View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF18799_high_23 (Length: 230)
Name: NF18799_high_23
Description: NF18799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF18799_high_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 45644088 - 45643849
Alignment:
| Q |
1 |
aggactcatagaaggaaaaactcctctaaaggtggcaatcctggcgaactttaagtgccccctcataaatttaaaaggcaaccacgatattagaaacttt |
100 |
Q |
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| T |
45644088 |
aggactcttagaaggaaaaactcctctaaaggtggcaatcctggcgaactttaagggccccctcataaatttaaaaggcaaccacgatattagaaacttt |
45643989 |
T |
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| Q |
101 |
ctagttttgagcttc----------aataaggttttaaaataggaacctatgttttgatcgatgctcttagggataaattattaatgaccacataaatgg |
190 |
Q |
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| T |
45643988 |
ctagttttgagcttctttgagcttcaataaggttttaaaataggaacctatgttttgattgatgctcttagggataaattattaatgaccacataaatgg |
45643889 |
T |
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| Q |
191 |
caatgagaaaaatcggtagcacagcactcacagatatcat |
230 |
Q |
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| T |
45643888 |
caatgagaaaaatcggtagcacaacactcacagatatcat |
45643849 |
T |
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