View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF18798_low_9 (Length: 234)

Name: NF18798_low_9
Description: NF18798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF18798_low_9
NF18798_low_9
[»] scaffold0662 (1 HSPs)
scaffold0662 (14-230)||(7363-7579)
[»] chr4 (12 HSPs)
chr4 (14-230)||(47028484-47028700)
chr4 (18-230)||(42063385-42063597)
chr4 (63-230)||(20135021-20135188)
chr4 (63-230)||(55917717-55917884)
chr4 (65-179)||(28682635-28682749)
chr4 (152-230)||(4922173-4922251)
chr4 (152-230)||(27295953-27296030)
chr4 (14-59)||(28682537-28682582)
chr4 (173-230)||(28682770-28682827)
chr4 (14-59)||(55917935-55917980)
chr4 (145-220)||(8407426-8407502)
chr4 (14-59)||(20134927-20134972)
[»] chr1 (9 HSPs)
chr1 (14-230)||(45320000-45320216)
chr1 (75-230)||(39242214-39242369)
chr1 (63-230)||(45346591-45346758)
chr1 (63-230)||(12983130-12983297)
chr1 (75-230)||(17015647-17015787)
chr1 (152-230)||(27289547-27289625)
chr1 (152-230)||(52382973-52383050)
chr1 (14-59)||(45346809-45346854)
chr1 (14-59)||(12983036-12983081)
[»] scaffold0166 (2 HSPs)
scaffold0166 (63-230)||(25423-25590)
scaffold0166 (14-59)||(25641-25686)
[»] chr8 (2 HSPs)
chr8 (63-230)||(533294-533461)
chr8 (14-59)||(533200-533245)
[»] chr7 (6 HSPs)
chr7 (63-230)||(45974033-45974200)
chr7 (88-230)||(29244900-29245042)
chr7 (85-230)||(34095412-34095550)
chr7 (152-230)||(19465106-19465184)
chr7 (152-230)||(29830600-29830678)
chr7 (14-59)||(45973939-45973984)
[»] chr5 (3 HSPs)
chr5 (63-230)||(24783040-24783207)
chr5 (152-230)||(30628350-30628428)
chr5 (14-59)||(24783258-24783303)
[»] chr2 (10 HSPs)
chr2 (63-230)||(15332339-15332506)
chr2 (63-230)||(16431476-16431643)
chr2 (63-230)||(37259998-37260165)
chr2 (63-230)||(17692219-17692386)
chr2 (93-230)||(14805900-14806037)
chr2 (152-230)||(14101634-14101712)
chr2 (14-59)||(15332243-15332288)
chr2 (14-59)||(17692125-17692170)
chr2 (14-59)||(16431382-16431427)
chr2 (14-59)||(37260214-37260259)
[»] chr3 (7 HSPs)
chr3 (63-230)||(39831528-39831695)
chr3 (111-230)||(15071377-15071496)
chr3 (152-230)||(22427089-22427167)
chr3 (152-230)||(50359837-50359915)
chr3 (152-230)||(50646983-50647061)
chr3 (14-59)||(39831744-39831789)
chr3 (75-116)||(15063752-15063793)
[»] chr6 (1 HSPs)
chr6 (152-230)||(12945318-12945396)
[»] scaffold0685 (1 HSPs)
scaffold0685 (152-230)||(6985-7062)


