263
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| |||||||| |||| ||| |||| |||||||||| ||||||||||||    
T  10356328 ttaaaggacttatgtgtgaccaaaataatttaaaggactaatttgttacaaacctcaaacttaaag 10356263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 10356467 - 10356599
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| || | |||||||||||||| |||||||||||| ||| || || |||||| ||||| ||||| | ||||||||| ||||     
T  10356467 caaacttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgttacaaatctcaaacttaaaggacttatgtgttaccaaaataacctaaag 10356566  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||| | ||||||||||||    
T  10356567 gaccaatctgttacaaacgtcaaacttaaagga 10356599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 21598716 - 21598781
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| | || ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  21598716 ttaaaggacttatgtgagaacaaaataacttaaaggaccaatctgttacaaacctcaaacttaaag 21598781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 524
Target Start/End: Complemental strand, 21598551 - 21598432
Alignment:
Q  408 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 504  Q
    |||||||||||||  |||||||||||| |||||| || |||||| ||||| ||||  | ||||||||||||||  | |||| ||||| |||||| |||||    
T  21598551 aaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgtgcaaccaaaataacttaaaggaccaatctgttataaacctcaaact 21598452  T
Q  505 taaaggatccttagtataat 524  Q
    ||||||| ||| ||| ||||    
T  21598451 taaaggaccctgagtgtaat 21598432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 364117 - 363984
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-- 479  Q
    |||||||||||  ||||| | |||| |||| |||||||||| |||||||||| ||||||||| |||||| ||||| ||| | | |||||||| |||||      
T  364117 caaacttaaagaacttatttgtgaccaaaacaacttaaaaatcaatctgttacaaaccttaaacttaaaggacttctgtttaaccaaaataatttaaaga 364018  T
Q  480 atcaatatgttacaaaccttaaacttaaaggatcc 514  Q
    |||| | | |||||||| | |||||||||||||||    
T  364017 atca-tctattacaaacttaaaacttaaaggatcc 363984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 512
Target Start/End: Complemental strand, 35225518 - 35225457
Alignment:
Q  453 acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggat 512  Q
    |||| |||||||||| |||||||||||  | |||| ||||||||||||||||||||||||||    
T  35225518 acttatgtgtgatcagaataacttaaaggaccaatctgttacaaaccttaaacttaaaggat 35225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 10356388 - 10356295
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||| | |||| ||||||||||||| | |  |||||||||||||  ||||||||||| | ||||||| |||| ||||||| |||||    
T  10356388 ttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgttacaaatatcaaacttaaaggacttatgtgtgaccaaaataatttaaa 10356295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 10356532 - 10356597
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| || | ||||||||| ||| |||  |||||||||||||| ||||||||||||    
T  10356532 ttaaaggacttatgtgttaccaaaataacctaaaggaccaatctgttacaaacgtcaaacttaaag 10356597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 17342651 - 17342744
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| |||| | ||||||||||| |||  ||  |||||||||| |||||||| |||| ||||||| | || |||||||||||||    
T  17342651 ttaaaggacttatgtgtgaccgaaataacttaaaggaccaacatgttacaaacctcaaacttaaaagacttatgtattaccaaaataacttaaa 17342744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 21598573 - 21598505
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| |||| |||||||||||||||||  | |||| |||||||||||| ||||||||||||    
T  21598573 cttaaaggacttatgtgggatcaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagga 21598505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 24059792 - 24059727
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| |||||||| ||||  ||| ||||||||| |||| ||||||||||||    
T  24059792 ttaaaggacttatgtgtgaccaaaataatttaaatgatcaatctgttataaacctcaaacttaaag 24059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 17342646 - 17342776
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| ||||  ||||||||||||  |||||  ||||| |||||| || |||||| ||||| ||| | | ||||||||||||||     
T  17342646 caaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaacatgttacaaacctcaaacttaaaagacttatgtattaccaaaataacttaaag 17342745  T
Q  480 -atcaatatgttacaaaccttaaacttaaag 509  Q
     | ||| ||||||||||||| ||||||||||    
T  17342746 gaccaacatgttacaaacctcaaacttaaag 17342776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 508
Target Start/End: Complemental strand, 17136972 - 17136907
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaaccttaaacttaaa 508  Q
    |||||| ||||| ||||||| |||||||||||||  ||| ||| |||||||||||| |||||||||    
T  17136972 cttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgttacaaacctcaaacttaaa 17136907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 9982797 - 9982732
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| | || |||||||||| || |||| |||||||||||||  ||||||||||||    
T  9982797 ttaaaagacttatgtgcgaccaaaataactcaaaggatcaatctgttacaaaactcaaacttaaag 9982732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 9982880 - 9982973
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| | ||  |||| ||||||| |||  ||| |||||||||||  ||||||||| | ||||||| |||| |||||||||||||    
T  9982880 ttaaaggacttatgtgagacaaaaagaacttaaaggaccaatatgttacaaactctaaacttaaaggacttatgtgtgaccaaaataacttaaa 9982973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 17136911 - 17136846
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| | || ||||||||||||| ||| |||||| |||||||| ||||| ||||||    
T  17136911 ttaaatgacttatgtgagaccaaaataacttaaaggactaatctattacaaacctcaaatttaaag 17136846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 21598512 - 21598447
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |  | ||||||||||||| |||  ||||||||| |||| ||||||||||||    
T  21598512 ttaaaggacttatgtgcaaccaaaataacttaaaggaccaatctgttataaacctcaaacttaaag 21598447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 35050663 - 35050598
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| || ||||| ||||  |||||||||||| ||| |||||| |||| ||||||||||||||||    
T  35050663 ttaaaagatttatgtgtgacaaaaataacttaaaggactaatctcttacgaacttcaaacttaaag 35050598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 35050715 - 35050800
Alignment:
Q  367 aatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaa 450  Q
    |||||||||||||  ||||||||||||  ||||||| |||   ||||||||||||  |||||||||||| ||||||||| ||||||    
T  35050715 aatctgttacaaatctcaaacttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgttacaaaccttaaacttaaa 35050800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 35225465 - 35225400
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||| |||||  ||| ||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  35225465 ttaaaggatttatgtatgaccaaaataacttaaaggaccaatttgttacaaacctcaaacttaaag 35225400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 481
Target Start/End: Complemental strand, 2761529 - 2761493
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaat 481  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  2761529 cttaaaggacttatgtgtgatcaaaataacttaaaat 2761493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 360
Target Start/End: Complemental strand, 2761528 - 2761496
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaa 360  Q
    |||||||||||||| ||||||||||||||||||    
T  2761528 ttaaaggacttatgtgtgatcaaaataacttaa 2761496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 438
Target Start/End: Original strand, 10356472 - 10356584
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| |||   ||||||||||||  ||  |||||||||||||  ||||||||||| | ||||||| | || |||||||| ||||  ||||    
T  10356472 ttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgttacaaatctcaaacttaaaggacttatgtgttaccaaaataacctaaaggacca 10356571  T
Q  426 atctgttataaac 438  Q
    |||||||| ||||    
T  10356572 atctgttacaaac 10356584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 9e-22; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 390 - 511
Target Start/End: Original strand, 18020035 - 18020159
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaata 486  Q
    |||| ||||||| | || |||||||||||||  |||||||||||||||||||||| |||||| ||||| ||| ||| |||||||||||||  |||||||     
T  18020035 aaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaacttaaaggacttatgtttgaccaaaataacttaaataatcaatc 18020134  T
Q  487 tgttacaaaccttaaacttaaagga 511  Q
    | |||||||||| ||||||||||||    
T  18020135 tattacaaacctcaaacttaaagga 18020159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 328 - 454
Target Start/End: Complemental strand, 46337629 - 46337501
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||| ||||  |||| ||||||||||||| | |||||| |||||||||||||||||||||| | ||||||| |||| ||||||| ||||| || ||    
T  46337629 ttaaaggatttatctgtgaccaaaataacttaaagaattaatatgttacaaacttcaaacttaaaggacttatgtgtgaccaaaataatttaaagaatca 46337530  T
Q  426 atctgttataaaccttaagcttaaatgac 454  Q
    || ||||| |||||| || ||||||||||    
T  46337529 atatgttacaaacctcaaacttaaatgac 46337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 47069647 - 47069528
Alignment:
Q  395 cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    ||||||| |||| ||||||||| ||| ||||||| ||||| ||| || || ||||||  |||| ||||||||||||||||||||||  | ||||||||||    
T  47069647 cttatgtgtgaccaaaataactaaaagaaccaatttgttacaaaactcaaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaatatgtta 47069548  T
Q  492 caaaccttaaacttaaagga 511  Q
    ||||||| ||| ||||||||    
T  47069547 caaacctcaaatttaaagga 47069528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 47891392 - 47891455
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||||||||||||    
T  47891392 aaaggacttatgtgtgatcaaaataacttaaaggatcaatttgttacaaatttcaaacttaaag 47891455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 480
Target Start/End: Original strand, 25848508 - 25848662
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 425  Q
    ||||||||| |||| |||| ||||||||||||| |||  ||| |||||||||| | ||| ||||| | ||||||| ||| ||||||||||||||| | ||    
T  25848508 ttaaaggacatatgtgtgaccaaaataacttaaaggaccaatgtgttacaaacctaaaatttaaaggacttatgtgtgattaaaataacttaaaagatca 25848607  T
Q  426 atctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    || | ||| |||||| || ||| || ||||| ||||| | |||||||||||||||    
T  25848608 atttattacaaacctcaaactttaaggacttatgtgttaccaaaataacttaaaa 25848662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 516
Target Start/End: Original strand, 47891333 - 47891462
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 486  Q
    |||| ||||||| |||| |||||||||||||  |||||| ||||  |||||| || || ||| ||||| ||||||||||||||||||||||  ||||||     
T  47891333 aaagacttatgtgtgaccaaaataacttaaaggaccaatatgttgcaaacctcaaactcaaaggacttatgtgtgatcaaaataacttaaaggatcaatt 47891432  T
Q  487 tgttacaaaccttaaacttaaaggatcctt 516  Q
    |||||||||  | |||||||||||| ||||    
T  47891433 tgttacaaatttcaaacttaaaggaccctt 47891462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 524
Target Start/End: Original strand, 40286473 - 40286597
Alignment:
Q  403 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacctt 499  Q
    |||||||||||||| |||| |||||||||||| |||||| || |||||| ||||| |||| ||| |||||||||||||  |||||   |||||||||||     
T  40286473 tgactaaaataactcaaaagaccaatctgttacaaacctcaaacttaaaggacttatgtgcgataaaaataacttaaaggatcaaacggttacaaacctc 40286572  T
Q  500 aaacttaaaggatccttagtataat 524  Q
    ||| |||||||| || | |||||||    
T  40286573 aaatttaaaggacccctggtataat 40286597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 252173 - 252049
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||  |||| |||||||||||||  || | ||||||||||||| | ||||||||| | |||| || |||| |||||||||||||  ||||    
T  252173 ttaaaggacttatttgtgaccaaaataacttaaaagactgatctgttacaaaccttaaacttaaaggacttacgtgtgaccaaaataacttaaatgacca 252074  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||| |||||||||| || ||||||    
T  252073 atctattataaacctcaaacttaaa 252049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 425 - 513
Target Start/End: Complemental strand, 25848375 - 25848285
Alignment:
Q  425 aatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatc 513  Q
    ||||| ||| |||||| || |||||| ||||||||||||| ||||||||||||||  |||||| | ||||||| || ||||||||||||||    
T  25848375 aatctattacaaacctcaaacttaaaggacttgtgtgtgaccaaaataacttaaaggatcaatttattacaaatctcaaacttaaaggatc 25848285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 397 - 511
Target Start/End: Original strand, 25848518 - 25848635
Alignment:
Q  397 tatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttaca 493  Q
    ||||| |||| |||||||||||||  |||||| ||||| |||||| ||  ||||| ||||| |||||||| |||||||||||||  |||||| | |||||    
T  25848518 tatgtgtgaccaaaataacttaaaggaccaatgtgttacaaacctaaaatttaaaggacttatgtgtgattaaaataacttaaaagatcaatttattaca 25848617  T
Q  494 aaccttaaacttaaagga 511  Q
    ||||| |||||| |||||    
T  25848618 aacctcaaactttaagga 25848635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 25848568 - 25848693
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaaa--acc 424  Q
    |||||||||||||| ||||| ||||||||||||  ||| ||| | |||||||| |||||| |||| | ||||||| | || ||||||||||||||  |||    
T  25848568 ttaaaggacttatgtgtgattaaaataacttaaaagatcaatttattacaaacctcaaactttaaggacttatgtgttaccaaaataacttaaaaggacc 25848667  T
Q  425 aatctgttataaaccttaagcttaaa 450  Q
    ||| | |||||||||| || ||||||    
T  25848668 aatttattataaacctcaaacttaaa 25848693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 40286305 - 40286244
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt 389  Q
