View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18798_high_5 (Length: 263)
Name: NF18798_high_5
Description: NF18798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18798_high_5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 13982952 - 13982690
Alignment:
| Q |
1 |
tcatcaaaacatgtgctattgatttcactacataaaagattagattcagcactgtcaaagctttcagccattgaaagagaggttgattaaaagggtgcta |
100 |
Q |
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| T |
13982952 |
tcatcaaaacatgtgctattgttttcactacataaaagattagattcagcactgtcaaagctttcagccattgaaagagaggttgattaaaagggtgcta |
13982853 |
T |
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| Q |
101 |
ataatgaagcttcatgaaaaggggttattgnnnnnnnnnnnnnnnnnnnnnctttattgatgtggttagatgaaaaaattgaaatggcactggttgaaca |
200 |
Q |
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| T |
13982852 |
ataatgaaacttcatgaaaaggggttattgaaaaaagcttaaaaaacaaaactttattgatgtgattagatgaaaaaattgaaatggcactggttgaaca |
13982753 |
T |
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| Q |
201 |
tggaaagagagtgtgagagtgatgaaagatgaagaggtgtatgtaggaaatgggtttgtgtgt |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
13982752 |
tggaaagagagtgtgagagtgatgaaagatgaagaggtttatgtaggaaatgggtttgtgtgt |
13982690 |
T |
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