Alignment Details
Target: scaffold0662 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 7579 - 7363
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgaga 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7579 aagcatagctgctcctgattcaatctgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgaga 7480  T
Q  114 agaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtat 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  7479 agaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttgatttttgttcaataaagaagatgatgaaggtat 7380  T
Q  214 gaagatggtgatgatgt 230  Q
    |||||||||||||||||    
T  7379 gaagatggtgatgatgt 7363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 47028700 - 47028484
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgaga 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47028700 aagcatagctgctcctgattcaatctgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgaga 47028601  T
Q  114 agaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtat 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  47028600 agaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttgatttttgttcaataaagaagatgatgaaggtat 47028501  T
Q  214 gaagatggtgatgatgt 230  Q
    |||||||||||||||||    
T  47028500 gaagatggtgatgatgt 47028484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 42063597 - 42063385
Alignment:
Q  18 atagttgctcctgattcaatctgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaa 117  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42063597 atagctgctcctgattcaatatgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaa 42063498  T
Q  118 aatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaag 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  42063497 aatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttgatttttgttcaataaagaagatgatgaaggtatgaag 42063398  T
Q  218 atggtgatgatgt 230  Q
    |||||||||||||    
T  42063397 atggtgatgatgt 42063385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 20135021 - 20135188
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  20135021 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 20135120  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  20135121 atttgagtagttattttgttttttgttcaataaagaaaatgatgaaggtatgaagatggtgatgatgt 20135188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 55917884 - 55917717
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  55917884 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 55917785  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  55917784 atttgagtagttattttgttttttgttcaataaaaaagatgatgaaggtatgaagatggtgatgatgt 55917717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 28682635 - 28682749
Alignment:
Q  65 tccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgtat 164  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||| |||||||||| |||||    
T  28682635 tccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggaaatgaagaaaatattgagattcatattatttggagatgtat 28682734  T
Q  165 ttgagtagctatttt 179  Q
    ||||||| |||||||    
T  28682735 ttgagtatctatttt 28682749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 4922173 - 4922251
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||| ||||| ||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  4922173 tttgaaggtgaattagagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaacatggtgatgatgt 4922251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 27295953 - 27296030
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  |||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  27295953 tttggaggtgaattagagtagctattttgttttttgttcaataaagaa-atgatgaaggtatgaacatggtgatgatgt 27296030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 28682537 - 28682582
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  28682537 aagcatagctgctcctgattcaatctgtataattctgcaactaatc 28682582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 28682770 - 28682827
Alignment:
Q  173 ctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||  ||||| |||||||||||||||||| || |||| ||||||||||||||||    
T  28682770 ctattttgttttttattcaataaagaagatgattaaggtatcaagatggtgatgatgt 28682827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 55917980 - 55917935
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  55917980 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 55917935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 8407502 - 8407426
Alignment:
Q  145 catgttatttggaggtgtatttgagtagctatt-ttaatttttgttcaataaagaagatgatgaaagtatgaagatg 220  Q
    |||||||||||||||||||||| ||||   ||| ||| |||||||| || |||||||||||||||  ||||||||||    
T  8407502 catgttatttggaggtgtatttcagtaaacattattattttttgtttaagaaagaagatgatgaagatatgaagatg 8407426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 20134927 - 20134972
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  20134927 aagcatagctgctcttgatttaatctgtataattctgcaactaatc 20134972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 45320216 - 45320000
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgaga 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45320216 aagcatagctgctcctgattcaatctgtacaattctgcaactaatcgcatgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgaga 45320117  T
Q  114 agaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtat 213  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  45320116 agaaaatgaagatgaagataatattgagatttatgctatttggaggtgtatttgagtagctattttgatttttgttcaataaagaagatgatgaaggtat 45320017  T
Q  214 gaagatggtgatgatgt 230  Q
    |||||||||||||||||    
T  45320016 gaagatggtgatgatgt 45320000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 39242214 - 39242369
Alignment:
Q  75 gttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagct 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39242214 gttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagaaaatattgagattcatgttatttggaggtgtatttgagtagct 39242313  T
Q  175 attttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||  ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  39242314 attttgttttttgttcaataaagaagatgaagaatgtatgaagatggtgatgatgt 39242369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 45346758 - 45346591
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  45346758 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 45346659  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45346658 atttgagtagttattttattttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 45346591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 12983130 - 12983297
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  12983130 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 12983229  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12983230 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 12983297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 75 - 230
Target Start/End: Original strand, 17015647 - 17015787
Alignment:
Q  75 gttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagct 174  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||               |||||||||||||||||||||||||||||||||||||||    
T  17015647 gttggatttaaattagggtaattgactttcgtgttgagaagaaaat---------------attgagattcatgttatttggaggtgtatttgagtagct 17015731  T
Q  175 attttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17015732 attttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 17015787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 27289547 - 27289625
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    ||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  27289547 tttggaggtgattttgagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaatatggtgatgatgt 27289625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 52383050 - 52382973
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  |||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  52383050 tttggaggtgaattagagtagctattttgttttttgttcaataaagaa-atgatgaaggtatgaacatggtgatgatgt 52382973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 45346854 - 45346809
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||    
T  45346854 aagcatagttgctcttgattcaatctgtataattctgcaactaatc 45346809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 12983036 - 12983081
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  12983036 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 12983081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 25590 - 25423
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  25590 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 25491  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25490 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 25423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 25686 - 25641
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  25686 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 25641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 533294 - 533461
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  533294 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 533393  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  533394 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 533461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 533200 - 533245
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  533200 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 533245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 45974033 - 45974200
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  45974033 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 45974132  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45974133 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 45974200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 29244900 - 29245042
Alignment:
Q  88 tagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaatttttg 187  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||    
T  29244900 tagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgtatttgagtagttattttgttttttg 29244999  T
Q  188 ttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  29245000 ttcaataaaaaagatgatgaaggtatgaagatggtgatgatgt 29245042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 34095412 - 34095550
Alignment:
Q  85 aattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaattt 184  Q
    ||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  34095412 aattagggtaattgacttttgtgttgagaagaaaatggaaatgaaa-------tgagattcatgttatttgtaggtgtatttgagtagctattttgattt 34095504  T
Q  185 ttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  34095505 ttgttcaataaagaagatgatgaaggtatgaagatggtggtgatgt 34095550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 19465106 - 19465184
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  19465106 tttggaggtgaattagagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaacatagtgatgatgt 19465184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 29830678 - 29830600
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    ||||| |||| ||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  29830678 tttggtggtgaattagagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaacatggcgatgatgt 29830600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 45973939 - 45973984
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  45973939 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 45973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 24783207 - 24783040
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  24783207 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 24783108  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24783107 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 24783040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 30628350 - 30628428
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  30628350 tttggaggtgaatttgagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaacatggtgatgatgt 30628428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 24783303 - 24783258
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  24783303 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 24783258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 15332339 - 15332506
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  15332339 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 15332438  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15332439 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 15332506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 16431476 - 16431643
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  16431476 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 16431575  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16431576 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggtgatgatgt 16431643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 37260165 - 37259998
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  37260165 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 37260066  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  37260065 atttgagtagttattttgttttttgttcaataaagaagatgatgaacgtatgaagatggtgatgatgt 37259998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 17692219 - 17692386
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  17692219 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 17692318  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  17692319 atttgagtagttattttgttttttgttcaataaagaagatgatgaaggtatgaagatggcgatgatgt 17692386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 14806037 - 14805900
Alignment:
Q  93 taattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaatttttgttcaa 192  Q
    |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||    
T  14806037 taattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgtatttgagtagttattttgttttttgttcaa 14805938  T
Q  193 taaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||||||||| |||||||||||||||||||||    
T  14805937 taaagaagatgatgaaggtatgaagatggtgatgatgt 14805900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 14101634 - 14101712
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  14101634 tttggaggtgaattagagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaacatggtgatgatgt 14101712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 15332243 - 15332288
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  15332243 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 15332288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 17692125 - 17692170
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  17692125 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 17692170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 16431382 - 16431427
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| ||||||||| |||| ||||||||||||||||    
T  16431382 aagcatagctgctcttgattcaatatgtataattctgcaactaatc 16431427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 37260259 - 37260214
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| ||||||||| |||| ||||||||||||||||    
T  37260259 aagcatagctgctcttgattcaatatgtataattctgcaactaatc 37260214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 3e-66; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 39831695 - 39831528
Alignment:
Q  63 tgtccatcaagtgttggatttaaattagggtaattgacttttgtgttgagaagaaaatggagatgaagataatattgagattcatgttatttggaggtgt 162  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| |||    
T  39831695 tgtccatcaagagttggatttaaattagggtaattgacttttgtgttgattagaaaatggagatgaagaaaatattgagattcatgttatttggagatgt 39831596  T
Q  163 atttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  39831595 atttgagtagttattttgttttttgttcaataaagaaaatgatgaaggtatgaagatggtgatgatgt 39831528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 230
Target Start/End: Complemental strand, 15071496 - 15071377
Alignment:
Q  111 agaagaaaatggagatgaagataatattgagattcatgttatttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaag 210  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||   |||| |   ||||||| ||  | ||||||||||||      
T  15071496 agaagaaaatgaagatgaagataatgttgagattcatattatttggaggtgtatttgagtgattattatttcttttgtttaaggatgaagatgatgaaga 15071397  T
Q  211 tatgaagatggtgatgatgt 230  Q
    ||||||||||||||||||||    
T  15071396 tatgaagatggtgatgatgt 15071377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 22427167 - 22427089
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  22427167 tttggaggtgaattagagtagctattttgttttttgttcaataaaaaagatgatgaaagtatgaacatggtgatgatgt 22427089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 50359915 - 50359837
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  50359915 tttggaggtgaattagagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaacatggtgatgatgt 50359837  T