    |||||||||||||| |||||||||||||||| | ||| |||| |||||||||| ||||||||    
T  40286305 ttaaaggacttatgtgtgatcaaaataacttgaaggactaatttgttacaaacatcaaactt 40286244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 508
Target Start/End: Complemental strand, 46337613 - 46337505
Alignment:
Q  403 tgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacctt 499  Q
    |||| ||||||||||||| ||  ||| ||||| |||| | || |||||| ||||| ||||||| |||||||| |||||  |||||||||||||||||||     
T  46337613 tgaccaaaataacttaaagaattaatatgttacaaacttcaaacttaaaggacttatgtgtgaccaaaataatttaaagaatcaatatgttacaaacctc 46337514  T
Q  500 aaacttaaa 508  Q
    |||||||||    
T  46337513 aaacttaaa 46337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 40209880 - 40210010
Alignment:
Q  383 caaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-a 480  Q
    |||||||||| | ||||||| |||| |||||| ||||||| ||||||||||  | |||| || |||||| || || ||||||| |||||||| ||||| |    
T  40209880 caaacttaaacgacttatgtgtgaccaaaatatcttaaaa-ccaatctgttcgagacctcaaacttaaa-gaattatgtgtgaccaaaataaattaaaga 40209977  T
Q  481 tcaatatgttacaaaccttaaacttaaaggatc 513  Q
    ||||||||||| ||| || ||||||||||||||    
T  40209978 tcaatatgttagaaatctcaaacttaaaggatc 40210010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 509
Target Start/End: Complemental strand, 252178 - 252048
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||| | |||| |||||||||||||| ||  |||||||| ||||||||| |||||| |||||  |||||| ||||||||||||||     
T  252178 caaacttaaaggacttatttgtgaccaaaataacttaaaagactgatctgttacaaaccttaaacttaaaggacttacgtgtgaccaaaataacttaaat 252079  T
Q  480 -atcaatatgttacaaaccttaaacttaaag 509  Q
     | |||| | ||| |||||| ||||||||||    
T  252078 gaccaatctattataaacctcaaacttaaag 252048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 511
Target Start/End: Original strand, 26724238 - 26724347
Alignment:
Q  403 tgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaacctta 500  Q
    |||| |||||||||||||| | ||||||||| | |||| ||  ||||| ||||| |||||||  ||||||||||||  ||||||| | |||||||||| |    
T  26724238 tgaccaaaataacttaaaa-ctaatctgttagagacctcaaatttaaaggacttatgtgtgacgaaaataacttaaagaatcaatctattacaaacctca 26724336  T
Q  501 aacttaaagga 511  Q
    |||||||||||    
T  26724337 aacttaaagga 26724347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 39541441 - 39541504
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||  |||| ||||||||||||| |||| |||| ||||||||| ||||||||||||    
T  39541441 aaaggacttatatgtgaccaaaataacttaaaggatcaatccgttacaaacctcaaacttaaag 39541504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 334 - 450
Target Start/End: Original strand, 39714575 - 39714693
Alignment:
Q  334 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaaaaccaatctgt 431  Q
    |||||||| || |||||||||| ||||  ||| ||| | |||||||| |||||||||||  |  |||||| |||| ||||||||||||| | ||||||||    
T  39714575 gacttatgtgtaatcaaaataatttaaatgatcaatttattacaaacctcaaacttaaaaggatttatgtgtgaccaaaataacttaaacatcaatctgt 39714674  T
Q  432 tataaaccttaagcttaaa 450  Q
    || |||||| || ||||||    
T  39714675 taaaaacctcaaacttaaa 39714693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 476
Target Start/End: Complemental strand, 40286370 - 40286275
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactt 476  Q
    |||||||||||  ||| ||| |||| |||||||||||||  | |||| |||||||||||| || |||||| ||||| |||||||||||||||||||    
T  40286370 caaacttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaaggacttatgtgtgatcaaaataactt 40286275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 420
Target Start/End: Complemental strand, 25848399 - 25848321
Alignment:
Q  343 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||| ||||||||||||| ||| |||||| |||||||| ||||||||||| | ||| ||| |||| |||||||||||||    
T  25848399 gtgaccaaaataacttaacggactaatctattacaaacctcaaacttaaaggacttgtgtgtgaccaaaataacttaaa 25848321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 480
Target Start/End: Complemental strand, 40209806 - 40209709
Alignment:
Q  383 caaacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    ||||||||||| ||||||| |||  |||| ||||||||| | |||||| ||| |||||| ||  |||||| |||| |||||||||||||||||||||||    
T  40209806 caaacttaaagacttatgtgtgaacaaaacaacttaaaagatcaatctattagaaacctcaaatttaaat-acttatgtgtgatcaaaataacttaaaa 40209709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 47573784 - 47573695
Alignment:
Q  424 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||| ||||| |||||| || |||||| ||||| |||||||| ||||||| |||||  |  |||||||||||||||| ||||||||||||    
T  47573784 caatatgttacaaacctcaaacttaaaagacttatgtgtgataaaaataatttaaaggactaatatgttacaaacctcaaacttaaagga 47573695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 440
Target Start/End: Complemental strand, 47891216 - 47891122
Alignment:
Q  348 caaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaacct 440  Q
    ||||||||||||| |||| |||||| ||||||| ||||||||||| | |||| || |||| ||||||| |||||| | |||||||||| ||||||    
T  47891216 caaaataacttaaaggatcaatctggtacaaacctcaaacttaaatgacttaggtgtgaccaaaataatttaaaagatcaatctgttacaaacct 47891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 3169797 - 3169716
Alignment:
Q  371 tgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaa 450  Q
    |||||||||| ||||||||||| |  |||| | |||||||||||||||||| ||||||||| ||| ||||||||| ||||||    
T  3169797 tgttacaaacctcaaacttaaaagatttatatgtgactaaaataacttaaagaaccaatctattacaaaccttaaacttaaa 3169716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 14964956 - 14964892
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| |||||||||||||  ||  |||||||||||||| ||||||||||||    
T  14964956 ttaaaggacttatgtgtgaccaaaataacttaaatgaccaatctgttacaaac-tcaaacttaaag 14964892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 26724280 - 26724345
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||  |||||||||||| | || ||||| |||||||| ||||||||||||    
T  26724280 ttaaaggacttatgtgtgacgaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 26724345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 449
Target Start/End: Original strand, 30954957 - 30955078
Alignment:
Q  330 aaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaat 427  Q
    |||||||||||| |||| ||||||||||| || |||  ||||| |||||||  |||||| |||| | ||||||| |||| ||||||||||||| || |||    
T  30954957 aaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaat 30955056  T
Q  428 ctgttataaaccttaagcttaa 449  Q
    || ||| |||||| || |||||    
T  30955057 ctattacaaacctcaaacttaa 30955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 330 - 449
Target Start/End: Original strand, 30970769 - 30970890
Alignment:
Q  330 aaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaat 427  Q
    |||||||||||| |||| ||||||||||| || |||  ||||| |||||||  |||||| |||| | ||||||| |||| ||||||||||||| || |||    
T  30970769 aaaggacttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaat 30970868  T
Q  428 ctgttataaaccttaagcttaa 449  Q
    || ||| |||||| || |||||    
T  30970869 ctattacaaacctcaaacttaa 30970890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 36667289 - 36667357
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||||| ||||||||||||||  |  ||| |||||||||||||||||||||||||    
T  36667289 cttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgttacaaaccttaaacttaaagga 36667357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 36667290 - 36667355
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| |||| ||||||||||||| |||  |||||||||||||| | ||||||||||    
T  36667290 ttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgttacaaaccttaaacttaaag 36667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 40286366 - 40286298
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||||| ||||||||||||||  | |||||||||| |||||| ||||||||||||    
T  40286366 cttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaagga 40286298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 47069595 - 47069530
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||| ||||||| |||||||||||||||||| |||  ||| |||||||||| ||||| ||||||    
T  47069595 ttaaagaacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacctcaaatttaaag 47069530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 47573762 - 47573697
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| ||||| ||||||| |||| ||| |||| |||||||||| ||||||||||||    
T  47573762 ttaaaagacttatgtgtgataaaaataatttaaaggactaatatgttacaaacctcaaacttaaag 47573697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 7607695 - 7607759
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaa-tcaatatgttacaaaccttaaacttaaa 508  Q
    |||||| ||||| || |||| ||||||||||||||| |||||||||||||||| | |||||||||    
T  7607695 cttaaaagacttatgcgtgaccaaaataacttaaaaatcaatatgttacaaacatcaaacttaaa 7607759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 18020032 - 18020156
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    ||||| |||||||| || | |||||||||||||  ||  ||||||||| |||| | ||||||||| | ||||||| |||| ||||||||||||| || ||    
T  18020032 ttaaaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaacttaaaggacttatgtttgaccaaaataacttaaataatca 18020131  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||| ||| |||||| || ||||||    
T  18020132 atctattacaaacctcaaacttaaa 18020156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 27768433 - 27768369
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||| ||||| |||||||||||||| |||  ||||||||| |||||||| ||| |||||||    
T  27768433 ttaaaggatttatgtgtgatcaaaataacataaatgattaatcttttacaaacatcatacttaaa 27768369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 507
Target Start/End: Original strand, 30954963 - 30955078
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-atcaatatgtta 491  Q
    ||||||| |||| ||||||||||||||  |||||||| ||| ||| || || | |||| ||||| ||||||| |||||||||||||| |  ||| | |||    
T  30954963 cttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaatctatta 30955062  T
Q  492 caaaccttaaacttaa 507  Q
    ||||||| ||||||||    
T  30955063 caaacctcaaacttaa 30955078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 507
Target Start/End: Original strand, 30970775 - 30970890
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa-atcaatatgtta 491  Q
    ||||||| |||| ||||||||||||||  |||||||| ||| ||| || || | |||| ||||| ||||||| |||||||||||||| |  ||| | |||    
T  30970775 cttatgtgtgaccaaaataacttaaaaggaccaatctcttacaaatctcaaacataaaggacttatgtgtgaccaaaataacttaaacactaatctatta 30970874  T
Q  492 caaaccttaaacttaa 507  Q
    ||||||| ||||||||    
T  30970875 caaacctcaaacttaa 30970890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 511
Target Start/End: Complemental strand, 32186545 - 32186462
Alignment:
Q  430 gttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||||||||| || |||||| |||||  |||||| ||||||| ||||||  | |||||| |||||||||| ||||||||||||    
T  32186545 gttataaacctcaaacttaaaagacttaggtgtgaccaaaatagcttaaaggaccaatatattacaaacctcaaacttaaagga 32186462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 511
Target Start/End: Original strand, 32186703 - 32186750
Alignment:
Q  466 caaaataacttaaaa--tcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||    
T  32186703 caaaataacttaaaacatcaatatgttacaaacctcaaacttaaagga 32186750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 453
Target Start/End: Complemental strand, 28813961 - 28813838
Alignment:
Q  331 aaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaaaaccaatct 429  Q
    ||||||||||| |||| |||||||||||||  ||| ||| | |||||||  ||||||||||||  ||||| | ||||  |||||||||||| | ||||||    
T  28813961 aaggacttatgtgtgaccaaaataacttaaatgatcaatttattacaaatctcaaacttaaagaacttatatgtgacctaaataacttaaagatcaatct 28813862  T
Q  430 gttataaaccttaagcttaaatga 453  Q
     ||| |||||| || |||| ||||    
T  28813861 attacaaacctcaaacttacatga 28813838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 39253848 - 39253793
Alignment:
Q  338 tatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||| ||||||||||||| |||| |||  ||| |||||||||||||||||||||||    
T  39253848 tatgtgtgatcaaaataagttaaaggaccaatttgttacaaacttcaaacttaaag 39253793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 394
Target Start/End: Original strand, 13903094 - 13903140
Alignment:
Q  348 caaaataacttaatggattaatctgttacaaacttcaaacttaaagt 394  Q
    ||||||||||||| |||||||| |||||||||| ||||| |||||||    
T  13903094 caaaataacttaaaggattaatatgttacaaacctcaaatttaaagt 13903140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 424
Target Start/End: Complemental strand, 40209796 - 40209706
Alignment:
Q  334 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaaacc 424  Q
    |||||||| |||| ||||| |||||||  ||| ||||| ||| |||| ||||| |||||  ||||||| |||  |||||||||||||||||    
T  40209796 gacttatgtgtgaacaaaacaacttaaaagatcaatctattagaaacctcaaatttaaatacttatgtgtgatcaaaataacttaaaaacc 40209706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 417
Target Start/End: Complemental strand, 40286365 - 40286275
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactt 417  Q
    ||||||||||| || |||| ||||||||||||| |||  ||| ||||| |||| ||||||||||| | ||||||| |||  ||||||||||    
T  40286365 ttaaaggacttctgtgtgaccaaaataacttaaaggaacaatatgttataaacctcaaacttaaaggacttatgtgtgatcaaaataactt 40286275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 43650111 - 43650017
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa 421  Q
    ||||| || ||||| ||||||||||||||||||  ||  ||||| |||||| | ||||||||||| |  |||||| |||| ||||||||||||||    
T  43650111 ttaaaagatttatgtgtgatcaaaataacttaaatgaccaatctcttacaatcctcaaacttaaaggatttatgtgtgacgaaaataacttaaaa 43650017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 47573911 - 47573969
Alignment:
Q  334 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||  |||| ||||||||||||| |||| ||||| |||||||| |||||||||||    
T  47573911 gacttatatgtgaccaaaataacttaaaggatcaatctattacaaacctcaaacttaaa 47573969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 498
Target Start/End: Complemental strand, 47891215 - 47891122
Alignment:
Q  408 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacct 498  Q
    |||||||||||||  | ||||||| || |||||| || ||||||||||||  |||||| |||||||| |||||  |||||| ||||||||||||    
T  47891215 aaaataacttaaaggatcaatctggtacaaacctcaaacttaaatgacttaggtgtgaccaaaataatttaaaagatcaatctgttacaaacct 47891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 509
Target Start/End: Original strand, 14624256 - 14624321
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaatc-aatatgttacaaaccttaaacttaaag 509  Q
    |||||| ||||| ||||||| || |||||||||||||| ||| | |||||||| ||||||||||||    
T  14624256 cttaaaagacttatgtgtgaccagaataacttaaaatctaatctattacaaacattaaacttaaag 14624321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 479
Target Start/End: Original strand, 14624260 - 14624348
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 479  Q
    |||| ||||||| |||| | |||||||||||| | ||||| ||| |||| |||| |||||| ||||| ||| |||||||||||| |||||    
T  14624260 aaagacttatgtgtgaccagaataacttaaaatctaatctattacaaacattaaacttaaa-gacttatgtatgatcaaaataatttaaa 14624348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 18020031 - 18020099
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||| | ||||||||||||||  | |||| ||||| |||||||||||||||||||    
T  18020031 cttaaaagacttatgtgtaaccaaaataacttaaacgaccaatctgttataaaccttaaacttaaagga 18020099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 18020092 - 18020157
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||||  ||| |||||||||||||   || ||||| |||||||| ||||||||||||    
T  18020092 ttaaaggacttatgtttgaccaaaataacttaaataatcaatctattacaaacctcaaacttaaag 18020157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 25848354 - 25848289
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||| || |||| ||||||||||||| |||| ||| | |||||||  ||||||||||||    
T  25848354 ttaaaggacttgtgtgtgaccaaaataacttaaaggatcaatttattacaaatctcaaacttaaag 25848289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 26976506 - 26976571
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| |||| ||||||||||||| ||| | || |||||||||  ||||||||||||    
T  26976506 ttaaatgacttatgtgtgaccaaaataacttaaaggacttatatgttacaaagctcaaacttaaag 26976571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 27768373 - 27768308
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| || ||||| || |||||||||||||||  ||| || || |||||||||||||||||||||    
T  27768373 ttaaaagatttatgtgtaatcaaaataacttaaatgatcaacctattacaaacttcaaacttaaag 27768308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 28814068 - 28814133
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||| |||||||  |||||||||||||||||  || |||||| |||||||| ||||| ||||||    
T  28814068 ttaaagaacttatgtctgatcaaaataacttaaaagactaatctattacaaacctcaaatttaaag 28814133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 36900083 - 36900151
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| || || |||| ||| |||||||||||||  |||||| | |||||||||||||||||||||||    
T  36900083 cttaaaggatttatgtgagattaaaataacttaaacgatcaatctcttacaaaccttaaacttaaagga 36900151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 40286517 - 40286582
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| | ||| |||||||||||| |||| || | ||||||||| ||||| ||||||    
T  40286517 ttaaaggacttatgtgcgataaaaataacttaaaggatcaaacggttacaaacctcaaatttaaag 40286582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 47573822 - 47573729
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||||||||| |  |||||||| |||| |||| ||| |||||||||| |||||||| |||| ||||||| |||  ||||||| |||||    
T  47573822 ttaaatgacttatgagcggccaaaataatttaaaggatcaatatgttacaaacctcaaacttaaaagacttatgtgtgataaaaataatttaaa 47573729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 47891329 - 47891397
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||||| ||||||||||||||  | ||||||||| ||||||| ||||| ||||||    
T  47891329 cttaaaagacttatgtgtgaccaaaataacttaaaggaccaatatgttgcaaacctcaaactcaaagga 47891397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 47891330 - 47891423
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||||||| |||| ||||||||||||| |||  ||| |||| ||||| ||||||| ||| | ||||||| |||  |||||||||||||    
T  47891330 ttaaaagacttatgtgtgaccaaaataacttaaaggaccaatatgttgcaaacctcaaactcaaaggacttatgtgtgatcaaaataacttaaa 47891423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 421
Target Start/End: Original strand, 50332664 - 50332737
Alignment:
Q  349 aaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa 421  Q
    |||||||||||  |||||||| ||| |||||| ||||||||||| | ||||||| | || ||||||||||||||    
T  50332664 aaaataacttagaggattaatttgtaacaaacctcaaacttaaaggacttatgtgtaaccaaaataacttaaaa 50332737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 50332703 - 50332768
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| || | |||||||||||||  ||| ||| | |||||||| ||||||||||||    
T  50332703 ttaaaggacttatgtgtaaccaaaataacttaaaagatcaatttattacaaacatcaaacttaaag 50332768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 498
Target Start/End: Original strand, 36375008 - 36375124
Alignment:
Q  383 caaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactt-aaaat 481  Q
    ||||||||||  ||||| | |||| ||||||| |||||   |||||| ||||||| || || ||||||  |||| ||  ||||||||||||||| ||||     
T  36375008 caaacttaaaaacttatttgtgaccaaaataatttaaaggtcaatctattataaatctcaaacttaaaaaacttatgcatgatcaaaataacttaaaaaa 36375107  T
Q  482 caatatgttacaaacct 498  Q
    |||| ||||||||||||    
T  36375108 caatctgttacaaacct 36375124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 36900084 - 36900208
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||| ||||| | ||| ||||||||||||  ||| ||||| |||||||| | ||||||||| | | ||||| | || |||||||||||||  ||||    
T  36900084 ttaaaggatttatgtgagattaaaataacttaaacgatcaatctcttacaaaccttaaacttaaaggacctatgtgtaaccaaaataacttaaaggacca 36900183  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||| ||||||| || || ||||||    
T  36900184 atctattataaatctcaaacttaaa 36900208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 39714642 - 39714694
Alignment:
Q  458 tgtgtgatcaaaataacttaaa-atcaatatgttacaaaccttaaacttaaag 509  Q
    ||||||| |||||||||||||| |||||| ||||| |||||| ||||||||||    
T  39714642 tgtgtgaccaaaataacttaaacatcaatctgttaaaaacctcaaacttaaag 39714694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 45131485 - 45131441
Alignment:
Q  349 aaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||  ||| |||||||||||||| ||||||||||||    
T  45131485 aaaataacttaaatgatcaatctgttacaaacctcaaacttaaag 45131441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 440
Target Start/End: Complemental strand, 47069653 - 47069541
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aaccaat 427  Q
    |||||||||||| |||| |||||||||| || | |  ||| |||||||||  ||||||||||||  ||||||| |||  |||||||||||||  ||||||    
T  47069653 aaaggacttatgtgtgaccaaaataactaaaagaaccaatttgttacaaaactcaaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaat 47069554  T
Q  428 ctgttataaacct 440  Q
     ||||| ||||||    
T  47069553 atgttacaaacct 47069541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 4e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 328 - 443
Target Start/End: Complemental strand, 15563971 - 15563855
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaa 426  Q
    ||||||||||||||  ||| ||||||||||| | | |||||| |||||||| | ||||||||||| | ||||||| ||||||||||||||||||||  ||    
T  15563971 ttaaaggacttatgtatgaccaaaataactttaagtattaatatgttacaaccctcaaacttaaaagacttatgtgtgactaaaataacttaaaaattaa 15563872  T
Q  427 tctgttataaaccttaa 443  Q
    ||||||| |||||||||    
T  15563871 tctgttacaaaccttaa 15563855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 27128093 - 27128212
Alignment:
Q  395 cttatgtctgactaaaataacttaaaaac--caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataa-cttaaaatcaatatgtta 491  Q
    ||||||| |||| |||||||||||||||   |||| ||||| ||||||||| |||||| |||||||||||||||||||||| || |||| |||| | |||    
T  27128093 cttatgtgtgaccaaaataacttaaaaagatcaatttgttagaaaccttaaacttaaaggacttgtgtgtgatcaaaataacctaaaaaccaatctatta 27128192  T
Q  492 caaaccttaaacttaaagga 511  Q
    ||||||| ||||||||||||    
T  27128193 caaacctcaaacttaaagga 27128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 41151524 - 41151405
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    ||||||| |||| |||||||||||||  ||||||||||||  || || || |||||| ||||| ||||||||||||||||||||||  | ||||||||||    
T  41151524 cttatgtgtgaccaaaataacttaaaggaccaatctgttactaaactcaaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgtta 41151425  T
Q  492 caaaccttaaacttaaagga 511  Q
    |||| || ||||||||||||    
T  41151424 caaaactcaaacttaaagga 41151405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 438
Target Start/End: Complemental strand, 27128001 - 27127892
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa-aaccaa 426  Q
    |||||||||||||| |||| ||||||||||||| | || |||||||||||||| |||||||||||  ||||||| |||  ||||||||||||| ||||||    
T  27128001 ttaaaggacttatgtgtgaccaaaataacttaaagaatcaatctgttacaaac-tcaaacttaaa-acttatgtgtgatcaaaataacttaaataaccaa 27127904  T
Q  427 tctgttataaac 438  Q
    ||||||| ||||    
T  27127903 tctgttacaaac 27127892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 6220393 - 6220517
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| |||| || |||||||||| | |  |||||||||||||  ||||||||||||  ||||||| |||| ||||||||||||| |||||    
T  6220393 ttaaaggacttatgtgtgaccacaataacttaaagtaccaatctgttacaaatctcaaacttaaagaacttatgtgtgacaaaaataacttaaagaacca 6220492  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    || ||||| |||||| || ||||||    
T  6220493 atttgttacaaacctcaaacttaaa 6220517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 479
Target Start/End: Original strand, 24083263 - 24083334
Alignment:
Q  408 aaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 479  Q
    ||||||||||||||| |||||||||| |||||| || |||||| | ||| ||||||||||||||||||||||    
T  24083263 aaaataacttaaaaatcaatctgttacaaacctcaaacttaaaagccttatgtgtgatcaaaataacttaaa 24083334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 395 - 529
Target Start/End: Complemental strand, 9399935 - 9399798
Alignment:
Q  395 cttatgtctgactaaaataacttaaaaac-caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    ||||||| |||| ||||||||||||| |  || ||| ||| ||||||||| |||||| |||||  |||||| |||| |||||||||  | ||||||||||    
T  9399935 cttatgtgtgaccaaaataacttaaagagtcactctattacaaaccttaaacttaaaggacttacgtgtgaccaaagtaacttaaagaaccaatatgtta 9399836  T
Q  492 caaaccttaaacttaaaggatccttagtataatctacc 529  Q
    ||||||| |||||||||||| || |||| |||| ||||    
T  9399835 caaacctcaaacttaaaggacccctagtgtaatgtacc 9399798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 41151679 - 41151741
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||||||| |||| ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  41151679 aaaggacttatgtgtgaccaaaataacttaaaggactaatctgttacaaacctcaaacttaaa 41151741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 24909609 - 24909741
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||  |||| ||||||| |||||  ||||||||| || |||||| || |||||| ||||| ||||||||||||||||||||||     
T  24909609 caaacttaaaggacttatgcgtgaccaaaataatttaaaggaccaatctgctacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaag 24909708  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| ||||||||| || ||||||||||||    
T  24909709 gaccaatttgttacaaatctcaaacttaaagga 24909741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 509
Target Start/End: Original strand, 27052625 - 27052729
Alignment:
Q  408 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaaccttaaact 504  Q
    |||||||||||||  ||||||||||||||||||| || |||||| ||||| |||| ||  ||||||||||||  ||||||| | |||||||||| |||||    
T  27052625 aaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattacaaacctcaaact 27052724  T
Q  505 taaag 509  Q
    |||||    
T  27052725 taaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 450
Target Start/End: Original strand, 27052613 - 27052728
Alignment:
Q  337 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttat 434  Q
    ||||| |||||||||||||||||| |||  ||||||||| |||| ||||||||||| | |||||||  ||| ||||||||||||| || |||||| |||     
T  27052613 ttatgtgtgatcaaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattac 27052712  T
Q  435 aaaccttaagcttaaa 450  Q
    |||||| || ||||||    
T  27052713 aaacctcaaacttaaa 27052728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 451
Target Start/End: Original strand, 41151616 - 41151742
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa-aacc 424  Q
    |||||||||||||| |||| ||||| ||||||| |||  ||||||||||||||  | ||||||||  | ||||||| |||| |||||||||||||  ||     
T  41151616 ttaaaggacttatgtgtgaccaaaagaacttaaaggaccaatctgttacaaaccacgaacttaaaaggacttatgtgtgaccaaaataacttaaaggact 41151715  T
Q  425 aatctgttataaaccttaagcttaaat 451  Q
    ||||||||| |||||| || |||||||    
T  41151716 aatctgttacaaacctcaaacttaaat 41151742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 20209465 - 20209597
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || | |||| ||||| ||||||| |||||||| |||||     
T  20209465 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaag 20209564  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     |  |||||||||||||||| ||| ||||||||    