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Target: chr3; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 50647061 - 50646983
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  50647061 tttggaggtgaattagagtagctattttgttttttgttcaataaagaagatgatgaaggtatgaacatggtgatgatgt 50646983  T

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Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 39831789 - 39831744
Alignment:
Q  14 aagcatagttgctcctgattcaatctgtacaattctgcaactaatc 59  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||    
T  39831789 aagcatagctgctcttgattcaatctgtataattctgcaactaatc 39831744  T

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Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 15063793 - 15063752
Alignment:
Q  75 gttggatttaaattagggtaattgacttttgtgttgagaaga 116  Q
    |||||||||||||||||| |||||||||||| ||| ||||||    
T  15063793 gttggatttaaattaggggaattgacttttgagtttagaaga 15063752  T

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Target: chr6 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 12945318 - 12945396
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  12945318 tttggaggtgaatttgagtagctattttgttttctgttcaataaagaagatgatgaaggtatgaacatggtgatgatgt 12945396  T

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Target: scaffold0685 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 7062 - 6985
Alignment:
Q  152 tttggaggtgtatttgagtagctattttaatttttgttcaataaagaagatgatgaaagtatgaagatggtgatgatgt 230  Q
    |||||||||| ||| |||||||||||||  |||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  7062 tttggaggtgaattagagtagctattttgttttttgttcaataaagaa-atgatgaaggtatgaacatggtgatgatgt 6985  T

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