T  20209565 gactaatatgttacaaacctcaaatttaaagga 20209597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 20209470 - 20209563
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaa 420  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| |||||| | |||| ||||||| |||| ||||||| |||||    
T  20209470 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaa 20209563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 20229173 - 20229305
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || | |||| ||||| ||||||| |||||||| |||||     
T  20229173 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaag 20229272  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     |  |||||||||||||||| ||| ||||||||    
T  20229273 gactaatatgttacaaacctcaaatttaaagga 20229305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 20229178 - 20229271
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaa 420  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| |||||| | |||| ||||||| |||| ||||||| |||||    
T  20229178 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaa 20229271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 511
Target Start/End: Complemental strand, 24827481 - 24827357
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 486  Q
    |||| ||||||| ||||||||||||||||||  || ||||| ||| |||| | || |||||| |||||   ||||||||| ||||||||||  | ||||     
T  24827481 aaagacttatgtgtgactaaaataacttaaatgacaaatctattacaaacatcaaacttaaaggacttagttgtgatcaatataacttaaatgaccaatc 24827382  T
Q  487 tgttacaaaccttaaacttaaagga 511  Q
    |||||||||||| ||||||||||||    
T  24827381 tgttacaaacctcaaacttaaagga 24827357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 24909614 - 24909707
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| |||| |||||||| |||| |||  |||||| ||||||| ||||||||||| | ||||||| |||  |||||||||||||    
T  24909614 ttaaaggacttatgcgtgaccaaaataatttaaaggaccaatctgctacaaacctcaaacttaaaggacttatgtgtgatcaaaataacttaaa 24909707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 24909674 - 24909739
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||||||||||||||||| |||  ||| |||||||||  ||||||||||||    
T  24909674 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatttgttacaaatctcaaacttaaag 24909739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 478
Target Start/End: Complemental strand, 27052556 - 27052443
Alignment:
Q  367 aatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtga 464  Q
    ||||| |||||||  ||||||||||||  ||||||| ||||  ||||||||||||  |||||| ||||| ||||||||| |||||||||||| | |||||    
T  27052556 aatctattacaaatctcaaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaatgacttatatgtga 27052457  T
Q  465 tcaaaataacttaa 478  Q
      ||||||||||||    
T  27052456 ctaaaataacttaa 27052443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 41151472 - 41151407
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||||||||||||||||| |||  ||| |||||||||  ||||||||||||    
T  41151472 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaaactcaaacttaaag 41151407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 6220401 - 6220520
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgtta 491  Q
    ||||||| |||| | |||||||||||  |||||||||||| ||| || || ||||||  |||| |||||||  ||||||||||||  || |||| |||||    
T  6220401 cttatgtgtgaccacaataacttaaagtaccaatctgttacaaatctcaaacttaaagaacttatgtgtgacaaaaataacttaaagaaccaatttgtta 6220500  T
Q  492 caaaccttaaacttaaagga 511  Q
    ||||||| ||||||||||||    
T  6220501 caaacctcaaacttaaagga 6220520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 419
Target Start/End: Complemental strand, 27052535 - 27052443
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaa 419  Q
    |||||||||||||| |||| | ||||||||||| |||  ||| |||||||||| | ||||||||| | ||||| | |||||||||||||||||    
T  27052535 ttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaatgacttatatgtgactaaaataacttaa 27052443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 423
Target Start/End: Original strand, 36053057 - 36053153
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaac 423  Q
    |||||| ||||||| ||||  |||||||||||| |||| ||| | |||||||| ||||| ||||| | ||||| | |||||||||||||||||||||    
T  36053057 ttaaagaacttatgtgtgactaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaaac 36053153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 420
Target Start/End: Complemental strand, 41151531 - 41151439
Alignment:
Q  329 taaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    ||||||||||||| |||| ||||||||||||| |||  |||||||||| ||  ||||||||||| | ||||||| |||  |||||||||||||    
T  41151531 taaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttactaaactcaaacttaaaggacttatgtgtgatcaaaataacttaaa 41151439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 513
Target Start/End: Original strand, 9400109 - 9400166
Alignment:
Q  458 tgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaaggatc 513  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| ||||||||| ||||    
T  9400109 tgtgtgaccaaaataacttaaacgatcaatatgttacaaacctcaaacttaaaagatc 9400166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 508
Target Start/End: Complemental strand, 27052560 - 27052471
Alignment:
Q  421 aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 508  Q
    ||||||||| ||| ||| || || |||||| ||||| ||||||| | ||||||||||||  | |||| ||||||||||||||||||||||    
T  27052560 aaccaatctattacaaatctcaaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgttacaaaccttaaacttaaa 27052471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 27128006 - 27127878
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa-- 478  Q
    |||||||||||  ||||||| |||| ||||||||||||| || |||||||||| |||| | || ||||||  |||| |||||||||||||||||||||      
T  27128006 caaacttaaaggacttatgtgtgaccaaaataacttaaagaatcaatctgttacaaac-tcaaacttaaa--acttatgtgtgatcaaaataacttaaat 27127910  T
Q  479 aatcaatatgttacaaaccttaaacttaaagga 511  Q
    || |||| ||||||||| || ||||||||||||    
T  27127909 aaccaatctgttacaaa-ctcaaacttaaagga 27127878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 509
Target Start/End: Complemental strand, 27855648 - 27855559
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaag 509  Q
    ||||||||| || ||||||  | ||||||||| || |||||| |||||||||||||||  | |||| | |||||||||||||||||||||    
T  27855648 accaatctgctacaaacctcgaacttaaatgatttatgtgtgttcaaaataacttaaaggaccaatctattacaaaccttaaacttaaag 27855559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 512
Target Start/End: Complemental strand, 22813176 - 22813116
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaaggat 512  Q
    |||||||||||| |||||||||||||||||||       ||||||||||||||| |||||||||||||    
T  22813176 cttaaatgacttatgtgtgatcaaaataactt-------atatgttacaaacctcaaacttaaaggat 22813116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 460 - 508
Target Start/End: Original strand, 24083256 - 24083305
Alignment:
Q  460 tgtgatcaaaataacttaaaa-tcaatatgttacaaaccttaaacttaaa 508  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  24083256 tgtgatcaaaataacttaaaaatcaatctgttacaaacctcaaacttaaa 24083305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 429
Target Start/End: Original strand, 24083257 - 24083344
Alignment:
Q  343 gtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa-aaccaatct 429  Q
    ||||||||||||||||||   || |||||||||||||| |||||||| |||| ||||||| |||  ||||||||||||| |||||||||    
T  24083257 gtgatcaaaataacttaaaa-atcaatctgttacaaacctcaaacttaaaagccttatgtgtgatcaaaataacttaaataaccaatct 24083344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 517
Target Start/End: Complemental strand, 6220307 - 6220177
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 486  Q
    |||| ||||||| |||| ||||| |||||||  ||||||| |||| |||||| || |||||| ||||| | ||| |  |||||||||||||  | ||||     
T  6220307 aaagacttatgtgtgacaaaaattacttaaatgaccaatcagttacaaacctcaaacttaaaggacttatctgttacaaaaataacttaaaggaccaatt 6220208  T
Q  487 tgttacaaaccttaaacttaaaggatcctta 517  Q
    |||| ||||||| |||||||||||| |||||    
T  6220207 tgtttcaaacctcaaacttaaaggaccctta 6220177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 511
Target Start/End: Original strand, 27128092 - 27128153
Alignment:
Q  453 acttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||| ||||||| ||||||||||||||   |||||| ||||| |||||||||||||||||||    
T  27128092 acttatgtgtgaccaaaataacttaaaaagatcaatttgttagaaaccttaaacttaaagga 27128153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 24827424 - 24827359
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||   |||||||| |||||||||  ||  |||||||||||||| ||||||||||||    
T  24827424 ttaaaggacttagttgtgatcaatataacttaaatgaccaatctgttacaaacctcaaacttaaag 24827359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 27052664 - 27052729
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| | ||  |||||||||||| | || ||||| |||||||| ||||||||||||    
T  27052664 ttaaaggacttatgtgcgacaaaaataacttaaagaatcaatctattacaaacctcaaacttaaag 27052729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 509
Target Start/End: Original strand, 36053052 - 36053181
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    |||||||||||  ||||||| ||||||||||||||||||  | |||| | ||| |||||| ||  ||||||||||| | |||||  ||||||||||||||    
T  36053052 caaacttaaagaacttatgtgtgactaaaataacttaaaggatcaatattttacaaacctcaaatttaaatgacttatatgtgactaaaataacttaaaa 36053151  T
Q  481 tc-aatatgttacaaaccttaaacttaaag 509  Q
     | ||| | |||||||| | ||||||||||    
T  36053152 acaaatttattacaaacgtcaaacttaaag 36053181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 508
Target Start/End: Complemental strand, 15563912 - 15563848
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaa-tcaatatgttacaaaccttaaacttaaa 508  Q
    |||||| ||||| |||||||  |||||||||||||| | ||| |||||||||||||||| |||||    
T  15563912 cttaaaagacttatgtgtgactaaaataacttaaaaattaatctgttacaaaccttaaatttaaa 15563848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 458 - 511
Target Start/End: Original strand, 27052616 - 27052671
Alignment:
Q  458 tgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||||||||||||||||||||  | |||| ||||| |||||| ||||||||||||    
T  27052616 tgtgtgatcaaaataacttaaaggaccaatctgttataaacctcaaacttaaagga 27052671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 38414699 - 38414597
Alignment:
Q  408 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 504  Q
    |||| ||||||||| | |||||||||| |||||| || ||||||  | || |||||||||||||||| |||||  || |||||||||||||||| ||| |    
T  38414699 aaaaaaacttaaaacatcaatctgttacaaacctcaaacttaaaa-atttatgtgtgatcaaaataaattaaatgataaatatgttacaaacctcaaatt 38414601  T
Q  505 taaa 508  Q
    ||||    
T  38414600 taaa 38414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 4e-21; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 336 - 455
Target Start/End: Complemental strand, 6222198 - 6222078
Alignment:
Q  336 cttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttat 434  Q
    |||||| |||| |||||||||||||   | |||||||||||||| || |||||||||| ||||||| ||||||||||||||||||| |||||| | |||     
T  6222198 cttatgtgtgaccaaaataacttaaataactaatctgttacaaattttaaacttaaagacttatgtgtgactaaaataacttaaaagaccaatatattac 6222099  T
Q  435 aaaccttaagcttaaatgact 455  Q
    ||||||||| |||||| ||||    
T  6222098 aaaccttaaacttaaaggact 6222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 11975574 - 11975451
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaa 426  Q
    |||||||||||||| |||| || |||||||||| |||| ||| |||||||||| ||||||||||| | ||||||| || | |||||||||||||||| ||    
T  11975574 ttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaacttaaaggacttatgtgtgtcaaaaataacttaaaaactaa 11975475  T
Q  427 tctgttataaaccttaagcttaaa 450  Q
    | | ||| |||||| || ||||||    
T  11975474 tttattacaaacctcaaacttaaa 11975451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 29710387 - 29710322
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||  |||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  29710387 ttaaaggacttatatgtgaccaaaataacttaaaggattaatctgttacaaacgtcaaacttaaag 29710322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 30869610 - 30869703
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||| | ||||| |||||||||||| |||  |||||||||||||| ||||||||||||  ||||||| |||| |||||||||||||    
T  30869610 ttaaaggacttacgcgtgataaaaataacttaaaggaccaatctgttacaaacctcaaacttaaagaacttatgtatgaccaaaataacttaaa 30869703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 440
Target Start/End: Complemental strand, 46713337 - 46713224
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa-aaccaa 426  Q
    |||||||||||||| || || ||||||| ||||  || |||| | ||||||||||||||||||||| ||||||| |||| ||||||||||||| ||| ||    
T  46713337 ttaaaggacttatgtgttattaaaataatttaaatgactaatttattacaaacttcaaacttaaagacttatgtatgaccaaaataacttaaataactaa 46713238  T
Q  427 tctgttataaacct 440  Q
    ||| ||| ||||||    
T  46713237 tctattacaaacct 46713224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 511
Target Start/End: Complemental strand, 6222198 - 6222080
Alignment:
Q  395 cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat--caatatgtta 491  Q
    ||||||| |||| ||||||||||||| ||| ||||||||| |||  |||| |||||| ||||| |||||||  ||||||||||||||   |||||| |||    
T  6222198 cttatgtgtgaccaaaataacttaaataactaatctgttacaaattttaaacttaaa-gacttatgtgtgactaaaataacttaaaagaccaatatatta 6222100  T
Q  492 caaaccttaaacttaaagga 511  Q
    ||||||||||||||||||||    
T  6222099 caaaccttaaacttaaagga 6222080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 455
Target Start/End: Original strand, 27576541 - 27576670
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| |||| ||||||||| ||| |||  |||| ||||||||  ||||||||||| | ||||||| |||| |||||||||||||  ||||    
T  27576541 ttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaaggacca 27576640  T
Q  426 atctgttataaaccttaagcttaaatgact 455  Q
    |||||||| |||| | || |||||| ||||    
T  27576641 atctgttacaaacgtcaaacttaaaggact 27576670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 511
Target Start/End: Complemental strand, 29710467 - 29710320
Alignment:
Q  367 aatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgat 465  Q
    ||||| |||||||  |||||||||||| |||| || |||| |||||||||||||  |||||| ||||| |||  | || |||||| ||||| | |||||     
T  29710467 aatctattacaaatatcaaacttaaagacttaagtgtgaccaaaataacttaaaggaccaatatgttacaaatatcaaacttaaaggacttatatgtgac 29710368  T
Q  466 caaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||||||||||||  || ||| |||||||||| | ||||||||||||    
T  29710367 caaaataacttaaaggattaatctgttacaaacgtcaaacttaaagga 29710320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 420
Target Start/End: Original strand, 27280822 - 27280912
Alignment:
Q  331 aaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa 420  Q
    ||||||||||| || | ||||||||||||| |||| ||| |||||  ||| ||||||||||||| ||||||| |||| |||||||||||||    
T  27280822 aaggacttatgtgttaccaaaataacttaaaggatcaatttgttatgaacctcaaacttaaagtacttatgtgtgaccaaaataacttaaa 27280912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 41666357 - 41666419
Alignment:
Q  331 aaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||| |||||| ||||||||||| |||  |||||||||||||| ||||||||||||    
T  41666357 aaggacttatgtgtgatcgaaataacttaagggacaaatctgttacaaacctcaaacttaaag 41666419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 6694739 - 6694807
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||||| ||||||||||||||  | ||||||||||||||||| ||||||||||||    
T  6694739 cttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaacctcaaacttaaagga 6694807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 6694740 - 6694805
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| ||||||||||||| |||  ||| |||||||||| ||||||||||||    
T  6694740 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgttacaaacctcaaacttaaag 6694805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 11975575 - 11975507
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| ||||||| || |||||||||||  ||||||||||||||||||| ||||||||||||    
T  11975575 cttaaaggacttatgtgtgaccacaataacttaaaggatcaatatgttacaaacctcaaacttaaagga 11975507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 27280741 - 27280648
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||| | || | |||||||||||||  ||||||||| |||| ||| ||||||||||| | ||||||| || |||||||||||||||    
T  27280741 ttaaaggacttacgtgttaccaaaataacttaagtgattaatctcttacgaacctcaaacttaaatgacttatgtgtggctaaaataacttaaa 27280648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 27576536 - 27576668
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||| |||||||| ||||  ||||||| |||| |||  | || |||||||||||| ||||||| ||||||||||||||     
T  27576536 caaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaag 27576635  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||| | ||||||||||||    
T  27576636 gaccaatctgttacaaacgtcaaacttaaagga 27576668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 29710525 - 29710657
Alignment:
Q  383 caaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||| | ||||||| |||| |||||||||||||  ||||||| |||| ||| || || |||||||||||| ||||| | ||||||||| ||||     
T  29710525 caaacttaaatgacttatgtgtgacgaaaataacttaaaggaccaatccgttacaaatctcaaacttaaatgacttatgtgttaccaaaataacctaaaa 29710624  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||| | ||||||||||||    
T  29710625 gaccaatctgttacaaacgtcaaacttaaagga 29710657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 44293977 - 44294109
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||| ||||| | |||| |||||||||||||  | |||||||||| |||||| || | |||| ||||| ||||||| |||||||| |||||     
T  44293977 caaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaag 44294076  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     |  |||||||||||||||| ||| ||||||||    
T  44294077 gactaatatgttacaaacctcaaatttaaagga 44294109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 44293982 - 44294075
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaac-ttaaagtcttatgtctgactaaaataacttaaa 420  Q
    |||||| ||||||  |||| ||||||||||||| |||| |||||||||||||| |||||| | |||| ||||||| |||| ||||||| |||||    
T  44293982 ttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgttacaaacctcaaacgtaaaagacttatgtgtgaccaaaataatttaaa 44294075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 427
Target Start/End: Original strand, 4048423 - 4048523
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaa-cttcaaacttaaagtcttatgtctgactaaaataacttaaaaaccaa 426  Q
    |||||||||||||| || | |||||||||||||  ||| ||||||||||||| ||| || || ||||  |||||| | || |||||||||||||||||||    
T  4048423 ttaaaggacttatgtgtaaccaaaataacttaaatgatcaatctgttacaaatcttaaacctaaaagatttatgtgtcaccaaaataacttaaaaaccaa 4048522  T
Q  427 t 427  Q
    |    
T  4048523 t 4048523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 480
Target Start/End: Complemental strand, 30662284 - 30662188
Alignment:
Q  385 aacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    ||||||||| ||||||| | | |||||||| |||||  | |||||||||||||| || || |||||| ||||| ||||| |||||||||||||||||    
T  30662284 aacttaaagacttatgtgtaattaaaataatttaaatgatcaatctgttataaatctcaaacttaaaggacttatgtgtaatcaaaataacttaaaa 30662188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 42312850 - 42312759
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||| ||| ||| || || |||||| ||||| ||||||| ||||||||||||||  | |||||| |||||||||| ||||||||||||    
T  42312850 accaatctattacaaatctcaaacttaaaggacttatgtgtgaccaaaataacttaaatgaccaatatattacaaacctcaaacttaaagga 42312759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 524
Target Start/End: Original strand, 11975659 - 11975791
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    ||||||| |||| |||||||||||||  ||||||| |||| |||||| || |||||| ||||| | ||| |  |||||||||||||  | |||| ||||     
T  11975659 cttatgtgtgacaaaaataacttaaaggaccaatcagttacaaacctcaaacttaaaggacttatctgttacaaaaataacttaaaggaccaatctgttt 11975758  T
Q  492 caaaccttaaacttaaaggatccttagtataat 524  Q
    |||| || |||||||||||| ||||| ||||||    
T  11975759 caaatctcaaacttaaaggacccttaatataat 11975791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 27280879 - 27280944
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||| ||||||| |||| ||||||||||||| || | || ||||||||||| ||||||||||||    
T  27280879 ttaaagtacttatgtgtgaccaaaataacttaaagggtcaagctgttacaaacctcaaacttaaag 27280944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 455
Target Start/End: Original strand, 29710530 - 29710659
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 425  Q
    ||||| |||||||| ||||  |||||||||||| |||  |||| ||||||||  ||||||||||| | ||||||| | || |||||||| ||||| ||||    
T  29710530 ttaaatgacttatgtgtgacgaaaataacttaaaggaccaatccgttacaaatctcaaacttaaatgacttatgtgttaccaaaataacctaaaagacca 29710629  T
Q  426 atctgttataaaccttaagcttaaatgact 455  Q
    |||||||| |||| | || |||||| ||||    
T  29710630 atctgttacaaacgtcaaacttaaaggact 29710659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 30662222 - 30662157
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| || |||||||||||||||  || ||||||||||| ||||| ||| ||||||    
T  30662222 ttaaaggacttatgtgtaatcaaaataacttaaaagactaatctgttacgaactttaaatttaaag 30662157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 31453052 - 31453117
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||  ||||||||||||   | ||||||||||||||| ||||||||||||    
T  31453052 ttaaaggacttatgtgtgacaaaaataacttaaataactaatctgttacaaacctcaaacttaaag 31453117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 4048269 - 4048205
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||| ||||||| |||| ||||||||||||| | |||| ||| |||||||| |||||||||||    
T  4048269 ttaaagaacttatgtgtgaccaaaataacttaaagaattagtctattacaaacctcaaacttaaa 4048205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 6694657 - 6694534
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-acca 425  Q
    |||||||||||||| || | ||||||||||||| |||| ||||| ||||||||  |||||||||| | |||||||  ||  |||||||||||||| ||||    
T  6694657 ttaaaggacttatgtgtaa-caaaataacttaaaggatcaatctattacaaaccacaaacttaaaggacttatgtgggaacaaaataacttaaaagacca 6694559  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    || | ||| |||||| || ||||||    
T  6694558 atttattacaaacctcaaacttaaa 6694534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 432
Target Start/End: Original strand, 11975653 - 11975757
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaat 427  Q
    |||||||||||| ||||  |||||||||||| |||  |||| ||||||||| ||||||||||| | ||||| | | || |||||||||||||  ||||||    
T  11975653 aaaggacttatgtgtgacaaaaataacttaaaggaccaatcagttacaaacctcaaacttaaaggacttatctgttacaaaaataacttaaaggaccaat 11975752  T
Q  428 ctgtt 432  Q
    |||||    
T  11975753 ctgtt 11975757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 27280827 - 27280946
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    ||||||| | || |||||||||||||  | |||| |||||| ||||| || ||||||  |||| ||||||| ||||||||||||||   ||||  |||||    
T  27280827 cttatgtgttaccaaaataacttaaaggatcaatttgttatgaacctcaaacttaaagtacttatgtgtgaccaaaataacttaaagggtcaagctgtta 27280926  T
Q  492 caaaccttaaacttaaagga 511  Q
    ||||||| ||||||||||||    
T  27280927 caaacctcaaacttaaagga 27280946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 511
Target Start/End: Original strand, 30869631 - 30869737
Alignment:
Q  408 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 504  Q
    |||||||||||||  |||||||||||| |||||| || ||||||  |||| ||| ||| ||||||||||||||  | ||||   |||||||||| |||||    
T  30869631 aaaataacttaaaggaccaatctgttacaaacctcaaacttaaagaacttatgtatgaccaaaataacttaaaggaccaatcaattacaaacctcaaact 30869730  T
Q  505 taaagga 511  Q
    |||||||    
T  30869731 taaagga 30869737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 40951853 - 40951918
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 508  Q
    ||||||||| || ||||||| ||||||||||||||  |||||| | |||||||||| |||||||||    
T  40951853 cttaaatgatttatgtgtgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 41666238 - 41666204
Alignment:
Q  477 aaaatcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||||||||||||||||| ||||||||||||    
T  41666238 aaaatcaatatgttacaaacctcaaacttaaagga 41666204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 42313061 - 42313127
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| ||||||||||| || |||| |  ||||||||||| ||||||||||||    
T  42313061 ttaaaggacttatgtgtgaccaaaataacttaaaaggatcagcctgttacaaacgtcaaacttaaag 42313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 389
Target Start/End: Complemental strand, 3198256 - 3198219
Alignment:
Q  352 ataacttaatggattaatctgttacaaacttcaaactt 389  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  3198256 ataacttaaaggatcaatctgttacaaacttcaaactt 3198219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 42312826 - 42312761
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| |||||||||||||  ||  ||| | |||||||| ||||||||||||    
T  42312826 ttaaaggacttatgtgtgaccaaaataacttaaatgaccaatatattacaaacctcaaacttaaag 42312761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 40951854 - 40951918
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    ||||| || ||||| |||| |||||||||||||  ||| ||||| |||||||| |||||||||||    
T  40951854 ttaaatgatttatgtgtgaccaaaataacttaaatgatcaatctattacaaacctcaaacttaaa 40951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 421
Target Start/End: Original strand, 42313007 - 42313095
Alignment:
Q  334 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaa 421  Q
    |||||||| |||| |||||||| |||| |||  ||| |||||||||  ||||| ||||||  ||||||| |||| ||||||||||||||    
T  42313007 gacttatgtgtgaccaaaataatttaaaggaccaatttgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaaa 42313095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 4e-21; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 26879611 - 26879735
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaa-aacca 425  Q
    ||||||||| |||  |||||||||||||||||| |||| |||||||| |||||||||||||| |||| ||||||| |||  |||||||||||||  ||||    
T  26879611 ttaaaggacatatatgtgatcaaaataacttaaaggatcaatctgtttcaaacttcaaacttaaaagacttatgtgtgataaaaataacttaaatgacca 26879710  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||||||| |||||| || ||||||    
T  26879711 atctgttacaaacctcaaacttaaa 26879735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 7490026 - 7489933
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||| ||||| |||| |||||||||||||  |||||||||||||||||| ||||||||||| | ||||||| |||||||||||| |||||    
T  7490026 ttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacctcaaacttaaaggacttatgtgtgactaaaataatttaaa 7489933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 511
Target Start/End: Original strand, 40892532 - 40892636
Alignment:
Q  409 aaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaactta 506  Q
    ||||||||||||  ||||||||||| |||||| ||  ||||| ||||| ||||||| ||||||||||||||  ||||||||||||||||||| ||||| |    
T  40892532 aaataacttaaagtccaatctgttacaaacctcaaatttaaaggacttatgtgtgaccaaaataacttaaatgatcaatatgttacaaacctcaaactca 40892631  T
Q  507 aagga 511  Q
    |||||    
T  40892632 aagga 40892636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 450
Target Start/End: Complemental strand, 1173142 - 1173075
Alignment:
Q  383 caaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaa 450  Q
    ||||||||||| ||||||| |||| |||||||||||||||| |||||||||||||||| || ||||||    
T  1173142 caaacttaaagacttatgtgtgaccaaaataacttaaaaactaatctgttataaacctcaaacttaaa 1173075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 508
Target Start/End: Complemental strand, 7490071 - 7489902
Alignment:
Q  343 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaacct 440  Q
    |||| |||||||| |||| |||| ||||| |||||||| ||||||||||| |  |||||| |||| |||||||||||||  |  ||||||||| ||||||    
T  7490071 gtgaccaaaataatttaaaggatcaatctattacaaacctcaaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacct 7489972  T
Q  441 taagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 508  Q
     || |||||| ||||| |||||||  ||||||| |||||  |||||| | | |||||||| |||||||||    
T  7489971 caaacttaaaggacttatgtgtgactaaaataatttaaatgatcaatctctcacaaacctcaaacttaaa 7489902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 52913096 - 52913034
Alignment:
Q  330 aaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||| ||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  52913096 aaaggatttatgtgtgaccaaaataacttaaaggactaatctgttacaaacttcaaacttaaa 52913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 18608705 - 18608640
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||| | |||| ||||||||||||| | || |||||||||||||| ||||||||||||    
T  18608705 ttaaaggacttaagtgtgaccaaaataacttaaagaatcaatctgttacaaacctcaaacttaaag 18608640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 18608789 - 18608913
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||   |||||||||||||||||   || |||||||||||||| |||||| |||| | ||||||| |||  |||||| ||||||  || |    
T  18608789 ttaaaggacttatctatgatcaaaataacttaaaatatcaatctgttacaaacatcaaacgtaaacgacttatgtgtgatcaaaatagcttaaaggacaa 18608888  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    || ||||||||||||||| ||||||    
T  18608889 atttgttataaaccttaaacttaaa 18608913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 510
Target Start/End: Complemental strand, 6314397 - 6314295
Alignment:
Q  407 taaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaactta 506  Q
    |||||||||||||| |  ||||||||| |||| |||| |||||| ||||| |||||||  ||||||| |||| |  ||| |||||||||||| |||||||    
T  6314397 taaaataacttaaacattaatctgttacaaactttaaacttaaa-gacttatgtgtgaaaaaaataatttaagacaaatctgttacaaacctcaaactta 6314299  T
Q  507 aagg 510  Q
    ||||    
T  6314298 aagg 6314295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 511
Target Start/End: Original strand, 26879632 - 26879738
Alignment:
Q  408 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 504  Q
    |||||||||||||  | |||||||||  |||| | || |||||| ||||| |||||||| |||||||||||||  | |||| |||||||||||| |||||    
T  26879632 aaaataacttaaaggatcaatctgtttcaaacttcaaacttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgttacaaacctcaaact 26879731  T
Q  505 taaagga 511  Q
    |||||||    
T  26879732 taaagga 26879738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 33650531 - 33650398
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 479  Q
    |||||||||||  |||| || |||| ||||||||||||||  |||||| ||||| | |||  || |||||||||||| |||| || ||||||||||||||    
T  33650531 caaacttaaaggacttacgtgtgaccaaaataacttaaaaggaccaatatgttacataccacaaacttaaatgacttatgtgggaacaaaataacttaaa 33650432  T
Q  480 --atcaatatgttacaaaccttaaacttaaagga 511  Q
      | |||| ||||| |||||| ||||||||||||    
T  33650431 ggaccaatctgttataaacctcaaacttaaagga 33650398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 479
Target Start/End: Complemental strand, 52913272 - 52913173
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgtt-ataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 479  Q
    |||||||||||  ||||||| |||||| |||||||||||  ||||||||||| | |||||| || |||||| ||||| ||||||| ||||||||||||||    
T  52913272 caaacttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtttacaaacctcaaacttaaaggacttatgtgtgaccaaaataacttaaa 52913173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 6314382 - 6314297
Alignment:
Q  364 attaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaa 450  Q
    ||||||||||||||||||| |||||||||| ||||||| |||  ||||||| || || || ||||||||| |||||| || ||||||    
T  6314382 attaatctgttacaaactttaaacttaaagacttatgtgtgaaaaaaataa-tttaagacaaatctgttacaaacctcaaacttaaa 6314297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 511
Target Start/End: Complemental strand, 7490048 - 7489959
Alignment:
Q  424 caatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||| |||||| || |||||| || || ||||||| ||||||||||||||  || ||| |||||||||||| ||||||||||||    
T  7490048 caatctattacaaacctcaaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgttacaaacctcaaacttaaagga 7489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 52913267 - 52913173
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctg-ttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| ||||  | |||||||||| |||  |||||| |||||||| ||||||||||| | ||||||| |||| |||||||||||||    
T  52913267 ttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtttacaaacctcaaacttaaaggacttatgtgtgaccaaaataacttaaa 52913173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 18204930 - 18204991
Alignment:
Q  453 acttgtgtgtgatcaaaataa-cttaaaatcaatatgttacaaaccttaaacttaaaggatc 513  Q
    |||| ||||||| |||||||| || |||||||||||||||||||||| ||||||||| ||||    
T  18204930 acttatgtgtgaccaaaataatctaaaaatcaatatgttacaaacctcaaacttaaaagatc 18204991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 18608706 - 18608638
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| |||||  |||||| ||||||||||||||  |||||| |||||||||||| ||||||||||||    
T  18608706 cttaaaggacttaagtgtgaccaaaataacttaaagaatcaatctgttacaaacctcaaacttaaagga 18608638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 26879671 - 26879736
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| ||||| ||||||||||||  ||  |||||||||||||| ||||||||||||    
T  26879671 ttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgttacaaacctcaaacttaaag 26879736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 33650671 - 33650736
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| | || |||| |||||||| |||| |||||||||| ||| ||||||||||||    
T  33650671 ttaaaggacttatgtgggaacaaagtaacttaaaggatcaatctgttacgaacctcaaacttaaag 33650736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 34173385 - 34173320
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||  || | ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  34173385 ttaaaggacttatttgtaaccaaaataacttaaaggaccaatctgttacaaacatcaaacttaaag 34173320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 40892569 - 40892634
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| |||||||||||||  ||| ||| |||||||||| ||||||| ||||    
T  40892569 ttaaaggacttatgtgtgaccaaaataacttaaatgatcaatatgttacaaacctcaaactcaaag 40892634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 508
Target Start/End: Original strand, 18608810 - 18608913
Alignment:
Q  408 aaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaact 504  Q
    |||||||||||||| | |||||||||| |||| | || | |||| ||||| ||||||||||||||| ||||||  |  ||| ||||| ||||||||||||    
T  18608810 aaaataacttaaaatatcaatctgttacaaacatcaaacgtaaacgacttatgtgtgatcaaaatagcttaaaggacaaatttgttataaaccttaaact 18608909  T
Q  505 taaa 508  Q
    ||||    
T  18608910 taaa 18608913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 511
Target Start/End: Original strand, 40892512 - 40892576
Alignment:
Q  448 aaatgacttgtgtgtgatcaaaataacttaaaat-caatatgttacaaaccttaaacttaaagga 511  Q
    ||||||||| ||||||||| |||||||||||| | |||| |||||||||||| ||| ||||||||    
T  40892512 aaatgacttatgtgtgatcgaaataacttaaagtccaatctgttacaaacctcaaatttaaagga 40892576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 514
Target Start/End: Original strand, 50727597 - 50727712
Alignment:
Q  403 tgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatg-acttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaacct 498  Q
    ||||||||||||||||||| || ||||||||| |||||||||  ||||| | |||| |||| ||  |||||||||||||  |  ||| ||||| ||||||    
T  50727597 tgactaaaataacttaaaagacaaatctgttacaaaccttaaatttaaaaggacttatgtgcgactaaaataacttaaatgacaaatttgttagaaacct 50727696  T
Q  499 taaacttaaaggatcc 514  Q
     |||||||||||||||    
T  50727697 caaacttaaaggatcc 50727712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 509
Target Start/End: Original strand, 18204931 - 18205045
Alignment:
Q  395 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaa 494  Q
    ||||||| |||| |||||||  |||||| |||| ||||| |||||| || |||||| ||  | ||| |||  |||||||||||||| |||| | ||||||    
T  18204931 cttatgtgtgaccaaaataatctaaaaatcaatatgttacaaacctcaaacttaaaagatctatgtatgactaaaataacttaaaaacaatctattacaa 18205030  T
Q  495 accttaaacttaaag 509  Q
    | |||||||| ||||    
T  18205031 atcttaaactgaaag 18205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 2633366 - 2633431
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||  |||||||||||| | |  ||| |||||||||| ||||||||||||    
T  2633366 ttaaaggacttatgcgtgacaaaaataacttaaagaacaaatatgttacaaacctcaaacttaaag 2633431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 33650465 - 33650400
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| | || ||||||||||||| |||  ||||||||| |||| ||||||||||||    
T  33650465 ttaaatgacttatgtgggaacaaaataacttaaaggaccaatctgttataaacctcaaacttaaag 33650400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 33650526 - 33650401
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacc 424  Q
    |||||||||||| | |||| ||||||||||| || |||  ||| ||||||| ||  |||||||||| | |||||||  ||  |||||||||||||  |||    
T  33650526 ttaaaggacttacgtgtgaccaaaataacttaaaaggaccaatatgttacataccacaaacttaaatgacttatgtgggaacaaaataacttaaaggacc 33650427  T
Q  425 aatctgttataaaccttaagcttaaa 450  Q
    |||||||||||||||| || ||||||    
T  33650426 aatctgttataaacctcaaacttaaa 33650401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 33650619 - 33650738
Alignment:
Q  395 cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgtta 491  Q
    |||||||  ||| |||||||||||||  |||||||| ||| |||||  ||  ||||| ||||| |||| || |||| |||||||||  |||||| |||||    
T  33650619 cttatgtgagaccaaaataacttaaaggaccaatctcttacaaaccacaaagttaaaggacttatgtgggaacaaagtaacttaaaggatcaatctgtta 33650718  T
Q  492 caaaccttaaacttaaagga 511  Q
    | ||||| ||||||||||||    
T  33650719 cgaacctcaaacttaaagga 33650738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 52913160 - 52913065
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctg-ttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| |||| || ||||||||||  ||  |||||| |||||||| |||||||||||  |  |||||| |||| |||||||||||||    
T  52913160 ttaaaggacttatgtgtgaccagaataacttaaatgaccaatctgtttacaaacctcaaacttaaaaggatttatgtgtgaccaaaataacttaaa 52913065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 41083181 - 41083088
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| |||||||||||||||||| |||  ||| |||||||||||||||||||||| | ||||| | |||| |||||||||||||    
T  41083181 ttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacttcaaacttaaaggacttatatgtgacaaaaataacttaaa 41083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 45038386 - 45038510
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| |||| ||||||||||||| |||  |||||||||||||| ||||||||||| | ||||| | |||| |||||||||||||  ||||    
T  45038386 ttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatttgtgacaaaaataacttaaatgacca 45038485  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||| ||| |||||| || ||||||    
T  45038486 atctattacaaacctcaaacttaaa 45038510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 445 - 508
Target Start/End: Complemental strand, 2788013 - 2787950
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaa 508  Q
    |||||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  2788013 cttaaatgacttatgtgtgaccaaaataacttaaaacaaatatgttacaaaccttaaacttaaa 2787950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 524
Target Start/End: Complemental strand, 41083186 - 41083041
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||  |||||||||||||  |||||| ||||| |||| | || |||||| ||||| | |||||  |||||||||||||     
T  41083186 caaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgttacaaacttcaaacttaaaggacttatatgtgacaaaaataacttaaat 41083087  T
Q  480 -atcaatatgttacaaaccttaaacttaaaggatccttagtataat 524  Q
     ||||||||||||||||||| |||||||||||| || |||||||||    
T  41083086 gatcaatatgttacaaacctcaaacttaaaggacccctagtataat 41083041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 479
Target Start/End: Complemental strand, 53863449 - 53863351
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa 479  Q
    |||||||||||  ||||||| ||||||||||||||||||  |||||||||||| ||| ||  | |||||||||||| ||||||||||||||||||||||    
T  53863449 caaacttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgttacaaatctcgaacttaaatgacttatgtgtgatcaaaataacttaaa 53863351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 41083259 - 41083391
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| ||||  ||||||||||||| ||||||||||||  ||||| || |||||||||| | | ||||| ||||||||||||||     
T  41083259 caaacttaaaggacttatgtgtgaccgaaataacttaaaagaccaatctgttacgaacctcaaacttaaatgacatatatgtgaccaaaataacttaaag 41083358  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||||| ||||||||||||    
T  41083359 gaccaatctgttacaaacctcaaacttaaagga 41083391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 45038381 - 45038515
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||| |||||||||||||  |||||||||||| |||||| || |||||| ||||| | |||||  |||||||||||||     
T  45038381 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatttgtgacaaaaataacttaaat 45038480  T
Q  480 -atcaatatgttacaaaccttaaacttaaaggatc 513  Q
     | |||| | |||||||||| ||||||||||||||    
T  45038481 gaccaatctattacaaacctcaaacttaaaggatc 45038515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 509
Target Start/End: Original strand, 2788102 - 2788229
Alignment:
Q  385 aacttaaagtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--at 481  Q
    ||||||| | ||||| |||||| ||||| |||||||  | |||| | ||| ||||||||| |||||| || || ||||||| ||||||||||||||  ||    
T  2788102 aacttaaggacttatctctgaccaaaatgacttaaaggatcaattttttacaaaccttaaacttaaaggatttatgtgtgaccaaaataacttaaaatat 2788201  T
Q  482 caatatgttacaaaccttaaacttaaag 509  Q
    |||| |||||||||||| ||||||||||    
T  2788202 caatttgttacaaacctcaaacttaaag 2788229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 511
Target Start/End: Complemental strand, 7246159 - 7245992
Alignment:
Q  348 caaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagc 445  Q
    |||||| |||||| |||| |||||||||||||  | ||||||||| | ||||||| | || |||||||||||||  |||||| ||||| |||  | || |    
T  7246159 caaaattacttaaaggatcaatctgttacaaatataaaacttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaaac 7246060  T
Q  446 ttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||| ||||| ||| ||| ||||||||||||||  |||||  |||||||||| | ||||||||||||    
T  7246059 ttaaaggacttatgtctgaccaaaataacttaaaggatcaacctgttacaaacgtcaaacttaaagga 7245992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 440
Target Start/End: Complemental strand, 12592297 - 12592193
Alignment:
Q  337 ttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaaaaccaatctgttata 435  Q
    ||||| |||| |||||||||||||  ||| ||||||||||||| |||||||  |||   ||||||| | || |||||||||||||||||||||||||| |    
T  12592297 ttatgtgtgaccaaaataacttaaatgatcaatctgttacaaatttcaaacacaaataacttatgtttaaccaaaataacttaaaaaccaatctgttaca 12592198  T
Q  436 aacct 440  Q
    |||||    
T  12592197 aacct 12592193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 513
Target Start/End: Original strand, 7246229 - 7246363
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    |||||||||||| ||||||| |||  |||||||  |||| ||||||||| ||  ||| || || |||||| ||||| ||| ||| |||||||||||||||    
T  7246229 caaacttaaagtacttatgtgtgataaaaataaactaaagaaccaatctattccaaatctcaaacttaaaggacttatgtatgaccaaaataacttaaaa 7246328  T
Q  481 t--caatatgttacaaaccttaaacttaaaggatc 513  Q
       ||||||||||||||||| ||||||||||||||    
T  7246329 gaccaatatgttacaaacctcaaacttaaaggatc 7246363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 53863528 - 53863622
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa--gtcttatgtctgactaaaataacttaaa 420  Q
    ||||||||||||||  ||| ||||||||||||| |||  ||| |||||||| | |||||||||||  | ||||||| ||||||||||||||||||    
T  53863528 ttaaaggacttatgcatgaccaaaataacttaaaggaccaatttgttacaaccctcaaacttaaaaggacttatgtgtgactaaaataacttaaa 53863622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 480
Target Start/End: Original strand, 44057273 - 44057367
Alignment:
Q  387 cttaaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    ||||||| ||||||| ||||||||||||||||||  |||||| | ||| ||| || || |||||||||||| ||||| | |||||||||||||||    
T  44057273 cttaaagacttatgtatgactaaaataacttaaatgaccaatttattacaaatctcaaacttaaatgacttatgtgtaaccaaaataacttaaaa 44057367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 7246059 - 7245994
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||||  ||| ||||||||||||| |||| || ||||||||||| ||||||||||||    
T  7246059 ttaaaggacttatgtctgaccaaaataacttaaaggatcaacctgttacaaacgtcaaacttaaag 7245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 7246119 - 7246026
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| || | |||||||||||||  ||  ||| |||||||||  ||||||||||| | |||||||||||| |||||||||||||    
T  7246119 ttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgttacaaatatcaaacttaaaggacttatgtctgaccaaaataacttaaa 7246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 12498830 - 12498923
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||||||| |||| | |||||| |||| |||||| |||||||||||  ||||||||||| | ||||||| ||| ||||||||||||||    
T  12498830 ttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaa 12498923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 12498890 - 12498955
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||| ||||||||||||  ||| ||||| |||||||| ||||||||||||    
T  12498890 ttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaag 12498955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 17232055 - 17231990
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| |||||||| ||||||||||||||||||  || | ||||||||||||| ||||||||||||    
T  17232055 ttaaaagacttatgtgtgatcaaaataacttaaaagacttatctgttacaaacctcaaacttaaag 17231990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 41083264 - 41083388
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| |||| | |||||||||||  ||  |||||||||| ||| ||||||||||| | | ||| | |||| |||||||||||||  ||||    
T  41083264 ttaaaggacttatgtgtgaccgaaataacttaaaagaccaatctgttacgaacctcaaacttaaatgacatatatgtgaccaaaataacttaaaggacca 41083363  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||||||| |||||| || ||||||    
T  41083364 atctgttacaaacctcaaacttaaa 41083388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 477
Target Start/End: Complemental strand, 2788017 - 2787923
Alignment:
Q  383 caaacttaaa-gtcttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataactta 477  Q
    |||||||||| | ||||||| |||| |||||||||||||| | ||| ||||| ||||||||| |||||||||||| ||||  | ||||||||||||    
T  2788017 caaacttaaatgacttatgtgtgaccaaaataacttaaaa-caaatatgttacaaaccttaaacttaaatgacttatgtgcaaccaaaataactta 2787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 511
Target Start/End: Original strand, 12498871 - 12498957
Alignment:
Q  427 tctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||||| ||| || || |||||| ||||| |||||||| |||||||||||||  |||||| | |||||||||| ||||||||||||    
T  12498871 tctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 12498957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 11884707 - 11884615
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||||||| |||||| || |||||| ||||| |||||||  |||||||||||||   || ||| |||||||||||| ||| ||||||||    
T  11884707 accaatctgttacaaacctcaaacttaaaggacttatgtgtgacaaaaataacttaaaaggattaatttgttacaaacctcaaatttaaagga 11884615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 418
Target Start/End: Original strand, 46196349 - 46196419
Alignment:
Q  349 aaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactta 418  Q
    |||||||||||||||   |||||||||||||| ||||||||||| | ||||||| |||| |||||||||||    
T  46196349 aaaataacttaatggtccaatctgttacaaacctcaaacttaaaggacttatgtatgacaaaaataactta 46196419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 390 - 511
Target Start/End: Original strand, 2470121 - 2470245
Alignment:
Q  390 aaagtcttatgtctgactaaaataacttaaa-aaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaata 486  Q
    |||| ||||||| |||| |||||||||||||  |||||| | ||| |||||| ||  ||||| ||||| | ||||| ||||||||||||||  | ||||     
T  2470121 aaagacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaatttaaaggacttatatgtgaccaaaataacttaaaggaccaatc 2470220  T
Q  487 tgttacaaaccttaaacttaaagga 511  Q
    | |||||||||||||||| ||||||    
T  2470221 tattacaaaccttaaactgaaagga 2470245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 9999356 - 9999291
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||||| || ||| ||| |||| |||||||||||||| ||| ||||||||    
T  9999356 ttaaaggacttatgtgtgatcagaacaacctaaaggataaatctgttacaaacctcagacttaaag 9999291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 40147078 - 40146986
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagt-cttatgtctgactaaaataacttaaa 420  Q
    |||||||||| ||| |||| ||||||||| ||| |||| ||||| |||||||| |||||||| |||  ||||||| |||| |||||||||||||    
T  40147078 ttaaaggactcatgtgtgaccaaaataacctaa-ggatcaatctattacaaacctcaaacttcaaggacttatgtgtgaccaaaataacttaaa 40146986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 455
Target Start/End: Original strand, 40147172 - 40147301
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag-tcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||  ||||  |||||||||||| || | ||| |||||||||| ||||||||||||  ||||||| |||| ||||  |||||||  ||||    
T  40147172 ttaaaggacttatatgtgagaaaaataacttaaagggtcaatttgttacaaacctcaaacttaaagaacttatgtgtgaccaaaacgacttaaatgacca 40147271  T
Q  426 atctgttataaaccttaagcttaaatgact 455  Q
    || | |||||||||| || |||||| ||||    
T  40147272 atttattataaacctcaaacttaaaggact 40147301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 50290236 - 50290183
Alignment:
Q  458 tgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||||| ||||||||||||||| |||| ||| |||||||| ||||||||||||    
T  50290236 tgtgtgaccaaaataacttaaaaccaatttgtaacaaacctcaaacttaaagga 50290183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 53863444 - 53863351
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| ||||  |||||||||||| |||  |||||||||||||  || |||||||| | ||||||| |||  |||||||||||||    
T  53863444 ttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgttacaaatctcgaacttaaatgacttatgtgtgatcaaaataacttaaa 53863351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 440
Target Start/End: Complemental strand, 12498747 - 12498632
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaaa--acc 424  Q
    |||||||| ||||| |||| |||||||||||||  ||| ||| | || ||||| | |||||| |||| ||||||| |||| ||||||||||||||  |||    
T  12498747 ttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaaggacc 12498648  T
Q  425 aatctgttataaacct 440  Q
    ||||| ||| ||||||    
T  12498647 aatctattacaaacct 12498632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 450
Target Start/End: Original strand, 12592400 - 12592524
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataactt-aaaaacca 425  Q
    ||||| ||||||||  ||| ||| |||||||||  ||| ||||| |||||||||||||||||||| | || || | |||||||||||| || ||||| ||    
T  12592400 ttaaaagacttatgtatgaccaatataacttaaaagatcaatctattacaaacttcaaacttaaaggactaatatgtgactaaaataaattaaaaaatca 12592499  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    || | |||||||||| || ||||||    
T  12592500 atttattataaacctcaaacttaaa 12592524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 511
Target Start/End: Original strand, 21322016 - 21322107
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||||| ||| |||||| || |||||| ||||| | ||||| ||||||||||||||  |  ||| |||||||||||| ||||||||||||    
T  21322016 accaatcttttacaaacctcaaacttaaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaacctcaaacttaaagga 21322107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 509
Target Start/End: Original strand, 24684257 - 24684321
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaatcaatatgttacaaaccttaaacttaaag 509  Q
    |||||| ||||| |||||||   ||||||||||||| |||| |||||||||||| ||||||||||    
T  24684257 cttaaaggacttatgtgtgactgaaataacttaaaaccaatctgttacaaacctcaaacttaaag 24684321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 443
Target Start/End: Original strand, 2470124 - 2470235
Alignment:
Q  334 gacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aaccaatctgt 431  Q
    |||||||| |||| ||||||||||||| |||  ||| | |||||||| ||||| ||||| | ||||| | |||| |||||||||||||  |||||||| |    
T  2470124 gacttatgtgtgaccaaaataacttaaaggaccaatatattacaaacctcaaatttaaaggacttatatgtgaccaaaataacttaaaggaccaatctat 2470223  T
Q  432 tataaaccttaa 443  Q
    || |||||||||    
T  2470224 tacaaaccttaa 2470235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 511
Target Start/End: Complemental strand, 9999407 - 9999289
Alignment:
Q  396 ttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagc-ttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttac 492  Q
    |||||| |||| || ||||||||||||||||| ||||| |||| | || | ||||| ||||| |||||||||| || ||| ||||  || ||| ||||||    
T  9999407 ttatgtgtgaccaatataacttaaaaaccaatatgttagaaacatcaaactttaaaggacttatgtgtgatcagaacaacctaaaggataaatctgttac 9999308  T
Q  493 aaaccttaaacttaaagga 511  Q
    |||||| | ||||||||||    
T  9999307 aaacctcagacttaaagga 9999289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 421
Target Start/End: Complemental strand, 11884704 - 11884649
Alignment:
Q  367 aatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa 421  Q
    |||||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||    
T  11884704 aatctgttacaaacctcaaacttaaaggacttatgtgtgacaaaaataacttaaaa 11884649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 511
Target Start/End: Original strand, 24684266 - 24684382
Alignment:
Q  395 cttatgtctgactaaaataacttaaaaaccaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttac 492  Q
    ||||||| ||||| ||||||||||||| ||||||||||| |||||| || ||||||  ||||  |||| ||| ||||||||||||  | |||| | |||     
T  24684266 cttatgtgtgactgaaataacttaaaa-ccaatctgttacaaacctcaaacttaaagaacttacgtgtaatc-aaataacttaaaagaccaatctattat 24684363  T
Q  493 aaaccttaaacttaaagga 511  Q
    |||||| ||||||||||||    
T  24684364 aaacctcaaacttaaagga 24684382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 11884683 - 11884617
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataactt-aatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||  |||||||||| || |||||||| |||||||||| ||||| ||||||    
T  11884683 ttaaaggacttatgtgtgacaaaaataacttaaaaggattaatttgttacaaacctcaaatttaaag 11884617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 508
Target Start/End: Complemental strand, 12498748 - 12498683
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaa 508  Q
    |||||| || || ||||||| |||||||||||||||  ||||||| || |||||||||||||||||    
T  12498748 cttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaa 12498683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 40395309 - 40395367
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaa 386  Q
    |||||||||||||| ||||   ||||||||||| ||| ||||||||||||||| |||||    
T  40395309 ttaaaggacttatgtgtgacagaaataacttaaaggactaatctgttacaaacctcaaa 40395367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 41083339 - 41083389
Alignment:
Q  343 gtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||| ||||||||||||| |||  |||||||||||||| ||||||||||||    
T  41083339 gtgaccaaaataacttaaaggaccaatctgttacaaacctcaaacttaaag 41083389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 505
Target Start/End: Complemental strand, 45038337 - 45038252
Alignment:
Q  422 accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaa--aatcaatatgttacaaaccttaaactt 505  Q
    |||||||||||||||| || || |||||| ||||| ||||||| | |||||||||||   | |||| ||||| |||||||||||||    
T  45038337 accaatctgttataaatctcaaacttaaaggacttatgtgtgaccgaaataacttaacggaccaatctgttataaaccttaaactt 45038252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 382
Target Start/End: Complemental strand, 51950597 - 51950543
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaactt 382  Q
    |||||||||||||| |||| |||||||||||||  ||| |||||| |||||||||    
T  51950597 ttaaaggacttatgtgtgaccaaaataacttaaaagatcaatctgctacaaactt 51950543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 2469966 - 2469901
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||| | |||| ||||||||||||| | |  ||||| |||||||| ||||||||||||    
T  2469966 ttaaaggacttaggtgtgaccaaaataacttaaagaaccaatctattacaaacctcaaacttaaag 2469901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 2788164 - 2788229
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||| ||||| |||| |||||||||||||   || ||| |||||||||| ||||||||||||    
T  2788164 ttaaaggatttatgtgtgaccaaaataacttaaaatatcaatttgttacaaacctcaaacttaaag 2788229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 7246294 - 7246359
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||||||||||||  ||| |||||||||||||  ||  ||| |||||||||| ||||||||||||    
T  7246294 ttaaaggacttatgtatgaccaaaataacttaaaagaccaatatgttacaaacctcaaacttaaag 7246359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 480
Target Start/End: Complemental strand, 12498738 - 12498653
Alignment:
Q  396 ttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    |||||| |||| |||||||||||||| | |||| | ||  ||||||||| |||||| ||||| |||||||  ||||||||||||||    
T  12498738 ttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaa 12498653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 21322040 - 21322105
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||  |||| |||||||||||||  ||  ||| |||||||||| ||||||||||||    
T  21322040 ttaaaggacttatatgtgaccaaaataacttaaaagaaaaatgtgttacaaacctcaaacttaaag 21322105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 24369274 - 24369339
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||| | ||||  |||||||||||| |||  ||||| |||||||| ||||||||||||    
T  24369274 ttaaaggacttaggtgtgactaaaataacttaaaggacaaatctattacaaacctcaaacttaaag 24369339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Original strand, 26782502 - 26782570
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| ||||| | |||||  ||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  26782502 cttaaaagacttatatgtgacaaaaataacttaaaaaatcaatatattacaaacctcaaacttaaagga 26782570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 40395227 - 40395159
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    |||||| || || ||||||| ||||||||||||||  |  |||||||||||||||| ||||||||||||    
T  40395227 cttaaaagatttatgtgtgaccaaaataacttaaagaactaatatgttacaaacctcaaacttaaagga 40395159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 40395226 - 40395161
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    ||||| || ||||| |||| ||||||||||||| | | |||| |||||||||| ||||||||||||    
T  40395226 ttaaaagatttatgtgtgaccaaaataacttaaagaactaatatgttacaaacctcaaacttaaag 40395161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 41083121 - 41083056
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||  ||||  ||||||||||||  ||| ||| |||||||||| ||||||||||||    
T  41083121 ttaaaggacttatatgtgacaaaaataacttaaatgatcaatatgttacaaacctcaaacttaaag 41083056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 9999500 - 9999591
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaagtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||||||  ||||  ||||||||||||  ||  |||||||||||||| |||||||||||  || |||| |||| |||||||||||||    
T  9999500 ttaaatgacttatatgtgacaaaaataacttaaatgaccaatctgttacaaacctcaaacttaaa-actaatgtgtgaccaaaataacttaaa 9999591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 25055948 - 25055884
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa 392  Q
    |||||||| ||||| || | ||||||||||||| |||  ||||| |||||||| |||||||||||    
T  25055948 ttaaaggatttatgtgtcaccaaaataacttaaaggacaaatctattacaaacctcaaacttaaa 25055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 455
Target Start/End: Original strand, 25056151 - 25056235
Alignment:
Q  373 ttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgact 455  Q
    |||||||| ||||||||||| | ||| ||||| || |||||||||||||| |||||| ||||| |||||| || |||||| ||||    
T  25056151 ttacaaacctcaaacttaaatgacttttgtctcaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaaagact 25056235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 508
Target Start/End: Original strand, 25056155 - 25056230
Alignment:
Q  435 aaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 508  Q
    |||||| || |||||||||||| ||| | | ||||||||||||||  | |||| |||||||||||| |||||||||    
T  25056155 aaacctcaaacttaaatgacttttgtctcaccaaaataacttaaaagaccaatttgttacaaacctcaaacttaaa 25056230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 511
Target Start/End: Complemental strand, 45787154 - 45787023
Alignment:
Q  384 aaacttaaa-gtcttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaat 481  Q
    ||||||||| ||||||||| | || ||||||| |||||  | |||||||||| |||||| || | |||  ||||| ||||| | |||||||||||||||     
T  45787154 aaacttaaatgtcttatgtgtaaccaaaataagttaaatgatcaatctgttacaaacctcaaacgtaagggacttctgtgtaaccaaaataacttaaaag 45787055  T
Q  482 c--aatatgttacaaaccttaaacttaaagga 511  Q
    |  | ||||||||||| || ||||||||||||    
T  45787054 cctagtatgttacaaagctcaaacttaaagga 45787023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 508
Target Start/End: Original strand, 50290397 - 50290472
Alignment:
Q  435 aaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaa 508  Q
    |||||| || ||||||  |||| ||||||| ||||||||||||||  |||||| | |||||||||| |||||||||    
T  50290397 aaacctcaaacttaaaaaacttatgtgtgaccaaaataacttaaatgatcaatttattacaaacctcaaacttaaa 50290472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 455
Target Start/End: Original strand, 1145 - 1274
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| |||| ||||||||| ||| |||  |||| ||||||||  ||||||||||| | ||||||| |||| |||||||||||||  ||||    
T  1145 ttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaaggacca 1244  T
Q  426 atctgttataaaccttaagcttaaatgact 455  Q
    |||||||| |||| | || |||||| ||||    
T  1245 atctgttacaaacgtcaaacttaaaggact 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 1140 - 1272
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||| |||||||| ||||  ||||||| |||| |||  | || |||||||||||| ||||||| ||||||||||||||     
T  1140 caaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagttacaaatatcaaacttaaatgacttatgtgtgaccaaaataacttaaag 1239  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||| | ||||||||||||    
T  1240 gaccaatctgttacaaacgtcaaacttaaagga 1272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 511
Target Start/End: Complemental strand, 161536 - 161404
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||| ||||||| |||||  |||||||||||| ||| || || |||||| ||||| ||||||| |||||||| |||||     
T  161536 caaacttaaaggacttatgtgtgacaaaaataagttaaaggaccaatctgttacaaatctcaaacttaaaggacttatgtgtgaccaaaataagttaaag 161437  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     | |||| |||||||||||| ||||||||||||    
T  161436 gaccaatctgttacaaacctcaaacttaaagga 161404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 161675 - 161740
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| ||||||||||||| |||| ||||| |||||||| ||||||||||||    
T  161675 ttaaaggacttatgtgtgaccaaaataacttaaaggatcaatctattacaaacatcaaacttaaag 161740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 450
Target Start/End: Complemental strand, 161531 - 161407
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa-aacca 425  Q
    |||||||||||||| ||||  ||||||| |||| |||  |||||||||||||  ||||||||||| | ||||||| |||| ||||||| |||||  ||||    
T  161531 ttaaaggacttatgtgtgacaaaaataagttaaaggaccaatctgttacaaatctcaaacttaaaggacttatgtgtgaccaaaataagttaaaggacca 161432  T
Q  426 atctgttataaaccttaagcttaaa 450  Q
    |||||||| |||||| || ||||||    
T  161431 atctgttacaaacctcaaacttaaa 161407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 161471 - 161406
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| |||| |||||||| |||| |||  |||||||||||||| ||||||||||||    
T  161471 ttaaaggacttatgtgtgaccaaaataagttaaaggaccaatctgttacaaacctcaaacttaaag 161406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 161615 - 161708
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    |||||||||||||| |||| ||||||||| ||| |||  |||||||||||||  ||||| ||||| | ||||||| |||| |||||||||||||    
T  161615 ttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaa 161708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 511
Target Start/End: Original strand, 161610 - 161742
Alignment:
Q  383 caaacttaaagt-cttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa- 479  Q
    |||||||||||  ||||||| |||| |||||||| ||||  |||||||||||| |||  | ||  ||||| ||||| ||||||| ||||||||||||||     
T  161610 caaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgttacaaatatcaaatttaaaggacttatgtgtgaccaaaataacttaaag 161709  T
Q  480 -atcaatatgttacaaaccttaaacttaaagga 511  Q
     |||||| | |||||||| | ||||||||||||    
T  161710 gatcaatctattacaaacatcaaacttaaagga 161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000003; HSPs: 6)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 21587 - 21522
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaag 393  Q
    |||||||||||||| ||||| ||||||||||||  ||| ||||| |||||||| ||||||||||||    
T  21587 ttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaag 21522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 420
Target Start/End: Complemental strand, 21647 - 21554
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaa 420  Q
    ||||| |||||||| |||| | |||||| |||| |||||| |||||||||||  ||||||||||| | ||||||| ||| ||||||||||||||    
T  21647 ttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaa 21554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 511
Target Start/End: Complemental strand, 21606 - 21520
Alignment:
Q  427 tctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa--atcaatatgttacaaaccttaaacttaaagga 511  Q
    ||||||| ||| || || |||||| ||||| |||||||| |||||||||||||  |||||| | |||||||||| ||||||||||||    
T  21606 tctgttacaaatctcaaacttaaaggacttatgtgtgattaaaataacttaaatgatcaatctattacaaacctcaaacttaaagga 21520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 440
Target Start/End: Original strand, 21730 - 21845
Alignment:
Q  328 ttaaaggacttatgagtgatcaaaataacttaatggattaatctgttacaaacttcaaactt-aaagtcttatgtctgactaaaataacttaaaa--acc 424  Q
    |||||||| ||||| |||| |||||||||||||  ||| ||| | || ||||| | |||||| |||| ||||||| |||| ||||||||||||||  |||    
T  21730 ttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaaggacc 21829  T
Q  425 aatctgttataaacct 440  Q
    ||||| ||| ||||||    
T  21830 aatctattacaaacct 21845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 21729 - 21794
Alignment:
Q  445 cttaaatgacttgtgtgtgatcaaaataacttaaaa--tcaatatgttacaaaccttaaacttaaa 508  Q
    |||||| || || ||||||| |||||||||||||||  ||||||| || |||||||||||||||||    
T  21729 cttaaaggatttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaa 21794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 21739 - 21824
Alignment:
Q  396 ttatgtctgactaaaataacttaaaa-accaatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaaa 480  Q
    |||||| |||| |||||||||||||| | |||| | ||  ||||||||| |||||| ||||| |||||||  ||||||||||||||    
T  21739 ttatgtgtgaccaaaataacttaaaagatcaatatattgcaaaccttaaacttaaaagacttatgtgtgacaaaaataacttaaaa 21824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 509
Target Start/End: Original strand, 2430 - 2517
Alignment:
Q  425 aatctgttataaaccttaagcttaaatgacttgtgtgtgatcaaaataacttaaa---atcaatatgttacaaaccttaaacttaaag 509  Q
    ||||||||| |||||  || |||||||||||| ||||||| ||||||||||||||   | |||| | |||||||||| ||||||||||    
T  2430 aatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaag 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 450
Target Start/End: Original strand, 2427 - 2516
Alignment:
Q  364 attaatctgttacaaacttcaaacttaaa-gtcttatgtctgactaaaataacttaaaa--accaatctgttataaaccttaagcttaaa 450  Q
    |||||||||||||||||  |||||||||| | ||||||| |||  ||||||||||||||  |||||||| ||| |||||| || ||||||    
T  2427 attaatctgttacaaaccacaaacttaaatgacttatgtgtgaacaaaataacttaaaaggaccaatctattacaaacctcaaacttaaa 2516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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